From da2d0da486443da9b3d1e107fd495e274b709e90 Mon Sep 17 00:00:00 2001 From: schutzekatze Date: Wed, 21 Apr 2021 16:47:04 -0700 Subject: [PATCH] Update version --- ChangeLog | 8 ++++++++ Misc/samtobreak.hs | 2 +- bin/abyss-pe | 2 +- configure.ac | 2 +- doc/ABYSS.1 | 2 +- doc/abyss-pe.1 | 2 +- doc/abyss-tofastq.1 | 2 +- 7 files changed, 14 insertions(+), 6 deletions(-) diff --git a/ChangeLog b/ChangeLog index b9dce7f65..dbad28bea 100644 --- a/ChangeLog +++ b/ChangeLog @@ -1,3 +1,11 @@ +2021-04-21 Vladimir Nikolic + + * Release version 2.3.1 + + abyss-rresolver-short: + * Fixed a bug that crashed ABySS if Bloom filter size is not specified. + * Fixed a compilation error for clang-10. + 2021-03-22 Vladimir Nikolic * Release version 2.3.0 diff --git a/Misc/samtobreak.hs b/Misc/samtobreak.hs index a46beb273..8093def8d 100644 --- a/Misc/samtobreak.hs +++ b/Misc/samtobreak.hs @@ -279,7 +279,7 @@ parseArgs = do where help = putStr (usageInfo usage options) >> exitSuccess tryHelp = "Try 'abyss-samtobreak --help' for more information." - version = "abyss-samtobreak (ABySS) 2.3.0\n" + version = "abyss-samtobreak (ABySS) 2.3.1\n" usage = "Usage: samtobreak [OPTION]... [FILE]...\n\ \Calculate contig and scaffold contiguity and correctness metrics.\n" diff --git a/bin/abyss-pe b/bin/abyss-pe index f818eff3c..d90e99eac 100755 --- a/bin/abyss-pe +++ b/bin/abyss-pe @@ -398,7 +398,7 @@ help: @echo 'Report bugs to https://github.com/bcgsc/abyss/issues or abyss-users@bcgsc.ca.' version: - @echo "abyss-pe (ABySS) 2.3.0" + @echo "abyss-pe (ABySS) 2.3.1" @echo "Written by Shaun Jackman and Anthony Raymond." @echo @echo "Copyright 2012 Canada's Michael Smith Genome Science Centre" diff --git a/configure.ac b/configure.ac index 8ea538fae..6c9cbd2b4 100644 --- a/configure.ac +++ b/configure.ac @@ -1,5 +1,5 @@ AC_PREREQ(2.62) -AC_INIT(ABySS, 2.3.0, abyss-users@bcgsc.ca, abyss, +AC_INIT(ABySS, 2.3.1, abyss-users@bcgsc.ca, abyss, http://www.bcgsc.ca/platform/bioinfo/software/abyss) AC_CONFIG_MACRO_DIR([m4]) diff --git a/doc/ABYSS.1 b/doc/ABYSS.1 index 9ac76ec90..b4977c19f 100644 --- a/doc/ABYSS.1 +++ b/doc/ABYSS.1 @@ -1,4 +1,4 @@ -.TH ABYSS "1" "2015-May" "ABYSS (ABySS) 2.3.0" "User Commands" +.TH ABYSS "1" "2015-May" "ABYSS (ABySS) 2.3.1" "User Commands" .SH NAME ABYSS \- assemble short reads into contigs .SH SYNOPSIS diff --git a/doc/abyss-pe.1 b/doc/abyss-pe.1 index 959a88ac7..4aafb92ae 100644 --- a/doc/abyss-pe.1 +++ b/doc/abyss-pe.1 @@ -1,4 +1,4 @@ -.TH abyss-pe "1" "2015-May" "abyss-pe (ABySS) 2.3.0" "User Commands" +.TH abyss-pe "1" "2015-May" "abyss-pe (ABySS) 2.3.1" "User Commands" .SH NAME abyss-pe - assemble reads into contigs .SH SYNOPSIS diff --git a/doc/abyss-tofastq.1 b/doc/abyss-tofastq.1 index 20b0ba7ea..be9656434 100644 --- a/doc/abyss-tofastq.1 +++ b/doc/abyss-tofastq.1 @@ -1,4 +1,4 @@ -.TH abyss-tofastq "1" "2015-May" "ABySS 2.3.0" "User Commands" +.TH abyss-tofastq "1" "2015-May" "ABySS 2.3.1" "User Commands" .SH NAME abyss-tofastq \- convert various file formats to FASTQ format .br