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allow NewAntigenicLikelihood to use FastMatrixParameter BEAST CI #1042: Commit 913f15b pushed by msuchard
December 14, 2023 03:12 9m 15s hmc-clock
hmc-clock
December 14, 2023 03:12 9m 15s
infrastructure for coalescent gradient wrt parametric parameters BEAST CI #1041: Commit 837ffff pushed by msuchard
December 13, 2023 21:27 9m 22s hmc-clock
hmc-clock
December 13, 2023 21:27 9m 22s
better masking parsing BEAST CI #1040: Commit b6145ba pushed by msuchard
December 13, 2023 18:52 9m 15s hmc-clock
hmc-clock
December 13, 2023 18:52 9m 15s
Merge branch 'hmc-clock' of github.com:beast-dev/beast-mcmc into hmc-… BEAST CI #1039: Commit 1a1949c pushed by msuchard
December 13, 2023 18:05 9m 24s hmc-clock
hmc-clock
December 13, 2023 18:05 9m 24s
larger difference in test xml to avoid numeric instability more sever… BEAST CI #1038: Commit 12bbd6c pushed by xji3
December 13, 2023 17:35 9m 22s hmc-clock
hmc-clock
December 13, 2023 17:35 9m 22s
fix diagonal hessian calculation BEAST CI #1037: Commit 6adb443 pushed by xji3
December 13, 2023 17:33 4m 45s hmc-clock
hmc-clock
December 13, 2023 17:33 4m 45s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1036: Commit 7fe5300 pushed by xji3
December 13, 2023 02:28 4m 55s hmc-clock
hmc-clock
December 13, 2023 02:28 4m 55s
fix bug in name matching for antigenic cartography BEAST CI #1035: Commit 36496e1 pushed by msuchard
December 12, 2023 22:07 9m 24s hmc-clock
hmc-clock
December 12, 2023 22:07 9m 24s
remove broken test-unit BEAST CI #1034: Commit 0112f9f pushed by msuchard
December 12, 2023 18:37 12m 7s BigFastTreeModel
BigFastTreeModel
December 12, 2023 18:37 12m 7s
manual merge of hmc-clock -- BigFastTreeModel BEAST CI #1033: Commit 6c017de pushed by msuchard
December 12, 2023 18:08 12m 19s BigFastTreeModel
BigFastTreeModel
December 12, 2023 18:08 12m 19s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1032: Commit b299749 pushed by xji3
December 12, 2023 17:14 9m 26s hmc-clock
hmc-clock
December 12, 2023 17:14 9m 26s
move broken test-units BEAST CI #1031: Commit e396a6e pushed by msuchard
December 12, 2023 16:37 13m 13s BigFastTreeModel
BigFastTreeModel
December 12, 2023 16:37 13m 13s
fix some CI test-units BEAST CI #1030: Commit e1b8779 pushed by msuchard
December 12, 2023 16:06 11m 37s hmc-clock
hmc-clock
December 12, 2023 16:06 11m 37s
more caching BEAST CI #1029: Commit 4a4a594 pushed by msuchard
December 12, 2023 14:14 7m 37s BigFastTreeModel
BigFastTreeModel
December 12, 2023 14:14 7m 37s
clean out unnecessary code BEAST CI #1028: Commit 5ac0e18 pushed by msuchard
December 11, 2023 22:01 1m 3s BigFastTreeModel
BigFastTreeModel
December 11, 2023 22:01 1m 3s
initial infrastructure for BEAGLE-based BASTA BEAST CI #1027: Commit 2cb3c1b pushed by msuchard
December 11, 2023 21:59 57s BigFastTreeModel
BigFastTreeModel
December 11, 2023 21:59 57s
parallelize trans matrix comp in BASTA BEAST CI #1026: Commit 55c8cce pushed by msuchard
December 10, 2023 19:15 7m 15s BigFastTreeModel
BigFastTreeModel
December 10, 2023 19:15 7m 15s
first parallel task completed for BASTA BEAST CI #1025: Commit 7186919 pushed by msuchard
December 10, 2023 04:41 7m 52s BigFastTreeModel
BigFastTreeModel
December 10, 2023 04:41 7m 52s
clarify parallelization potential BEAST CI #1024: Commit 13df757 pushed by msuchard
December 9, 2023 17:35 7m 39s BigFastTreeModel
BigFastTreeModel
December 9, 2023 17:35 7m 39s
clean code BEAST CI #1023: Commit f3b481c pushed by msuchard
December 9, 2023 16:19 7m 46s BigFastTreeModel
BigFastTreeModel
December 9, 2023 16:19 7m 46s
solve first set of store/restore issues BEAST CI #1022: Commit c8b32fa pushed by msuchard
December 9, 2023 16:08 7m 53s BigFastTreeModel
BigFastTreeModel
December 9, 2023 16:08 7m 53s
first working version of vectorized BASTA BEAST CI #1021: Commit 7019ee5 pushed by msuchard
December 8, 2023 23:57 9m 57s BigFastTreeModel
BigFastTreeModel
December 8, 2023 23:57 9m 57s
use abs to compare small value.. BEAST CI #1020: Commit 8ea3451 pushed by xji3
December 7, 2023 20:42 9m 31s hmc-clock
hmc-clock
December 7, 2023 20:42 9m 31s
most of BASTA in parallelizable form BEAST CI #1019: Commit 2fc2f63 pushed by msuchard
December 7, 2023 15:41 7m 53s BigFastTreeModel
BigFastTreeModel
December 7, 2023 15:41 7m 53s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1018: Commit c81ca40 pushed by xji3
December 6, 2023 18:00 9m 9s hmc-clock
hmc-clock
December 6, 2023 18:00 9m 9s
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