diff --git a/recipes/r-deconcell/build.sh b/recipes/r-deconcell/build.sh new file mode 100644 index 0000000000000..6d23e7f876394 --- /dev/null +++ b/recipes/r-deconcell/build.sh @@ -0,0 +1,4 @@ +#!/bin/bash + +pushd Decon2/DeconCell +$R CMD INSTALL --build . diff --git a/recipes/r-deconcell/meta.yaml b/recipes/r-deconcell/meta.yaml new file mode 100644 index 0000000000000..211669e1ffeda --- /dev/null +++ b/recipes/r-deconcell/meta.yaml @@ -0,0 +1,53 @@ +{% set name = "r-deconcell" %} +{% set version = "0.1.0" %} +{% set vcommit = "335bf320df9c7dd15f636cff2c089d89ba6b786e" %} + +package: + name: {{ name|lower }} + version: {{ version }} + +source: + url: https://github.com/molgenis/systemsgenetics/archive/{{ vcommit }}.tar.gz + sha256: 9dadbe65cdbe72ca6f7bb6869770f40dc4fcea45945fbfb76ace61e41feb5b14 + + +build: + number: 0 + noarch: generic + rpaths: + - lib/R/lib/ + - lib/ + run_exports: + - {{ pin_subpackage('r-deconcell', max_pin="x") }} + +requirements: + host: + - bioconductor-deconrnaseq + - bioconductor-edger + - r-base + - r-data.table + - r-devtools + - r-glmnet + run: + - bioconductor-deconrnaseq + - bioconductor-edger + - r-base + - r-data.table + - r-glmnet + +test: + commands: + - $R -e "library(\"DeconCell\")" + +about: + home: https://github.com/molgenis/systemsgenetics/tree/master/Decon2/DeconCell + license: GPL-3.0-or-later + license_family: GPL3 + summary: DeconCell is an statitsical framework for generating cell proportions predictive models using bulk expresion data. It currently has pre-calculated models + description: | + DeconCell is an statitsical framework for generating cell proportions predictive models using bulk expresion data. It currently has pre-calculated models + dev_url: https://github.com/molgenis/systemsgenetics/tree/master/Decon2/DeconCell + +extra: + recipe-maintainers: + - pettyalex