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aliphysics.sh
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aliphysics.sh
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package: AliPhysics
version: "%(commit_hash)s"
tag: master
requires:
- AliRoot
- RooUnfold
- treelite
- KFParticle
- boost:(osx.*)
- ZeroMQ:(osx.*)
- "jemalloc:(?!osx.*)"
build_requires:
- "Xcode:(osx.*)"
source: https://github.com/alisw/AliPhysics
env:
ALICE_PHYSICS: "$ALIPHYSICS_ROOT"
prepend_path:
ROOT_INCLUDE_PATH: "$ALIPHYSICS_ROOT/include"
incremental_recipe: |
cmake --build . -- ${JOBS:+-j$JOBS} install
ctest -R load_library --output-on-failure ${JOBS:+-j $JOBS}
cp -v compile_commands.json ${INSTALLROOT}
DEVEL_SOURCES="$(readlink "$SOURCEDIR" || echo "$SOURCEDIR")"
if [[ $DEVEL_SOURCES != $SOURCEDIR ]]; then
sed -i.deleteme -e "s|$SOURCEDIR|$DEVEL_SOURCES|" compile_commands.json
rm -f compile_commands.json.deleteme
ln -nfs "$BUILDDIR/compile_commands.json" "$DEVEL_SOURCES/compile_commands.json"
fi
[[ $CMAKE_BUILD_TYPE == COVERAGE ]] && mkdir -p "$WORK_DIR/$ARCHITECTURE/profile-data/AliRoot/$ALIROOT_VERSION-$ALIROOT_REVISION/" && rsync -acv --filter='+ */' --filter='+ *.cpp' --filter='+ *.cc' --filter='+ *.h' --filter='+ *.gcno' --filter='- *' "$BUILDDIR/" "$WORK_DIR/$ARCHITECTURE/profile-data/AliRoot/$ALIROOT_VERSION-$ALIROOT_REVISION/"
mkdir -p $INSTALLROOT/etc/modulefiles && rsync -a --delete etc/modulefiles/ $INSTALLROOT/etc/modulefiles
---
#!/bin/bash -e
# Picking up ROOT from the system when ours is disabled
[[ -z "$ROOT_ROOT" ]] && ROOT_ROOT="$(root-config --prefix)"
# Uses the same setup as AliRoot
if [[ $CMAKE_BUILD_TYPE == COVERAGE ]]; then
source $ALIROOT_ROOT/etc/gcov-setup.sh
fi
# Use ninja if in devel mode, ninja is found and DISABLE_NINJA is not 1
if [[ ! $CMAKE_GENERATOR && $DISABLE_NINJA != 1 && $DEVEL_SOURCES != $SOURCEDIR ]]; then
NINJA_BIN=ninja-build
type "$NINJA_BIN" &> /dev/null || NINJA_BIN=ninja
type "$NINJA_BIN" &> /dev/null || NINJA_BIN=
# AliPhysics contains Fortran code, which requires at least ninja v1.10
# in order to build with ninja, otherwise the build must fall back to make
NINJA_VERSION_MAJOR=0
NINJA_VERSION_MINOR=0
if [ "x$NINJA_BIN" != "x" ]; then
NINJA_VERSION_MAJOR=$($NINJA_BIN --version | sed -e 's/.* //' | cut -d. -f1)
NINJA_VERSION_MINOR=$($NINJA_BIN --version | sed -e 's/.* //' | cut -d. -f2)
fi
NINJA_VERSION=$(($NINJA_VERSION_MAJOR * 100 + $NINJA_VERSION_MINOR))
[[ $NINJA_BIN && $NINJA_VERSION -ge 110 ]] && CMAKE_GENERATOR=Ninja || true
unset NINJA_BIN
fi
cmake "$SOURCEDIR" \
-DCMAKE_CXX_FLAGS_RELWITHDEBINFO="-Wno-error -g" \
-DCMAKE_INSTALL_PREFIX="$INSTALLROOT" \
-DCMAKE_EXPORT_COMPILE_COMMANDS=ON \
-DROOTSYS="$ROOT_ROOT" \
${CMAKE_GENERATOR:+-G "$CMAKE_GENERATOR"} \
${CMAKE_BUILD_TYPE:+-DCMAKE_BUILD_TYPE="$CMAKE_BUILD_TYPE"} \
${ALIEN_RUNTIME_ROOT:+-DALIEN="$ALIEN_RUNTIME_ROOT"} \
${FASTJET_ROOT:+-DFASTJET="$FASTJET_ROOT"} \
${ROOUNFOLD_ROOT:+-DROOUNFOLD="$ROOUNFOLD_ROOT"} \
${CGAL_ROOT:+-DCGAL="$CGAL_ROOT"} \
${MPFR_ROOT:+-DMPFR="$MPFR_ROOT"} \
${GMP_ROOT:+-DGMP="$GMP_ROOT"} \
${TREELITE_ROOT:+-DTREELITE_ROOT="$TREELITE_ROOT"} \
${ZEROMQ_ROOT:+-DZEROMQ="$ZEROMQ_ROOT"} \
${BOOST_ROOT:+-DBOOST_ROOT="$BOOST_ROOT"} \
-DALIROOT="$ALIROOT_ROOT"
cmake --build . -- ${IGNORE_ERRORS:+-k} ${JOBS+-j $JOBS} install
# ctest will succeed if no load_library tests were found
ctest -R load_library --output-on-failure ${JOBS:+-j $JOBS}
# Copy the compile commands in the installation and source directory (only if devel mode!)
cp -v compile_commands.json ${INSTALLROOT}
DEVEL_SOURCES="$(readlink "$SOURCEDIR" || echo "$SOURCEDIR")"
if [[ $DEVEL_SOURCES != $SOURCEDIR ]]; then
sed -i.deleteme -e "s|$SOURCEDIR|$DEVEL_SOURCES|" compile_commands.json
rm -f compile_commands.json.deleteme
ln -nfs "$BUILDDIR/compile_commands.json" "$DEVEL_SOURCES/compile_commands.json"
fi
[[ $CMAKE_BUILD_TYPE == COVERAGE ]] \
&& mkdir -p "$WORK_DIR/${ARCHITECTURE}/profile-data/AliRoot/$ALIROOT_VERSION-$ALIROOT_REVISION/" \
&& rsync -acv --filter='+ */' --filter='+ *.c' --filter='+ *.cxx' --filter='+ *.cpp' --filter='+ *.cc' --filter='+ *.hpp' --filter='+ *.h' --filter='+ *.gcno' --filter='- *' "$BUILDDIR/" "$WORK_DIR/${ARCHITECTURE}/profile-data/AliRoot/$ALIROOT_VERSION-$ALIROOT_REVISION/"
# Modulefile
mkdir -p etc/modulefiles
cat > etc/modulefiles/$PKGNAME <<EoF
#%Module1.0
proc ModulesHelp { } {
global version
puts stderr "ALICE Modulefile for $PKGNAME $PKGVERSION-@@PKGREVISION@$PKGHASH@@"
}
set version $PKGVERSION-@@PKGREVISION@$PKGHASH@@
module-whatis "ALICE Modulefile for $PKGNAME $PKGVERSION-@@PKGREVISION@$PKGHASH@@"
# Dependencies
module load BASE/1.0 AliRoot/$ALIROOT_VERSION-$ALIROOT_REVISION ${ROOUNFOLD_REVISION:+RooUnfold/$ROOUNFOLD_VERSION-$ROOUNFOLD_REVISION} ${TREELITE_REVISION:+treelite/$TREELITE_VERSION-$TREELITE_REVISION} ${KFPARTICLE_REVISION:+KFParticle/$KFPARTICLE_VERSION-$KFPARTICLE_REVISION} ${JEMALLOC_REVISION:+jemalloc/$JEMALLOC_VERSION-$JEMALLOC_REVISION}
# Our environment
setenv ALIPHYSICS_VERSION \$version
setenv ALIPHYSICS_RELEASE \$::env(ALIPHYSICS_VERSION)
set ALICE_PHYSICS \$::env(BASEDIR)/$PKGNAME/\$::env(ALIPHYSICS_RELEASE)
setenv ALICE_PHYSICS \$ALICE_PHYSICS
prepend-path PATH \$ALICE_PHYSICS/bin
prepend-path LD_LIBRARY_PATH \$ALICE_PHYSICS/lib
prepend-path ROOT_INCLUDE_PATH \$ALICE_PHYSICS/include
prepend-path ROOT_DYN_PATH \$ALICE_PHYSICS/lib
EoF
mkdir -p $INSTALLROOT/etc/modulefiles && rsync -a --delete etc/modulefiles/ $INSTALLROOT/etc/modulefiles