From f67286d1602c29b4c4de656572b0d9409908b7f6 Mon Sep 17 00:00:00 2001 From: matrulda Date: Wed, 21 Jun 2023 11:49:15 +0200 Subject: [PATCH 1/3] Update seqreports to dev version with novaseq x plus changes --- seqreports | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/seqreports b/seqreports index aa60649..29fddb4 160000 --- a/seqreports +++ b/seqreports @@ -1 +1 @@ -Subproject commit aa6064944e09a6fb6aee7caa67d9a8a20ee80185 +Subproject commit 29fddb4e1f401a506367727813c3ddf49147ee24 From 5d649d1ba7d01a61c002c65f065ff8648645df42 Mon Sep 17 00:00:00 2001 From: matrulda Date: Wed, 21 Jun 2023 12:32:17 +0200 Subject: [PATCH 2/3] Only run pytest, not tox and pylint --- .gitlab-ci.yml | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index b708e00..5f4755c 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -45,9 +45,7 @@ before_script: test: stage: test script: - - python setup.py test - - pip install tox pylint - - tox -e py37,pylint + - pytest tests/ build: stage: build From 291e0f0c9972604819f246952eabfee8d5038e54 Mon Sep 17 00:00:00 2001 From: Adrien Coulier Date: Mon, 3 Jul 2023 14:26:35 +0200 Subject: [PATCH 3/3] Update sphinx Update to 5.3, the last version available for Python 3.7 --- requirements_dev.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/requirements_dev.txt b/requirements_dev.txt index 08c1d92..7e9ed28 100644 --- a/requirements_dev.txt +++ b/requirements_dev.txt @@ -6,7 +6,7 @@ watchdog==0.9.0 flake8==3.5.0 tox==3.5.2 coverage==4.5.1 -Sphinx==1.8.1 +Sphinx==5.3.0 twine==1.12.1 pytest==3.8.2