diff --git a/README.md b/README.md index be71f78a5..9516a60d6 100644 --- a/README.md +++ b/README.md @@ -330,12 +330,11 @@ verbose logging enabled: At the current time, the user must calculate suitable values for `B` and `H` on their own, and finding the best value for `kc` may require experimentation (optimal values are typically in the range of 2-4). Internally, the Bloom filter -assembler divides the memory budget (`B`) equally across (`kc` + 1) Bloom -filters, where `kc` Bloom filters are used for the cascading Bloom filter and -one additional Bloom filter is used to track k-mers that have previously been -included in contigs. Users are recommended to target a Bloom filter false -positive rate (FPR) that is less than 5%, as reported by the assembly log when -using the `v=-v` option (verbose level 1). +assembler allocates the entire memory budget (`B`) to a Counting Bloom filter, +and an additional (`B/8`) memory to another Bloom filter that is used to track +k-mers that have previously been included in contigs. Users are recommended to +target a Bloom filter false positive rate (FPR) that is less than 5%, as reported +by the assembly log when using the `v=-v` option (verbose level 1). Assembling using a paired de Bruijn graph =========================================