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Work done to support the human mitochondrial codon table in main, but missing from latest release 0.5.8.post1 #67
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0.5.8.post1
0.5.8.post1
I think this makes sense: We merged the MR that adds mitochondrial support in ab6a9e4 which was in Jan 2024, but the 0.5.8 release was in July 2023. Solution should be to create a new release. I'll see if I can do that. |
I tried to create a new release, but it failed with the following. Looks like we need to update our release CI.
|
discussion for how to fix CI/CD on #68 |
I rolled back the unfinished 0.6.0 release so we can restart it once #68 has been updated. |
bioutils 0.6.0 has been released. I consider this issue resolved. |
Describe the bug
The latest build of bioutils does not include the recent work done to add the Human Mitochondrial translation table.
https://github.com/biocommons/bioutils/blob/main/src/bioutils/sequences.py#L605-L610
To Reproduce
Steps to reproduce the behavior:
translate_cds
method withvertebrate_mitochondrial
translation table option.Expected behavior
Code does not throw exception using latest version, but uses the human mitochondrial translation table to generate the following.
The text was updated successfully, but these errors were encountered: