diff --git a/src/02-common-principles.md b/src/02-common-principles.md index d1ab7b4a04..aa11acecb4 100644 --- a/src/02-common-principles.md +++ b/src/02-common-principles.md @@ -33,12 +33,19 @@ misunderstanding we clarify them here. a brain scanning instrument was acquiring data according to particular scanning sequence/protocol. -1. **Data type** - a functional group of different types of data. In BIDS we - define eight data types: `func` (task based and resting state functional MRI), - `dwi` (diffusion weighted imaging), `fmap` (field inhomogeneity mapping data - such as field maps), `anat` (structural imaging such as T1, T2, etc.), `meg` - (magnetoencephalography), `eeg` (electroencephalography), `ieeg` (intracranial - electroencephalography), `beh` (behavioral). +1. **Data type** - a functional group of different types of data. + BIDS defines eight data types: + `func` (task based and resting state functional MRI), + `dwi` (diffusion weighted imaging), + `fmap` (field inhomogeneity mapping data such as field maps), + `anat` (structural imaging such as T1, T2, etc.), + `meg` (magnetoencephalography), + `eeg` (electroencephalography), + `ieeg` (intracranial electroencephalography), + `beh` (behavioral). + Data files are contained in a directory named for the data type. + In raw datasets, the data type directory is nested inside subject and + (optionally) session directories. 1. **Task** - a set of structured activities performed by the participant. Tasks are usually accompanied by stimuli and responses, and can greatly vary @@ -57,6 +64,16 @@ misunderstanding we clarify them here. due to different subject response or randomized nature of the stimuli). Run is a synonym of a data acquisition. +1. **Modality** - the category of brain data recorded by a file. + For MRI data, different pulse sequences are considered distinct modalities, + such as `T1w`, `bold` or `dwi`. + For passive recording techniques, such as EEG, MEG or iEEG, + the technique is sufficiently uniform to define the modalities `eeg`, + `meg` and `ieeg`. + When applicable, the modality is indicated in the **suffix**. + The modality may overlap with, but should not be confused with + the **data type**. + 1. **``** - a nonnegative integer, possibly prefixed with arbitrary number of 0s for consistent indentation, e.g., it is `01` in `run-01` following `run-` specification.