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Load FASTA Data Along with Metadata and Validate #56

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GoogleCodeExporter opened this issue Apr 24, 2015 · 0 comments
Open

Load FASTA Data Along with Metadata and Validate #56

GoogleCodeExporter opened this issue Apr 24, 2015 · 0 comments

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@GoogleCodeExporter
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If this is a sequenceProject="true" add this to config.xml metadata, then
add an extra box asking user if they want to load a FASTA file and validate.

On the server side, we want to check that the names in the FASTA file match the 
names in the metadata file, catching two possible error types:

1. metadata file contains Identifiers NOT in the FASTA file.. throw warning
2. FASTA file contains identifiers NOT in the metadata file ... throw warning.

The attached Perl script from Cynthia does this feature now, which users have 
to run manually.  We basically
want this functionality bundled in the current application environment.


Original issue reported on code.google.com by [email protected] on 15 Jul 2014 at 3:11

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