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all_Make_steps.txt
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echo "---------------------------------------------------------------"
printf " Target is: output/fullsample/est_att/SNTH_est_att \n \n"
printf "The prerequisites for this target (output/fullsample/est_att/SNTH_est_att) are: \n analysis/est_att.R\n analysis/est_att_aux.R\n analysis/est_att.stan\n \n"
printf "The prerequisites newer than the target (output/fullsample/est_att/SNTH_est_att) are: \n analysis/est_att.R\n analysis/est_att_aux.R\n analysis/est_att.stan\n \n"
printf " Starting work on target: output/fullsample/est_att/SNTH_est_att \n\n"
Rscript analysis/est_att.R \
\
"data/SNTH_procdata.RData" \
\
"SNTH_est_att" \
"output/fullsample/est_att"
date > output/fullsample/est_att/SNTH_est_att
echo "---------------------------------------------------------------"
printf " Target is: output/fullsample/est_betatheta/SNTH_betadraws_att.RData \n \n"
printf "The prerequisites for this target (output/fullsample/est_betatheta/SNTH_betadraws_att.RData) are: \n output/fullsample/est_att/SNTH_est_att\n analysis/extract_betadraws_att.R\n \n"
printf "The prerequisites newer than the target (output/fullsample/est_betatheta/SNTH_betadraws_att.RData) are: \n output/fullsample/est_att/SNTH_est_att\n analysis/extract_betadraws_att.R\n \n"
printf " Starting work on target: output/fullsample/est_betatheta/SNTH_betadraws_att.RData \n\n"
Rscript analysis/extract_betadraws_att.R \
"fullsample" \
"output"
echo "---------------------------------------------------------------"
printf " Target is: output/fullsample/est_betatheta/SNTH_thetadraws_att \n \n"
printf "The prerequisites for this target (output/fullsample/est_betatheta/SNTH_thetadraws_att) are: \n output/fullsample/est_betatheta/SNTH_betadraws_att.RData\n analysis/extract_thetadraws_ji.R\n analysis/extract_thetadraws_j0.R\n \n"
printf "The prerequisites newer than the target (output/fullsample/est_betatheta/SNTH_thetadraws_att) are: \n output/fullsample/est_betatheta/SNTH_betadraws_att.RData\n analysis/extract_thetadraws_ji.R\n analysis/extract_thetadraws_j0.R\n \n"
printf " Starting work on target: output/fullsample/est_betatheta/SNTH_thetadraws_att \n\n"
Rscript analysis/extract_thetadraws_j0.R \
"output"
Rscript analysis/extract_thetadraws_ji.R \
"fullsample" \
"output"
date > output/fullsample/est_betatheta/SNTH_thetadraws_att
echo "---------------------------------------------------------------"
printf " Target is: output/fullsample/est_choice/SNTH_est_choice \n \n"
printf "The prerequisites for this target (output/fullsample/est_choice/SNTH_est_choice) are: \n output/fullsample/est_betatheta/SNTH_thetadraws_att\n analysis/est_choice.R\n analysis/est_choice_aux.R\n \n"
printf "The prerequisites newer than the target (output/fullsample/est_choice/SNTH_est_choice) are: \n output/fullsample/est_betatheta/SNTH_thetadraws_att\n analysis/est_choice.R\n analysis/est_choice_aux.R\n \n"
printf " Starting work on target: output/fullsample/est_choice/SNTH_est_choice \n\n"
Rscript analysis/est_choice.R \
"fullsample" \
"output"
date > output/fullsample/est_choice/SNTH_est_choice
echo "---------------------------------------------------------------"
printf " Target is: output/K12fold/est_att/SNTH_K12fold_est_att \n \n"
printf "The prerequisites for this target (output/K12fold/est_att/SNTH_K12fold_est_att) are: \n analysis/Kfold_split_procdata.R\n analysis/est_att.R\n analysis/est_att_aux.R\n analysis/est_att.stan\n \n"
printf "The prerequisites newer than the target (output/K12fold/est_att/SNTH_K12fold_est_att) are: \n analysis/Kfold_split_procdata.R\n analysis/est_att.R\n analysis/est_att_aux.R\n analysis/est_att.stan\n \n"
printf " Starting work on target: output/K12fold/est_att/SNTH_K12fold_est_att \n\n"
Rscript analysis/Kfold_split_procdata.R \
"output"
Rscript analysis/est_att.R \
\
"data/SNTH_procdata.RData" \
\
"SNTH_est_att" \
"output/fullsample/est_att"
date > output/K12fold/est_att/SNTH_K12fold_est_att
echo "---------------------------------------------------------------"
printf " Target is: output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta \n \n"
printf "The prerequisites for this target (output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta) are: \n output/K12fold/est_att/SNTH_K12fold_est_att\n analysis/extract_betadraws_att.R\n analysis/extract_thetadraws_ji.R\n analysis/extract_thetadraws_j0.R\n \n"
printf "The prerequisites newer than the target (output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta) are: \n output/K12fold/est_att/SNTH_K12fold_est_att\n analysis/extract_betadraws_att.R\n analysis/extract_thetadraws_ji.R\n analysis/extract_thetadraws_j0.R\n \n"
printf " Starting work on target: output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta \n\n"
Rscript analysis/extract_betadraws_att.R \
"K12fold" \
"output"
Rscript analysis/extract_thetadraws_ji.R \
"K12fold" \
"output"
date > output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta
echo "---------------------------------------------------------------"
printf " Target is: output/K12fold/pred_theta/SNTH_K12fold_pred_theta \n \n"
printf "The prerequisites for this target (output/K12fold/pred_theta/SNTH_K12fold_pred_theta) are: \n output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta\n analysis/Kfold_pred_att_theta_jigkq.R\n \n"
printf "The prerequisites newer than the target (output/K12fold/pred_theta/SNTH_K12fold_pred_theta) are: \n output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta\n analysis/Kfold_pred_att_theta_jigkq.R\n \n"
printf " Starting work on target: output/K12fold/pred_theta/SNTH_K12fold_pred_theta \n\n"
Rscript analysis/Kfold_pred_att_theta_jigkq.R \
"output"
date > output/K12fold/pred_theta/SNTH_K12fold_pred_theta
echo "---------------------------------------------------------------"
printf " Target is: output/K12fold/est_choice/SNTH_K12fold_est_choice \n \n"
printf "The prerequisites for this target (output/K12fold/est_choice/SNTH_K12fold_est_choice) are: \n output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta\n analysis/est_choice.R\n analysis/est_choice_aux.R\n \n"
printf "The prerequisites newer than the target (output/K12fold/est_choice/SNTH_K12fold_est_choice) are: \n output/K12fold/est_betatheta/SNTH_K12fold_est_betatheta\n analysis/est_choice.R\n analysis/est_choice_aux.R\n \n"
printf " Starting work on target: output/K12fold/est_choice/SNTH_K12fold_est_choice \n\n"
Rscript analysis/est_choice.R \
"K12fold" \
"output"
date > output/K12fold/est_choice/SNTH_K12fold_est_choice
echo "---------------------------------------------------------------"
printf " Target is: output/K12fold/pred_utility/SNTH_K12fold_pred_utility \n \n"
printf "The prerequisites for this target (output/K12fold/pred_utility/SNTH_K12fold_pred_utility) are: \n output/K12fold/pred_theta/SNTH_K12fold_pred_theta\n output/K12fold/est_choice/SNTH_K12fold_est_choice\n analysis/Kfold_pred_utility.R\n \n"
printf "The prerequisites newer than the target (output/K12fold/pred_utility/SNTH_K12fold_pred_utility) are: \n output/K12fold/pred_theta/SNTH_K12fold_pred_theta\n output/K12fold/est_choice/SNTH_K12fold_est_choice\n analysis/Kfold_pred_utility.R\n \n"
printf " Starting work on target: output/K12fold/pred_utility/SNTH_K12fold_pred_utility \n\n"
Rscript analysis/Kfold_pred_utility.R \
"output"
date > output/K12fold/pred_utility/SNTH_K12fold_pred_utility
echo "---------------------------------------------------------------"
printf " Target is: output/K12fold/pred_choice/SNTH_K12fold_pred_choice \n \n"
printf "The prerequisites for this target (output/K12fold/pred_choice/SNTH_K12fold_pred_choice) are: \n output/K12fold/pred_utility/SNTH_K12fold_pred_utility\n analysis/Kfold_pred_choice.R\n analysis/Kfold_pred_choice_aux.R\n \n"
printf "The prerequisites newer than the target (output/K12fold/pred_choice/SNTH_K12fold_pred_choice) are: \n output/K12fold/pred_utility/SNTH_K12fold_pred_utility\n analysis/Kfold_pred_choice.R\n analysis/Kfold_pred_choice_aux.R\n \n"
printf " Starting work on target: output/K12fold/pred_choice/SNTH_K12fold_pred_choice \n\n"
Rscript analysis/Kfold_pred_choice.R \
"output"
date > output/K12fold/pred_choice/SNTH_K12fold_pred_choice
echo "---------------------------------------------------------------"
printf " Target is: tables_and_figures.html \n \n"
printf "The prerequisites for this target (tables_and_figures.html) are: \n output/fullsample/est_choice/SNTH_est_choice\n output/K12fold/pred_choice/SNTH_K12fold_pred_choice\n analysis/tables_and_figures.Rmd\n analysis/tables_and_figures_aux.R\n \n"
printf "The prerequisites newer than the target (tables_and_figures.html) are: \n output/fullsample/est_choice/SNTH_est_choice\n output/K12fold/pred_choice/SNTH_K12fold_pred_choice\n \n"
printf " Starting work on target: tables_and_figures.html \n\n"
Rscript analysis/render_rmd.R \
analysis/tables_and_figures.Rmd