diff --git a/README b/README index fc6b05d..38d71b3 100644 --- a/README +++ b/README @@ -1,73 +1,38 @@ -This PyCPPAD, a Python module to differentiate complex algorithms written in Python. -It wraps the functionality of the library CPPAD (C++). - -Authors: Sebastian F. Walter and Brad Bell - -Licence: BSD -* Copyright (c) 2008, Sebastian F. Walter -* All rights reserved. -* -* Redistribution and use in source and binary forms, with or without -* modification, are permitted provided that the following conditions are met: -* * Redistributions of source code must retain the above copyright -* notice, this list of conditions and the following disclaimer. -* * Redistributions in binary form must reproduce the above copyright -* notice, this list of conditions and the following disclaimer in the -* documentation and/or other materials provided with the distribution. -* * Neither the name of the HU Berlin nor the -* names of its contributors may be used to endorse or promote products -* derived from this software without specific prior written permission. -* -* THIS SOFTWARE IS PROVIDED BY Sebastian F. Walter ''AS IS'' AND ANY -* EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED -* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -* DISCLAIMED. IN NO EVENT SHALL Sebastian F. Walter BE LIABLE FOR ANY -* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES -* (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; -* LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND -* ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT -* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS -* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - - - -INSTALLATION: -============= -Requirements: - -* Python and Numpy, both with header files -* boost::python - -On Debian/Ubuntu this should work: -sudo apt-get install python python-dev python-numpy libboost-python-dev - -Rename the setup.py.example to setup.py and adapt it to your needs, -i.e. set the paths to CppAD, Boost and Python if you have installed it in a non-standard place. - -Build the extension. Below is a sample what it should look like: - - -RUN EXAMPLES: -============= -python examples/simple_examples.py - - -UNIT TESTS: -=========== -For that you need py.test - -Download from http://codespeak.net/py/dist/ -or sudo apt-get install python-codespeak-lib - -run with the following command -py.test unit_tests/general_test.py - - - - - - - - - - +------------------------------------------------------------------------------- +pycppad: Python Algorithmic Differentiation Using CppAD +Authors: Sebastian F. Walter and Bradley M. Bell. + +BSD style using http://www.opensource.org/licenses/bsd-license.php template +as it was on 2009-01-24 with the following substutions: + = 2008-2009 + = Bradley M. Bell and Sebastian F. Walter + = contributors' organizations +In addition, "Neither the name of the contributors' organizations" +was changed to "Neither the names of the contributors' organizations" +------------------------------------------------------------------------------- + +Copyright (c) 2008-2009, Bradley M. Bell and Seastian F. Walter +All rights reserved. + +Redistribution and use in source and binary forms, with or without modification, +are permitted provided that the following conditions are met: + + * Redistributions of source code must retain the above copyright notice, + this list of conditions and the following disclaimer. + * Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + * Neither the names of the contributors' organizations nor the names of + its contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. diff --git a/brad/.gitignore b/brad/.gitignore deleted file mode 100644 index bda9226..0000000 --- a/brad/.gitignore +++ /dev/null @@ -1,2 +0,0 @@ -lib* -*.tmp \ No newline at end of file diff --git a/brad/README b/brad/README deleted file mode 100644 index 38d71b3..0000000 --- a/brad/README +++ /dev/null @@ -1,38 +0,0 @@ -------------------------------------------------------------------------------- -pycppad: Python Algorithmic Differentiation Using CppAD -Authors: Sebastian F. Walter and Bradley M. Bell. - -BSD style using http://www.opensource.org/licenses/bsd-license.php template -as it was on 2009-01-24 with the following substutions: - = 2008-2009 - = Bradley M. Bell and Sebastian F. Walter - = contributors' organizations -In addition, "Neither the name of the contributors' organizations" -was changed to "Neither the names of the contributors' organizations" -------------------------------------------------------------------------------- - -Copyright (c) 2008-2009, Bradley M. Bell and Seastian F. Walter -All rights reserved. - -Redistribution and use in source and binary forms, with or without modification, -are permitted provided that the following conditions are met: - - * Redistributions of source code must retain the above copyright notice, - this list of conditions and the following disclaimer. - * Redistributions in binary form must reproduce the above copyright notice, - this list of conditions and the following disclaimer in the documentation - and/or other materials provided with the distribution. - * Neither the names of the contributors' organizations nor the names of - its contributors may be used to endorse or promote products derived from - this software without specific prior written permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" -AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE -IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE -FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL -DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR -SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER -CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, -OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE -OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. diff --git a/brad/build.sh b/build.sh similarity index 100% rename from brad/build.sh rename to build.sh diff --git a/brad/clean.sh b/clean.sh similarity index 100% rename from brad/clean.sh rename to clean.sh diff --git a/brad/doc.omh b/doc.omh similarity index 100% rename from brad/doc.omh rename to doc.omh diff --git a/brad/example/abs.py b/example/abs.py similarity index 100% rename from brad/example/abs.py rename to example/abs.py diff --git a/brad/example/ad.py 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b/pycppad/pycppad.cpp similarity index 100% rename from brad/pycppad/pycppad.cpp rename to pycppad/pycppad.cpp diff --git a/brad/pycppad/vec2array.cpp b/pycppad/vec2array.cpp similarity index 100% rename from brad/pycppad/vec2array.cpp rename to pycppad/vec2array.cpp diff --git a/brad/pycppad/vec2array.hpp b/pycppad/vec2array.hpp similarity index 100% rename from brad/pycppad/vec2array.hpp rename to pycppad/vec2array.hpp diff --git a/brad/pycppad/vector.cpp b/pycppad/vector.cpp similarity index 100% rename from brad/pycppad/vector.cpp rename to pycppad/vector.cpp diff --git a/brad/pycppad/vector.hpp b/pycppad/vector.hpp similarity index 100% rename from brad/pycppad/vector.hpp rename to pycppad/vector.hpp diff --git a/sebastian/README b/sebastian/README new file mode 100644 index 0000000..fc6b05d --- /dev/null +++ b/sebastian/README @@ -0,0 +1,73 @@ +This PyCPPAD, a Python module to differentiate complex algorithms written in Python. +It wraps the functionality of the library CPPAD (C++). + +Authors: Sebastian F. Walter and Brad Bell + +Licence: BSD +* Copyright (c) 2008, Sebastian F. Walter +* All rights reserved. +* +* Redistribution and use in source and binary forms, with or without +* modification, are permitted provided that the following conditions are met: +* * Redistributions of source code must retain the above copyright +* notice, this list of conditions and the following disclaimer. +* * Redistributions in binary form must reproduce the above copyright +* notice, this list of conditions and the following disclaimer in the +* documentation and/or other materials provided with the distribution. +* * Neither the name of the HU Berlin nor the +* names of its contributors may be used to endorse or promote products +* derived from this software without specific prior written permission. +* +* THIS SOFTWARE IS PROVIDED BY Sebastian F. Walter ''AS IS'' AND ANY +* EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED +* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +* DISCLAIMED. IN NO EVENT SHALL Sebastian F. Walter BE LIABLE FOR ANY +* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES +* (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; +* LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND +* ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT +* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS +* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + + + +INSTALLATION: +============= +Requirements: + +* Python and Numpy, both with header files +* boost::python + +On Debian/Ubuntu this should work: +sudo apt-get install python python-dev python-numpy libboost-python-dev + +Rename the setup.py.example to setup.py and adapt it to your needs, +i.e. set the paths to CppAD, Boost and Python if you have installed it in a non-standard place. + +Build the extension. Below is a sample what it should look like: + + +RUN EXAMPLES: +============= +python examples/simple_examples.py + + +UNIT TESTS: +=========== +For that you need py.test + +Download from http://codespeak.net/py/dist/ +or sudo apt-get install python-codespeak-lib + +run with the following command +py.test unit_tests/general_test.py + + + + + + + + + + diff --git a/SConstruct.EXAMPLE b/sebastian/SConstruct.EXAMPLE similarity index 100% rename from SConstruct.EXAMPLE rename to sebastian/SConstruct.EXAMPLE diff --git a/cppad-20081128/AUTHORS b/sebastian/cppad-20081128/AUTHORS similarity index 100% rename from cppad-20081128/AUTHORS rename to sebastian/cppad-20081128/AUTHORS diff --git a/cppad-20081128/COPYING b/sebastian/cppad-20081128/COPYING similarity index 100% rename from cppad-20081128/COPYING rename to sebastian/cppad-20081128/COPYING diff --git a/cppad-20081128/ChangeLog b/sebastian/cppad-20081128/ChangeLog similarity index 100% rename from cppad-20081128/ChangeLog rename to sebastian/cppad-20081128/ChangeLog diff --git a/cppad-20081128/INSTALL b/sebastian/cppad-20081128/INSTALL similarity index 100% rename from cppad-20081128/INSTALL rename to sebastian/cppad-20081128/INSTALL diff --git a/cppad-20081128/NEWS b/sebastian/cppad-20081128/NEWS similarity index 100% rename from cppad-20081128/NEWS rename to sebastian/cppad-20081128/NEWS diff --git a/cppad-20081128/README b/sebastian/cppad-20081128/README similarity index 100% rename from cppad-20081128/README rename to sebastian/cppad-20081128/README diff --git a/cppad-20081128/aclocal.m4 b/sebastian/cppad-20081128/aclocal.m4 similarity index 100% rename from cppad-20081128/aclocal.m4 rename to sebastian/cppad-20081128/aclocal.m4 diff --git a/cppad-20081128/build.sh b/sebastian/cppad-20081128/build.sh similarity index 100% rename from cppad-20081128/build.sh rename to sebastian/cppad-20081128/build.sh diff --git a/cppad-20081128/check_example.sh b/sebastian/cppad-20081128/check_example.sh similarity index 100% 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a/cppad-20081128/cppad/local/add_eq.hpp b/sebastian/cppad-20081128/cppad/local/add_eq.hpp similarity index 100% rename from cppad-20081128/cppad/local/add_eq.hpp rename to sebastian/cppad-20081128/cppad/local/add_eq.hpp diff --git a/cppad-20081128/cppad/local/add_op.hpp b/sebastian/cppad-20081128/cppad/local/add_op.hpp similarity index 100% rename from cppad-20081128/cppad/local/add_op.hpp rename to sebastian/cppad-20081128/cppad/local/add_op.hpp diff --git a/cppad-20081128/cppad/local/arithmetic.hpp b/sebastian/cppad-20081128/cppad/local/arithmetic.hpp similarity index 100% rename from cppad-20081128/cppad/local/arithmetic.hpp rename to sebastian/cppad-20081128/cppad/local/arithmetic.hpp diff --git a/cppad-20081128/cppad/local/asin_op.hpp b/sebastian/cppad-20081128/cppad/local/asin_op.hpp similarity index 100% rename from cppad-20081128/cppad/local/asin_op.hpp rename to sebastian/cppad-20081128/cppad/local/asin_op.hpp diff --git a/cppad-20081128/cppad/local/atan2.hpp b/sebastian/cppad-20081128/cppad/local/atan2.hpp similarity index 100% rename from cppad-20081128/cppad/local/atan2.hpp rename to sebastian/cppad-20081128/cppad/local/atan2.hpp diff --git a/cppad-20081128/cppad/local/atan_op.hpp b/sebastian/cppad-20081128/cppad/local/atan_op.hpp similarity index 100% rename from cppad-20081128/cppad/local/atan_op.hpp rename to sebastian/cppad-20081128/cppad/local/atan_op.hpp diff --git a/cppad-20081128/cppad/local/base_complex.hpp b/sebastian/cppad-20081128/cppad/local/base_complex.hpp similarity index 100% rename from cppad-20081128/cppad/local/base_complex.hpp rename to sebastian/cppad-20081128/cppad/local/base_complex.hpp diff --git a/cppad-20081128/cppad/local/bender_quad.hpp b/sebastian/cppad-20081128/cppad/local/bender_quad.hpp similarity index 100% rename from cppad-20081128/cppad/local/bender_quad.hpp rename to sebastian/cppad-20081128/cppad/local/bender_quad.hpp diff --git a/cppad-20081128/cppad/local/bool_fun.hpp 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a/cppad-20081128/cppad/local/mul_op.hpp b/sebastian/cppad-20081128/cppad/local/mul_op.hpp similarity index 100% rename from cppad-20081128/cppad/local/mul_op.hpp rename to sebastian/cppad-20081128/cppad/local/mul_op.hpp diff --git a/cppad-20081128/cppad/local/near_equal_ext.hpp b/sebastian/cppad-20081128/cppad/local/near_equal_ext.hpp similarity index 100% rename from cppad-20081128/cppad/local/near_equal_ext.hpp rename to sebastian/cppad-20081128/cppad/local/near_equal_ext.hpp diff --git a/cppad-20081128/cppad/local/omp_max_thread.hpp b/sebastian/cppad-20081128/cppad/local/omp_max_thread.hpp similarity index 100% rename from cppad-20081128/cppad/local/omp_max_thread.hpp rename to sebastian/cppad-20081128/cppad/local/omp_max_thread.hpp diff --git a/cppad-20081128/cppad/local/op.hpp b/sebastian/cppad-20081128/cppad/local/op.hpp similarity index 100% rename from cppad-20081128/cppad/local/op.hpp rename to sebastian/cppad-20081128/cppad/local/op.hpp diff --git a/cppad-20081128/cppad/local/op_code.hpp b/sebastian/cppad-20081128/cppad/local/op_code.hpp similarity index 100% rename from cppad-20081128/cppad/local/op_code.hpp rename to sebastian/cppad-20081128/cppad/local/op_code.hpp diff --git a/cppad-20081128/cppad/local/ordered.hpp b/sebastian/cppad-20081128/cppad/local/ordered.hpp similarity index 100% rename from cppad-20081128/cppad/local/ordered.hpp rename to sebastian/cppad-20081128/cppad/local/ordered.hpp diff --git a/cppad-20081128/cppad/local/output.hpp b/sebastian/cppad-20081128/cppad/local/output.hpp similarity index 100% rename from cppad-20081128/cppad/local/output.hpp rename to sebastian/cppad-20081128/cppad/local/output.hpp diff --git a/cppad-20081128/cppad/local/par_var.hpp b/sebastian/cppad-20081128/cppad/local/par_var.hpp similarity index 100% rename from cppad-20081128/cppad/local/par_var.hpp rename to sebastian/cppad-20081128/cppad/local/par_var.hpp diff --git a/cppad-20081128/cppad/local/player.hpp 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