Skip to content

Latest commit

 

History

History
90 lines (64 loc) · 5.8 KB

README.md

File metadata and controls

90 lines (64 loc) · 5.8 KB

data

Example of adding link to Google drive

  • Edit the markdown file
  • On Google drive, upload file, then create a globally readable link
  • Include the link in the markdown
  • Push updated markdown file, and any .png thumbnail images, to the repo
  • Test link from the repo
Link File Type Image File Size
nefetiti.obj obj nefertiti 3.5MB
T1_Utah_SCI.nii NIfTI T1_Utah_SCI 109.1MB
IXI661-HH-2788-T1.nii NIfTI IXI661 19.7MB
d2 e2 f2 g2

Common Data Models

Data sources, such as isosurfaces and meshes, either in repo (small files) or linked to Google drive (large files)

Name Image Size vertices faces/volumes
cube.stl cube 1 kB 8 12
sphere.stl sphere 4.2 MB 8,447 16,890
bunny.stl bunny 7.5 MB 14,290 28,576
igea.obj igea 9.6 MB 134,456 268,686
igea.stl igea 70.7 MB 134,456 268,686
igea.inp igea_hex igea_hex_msj 48 MB 330,175 312,752

T1 Utah SCI brain

See folder containing T1_Utah_SCI_brain in format npy, stl and T1_Utah_SCI_outer in npy, stl, T1_Utah_SCI.nii, and T1_Utah_SCI.yaml.

RMU source files

  • All_Hex_Dec.inp 212 MB (All-hexahedral created Dec 2021)
  • Subject D
    • Sushan's original work
    • 18 year old female
    • 10 .stl files total:
Name Image Size vertices faces/volumes
brainstem Aseg_dura_falx_tent_BS.stl Aseg_dura_falx_tent_BS 862 kB 8,626 17,248
midbrain Aseg_dura_falx_tent_MB.stl Aseg_dura_falx_tent_MB 3.6 MB 35,522 71,092
ventricles Aseg_dura_falx_tent_V.stl Aseg_dura_falx_tent_V 1.7 MB 17,174 34,328

2022-08-16: More to come.

Cubit>graphics perspective off  # orthogonal, not perspective view
Cubit>view iso # isometric x, y, z camera
Cubit>up 0 0 1  # z-axis points up

Simić brainstem

From GrabCAD

Brain (healthy), Slobodan Simić, April 2nd, 2019

Healthy human brain. Model shows complete brain with separated models for cerebellum, cerebrum, brain stem and corpus callosum. The model was segmented from MRI file downloaded at http://www.sci.utah.edu/sci-headmodel.html , model T1. "This project was supported by the National Institute of General Medical Sciences of the National Institutes of Health under grant number P41 GM103545-18."

Six files:

See Also

References:

metadata-orientation