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Not installing with python 3.13 #86

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aflaus opened this issue Mar 22, 2025 · 1 comment
Open

Not installing with python 3.13 #86

aflaus opened this issue Mar 22, 2025 · 1 comment
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building Related to building the package external Issue comes from a dependency or some external code.

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@aflaus
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aflaus commented Mar 22, 2025

In a fresh Conda environment with python 3.13:

Could not solve for environment specs
The following packages are incompatible
├─ pin on python 3.13.* =* * is installable and it requires
│ └─ python =3.13 , which can be installed;└─ pyhmmer = * is not installable because there are no viable options
├─ pyhmmer [0.10.14|0.10.15|0.11.0] would require
│ └─ python >=3.10,<3.11.0a0 *, which conflicts with any installable versions previously reported;
├─ pyhmmer [0.10.14|0.10.15|0.11.0] would require
│ └─ python >=3.11,<3.12.0a0 *, which conflicts with any installable versions previously reported;
├─ pyhmmer [0.10.14|0.10.15|0.11.0] would require
│ └─ python >=3.12,<3.13.0a0 *, which conflicts with any installable versions previously reported;
├─ pyhmmer [0.10.14|0.10.15] would require
│ └─ python >=3.8,<3.9.0a0 *, which conflicts with any installable versions previously reported;
└─ pyhmmer [0.10.14|0.10.15|0.11.0] would require
└─ python >=3.9,<3.10.0a0 *, which conflicts with any installable versions previously reported.

Is it possible to update the build?

Thanks.

@althonos
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Unfortunately Bioconda does not yet support Python 3.13 (see FAQs):

Bioconda currently supports Python 3.8, 3.9, 3.10, 3.11, and 3.12 (see “pinned packages” below for where this is configured). There are still packages in the Bioconda channel for earlier versions of Python (2.7, 3.6, and 3.7), but new packages are not built for these versions.

You can always get the Python 3.13 wheel directly with pip install pyhmmer.

@althonos althonos added building Related to building the package external Issue comes from a dependency or some external code. labels Mar 25, 2025
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