examples/1.0-validate-snomed-code-in-valueset.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "from fhir_tx_client import SyncFHIRTerminologyClient\n",
    "from fhir_tx_client.data_types import SCTCoding"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Create a client\n",
    "client = SyncFHIRTerminologyClient(\"https://tx.fhir.org/r4/\")\n",
    "\n",
    "# load a ValueSet by id\n",
    "vs_food_type = client.ValueSet(id=\"modified-foodtype\")\n",
    "\n",
    "# Create coding based on SNOMED CT code\n",
    "eggs_code = SCTCoding.from_sct_code(\"102263004 |Eggs|\")\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "{'display': 'Eggs',\n",
       " 'system': 'http://snomed.info/sct',\n",
       " 'code': '102263004',\n",
       " 'result': True}"
      ]
     },
     "execution_count": 3,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "\n",
    "# Validate a code in a ValueSet\n",
    "vs_food_type.validate_code(coding=eggs_code)\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Bonus - do the same thing (code validation) but in a more pythonic way\n",
    "assert eggs_code in vs_food_type"
   ]
  }
 ],
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