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RELEASES_NOTES.md

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v1.2.0 [DEV]

Changes:

  • Increase execution speed.

v1.1.0 [2019-08-08]

New functions:

  • Add possibility to use scikit-learn parameters of the selected MIAmSClassifier.
  • Add check on number of samples supporting each class (MSI/MSS) of loci after model creation in MIAmS_learn.
  • Add buttons "select all" and "unselect all" loci in lengths distribution graph in HTML report.

Changes:

  • The default value for the parameter --instability-ratio of MIAmS_tag has been changed from 0.5 to 0.4.

  • The default value for the parameter --min-support-reads of MIAmS_learn has been changed from 400 to 300.

  • The parameter --annotations of MIAmS_learn has changed his input format. New format example below:

    sample	B25	B26	N21
    splA	MSI	MSI	Undetermined
    splB	MSS	MSS	MSI
    

v1.0.0 [2019-02-24]

First version usable in production.