Possibility to retrieve p-values?

[Joannavonberg]

Dear developers,

Thank you for your help in installing Intogen. I've been able to run it without problems! I do have some questions. I am wondering whether it is possible to retrieve the p-values for each gene, before they were converted to q-values. Furthermore, I know that some of the methods do their own filtering so it might not be possible, but ideally I would like to have a p-value for each gene (so also for those that were not significantly enriched for mutations). Is this already possible for the user, or is this something that could be added as an option to Intogen?

Best,
Joanna