From a71aae186e8e6b97fb3bd5ef7b6c54ffe4c3b8af Mon Sep 17 00:00:00 2001 From: Alex Lancaster Date: Sat, 9 Mar 2024 14:37:39 -0500 Subject: [PATCH] update to point to Front in Immunology paper - citation and DOI are available, while being typeset --- README.rst | 19 +++++++++++-------- website/index.rst | 8 ++++++-- 2 files changed, 17 insertions(+), 10 deletions(-) diff --git a/README.rst b/README.rst index 7670b822e..c86970d87 100644 --- a/README.rst +++ b/README.rst @@ -17,14 +17,17 @@ available in the `PyPop User Guide `__. If you write a paper that uses PyPop in your analysis, please cite **both**: -* our 2024 article, currently in review, available as a `Zenodo - preprint `__: - - Lancaster AK, Single RM, Mack SJ, Sochat V, Mariani MP, Webster - GD. (2024) "PyPop: A mature open-source software pipeline for - population genomics" (Preprint v1). Zenodo. - DOI:`10.5281/zenodo.10602940 - `__. +* our 2024 article, `provisionally accepted + `__ + in *Frontiers in Immunology*: + + Lancaster AK, Single RM, Mack SJ, Mariani MP. (2024) "PyPop: A + mature open-source software pipeline for population genomics." + *Front Immunol* **15**: doi: `10.3389/fimmu.2024.1378512 + `__ + + (while it is being typeset, the accepted manuscript can be + downloaded via `Zenodo `__) * **and** the `Zenodo record `__ for the software. To cite the correct version, follow these steps: diff --git a/website/index.rst b/website/index.rst index fa1f40941..5ccfaf409 100644 --- a/website/index.rst +++ b/website/index.rst @@ -23,7 +23,11 @@ large-scale population genetic analyses including: .. admonition:: PyPop News :class: dropdown, toggle-shown - + + * 2024-03-08: Latest PyPop paper, `provisionally accepted + `__ + in *Frontiers in Immunology*, :ref:`see citing PyPop + ` for details. * 2024-02-24: `PyPop 1.0.2 `__ released and available on `PyPI @@ -101,7 +105,7 @@ Although it can be run on any kind of genotype data, it has additional support for analyzing population genotype with allelic nomenclature from the human leukocyte antigen (HLA) region. -An outline of PyPop can be found in our 2024 preprint, and two +An outline of PyPop can be found in our 2024 paper, and two previous :ref:`papers `. .. _guide-preface-2-end: