From ab7db7f9daa25b10079ace68b968f80965cb429d Mon Sep 17 00:00:00 2001 From: schutzekatze Date: Wed, 13 Oct 2021 14:15:28 -0700 Subject: [PATCH] Update version --- ChangeLog | 10 ++++++++++ Misc/samtobreak.hs | 2 +- bin/abyss-pe | 2 +- configure.ac | 2 +- doc/ABYSS.1 | 2 +- doc/abyss-pe.1 | 2 +- doc/abyss-tofastq.1 | 2 +- 7 files changed, 16 insertions(+), 6 deletions(-) diff --git a/ChangeLog b/ChangeLog index dbad28bea..063079ff5 100644 --- a/ChangeLog +++ b/ChangeLog @@ -1,3 +1,13 @@ +2021-10-13 Vladimir Nikolic + + * Release version 2.3.2 + + General: + * Updated the `m` parameter and the `S` and `N` scaffolding parameters to better defaults. + + abyss-rresolver-short: + * Updated btllib to 1.1.7 + 2021-04-21 Vladimir Nikolic * Release version 2.3.1 diff --git a/Misc/samtobreak.hs b/Misc/samtobreak.hs index 8093def8d..862a37b15 100644 --- a/Misc/samtobreak.hs +++ b/Misc/samtobreak.hs @@ -279,7 +279,7 @@ parseArgs = do where help = putStr (usageInfo usage options) >> exitSuccess tryHelp = "Try 'abyss-samtobreak --help' for more information." - version = "abyss-samtobreak (ABySS) 2.3.1\n" + version = "abyss-samtobreak (ABySS) 2.3.2\n" usage = "Usage: samtobreak [OPTION]... [FILE]...\n\ \Calculate contig and scaffold contiguity and correctness metrics.\n" diff --git a/bin/abyss-pe b/bin/abyss-pe index 3f879d8a7..efb6d54df 100755 --- a/bin/abyss-pe +++ b/bin/abyss-pe @@ -414,7 +414,7 @@ help: @echo 'Report bugs to https://github.com/bcgsc/abyss/issues or abyss-users@bcgsc.ca.' version: - @echo "abyss-pe (ABySS) 2.3.1" + @echo "abyss-pe (ABySS) 2.3.2" @echo "Written by Shaun Jackman and Anthony Raymond." @echo @echo "Copyright 2012 Canada's Michael Smith Genome Science Centre" diff --git a/configure.ac b/configure.ac index 36f8910cb..92c24d483 100644 --- a/configure.ac +++ b/configure.ac @@ -1,5 +1,5 @@ AC_PREREQ(2.62) -AC_INIT(ABySS, 2.3.1, abyss-users@bcgsc.ca, abyss, +AC_INIT(ABySS, 2.3.2, abyss-users@bcgsc.ca, abyss, http://www.bcgsc.ca/platform/bioinfo/software/abyss) AC_CONFIG_MACRO_DIR([m4]) diff --git a/doc/ABYSS.1 b/doc/ABYSS.1 index b4977c19f..6aaa62f0e 100644 --- a/doc/ABYSS.1 +++ b/doc/ABYSS.1 @@ -1,4 +1,4 @@ -.TH ABYSS "1" "2015-May" "ABYSS (ABySS) 2.3.1" "User Commands" +.TH ABYSS "1" "2015-May" "ABYSS (ABySS) 2.3.2" "User Commands" .SH NAME ABYSS \- assemble short reads into contigs .SH SYNOPSIS diff --git a/doc/abyss-pe.1 b/doc/abyss-pe.1 index 4aafb92ae..969468a30 100644 --- a/doc/abyss-pe.1 +++ b/doc/abyss-pe.1 @@ -1,4 +1,4 @@ -.TH abyss-pe "1" "2015-May" "abyss-pe (ABySS) 2.3.1" "User Commands" +.TH abyss-pe "1" "2015-May" "abyss-pe (ABySS) 2.3.2" "User Commands" .SH NAME abyss-pe - assemble reads into contigs .SH SYNOPSIS diff --git a/doc/abyss-tofastq.1 b/doc/abyss-tofastq.1 index be9656434..93fc7aee6 100644 --- a/doc/abyss-tofastq.1 +++ b/doc/abyss-tofastq.1 @@ -1,4 +1,4 @@ -.TH abyss-tofastq "1" "2015-May" "ABySS 2.3.1" "User Commands" +.TH abyss-tofastq "1" "2015-May" "ABySS 2.3.2" "User Commands" .SH NAME abyss-tofastq \- convert various file formats to FASTQ format .br