diff --git a/coverage/class_index.html b/coverage/class_index.html
index f9a89310..8f6e250e 100644
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diff --git a/coverage/coverage.xml b/coverage/coverage.xml
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             <tr class="region">
-                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t53">biobb_dna/curvesplus/canal_unzip.py</a></td>
-                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t53"><data value='init__'>CanalUnzip.__init__</data></a></td>
+                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t54">biobb_dna/curvesplus/canal_unzip.py</a></td>
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             <tr class="region">
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-                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t83"><data value='launch'>CanalUnzip.launch</data></a></td>
+                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t84">biobb_dna/curvesplus/canal_unzip.py</a></td>
+                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t84"><data value='launch'>CanalUnzip.launch</data></a></td>
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             </tr>
             <tr class="region">
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+                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t183">biobb_dna/curvesplus/canal_unzip.py</a></td>
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+                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t199">biobb_dna/curvesplus/canal_unzip.py</a></td>
+                <td class="name left"><a href="z_74fa14c6d0e940a4_canal_unzip_py.html#t199"><data value='main'>main</data></a></td>
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             <tr class="region">
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+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t58">biobb_dna/dna/dna_timeseries_unzip.py</a></td>
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                 <td>11</td>
                 <td>0</td>
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             </tr>
             <tr class="region">
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-                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t89"><data value='launch'>DnaTimeseriesUnzip.launch</data></a></td>
+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t90">biobb_dna/dna/dna_timeseries_unzip.py</a></td>
+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t90"><data value='launch'>DnaTimeseriesUnzip.launch</data></a></td>
                 <td>45</td>
                 <td>15</td>
                 <td>0</td>
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             </tr>
             <tr class="region">
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-                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t186"><data value='dna_timeseries_unzip'>dna_timeseries_unzip</data></a></td>
+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t187">biobb_dna/dna/dna_timeseries_unzip.py</a></td>
+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t187"><data value='dna_timeseries_unzip'>dna_timeseries_unzip</data></a></td>
                 <td>1</td>
                 <td>0</td>
                 <td>0</td>
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             <tr class="region">
-                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t204">biobb_dna/dna/dna_timeseries_unzip.py</a></td>
-                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t204"><data value='main'>main</data></a></td>
+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t205">biobb_dna/dna/dna_timeseries_unzip.py</a></td>
+                <td class="name left"><a href="z_3afbcd666ed82c91_dna_timeseries_unzip_py.html#t205"><data value='main'>main</data></a></td>
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                 <td>11</td>
                 <td>0</td>
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index da28172d..7b70262c 100644
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 </header>
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index 389cc170..ffc098c9 100644
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index 39dfac50..5edda524 100644
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@@ -98,221 +98,222 @@ <h2>
     <p class="pln"><span class="n"><a id="t16" href="#t16">16</a></span><span class="t">    <span class="str">"""</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t17" href="#t17">17</a></span><span class="t"><span class="str">    | biobb_dna DnaTimeseriesUnzip</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t18" href="#t18">18</a></span><span class="t"><span class="str">    | Tool for extracting dna_timeseries output files.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t19" href="#t19">19</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t20" href="#t20">20</a></span><span class="t"><span class="str">    Args:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t21" href="#t21">21</a></span><span class="t"><span class="str">        input_zip_file (str): Zip file with dna_timeseries output files. File type: input. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/data/dna/timeseries_output.zip>`_. Accepted formats: zip (edam:format_3987).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t22" href="#t22">22</a></span><span class="t"><span class="str">        output_path_csv (str): dna_timeseries output csv file contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/dna/dna_timeseries_unzip.csv>`_. Accepted formats: csv (edam:format_3752).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t23" href="#t23">23</a></span><span class="t"><span class="str">        output_path_jpg (str): dna_timeseries output jpg file contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/dna/dna_timeseries_unzip.jpg>`_. Accepted formats: jpg (edam:format_3579).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t24" href="#t24">24</a></span><span class="t"><span class="str">        output_list_path (str) (Optional): Text file with a list of all dna_timeseries output files contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/dna/dna_timeseries_unzip.txt>`_. Accepted formats: txt (edam:format_2330).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t25" href="#t25">25</a></span><span class="t"><span class="str">        properties (dic):</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t26" href="#t26">26</a></span><span class="t"><span class="str">            * **type** (*str*) - (None) Type of analysis, series or histogram. Values: series, hist.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t27" href="#t27">27</a></span><span class="t"><span class="str">            * **parameter** (*str*) - (None) Type of parameter. Values: majd, majw, mind, minw, inclin, tip, xdisp, ydisp, shear, stretch, stagger, buckle, propel, opening, rise, roll, twist, shift, slide, tilt, alphaC, alphaW, betaC, betaW, gammaC, gammaW, deltaC, deltaW, epsilC, epsilW, zetaC, zetaW, chiC, chiW, phaseC, phaseW.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t28" href="#t28">28</a></span><span class="t"><span class="str">            * **sequence** (*str*) - (None) Nucleic acid sequence used for generating dna_timeseries output file.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t29" href="#t29">29</a></span><span class="t"><span class="str">            * **index** (*int*) - (0) Base pair index in the parameter 'sequence', starting from 0.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t30" href="#t30">30</a></span><span class="t"><span class="str">            * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t31" href="#t31">31</a></span><span class="t"><span class="str">            * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t32" href="#t32">32</a></span><span class="t"><span class="str">            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t33" href="#t33">33</a></span><span class="t"><span class="str">    Examples:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t34" href="#t34">34</a></span><span class="t"><span class="str">        This is a use example of how to use the building block from Python::</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t35" href="#t35">35</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t36" href="#t36">36</a></span><span class="t"><span class="str">            from biobb_dna.dna.dna_timeseries_unzip import dna_timeseries_unzip</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t37" href="#t37">37</a></span><span class="t"><span class="str">            prop = {</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t38" href="#t38">38</a></span><span class="t"><span class="str">                'type': 'hist',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t39" href="#t39">39</a></span><span class="t"><span class="str">                'parameter': 'shift',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t40" href="#t40">40</a></span><span class="t"><span class="str">                'sequence': 'CGCGAATTCGCG',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t41" href="#t41">41</a></span><span class="t"><span class="str">                'index': 5</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t42" href="#t42">42</a></span><span class="t"><span class="str">            }</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t43" href="#t43">43</a></span><span class="t"><span class="str">            dna_timeseries_unzip(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t44" href="#t44">44</a></span><span class="t"><span class="str">                input_zip_file='/path/to/dna_timeseries/output.zip',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t45" href="#t45">45</a></span><span class="t"><span class="str">                output_path='/path/to/output.csv',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t46" href="#t46">46</a></span><span class="t"><span class="str">                output_list_path='/path/to/output.txt'</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t47" href="#t47">47</a></span><span class="t"><span class="str">                properties=prop)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t48" href="#t48">48</a></span><span class="t"><span class="str">    Info:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t49" href="#t49">49</a></span><span class="t"><span class="str">        * wrapped_software:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t50" href="#t50">50</a></span><span class="t"><span class="str">            * name: In house</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t51" href="#t51">51</a></span><span class="t"><span class="str">            * license: Apache-2.0</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t52" href="#t52">52</a></span><span class="t"><span class="str">        * ontology:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t53" href="#t53">53</a></span><span class="t"><span class="str">            * name: EDAM</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t54" href="#t54">54</a></span><span class="t"><span class="str">            * schema: http://edamontology.org/EDAM.owl</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t55" href="#t55">55</a></span><span class="t"><span class="str">    """</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t56" href="#t56">56</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t57" href="#t57">57</a></span><span class="t">    <span class="key">def</span> <span class="nam">__init__</span><span class="op">(</span><span class="nam">self</span><span class="op">,</span> <span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t58" href="#t58">58</a></span><span class="t">                 <span class="nam">output_path_csv</span><span class="op">,</span> <span class="nam">output_path_jpg</span><span class="op">,</span> <span class="nam">output_list_path</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="nam">properties</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t59" href="#t59">59</a></span><span class="t">        <span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span> <span class="key">or</span> <span class="op">{</span><span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t60" href="#t60">60</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t61" href="#t61">61</a></span><span class="t">        <span class="com"># Call parent class constructor</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t62" href="#t62">62</a></span><span class="t">        <span class="nam">super</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">__init__</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t63" href="#t63">63</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">locals_var_dict</span> <span class="op">=</span> <span class="nam">locals</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">copy</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t64" href="#t64">64</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t65" href="#t65">65</a></span><span class="t">        <span class="com"># Input/Output files</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t66" href="#t66">66</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">io_dict</span> <span class="op">=</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t67" href="#t67">67</a></span><span class="t">            <span class="str">'in'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t68" href="#t68">68</a></span><span class="t">                <span class="str">'input_zip_file'</span><span class="op">:</span> <span class="nam">input_zip_file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t69" href="#t69">69</a></span><span class="t">            <span class="op">}</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t70" href="#t70">70</a></span><span class="t">            <span class="str">'out'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t71" href="#t71">71</a></span><span class="t">                <span class="str">'output_path_csv'</span><span class="op">:</span> <span class="nam">output_path_csv</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t72" href="#t72">72</a></span><span class="t">                <span class="str">'output_path_jpg'</span><span class="op">:</span> <span class="nam">output_path_jpg</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t73" href="#t73">73</a></span><span class="t">                <span class="str">'output_list_path'</span><span class="op">:</span> <span class="nam">output_list_path</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t74" href="#t74">74</a></span><span class="t">            <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t75" href="#t75">75</a></span><span class="t">        <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t76" href="#t76">76</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t77" href="#t77">77</a></span><span class="t">        <span class="com"># Properties specific for BB</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t78" href="#t78">78</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'type'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t79" href="#t79">79</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">parameter</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'parameter'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t80" href="#t80">80</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'sequence'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t81" href="#t81">81</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'index'</span><span class="op">,</span> <span class="num">0</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t82" href="#t82">82</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t83" href="#t83">83</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t84" href="#t84">84</a></span><span class="t">        <span class="com"># Check the properties</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t85" href="#t85">85</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_properties</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t86" href="#t86">86</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t87" href="#t87">87</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t88" href="#t88">88</a></span><span class="t">    <span class="op">@</span><span class="nam">launchlogger</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t89" href="#t89">89</a></span><span class="t">    <span class="key">def</span> <span class="nam">launch</span><span class="op">(</span><span class="nam">self</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t90" href="#t90">90</a></span><span class="t">        <span class="str">"""Execute the :class:`DnaTimeseriesUnzip &lt;biobb_dna.dna.dna_timeseries_unzip.DnaTimeseriesUnzip>` object."""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t91" href="#t91">91</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t92" href="#t92">92</a></span><span class="t">        <span class="com"># Setup Biobb</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t93" href="#t93">93</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">check_restart</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t94" href="#t94">94</a></span><span class="t">            <span class="key">return</span> <span class="num">0</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t95" href="#t95">95</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">stage_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t96" href="#t96">96</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t97" href="#t97">97</a></span><span class="t">        <span class="com"># Check that both properties are set</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t98" href="#t98">98</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">is</span> <span class="key">None</span> <span class="key">or</span> <span class="nam">self</span><span class="op">.</span><span class="nam">parameter</span> <span class="key">is</span> <span class="key">None</span> <span class="key">or</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t99" href="#t99">99</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Properties 'type', 'parameter' and 'sequence' are mandatory to run DnaTimeseriesUnzip. Please set them."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t100" href="#t100">100</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t101" href="#t101">101</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t102" href="#t102">102</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t103" href="#t103">103</a></span><span class="t">        <span class="com"># Check that the type is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t104" href="#t104">104</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">not</span> <span class="key">in</span> <span class="op">[</span><span class="str">"series"</span><span class="op">,</span> <span class="str">"hist"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t105" href="#t105">105</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Type {self.type} not valid. Valid types are: series, hist."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t106" href="#t106">106</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t107" href="#t107">107</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t108" href="#t108">108</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t109" href="#t109">109</a></span><span class="t">        <span class="com"># Check that the parameter is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t110" href="#t110">110</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">parameter</span> <span class="key">not</span> <span class="key">in</span> <span class="op">[</span><span class="str">"majd"</span><span class="op">,</span> <span class="str">"majw"</span><span class="op">,</span> <span class="str">"mind"</span><span class="op">,</span> <span class="str">"minw"</span><span class="op">,</span> <span class="str">"inclin"</span><span class="op">,</span> <span class="str">"tip"</span><span class="op">,</span> <span class="str">"xdisp"</span><span class="op">,</span> <span class="str">"ydisp"</span><span class="op">,</span> <span class="str">"shear"</span><span class="op">,</span> <span class="str">"stretch"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t111" href="#t111">111</a></span><span class="t">                                  <span class="str">"stagger"</span><span class="op">,</span> <span class="str">"buckle"</span><span class="op">,</span> <span class="str">"propel"</span><span class="op">,</span> <span class="str">"opening"</span><span class="op">,</span> <span class="str">"rise"</span><span class="op">,</span> <span class="str">"roll"</span><span class="op">,</span> <span class="str">"twist"</span><span class="op">,</span> <span class="str">"shift"</span><span class="op">,</span> <span class="str">"slide"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t112" href="#t112">112</a></span><span class="t">                                  <span class="str">"tilt"</span><span class="op">,</span> <span class="str">"alphaC"</span><span class="op">,</span> <span class="str">"alphaW"</span><span class="op">,</span> <span class="str">"betaC"</span><span class="op">,</span> <span class="str">"betaW"</span><span class="op">,</span> <span class="str">"gammaC"</span><span class="op">,</span> <span class="str">"gammaW"</span><span class="op">,</span> <span class="str">"deltaC"</span><span class="op">,</span> <span class="str">"deltaW"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t113" href="#t113">113</a></span><span class="t">                                  <span class="str">"epsilC"</span><span class="op">,</span> <span class="str">"epsilW"</span><span class="op">,</span> <span class="str">"zetaC"</span><span class="op">,</span> <span class="str">"zetaW"</span><span class="op">,</span> <span class="str">"chiC"</span><span class="op">,</span> <span class="str">"chiW"</span><span class="op">,</span> <span class="str">"phaseC"</span><span class="op">,</span> <span class="str">"phaseW"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t114" href="#t114">114</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Parameter {self.parameter} not valid. Valid parameters are: majd, majw, mind, minw, inclin, tip, xdisp, ydisp, shear, stretch, stagger, buckle, propel, opening, rise, roll, twist, shift, slide, tilt, alphaC, alphaW, betaC, betaW, gammaC, gammaW, deltaC, deltaW, epsilC, epsilW, zetaC, zetaW, chiC, chiW, phaseC, phaseW."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t115" href="#t115">115</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t116" href="#t116">116</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t117" href="#t117">117</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t118" href="#t118">118</a></span><span class="t">        <span class="com"># Check that the sequence is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t119" href="#t119">119</a></span><span class="t">        <span class="nam">pattern</span> <span class="op">=</span> <span class="str">r'^[ACGT]+$'</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t120" href="#t120">120</a></span><span class="t">        <span class="key">if</span> <span class="key">not</span> <span class="nam">re</span><span class="op">.</span><span class="nam">match</span><span class="op">(</span><span class="nam">pattern</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t121" href="#t121">121</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Sequence {self.sequence} not valid. Only 'A', 'C', 'G' or 'T' bases allowed."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t122" href="#t122">122</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t123" href="#t123">123</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t124" href="#t124">124</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t125" href="#t125">125</a></span><span class="t">        <span class="com"># Check that the index is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t126" href="#t126">126</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">&lt;</span> <span class="num">0</span> <span class="key">or</span> <span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">>=</span> <span class="nam">len</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">)</span> <span class="op">-</span> <span class="num">1</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t127" href="#t127">127</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Index {self.index} not valid. It should be between 0 and {len(self.sequence) - 2}."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t128" href="#t128">128</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t129" href="#t129">129</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t130" href="#t130">130</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t131" href="#t131">131</a></span><span class="t">        <span class="com"># Get index sequence base and next base</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t132" href="#t132">132</a></span><span class="t">        <span class="nam">bp</span> <span class="op">=</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">[</span><span class="nam">self</span><span class="op">.</span><span class="nam">index</span><span class="op">]</span> <span class="op">+</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">[</span><span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">+</span> <span class="num">1</span><span class="op">]</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t133" href="#t133">133</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t134" href="#t134">134</a></span><span class="t">        <span class="com"># Get the filename</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t135" href="#t135">135</a></span><span class="t">        <span class="nam">filename</span> <span class="op">=</span> <span class="str">f"{self.type}_{self.parameter}_{self.index + 1}_{bp}"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t136" href="#t136">136</a></span><span class="t">        <span class="nam">csv_file</span> <span class="op">=</span> <span class="str">f"{filename}.csv"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t137" href="#t137">137</a></span><span class="t">        <span class="nam">jpg_file</span> <span class="op">=</span> <span class="str">f"{filename}.jpg"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t138" href="#t138">138</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t139" href="#t139">139</a></span><span class="t">        <span class="com"># Unzip the file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t140" href="#t140">140</a></span><span class="t">        <span class="key">with</span> <span class="nam">zipfile</span><span class="op">.</span><span class="nam">ZipFile</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"in"</span><span class="op">]</span><span class="op">[</span><span class="str">"input_zip_file"</span><span class="op">]</span><span class="op">,</span> <span class="str">'r'</span><span class="op">)</span> <span class="key">as</span> <span class="nam">zip_ref</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t141" href="#t141">141</a></span><span class="t">            <span class="com"># Check if the csv file exists in the zip file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t142" href="#t142">142</a></span><span class="t">            <span class="key">if</span> <span class="nam">csv_file</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t143" href="#t143">143</a></span><span class="t">                <span class="com"># Extract the file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t144" href="#t144">144</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f'{csv_file} exists, copying into {self.stage_io_dict["out"]["output_path_csv"]}.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t145" href="#t145">145</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t146" href="#t146">146</a></span><span class="t">                <span class="key">with</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">open</span><span class="op">(</span><span class="nam">csv_file</span><span class="op">)</span> <span class="key">as</span> <span class="nam">source</span><span class="op">,</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_path_csv"</span><span class="op">]</span><span class="op">,</span> <span class="str">"wb"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">target</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t147" href="#t147">147</a></span><span class="t">                    <span class="nam">shutil</span><span class="op">.</span><span class="nam">copyfileobj</span><span class="op">(</span><span class="nam">source</span><span class="op">,</span> <span class="nam">target</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t148" href="#t148">148</a></span><span class="t">            <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t149" href="#t149">149</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"File {csv_file} not found in the zip file."</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t150" href="#t150">150</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t151" href="#t151">151</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t152" href="#t152">152</a></span><span class="t">            <span class="com"># Check if the jpg file exists in the zip file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t153" href="#t153">153</a></span><span class="t">            <span class="key">if</span> <span class="nam">jpg_file</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t154" href="#t154">154</a></span><span class="t">                <span class="com"># Extract the file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t155" href="#t155">155</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f'{jpg_file} exists, copying into {self.stage_io_dict["out"]["output_path_jpg"]}.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t156" href="#t156">156</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t157" href="#t157">157</a></span><span class="t">                <span class="key">with</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">open</span><span class="op">(</span><span class="nam">jpg_file</span><span class="op">)</span> <span class="key">as</span> <span class="nam">source</span><span class="op">,</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_path_jpg"</span><span class="op">]</span><span class="op">,</span> <span class="str">"wb"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">target</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t158" href="#t158">158</a></span><span class="t">                    <span class="nam">shutil</span><span class="op">.</span><span class="nam">copyfileobj</span><span class="op">(</span><span class="nam">source</span><span class="op">,</span> <span class="nam">target</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t159" href="#t159">159</a></span><span class="t">            <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t160" href="#t160">160</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"File {jpg_file} not found in the zip file."</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t161" href="#t161">161</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t162" href="#t162">162</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t163" href="#t163">163</a></span><span class="t">            <span class="com"># Write the list of files</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t164" href="#t164">164</a></span><span class="t">            <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t165" href="#t165">165</a></span><span class="t">                <span class="key">with</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">,</span> <span class="str">"w"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">f</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t166" href="#t166">166</a></span><span class="t">                    <span class="key">for</span> <span class="nam">name</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t167" href="#t167">167</a></span><span class="t">                        <span class="nam">f</span><span class="op">.</span><span class="nam">write</span><span class="op">(</span><span class="str">f"{name}\n"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t168" href="#t168">168</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t169" href="#t169">169</a></span><span class="t">        <span class="com"># Run Biobb block</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t170" href="#t170">170</a></span><span class="t">        <span class="com"># self.run_biobb()</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t171" href="#t171">171</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t172" href="#t172">172</a></span><span class="t">        <span class="com"># Copy files to host</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t173" href="#t173">173</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">copy_to_host</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t174" href="#t174">174</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t175" href="#t175">175</a></span><span class="t">        <span class="com"># Remove temporary file(s)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t176" href="#t176">176</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">tmp_files</span><span class="op">.</span><span class="nam">extend</span><span class="op">(</span><span class="op">[</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t177" href="#t177">177</a></span><span class="t">            <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">"unique_dir"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t178" href="#t178">178</a></span><span class="t">        <span class="op">]</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t179" href="#t179">179</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">remove_tmp_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t180" href="#t180">180</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t181" href="#t181">181</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="nam">output_files_created</span><span class="op">=</span><span class="key">True</span><span class="op">,</span> <span class="nam">raise_exception</span><span class="op">=</span><span class="key">False</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t182" href="#t182">182</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t183" href="#t183">183</a></span><span class="t">        <span class="key">return</span> <span class="nam">self</span><span class="op">.</span><span class="nam">return_code</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t184" href="#t184">184</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t19" href="#t19">19</a></span><span class="t"><span class="str">    | Unzips a zip file containing dna_timeseries output files and extracts the csv and jpg files.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t20" href="#t20">20</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t21" href="#t21">21</a></span><span class="t"><span class="str">    Args:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t22" href="#t22">22</a></span><span class="t"><span class="str">        input_zip_file (str): Zip file with dna_timeseries output files. File type: input. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/data/dna/timeseries_output.zip>`_. Accepted formats: zip (edam:format_3987).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t23" href="#t23">23</a></span><span class="t"><span class="str">        output_path_csv (str): dna_timeseries output csv file contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/dna/dna_timeseries_unzip.csv>`_. Accepted formats: csv (edam:format_3752).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t24" href="#t24">24</a></span><span class="t"><span class="str">        output_path_jpg (str): dna_timeseries output jpg file contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/dna/dna_timeseries_unzip.jpg>`_. Accepted formats: jpg (edam:format_3579).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t25" href="#t25">25</a></span><span class="t"><span class="str">        output_list_path (str) (Optional): Text file with a list of all dna_timeseries output files contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/dna/dna_timeseries_unzip.txt>`_. Accepted formats: txt (edam:format_2330).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t26" href="#t26">26</a></span><span class="t"><span class="str">        properties (dic):</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t27" href="#t27">27</a></span><span class="t"><span class="str">            * **type** (*str*) - (None) Type of analysis, series or histogram. Values: series, hist.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t28" href="#t28">28</a></span><span class="t"><span class="str">            * **parameter** (*str*) - (None) Type of parameter. Values: majd, majw, mind, minw, inclin, tip, xdisp, ydisp, shear, stretch, stagger, buckle, propel, opening, rise, roll, twist, shift, slide, tilt, alphaC, alphaW, betaC, betaW, gammaC, gammaW, deltaC, deltaW, epsilC, epsilW, zetaC, zetaW, chiC, chiW, phaseC, phaseW.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t29" href="#t29">29</a></span><span class="t"><span class="str">            * **sequence** (*str*) - (None) Nucleic acid sequence used for generating dna_timeseries output file.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t30" href="#t30">30</a></span><span class="t"><span class="str">            * **index** (*int*) - (0) Base pair index in the parameter 'sequence', starting from 0.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t31" href="#t31">31</a></span><span class="t"><span class="str">            * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t32" href="#t32">32</a></span><span class="t"><span class="str">            * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t33" href="#t33">33</a></span><span class="t"><span class="str">            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t34" href="#t34">34</a></span><span class="t"><span class="str">    Examples:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t35" href="#t35">35</a></span><span class="t"><span class="str">        This is a use example of how to use the building block from Python::</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t36" href="#t36">36</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t37" href="#t37">37</a></span><span class="t"><span class="str">            from biobb_dna.dna.dna_timeseries_unzip import dna_timeseries_unzip</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t38" href="#t38">38</a></span><span class="t"><span class="str">            prop = {</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t39" href="#t39">39</a></span><span class="t"><span class="str">                'type': 'hist',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t40" href="#t40">40</a></span><span class="t"><span class="str">                'parameter': 'shift',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t41" href="#t41">41</a></span><span class="t"><span class="str">                'sequence': 'CGCGAATTCGCG',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t42" href="#t42">42</a></span><span class="t"><span class="str">                'index': 5</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t43" href="#t43">43</a></span><span class="t"><span class="str">            }</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t44" href="#t44">44</a></span><span class="t"><span class="str">            dna_timeseries_unzip(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t45" href="#t45">45</a></span><span class="t"><span class="str">                input_zip_file='/path/to/dna_timeseries/output.zip',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t46" href="#t46">46</a></span><span class="t"><span class="str">                output_path='/path/to/output.csv',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t47" href="#t47">47</a></span><span class="t"><span class="str">                output_list_path='/path/to/output.txt'</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t48" href="#t48">48</a></span><span class="t"><span class="str">                properties=prop)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t49" href="#t49">49</a></span><span class="t"><span class="str">    Info:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t50" href="#t50">50</a></span><span class="t"><span class="str">        * wrapped_software:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t51" href="#t51">51</a></span><span class="t"><span class="str">            * name: In house</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t52" href="#t52">52</a></span><span class="t"><span class="str">            * license: Apache-2.0</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t53" href="#t53">53</a></span><span class="t"><span class="str">        * ontology:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t54" href="#t54">54</a></span><span class="t"><span class="str">            * name: EDAM</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t55" href="#t55">55</a></span><span class="t"><span class="str">            * schema: http://edamontology.org/EDAM.owl</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t56" href="#t56">56</a></span><span class="t"><span class="str">    """</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t57" href="#t57">57</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t58" href="#t58">58</a></span><span class="t">    <span class="key">def</span> <span class="nam">__init__</span><span class="op">(</span><span class="nam">self</span><span class="op">,</span> <span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t59" href="#t59">59</a></span><span class="t">                 <span class="nam">output_path_csv</span><span class="op">,</span> <span class="nam">output_path_jpg</span><span class="op">,</span> <span class="nam">output_list_path</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="nam">properties</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t60" href="#t60">60</a></span><span class="t">        <span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span> <span class="key">or</span> <span class="op">{</span><span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t61" href="#t61">61</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t62" href="#t62">62</a></span><span class="t">        <span class="com"># Call parent class constructor</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t63" href="#t63">63</a></span><span class="t">        <span class="nam">super</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">__init__</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t64" href="#t64">64</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">locals_var_dict</span> <span class="op">=</span> <span class="nam">locals</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">copy</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t65" href="#t65">65</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t66" href="#t66">66</a></span><span class="t">        <span class="com"># Input/Output files</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t67" href="#t67">67</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">io_dict</span> <span class="op">=</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t68" href="#t68">68</a></span><span class="t">            <span class="str">'in'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t69" href="#t69">69</a></span><span class="t">                <span class="str">'input_zip_file'</span><span class="op">:</span> <span class="nam">input_zip_file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t70" href="#t70">70</a></span><span class="t">            <span class="op">}</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t71" href="#t71">71</a></span><span class="t">            <span class="str">'out'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t72" href="#t72">72</a></span><span class="t">                <span class="str">'output_path_csv'</span><span class="op">:</span> <span class="nam">output_path_csv</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t73" href="#t73">73</a></span><span class="t">                <span class="str">'output_path_jpg'</span><span class="op">:</span> <span class="nam">output_path_jpg</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t74" href="#t74">74</a></span><span class="t">                <span class="str">'output_list_path'</span><span class="op">:</span> <span class="nam">output_list_path</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t75" href="#t75">75</a></span><span class="t">            <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t76" href="#t76">76</a></span><span class="t">        <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t77" href="#t77">77</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t78" href="#t78">78</a></span><span class="t">        <span class="com"># Properties specific for BB</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t79" href="#t79">79</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'type'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t80" href="#t80">80</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">parameter</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'parameter'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t81" href="#t81">81</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'sequence'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t82" href="#t82">82</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'index'</span><span class="op">,</span> <span class="num">0</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t83" href="#t83">83</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t84" href="#t84">84</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t85" href="#t85">85</a></span><span class="t">        <span class="com"># Check the properties</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t86" href="#t86">86</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_properties</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t87" href="#t87">87</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t88" href="#t88">88</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t89" href="#t89">89</a></span><span class="t">    <span class="op">@</span><span class="nam">launchlogger</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t90" href="#t90">90</a></span><span class="t">    <span class="key">def</span> <span class="nam">launch</span><span class="op">(</span><span class="nam">self</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t91" href="#t91">91</a></span><span class="t">        <span class="str">"""Execute the :class:`DnaTimeseriesUnzip &lt;biobb_dna.dna.dna_timeseries_unzip.DnaTimeseriesUnzip>` object."""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t92" href="#t92">92</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t93" href="#t93">93</a></span><span class="t">        <span class="com"># Setup Biobb</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t94" href="#t94">94</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">check_restart</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t95" href="#t95">95</a></span><span class="t">            <span class="key">return</span> <span class="num">0</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t96" href="#t96">96</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">stage_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t97" href="#t97">97</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t98" href="#t98">98</a></span><span class="t">        <span class="com"># Check that both properties are set</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t99" href="#t99">99</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">is</span> <span class="key">None</span> <span class="key">or</span> <span class="nam">self</span><span class="op">.</span><span class="nam">parameter</span> <span class="key">is</span> <span class="key">None</span> <span class="key">or</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t100" href="#t100">100</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Properties 'type', 'parameter' and 'sequence' are mandatory to run DnaTimeseriesUnzip. Please set them."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t101" href="#t101">101</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t102" href="#t102">102</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t103" href="#t103">103</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t104" href="#t104">104</a></span><span class="t">        <span class="com"># Check that the type is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t105" href="#t105">105</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">not</span> <span class="key">in</span> <span class="op">[</span><span class="str">"series"</span><span class="op">,</span> <span class="str">"hist"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t106" href="#t106">106</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Type {self.type} not valid. Valid types are: series, hist."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t107" href="#t107">107</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t108" href="#t108">108</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t109" href="#t109">109</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t110" href="#t110">110</a></span><span class="t">        <span class="com"># Check that the parameter is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t111" href="#t111">111</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">parameter</span> <span class="key">not</span> <span class="key">in</span> <span class="op">[</span><span class="str">"majd"</span><span class="op">,</span> <span class="str">"majw"</span><span class="op">,</span> <span class="str">"mind"</span><span class="op">,</span> <span class="str">"minw"</span><span class="op">,</span> <span class="str">"inclin"</span><span class="op">,</span> <span class="str">"tip"</span><span class="op">,</span> <span class="str">"xdisp"</span><span class="op">,</span> <span class="str">"ydisp"</span><span class="op">,</span> <span class="str">"shear"</span><span class="op">,</span> <span class="str">"stretch"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t112" href="#t112">112</a></span><span class="t">                                  <span class="str">"stagger"</span><span class="op">,</span> <span class="str">"buckle"</span><span class="op">,</span> <span class="str">"propel"</span><span class="op">,</span> <span class="str">"opening"</span><span class="op">,</span> <span class="str">"rise"</span><span class="op">,</span> <span class="str">"roll"</span><span class="op">,</span> <span class="str">"twist"</span><span class="op">,</span> <span class="str">"shift"</span><span class="op">,</span> <span class="str">"slide"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t113" href="#t113">113</a></span><span class="t">                                  <span class="str">"tilt"</span><span class="op">,</span> <span class="str">"alphaC"</span><span class="op">,</span> <span class="str">"alphaW"</span><span class="op">,</span> <span class="str">"betaC"</span><span class="op">,</span> <span class="str">"betaW"</span><span class="op">,</span> <span class="str">"gammaC"</span><span class="op">,</span> <span class="str">"gammaW"</span><span class="op">,</span> <span class="str">"deltaC"</span><span class="op">,</span> <span class="str">"deltaW"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t114" href="#t114">114</a></span><span class="t">                                  <span class="str">"epsilC"</span><span class="op">,</span> <span class="str">"epsilW"</span><span class="op">,</span> <span class="str">"zetaC"</span><span class="op">,</span> <span class="str">"zetaW"</span><span class="op">,</span> <span class="str">"chiC"</span><span class="op">,</span> <span class="str">"chiW"</span><span class="op">,</span> <span class="str">"phaseC"</span><span class="op">,</span> <span class="str">"phaseW"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t115" href="#t115">115</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Parameter {self.parameter} not valid. Valid parameters are: majd, majw, mind, minw, inclin, tip, xdisp, ydisp, shear, stretch, stagger, buckle, propel, opening, rise, roll, twist, shift, slide, tilt, alphaC, alphaW, betaC, betaW, gammaC, gammaW, deltaC, deltaW, epsilC, epsilW, zetaC, zetaW, chiC, chiW, phaseC, phaseW."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t116" href="#t116">116</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t117" href="#t117">117</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t118" href="#t118">118</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t119" href="#t119">119</a></span><span class="t">        <span class="com"># Check that the sequence is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t120" href="#t120">120</a></span><span class="t">        <span class="nam">pattern</span> <span class="op">=</span> <span class="str">r'^[ACGT]+$'</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t121" href="#t121">121</a></span><span class="t">        <span class="key">if</span> <span class="key">not</span> <span class="nam">re</span><span class="op">.</span><span class="nam">match</span><span class="op">(</span><span class="nam">pattern</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t122" href="#t122">122</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Sequence {self.sequence} not valid. Only 'A', 'C', 'G' or 'T' bases allowed."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t123" href="#t123">123</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t124" href="#t124">124</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t125" href="#t125">125</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t126" href="#t126">126</a></span><span class="t">        <span class="com"># Check that the index is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t127" href="#t127">127</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">&lt;</span> <span class="num">0</span> <span class="key">or</span> <span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">>=</span> <span class="nam">len</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">)</span> <span class="op">-</span> <span class="num">1</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t128" href="#t128">128</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Index {self.index} not valid. It should be between 0 and {len(self.sequence) - 2}."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t129" href="#t129">129</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t130" href="#t130">130</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t131" href="#t131">131</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t132" href="#t132">132</a></span><span class="t">        <span class="com"># Get index sequence base and next base</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t133" href="#t133">133</a></span><span class="t">        <span class="nam">bp</span> <span class="op">=</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">[</span><span class="nam">self</span><span class="op">.</span><span class="nam">index</span><span class="op">]</span> <span class="op">+</span> <span class="nam">self</span><span class="op">.</span><span class="nam">sequence</span><span class="op">[</span><span class="nam">self</span><span class="op">.</span><span class="nam">index</span> <span class="op">+</span> <span class="num">1</span><span class="op">]</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t134" href="#t134">134</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t135" href="#t135">135</a></span><span class="t">        <span class="com"># Get the filename</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t136" href="#t136">136</a></span><span class="t">        <span class="nam">filename</span> <span class="op">=</span> <span class="str">f"{self.type}_{self.parameter}_{self.index + 1}_{bp}"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t137" href="#t137">137</a></span><span class="t">        <span class="nam">csv_file</span> <span class="op">=</span> <span class="str">f"{filename}.csv"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t138" href="#t138">138</a></span><span class="t">        <span class="nam">jpg_file</span> <span class="op">=</span> <span class="str">f"{filename}.jpg"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t139" href="#t139">139</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t140" href="#t140">140</a></span><span class="t">        <span class="com"># Unzip the file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t141" href="#t141">141</a></span><span class="t">        <span class="key">with</span> <span class="nam">zipfile</span><span class="op">.</span><span class="nam">ZipFile</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"in"</span><span class="op">]</span><span class="op">[</span><span class="str">"input_zip_file"</span><span class="op">]</span><span class="op">,</span> <span class="str">'r'</span><span class="op">)</span> <span class="key">as</span> <span class="nam">zip_ref</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t142" href="#t142">142</a></span><span class="t">            <span class="com"># Check if the csv file exists in the zip file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t143" href="#t143">143</a></span><span class="t">            <span class="key">if</span> <span class="nam">csv_file</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t144" href="#t144">144</a></span><span class="t">                <span class="com"># Extract the file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t145" href="#t145">145</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f'{csv_file} exists, copying into {self.stage_io_dict["out"]["output_path_csv"]}.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t146" href="#t146">146</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t147" href="#t147">147</a></span><span class="t">                <span class="key">with</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">open</span><span class="op">(</span><span class="nam">csv_file</span><span class="op">)</span> <span class="key">as</span> <span class="nam">source</span><span class="op">,</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_path_csv"</span><span class="op">]</span><span class="op">,</span> <span class="str">"wb"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">target</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t148" href="#t148">148</a></span><span class="t">                    <span class="nam">shutil</span><span class="op">.</span><span class="nam">copyfileobj</span><span class="op">(</span><span class="nam">source</span><span class="op">,</span> <span class="nam">target</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t149" href="#t149">149</a></span><span class="t">            <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t150" href="#t150">150</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"File {csv_file} not found in the zip file."</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t151" href="#t151">151</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t152" href="#t152">152</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t153" href="#t153">153</a></span><span class="t">            <span class="com"># Check if the jpg file exists in the zip file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t154" href="#t154">154</a></span><span class="t">            <span class="key">if</span> <span class="nam">jpg_file</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t155" href="#t155">155</a></span><span class="t">                <span class="com"># Extract the file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t156" href="#t156">156</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f'{jpg_file} exists, copying into {self.stage_io_dict["out"]["output_path_jpg"]}.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t157" href="#t157">157</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t158" href="#t158">158</a></span><span class="t">                <span class="key">with</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">open</span><span class="op">(</span><span class="nam">jpg_file</span><span class="op">)</span> <span class="key">as</span> <span class="nam">source</span><span class="op">,</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_path_jpg"</span><span class="op">]</span><span class="op">,</span> <span class="str">"wb"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">target</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t159" href="#t159">159</a></span><span class="t">                    <span class="nam">shutil</span><span class="op">.</span><span class="nam">copyfileobj</span><span class="op">(</span><span class="nam">source</span><span class="op">,</span> <span class="nam">target</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t160" href="#t160">160</a></span><span class="t">            <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t161" href="#t161">161</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"File {jpg_file} not found in the zip file."</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t162" href="#t162">162</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t163" href="#t163">163</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t164" href="#t164">164</a></span><span class="t">            <span class="com"># Write the list of files</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t165" href="#t165">165</a></span><span class="t">            <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t166" href="#t166">166</a></span><span class="t">                <span class="key">with</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">,</span> <span class="str">"w"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">f</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t167" href="#t167">167</a></span><span class="t">                    <span class="key">for</span> <span class="nam">name</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t168" href="#t168">168</a></span><span class="t">                        <span class="nam">f</span><span class="op">.</span><span class="nam">write</span><span class="op">(</span><span class="str">f"{name}\n"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t169" href="#t169">169</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t170" href="#t170">170</a></span><span class="t">        <span class="com"># Run Biobb block</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t171" href="#t171">171</a></span><span class="t">        <span class="com"># self.run_biobb()</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t172" href="#t172">172</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t173" href="#t173">173</a></span><span class="t">        <span class="com"># Copy files to host</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t174" href="#t174">174</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">copy_to_host</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t175" href="#t175">175</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t176" href="#t176">176</a></span><span class="t">        <span class="com"># Remove temporary file(s)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t177" href="#t177">177</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">tmp_files</span><span class="op">.</span><span class="nam">extend</span><span class="op">(</span><span class="op">[</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t178" href="#t178">178</a></span><span class="t">            <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">"unique_dir"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t179" href="#t179">179</a></span><span class="t">        <span class="op">]</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t180" href="#t180">180</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">remove_tmp_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t181" href="#t181">181</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t182" href="#t182">182</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="nam">output_files_created</span><span class="op">=</span><span class="key">True</span><span class="op">,</span> <span class="nam">raise_exception</span><span class="op">=</span><span class="key">False</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t183" href="#t183">183</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t184" href="#t184">184</a></span><span class="t">        <span class="key">return</span> <span class="nam">self</span><span class="op">.</span><span class="nam">return_code</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t185" href="#t185">185</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t186" href="#t186">186</a></span><span class="t"><span class="key">def</span> <span class="nam">dna_timeseries_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t187" href="#t187">187</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t188" href="#t188">188</a></span><span class="t">        <span class="nam">output_path_csv</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t189" href="#t189">189</a></span><span class="t">        <span class="nam">output_path_jpg</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t190" href="#t190">190</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">:</span> <span class="nam">str</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t191" href="#t191">191</a></span><span class="t">        <span class="nam">properties</span><span class="op">:</span> <span class="nam">dict</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t192" href="#t192">192</a></span><span class="t">        <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t193" href="#t193">193</a></span><span class="t">    <span class="str">"""Create :class:`DnaTimeseriesUnzip &lt;biobb_dna.dna.dna_timeseries_unzip.DnaTimeseriesUnzip>` class and</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t194" href="#t194">194</a></span><span class="t"><span class="str">    execute the :meth:`launch() &lt;biobb_dna.dna.dna_timeseries_unzip.DnaTimeseriesUnzip.launch>` method."""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t195" href="#t195">195</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t196" href="#t196">196</a></span><span class="t">    <span class="key">return</span> <span class="nam">DnaTimeseriesUnzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t197" href="#t197">197</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t198" href="#t198">198</a></span><span class="t">        <span class="nam">output_path_csv</span><span class="op">=</span><span class="nam">output_path_csv</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t199" href="#t199">199</a></span><span class="t">        <span class="nam">output_path_jpg</span><span class="op">=</span><span class="nam">output_path_jpg</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t200" href="#t200">200</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t201" href="#t201">201</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span><span class="op">.</span><span class="nam">launch</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t202" href="#t202">202</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t186" href="#t186">186</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t187" href="#t187">187</a></span><span class="t"><span class="key">def</span> <span class="nam">dna_timeseries_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t188" href="#t188">188</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t189" href="#t189">189</a></span><span class="t">        <span class="nam">output_path_csv</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t190" href="#t190">190</a></span><span class="t">        <span class="nam">output_path_jpg</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t191" href="#t191">191</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">:</span> <span class="nam">str</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t192" href="#t192">192</a></span><span class="t">        <span class="nam">properties</span><span class="op">:</span> <span class="nam">dict</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t193" href="#t193">193</a></span><span class="t">        <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t194" href="#t194">194</a></span><span class="t">    <span class="str">"""Create :class:`DnaTimeseriesUnzip &lt;biobb_dna.dna.dna_timeseries_unzip.DnaTimeseriesUnzip>` class and</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t195" href="#t195">195</a></span><span class="t"><span class="str">    execute the :meth:`launch() &lt;biobb_dna.dna.dna_timeseries_unzip.DnaTimeseriesUnzip.launch>` method."""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t196" href="#t196">196</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t197" href="#t197">197</a></span><span class="t">    <span class="key">return</span> <span class="nam">DnaTimeseriesUnzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t198" href="#t198">198</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t199" href="#t199">199</a></span><span class="t">        <span class="nam">output_path_csv</span><span class="op">=</span><span class="nam">output_path_csv</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t200" href="#t200">200</a></span><span class="t">        <span class="nam">output_path_jpg</span><span class="op">=</span><span class="nam">output_path_jpg</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t201" href="#t201">201</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t202" href="#t202">202</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span><span class="op">.</span><span class="nam">launch</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t203" href="#t203">203</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t204" href="#t204">204</a></span><span class="t"><span class="key">def</span> <span class="nam">main</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t205" href="#t205">205</a></span><span class="t">    <span class="str">"""Command line execution of this building block. Please check the command line documentation."""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t206" href="#t206">206</a></span><span class="t">    <span class="nam">parser</span> <span class="op">=</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">ArgumentParser</span><span class="op">(</span><span class="nam">description</span><span class="op">=</span><span class="str">'Tool for extracting dna_timeseries output files.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t207" href="#t207">207</a></span><span class="t">                                     <span class="nam">formatter_class</span><span class="op">=</span><span class="key">lambda</span> <span class="nam">prog</span><span class="op">:</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">RawTextHelpFormatter</span><span class="op">(</span><span class="nam">prog</span><span class="op">,</span> <span class="nam">width</span><span class="op">=</span><span class="num">99999</span><span class="op">)</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t208" href="#t208">208</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--config'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span> <span class="nam">help</span><span class="op">=</span><span class="str">'Configuration file'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t209" href="#t209">209</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t210" href="#t210">210</a></span><span class="t">    <span class="nam">required_args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument_group</span><span class="op">(</span><span class="str">'required arguments'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t211" href="#t211">211</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--input_zip_file'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t212" href="#t212">212</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'Zip file with dna_timeseries output files. Accepted formats: zip.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t213" href="#t213">213</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_path_csv'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t214" href="#t214">214</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'dna_timeseries output csv file contained within input_zip_file. Accepted formats: csv.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t215" href="#t215">215</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_path_jpg'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t216" href="#t216">216</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'dna_timeseries output jpg file contained within input_zip_file. Accepted formats: jpg.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t217" href="#t217">217</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_list_path'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t218" href="#t218">218</a></span><span class="t">                        <span class="nam">help</span><span class="op">=</span><span class="str">'Text file with a list of all dna_timeseries output files contained within input_zip_file. Accepted formats: txt.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t219" href="#t219">219</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t220" href="#t220">220</a></span><span class="t">    <span class="nam">args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">parse_args</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t221" href="#t221">221</a></span><span class="t">    <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="op">=</span> <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="key">or</span> <span class="str">"{}"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t222" href="#t222">222</a></span><span class="t">    <span class="nam">properties</span> <span class="op">=</span> <span class="nam">settings</span><span class="op">.</span><span class="nam">ConfReader</span><span class="op">(</span><span class="nam">config</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">config</span><span class="op">)</span><span class="op">.</span><span class="nam">get_prop_dic</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t223" href="#t223">223</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t224" href="#t224">224</a></span><span class="t">    <span class="nam">dna_timeseries_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t225" href="#t225">225</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t226" href="#t226">226</a></span><span class="t">        <span class="nam">output_path_csv</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_path_csv</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t227" href="#t227">227</a></span><span class="t">        <span class="nam">output_path_jpg</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_path_jpg</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t228" href="#t228">228</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t229" href="#t229">229</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t230" href="#t230">230</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t204" href="#t204">204</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t205" href="#t205">205</a></span><span class="t"><span class="key">def</span> <span class="nam">main</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t206" href="#t206">206</a></span><span class="t">    <span class="str">"""Command line execution of this building block. Please check the command line documentation."""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t207" href="#t207">207</a></span><span class="t">    <span class="nam">parser</span> <span class="op">=</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">ArgumentParser</span><span class="op">(</span><span class="nam">description</span><span class="op">=</span><span class="str">'Tool for extracting dna_timeseries output files.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t208" href="#t208">208</a></span><span class="t">                                     <span class="nam">formatter_class</span><span class="op">=</span><span class="key">lambda</span> <span class="nam">prog</span><span class="op">:</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">RawTextHelpFormatter</span><span class="op">(</span><span class="nam">prog</span><span class="op">,</span> <span class="nam">width</span><span class="op">=</span><span class="num">99999</span><span class="op">)</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t209" href="#t209">209</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--config'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span> <span class="nam">help</span><span class="op">=</span><span class="str">'Configuration file'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t210" href="#t210">210</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t211" href="#t211">211</a></span><span class="t">    <span class="nam">required_args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument_group</span><span class="op">(</span><span class="str">'required arguments'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t212" href="#t212">212</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--input_zip_file'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t213" href="#t213">213</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'Zip file with dna_timeseries output files. Accepted formats: zip.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t214" href="#t214">214</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_path_csv'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t215" href="#t215">215</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'dna_timeseries output csv file contained within input_zip_file. Accepted formats: csv.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t216" href="#t216">216</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_path_jpg'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t217" href="#t217">217</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'dna_timeseries output jpg file contained within input_zip_file. Accepted formats: jpg.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t218" href="#t218">218</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_list_path'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t219" href="#t219">219</a></span><span class="t">                        <span class="nam">help</span><span class="op">=</span><span class="str">'Text file with a list of all dna_timeseries output files contained within input_zip_file. Accepted formats: txt.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t220" href="#t220">220</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t221" href="#t221">221</a></span><span class="t">    <span class="nam">args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">parse_args</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t222" href="#t222">222</a></span><span class="t">    <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="op">=</span> <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="key">or</span> <span class="str">"{}"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t223" href="#t223">223</a></span><span class="t">    <span class="nam">properties</span> <span class="op">=</span> <span class="nam">settings</span><span class="op">.</span><span class="nam">ConfReader</span><span class="op">(</span><span class="nam">config</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">config</span><span class="op">)</span><span class="op">.</span><span class="nam">get_prop_dic</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t224" href="#t224">224</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t225" href="#t225">225</a></span><span class="t">    <span class="nam">dna_timeseries_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t226" href="#t226">226</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t227" href="#t227">227</a></span><span class="t">        <span class="nam">output_path_csv</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_path_csv</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t228" href="#t228">228</a></span><span class="t">        <span class="nam">output_path_jpg</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_path_jpg</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t229" href="#t229">229</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t230" href="#t230">230</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t231" href="#t231">231</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t232" href="#t232">232</a></span><span class="t"><span class="key">if</span> <span class="nam">__name__</span> <span class="op">==</span> <span class="str">'__main__'</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t233" href="#t233">233</a></span><span class="t">    <span class="nam">main</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t232" href="#t232">232</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t233" href="#t233">233</a></span><span class="t"><span class="key">if</span> <span class="nam">__name__</span> <span class="op">==</span> <span class="str">'__main__'</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t234" href="#t234">234</a></span><span class="t">    <span class="nam">main</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
 </main>
 <footer>
     <div class="content">
@@ -322,7 +323,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
         </p>
     </div>
 </footer>
diff --git a/coverage/z_64e03be4370b7ecc___init___py.html b/coverage/z_64e03be4370b7ecc___init___py.html
index 6278811a..8511c9c6 100644
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+++ b/coverage/z_64e03be4370b7ecc___init___py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_64e03be4370b7ecc_intrabpcorr_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -94,7 +94,7 @@ <h2>
             <a class="nav" href="z_64e03be4370b7ecc_intrabpcorr_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_64e03be4370b7ecc_intrabpcorr_py.html b/coverage/z_64e03be4370b7ecc_intrabpcorr_py.html
index 30b5b56d..434f1692 100644
--- a/coverage/z_64e03be4370b7ecc_intrabpcorr_py.html
+++ b/coverage/z_64e03be4370b7ecc_intrabpcorr_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_64e03be4370b7ecc_intrahpcorr_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -419,7 +419,7 @@ <h2>
             <a class="nav" href="z_64e03be4370b7ecc_intrahpcorr_py.html">&#xbb; next</a>
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_64e03be4370b7ecc_intrahpcorr_py.html b/coverage/z_64e03be4370b7ecc_intrahpcorr_py.html
index be19bfde..4a662ea6 100644
--- a/coverage/z_64e03be4370b7ecc_intrahpcorr_py.html
+++ b/coverage/z_64e03be4370b7ecc_intrahpcorr_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_64e03be4370b7ecc_intraseqcorr_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -431,7 +431,7 @@ <h2>
             <a class="nav" href="z_64e03be4370b7ecc_intraseqcorr_py.html">&#xbb; next</a>
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_64e03be4370b7ecc_intraseqcorr_py.html b/coverage/z_64e03be4370b7ecc_intraseqcorr_py.html
index 0776a3fb..a30f97e9 100644
--- a/coverage/z_64e03be4370b7ecc_intraseqcorr_py.html
+++ b/coverage/z_64e03be4370b7ecc_intraseqcorr_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_9de9475b0a6fab52___init___py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -324,7 +324,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_74fa14c6d0e940a4___init___py.html b/coverage/z_74fa14c6d0e940a4___init___py.html
index 9bad198b..bcb1c05f 100644
--- a/coverage/z_74fa14c6d0e940a4___init___py.html
+++ b/coverage/z_74fa14c6d0e940a4___init___py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_74fa14c6d0e940a4_biobb_canal_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -91,7 +91,7 @@ <h2>
             <a class="nav" href="z_74fa14c6d0e940a4_biobb_canal_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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 </footer>
diff --git a/coverage/z_74fa14c6d0e940a4_biobb_canal_py.html b/coverage/z_74fa14c6d0e940a4_biobb_canal_py.html
index 8d97c817..e5939f73 100644
--- a/coverage/z_74fa14c6d0e940a4_biobb_canal_py.html
+++ b/coverage/z_74fa14c6d0e940a4_biobb_canal_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_74fa14c6d0e940a4_biobb_canion_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
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@@ -328,7 +328,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_74fa14c6d0e940a4_biobb_canion_py.html b/coverage/z_74fa14c6d0e940a4_biobb_canion_py.html
index c7c92b20..43333a76 100644
--- a/coverage/z_74fa14c6d0e940a4_biobb_canion_py.html
+++ b/coverage/z_74fa14c6d0e940a4_biobb_canion_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_74fa14c6d0e940a4_biobb_curves_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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@@ -340,7 +340,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_74fa14c6d0e940a4_biobb_curves_py.html b/coverage/z_74fa14c6d0e940a4_biobb_curves_py.html
index 6a33639d..67598d37 100644
--- a/coverage/z_74fa14c6d0e940a4_biobb_curves_py.html
+++ b/coverage/z_74fa14c6d0e940a4_biobb_curves_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_74fa14c6d0e940a4_canal_unzip_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -392,7 +392,7 @@ <h2>
             <a class="nav" href="z_74fa14c6d0e940a4_canal_unzip_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_74fa14c6d0e940a4_canal_unzip_py.html b/coverage/z_74fa14c6d0e940a4_canal_unzip_py.html
index 7fdab669..43f5501d 100644
--- a/coverage/z_74fa14c6d0e940a4_canal_unzip_py.html
+++ b/coverage/z_74fa14c6d0e940a4_canal_unzip_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_3afbcd666ed82c91___init___py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -98,212 +98,213 @@ <h2>
     <p class="pln"><span class="n"><a id="t16" href="#t16">16</a></span><span class="t">    <span class="str">"""</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t17" href="#t17">17</a></span><span class="t"><span class="str">    | biobb_dna CanalUnzip</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t18" href="#t18">18</a></span><span class="t"><span class="str">    | Tool for extracting biobb_canal output files.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t19" href="#t19">19</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t20" href="#t20">20</a></span><span class="t"><span class="str">    Args:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t21" href="#t21">21</a></span><span class="t"><span class="str">        input_zip_file (str): Zip file with Canal output files. File type: input. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/data/curvesplus/canal_output.zip>`_. Accepted formats: zip (edam:format_3987).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t22" href="#t22">22</a></span><span class="t"><span class="str">        output_path (str): Canal output file contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/curvesplus/canal_unzip_output.ser>`_. Accepted formats: ser (edam:format_2330), his (edam:format_3905), cor (edam:format_3465).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t23" href="#t23">23</a></span><span class="t"><span class="str">        output_list_path (str) (Optional): Text file with a list of all Canal output files contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/curvesplus/canal_unzip_output.txt>`_. Accepted formats: txt (edam:format_2330).</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t24" href="#t24">24</a></span><span class="t"><span class="str">        properties (dic):</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t25" href="#t25">25</a></span><span class="t"><span class="str">            * **type** (*str*) - (None) Type of file. Values: series, histo, corr.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t26" href="#t26">26</a></span><span class="t"><span class="str">            * **helpar_name** (*str*) - (None) Helical parameter name, only for 'series' and 'histo' types. Values: alphaC, alphaW, ampC, ampW, ax-bend, betaC, betaW, buckle, chiC, chiW, curv, deltaC, deltaW, epsilC, epsilW, gammaC, gammaW, h-ris, h-twi, inclin, majd, majw, mind, minw, opening, phaseC, phaseW, propel, reg, rise, roll, shear, shift, slide, stagger, stretch, tbend, tilt, tip, twist, xdisp, ydisp, zetaC, zetaW.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t27" href="#t27">27</a></span><span class="t"><span class="str">            * **correlation** (*str*) - (None) Correlation indexes separated by underscore (ie '98_165'), only for 'corr' type.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t28" href="#t28">28</a></span><span class="t"><span class="str">            * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t29" href="#t29">29</a></span><span class="t"><span class="str">            * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t30" href="#t30">30</a></span><span class="t"><span class="str">            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t31" href="#t31">31</a></span><span class="t"><span class="str">    Examples:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t32" href="#t32">32</a></span><span class="t"><span class="str">        This is a use example of how to use the building block from Python::</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t33" href="#t33">33</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t34" href="#t34">34</a></span><span class="t"><span class="str">            from biobb_dna.curvesplus.canal_unzip import canal_unzip</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t35" href="#t35">35</a></span><span class="t"><span class="str">            prop = {</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t36" href="#t36">36</a></span><span class="t"><span class="str">                'type': 'series',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t37" href="#t37">37</a></span><span class="t"><span class="str">                'helpar_name': 'alphaC'</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t38" href="#t38">38</a></span><span class="t"><span class="str">            }</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t39" href="#t39">39</a></span><span class="t"><span class="str">            canal_unzip(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t40" href="#t40">40</a></span><span class="t"><span class="str">                input_zip_file='/path/to/canal/output.zip',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t41" href="#t41">41</a></span><span class="t"><span class="str">                output_path='/path/to/output.ser',</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t42" href="#t42">42</a></span><span class="t"><span class="str">                output_list_path='/path/to/output.txt'</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t43" href="#t43">43</a></span><span class="t"><span class="str">                properties=prop)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t44" href="#t44">44</a></span><span class="t"><span class="str">    Info:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t45" href="#t45">45</a></span><span class="t"><span class="str">        * wrapped_software:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t46" href="#t46">46</a></span><span class="t"><span class="str">            * name: In house</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t47" href="#t47">47</a></span><span class="t"><span class="str">            * license: Apache-2.0</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t48" href="#t48">48</a></span><span class="t"><span class="str">        * ontology:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t49" href="#t49">49</a></span><span class="t"><span class="str">            * name: EDAM</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t50" href="#t50">50</a></span><span class="t"><span class="str">            * schema: http://edamontology.org/EDAM.owl</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t51" href="#t51">51</a></span><span class="t"><span class="str">    """</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t52" href="#t52">52</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t53" href="#t53">53</a></span><span class="t">    <span class="key">def</span> <span class="nam">__init__</span><span class="op">(</span><span class="nam">self</span><span class="op">,</span> <span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t54" href="#t54">54</a></span><span class="t">                 <span class="nam">output_path</span><span class="op">,</span> <span class="nam">output_list_path</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="nam">properties</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t55" href="#t55">55</a></span><span class="t">        <span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span> <span class="key">or</span> <span class="op">{</span><span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t56" href="#t56">56</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t57" href="#t57">57</a></span><span class="t">        <span class="com"># Call parent class constructor</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t58" href="#t58">58</a></span><span class="t">        <span class="nam">super</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">__init__</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t59" href="#t59">59</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">locals_var_dict</span> <span class="op">=</span> <span class="nam">locals</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">copy</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t60" href="#t60">60</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t61" href="#t61">61</a></span><span class="t">        <span class="com"># Input/Output files</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t62" href="#t62">62</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">io_dict</span> <span class="op">=</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t63" href="#t63">63</a></span><span class="t">            <span class="str">'in'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t64" href="#t64">64</a></span><span class="t">                <span class="str">'input_zip_file'</span><span class="op">:</span> <span class="nam">input_zip_file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t65" href="#t65">65</a></span><span class="t">            <span class="op">}</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t66" href="#t66">66</a></span><span class="t">            <span class="str">'out'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t67" href="#t67">67</a></span><span class="t">                <span class="str">'output_path'</span><span class="op">:</span> <span class="nam">output_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t68" href="#t68">68</a></span><span class="t">                <span class="str">'output_list_path'</span><span class="op">:</span> <span class="nam">output_list_path</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t69" href="#t69">69</a></span><span class="t">            <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t70" href="#t70">70</a></span><span class="t">        <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t71" href="#t71">71</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t72" href="#t72">72</a></span><span class="t">        <span class="com"># Properties specific for BB</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t73" href="#t73">73</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'type'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t74" href="#t74">74</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'helpar_name'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t75" href="#t75">75</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'correlation'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t76" href="#t76">76</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t77" href="#t77">77</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t78" href="#t78">78</a></span><span class="t">        <span class="com"># Check the properties</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t79" href="#t79">79</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_properties</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t80" href="#t80">80</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t81" href="#t81">81</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t82" href="#t82">82</a></span><span class="t">    <span class="op">@</span><span class="nam">launchlogger</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t83" href="#t83">83</a></span><span class="t">    <span class="key">def</span> <span class="nam">launch</span><span class="op">(</span><span class="nam">self</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t84" href="#t84">84</a></span><span class="t">        <span class="str">"""Execute the :class:`CanalUnzip &lt;biobb_dna.curvesplus.canal_unzip.CanalUnzip>` object."""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t85" href="#t85">85</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t86" href="#t86">86</a></span><span class="t">        <span class="com"># Setup Biobb</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t87" href="#t87">87</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">check_restart</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t88" href="#t88">88</a></span><span class="t">            <span class="key">return</span> <span class="num">0</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t89" href="#t89">89</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">stage_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t90" href="#t90">90</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t91" href="#t91">91</a></span><span class="t">        <span class="com"># Check that both properties are set</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t92" href="#t92">92</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t93" href="#t93">93</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Property 'type' is mandatory to run CanalUnzip. Please set it."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t94" href="#t94">94</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t95" href="#t95">95</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t96" href="#t96">96</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t97" href="#t97">97</a></span><span class="t">        <span class="com"># Check that helpar_name is set if type is series or histo</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t98" href="#t98">98</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">in</span> <span class="op">[</span><span class="str">"series"</span><span class="op">,</span> <span class="str">"histo"</span><span class="op">]</span> <span class="key">and</span> <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t99" href="#t99">99</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Property 'helpar_name' is mandatory to run CanalUnzip with type 'series' or 'histo'. Please set it."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t100" href="#t100">100</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t101" href="#t101">101</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t102" href="#t102">102</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t103" href="#t103">103</a></span><span class="t">        <span class="com"># Check that correlation is set if type is corr</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t104" href="#t104">104</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">==</span> <span class="str">"corr"</span> <span class="key">and</span> <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t105" href="#t105">105</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Property 'correlation' is mandatory to run CanalUnzip with type 'corr'. Please set it."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t106" href="#t106">106</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t107" href="#t107">107</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t108" href="#t108">108</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t109" href="#t109">109</a></span><span class="t">        <span class="nam">extensions</span> <span class="op">=</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t110" href="#t110">110</a></span><span class="t">            <span class="str">"series"</span><span class="op">:</span> <span class="str">"ser"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t111" href="#t111">111</a></span><span class="t">            <span class="str">"histo"</span><span class="op">:</span> <span class="str">"his"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t112" href="#t112">112</a></span><span class="t">            <span class="str">"corr"</span><span class="op">:</span> <span class="str">"cor"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t113" href="#t113">113</a></span><span class="t">        <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t114" href="#t114">114</a></span><span class="t">        <span class="com"># Check that the type is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t115" href="#t115">115</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">not</span> <span class="key">in</span> <span class="nam">extensions</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t116" href="#t116">116</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Type {self.type} not valid. Valid types are: {', '.join(extensions.keys())}."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t117" href="#t117">117</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t118" href="#t118">118</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t119" href="#t119">119</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t120" href="#t120">120</a></span><span class="t">        <span class="com"># generate sufix</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t121" href="#t121">121</a></span><span class="t">        <span class="nam">sufix</span> <span class="op">=</span> <span class="str">""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t122" href="#t122">122</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">==</span> <span class="str">"corr"</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t123" href="#t123">123</a></span><span class="t">            <span class="com"># Check that the correlation is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t124" href="#t124">124</a></span><span class="t">            <span class="nam">pattern</span> <span class="op">=</span> <span class="str">r'\d+_\d+'</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t125" href="#t125">125</a></span><span class="t">            <span class="key">if</span> <span class="key">not</span> <span class="nam">re</span><span class="op">.</span><span class="nam">match</span><span class="op">(</span><span class="nam">pattern</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t126" href="#t126">126</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Correlation {self.correlation} not valid. It should match the pattern &lt;number_number>."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t127" href="#t127">127</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t128" href="#t128">128</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t129" href="#t129">129</a></span><span class="t">            <span class="nam">sufix</span> <span class="op">=</span> <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t130" href="#t130">130</a></span><span class="t">        <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t131" href="#t131">131</a></span><span class="t">            <span class="com"># Check that the helpar_name is valid</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t132" href="#t132">132</a></span><span class="t">            <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span> <span class="key">not</span> <span class="key">in</span> <span class="op">[</span><span class="str">"alphaC"</span><span class="op">,</span> <span class="str">"alphaW"</span><span class="op">,</span> <span class="str">"ampC"</span><span class="op">,</span> <span class="str">"ampW"</span><span class="op">,</span> <span class="str">"ax-bend"</span><span class="op">,</span> <span class="str">"betaC"</span><span class="op">,</span> <span class="str">"betaW"</span><span class="op">,</span> <span class="str">"buckle"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t133" href="#t133">133</a></span><span class="t">                                        <span class="str">"chiC"</span><span class="op">,</span> <span class="str">"chiW"</span><span class="op">,</span> <span class="str">"curv"</span><span class="op">,</span> <span class="str">"deltaC"</span><span class="op">,</span> <span class="str">"deltaW"</span><span class="op">,</span> <span class="str">"epsilC"</span><span class="op">,</span> <span class="str">"epsilW"</span><span class="op">,</span> <span class="str">"gammaC"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t134" href="#t134">134</a></span><span class="t">                                        <span class="str">"gammaW"</span><span class="op">,</span> <span class="str">"h-ris"</span><span class="op">,</span> <span class="str">"h-twi"</span><span class="op">,</span> <span class="str">"inclin"</span><span class="op">,</span> <span class="str">"majd"</span><span class="op">,</span> <span class="str">"majw"</span><span class="op">,</span> <span class="str">"mind"</span><span class="op">,</span> <span class="str">"minw"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t135" href="#t135">135</a></span><span class="t">                                        <span class="str">"opening"</span><span class="op">,</span> <span class="str">"phaseC"</span><span class="op">,</span> <span class="str">"phaseW"</span><span class="op">,</span> <span class="str">"propel"</span><span class="op">,</span> <span class="str">"reg"</span><span class="op">,</span> <span class="str">"rise"</span><span class="op">,</span> <span class="str">"roll"</span><span class="op">,</span> <span class="str">"shear"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t136" href="#t136">136</a></span><span class="t">                                        <span class="str">"shift"</span><span class="op">,</span> <span class="str">"slide"</span><span class="op">,</span> <span class="str">"stagger"</span><span class="op">,</span> <span class="str">"stretch"</span><span class="op">,</span> <span class="str">"tbend"</span><span class="op">,</span> <span class="str">"tilt"</span><span class="op">,</span> <span class="str">"tip"</span><span class="op">,</span> <span class="str">"twist"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t137" href="#t137">137</a></span><span class="t">                                        <span class="str">"xdisp"</span><span class="op">,</span> <span class="str">"ydisp"</span><span class="op">,</span> <span class="str">"zetaC"</span><span class="op">,</span> <span class="str">"zetaW"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t138" href="#t138">138</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Parameter {self.helpar_name} not valid. Valid parameters are: alphaC, alphaW, ampC, ampW, ax-bend, betaC, betaW, buckle, chiC, chiW, curv, deltaC, deltaW, epsilC, epsilW, gammaC, gammaW, h-ris, h-twi, inclin, majd, majw, mind, minw, opening, phaseC, phaseW, propel, reg, rise, roll, shear, shift, slide, stagger, stretch, tbend, tilt, tip, twist, xdisp, ydisp, zetaC, zetaW."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t139" href="#t139">139</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t140" href="#t140">140</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t141" href="#t141">141</a></span><span class="t">            <span class="nam">sufix</span> <span class="op">=</span> <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t142" href="#t142">142</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t143" href="#t143">143</a></span><span class="t">        <span class="com"># Generate the filename</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t144" href="#t144">144</a></span><span class="t">        <span class="nam">filename</span> <span class="op">=</span> <span class="str">f"canal_output_{sufix}.{extensions[self.type]}"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t145" href="#t145">145</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t146" href="#t146">146</a></span><span class="t">        <span class="com"># Unzip the file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t147" href="#t147">147</a></span><span class="t">        <span class="key">with</span> <span class="nam">zipfile</span><span class="op">.</span><span class="nam">ZipFile</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"in"</span><span class="op">]</span><span class="op">[</span><span class="str">"input_zip_file"</span><span class="op">]</span><span class="op">,</span> <span class="str">'r'</span><span class="op">)</span> <span class="key">as</span> <span class="nam">zip_ref</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t148" href="#t148">148</a></span><span class="t">            <span class="com"># Check if the file exists in the zip file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t149" href="#t149">149</a></span><span class="t">            <span class="key">if</span> <span class="nam">filename</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t150" href="#t150">150</a></span><span class="t">                <span class="com"># Extract the file</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t151" href="#t151">151</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f'{filename} exists, copying into {self.stage_io_dict["out"]["output_path"]}.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t152" href="#t152">152</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t153" href="#t153">153</a></span><span class="t">                <span class="key">with</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">open</span><span class="op">(</span><span class="nam">filename</span><span class="op">)</span> <span class="key">as</span> <span class="nam">source</span><span class="op">,</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_path"</span><span class="op">]</span><span class="op">,</span> <span class="str">"wb"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">target</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t154" href="#t154">154</a></span><span class="t">                    <span class="nam">shutil</span><span class="op">.</span><span class="nam">copyfileobj</span><span class="op">(</span><span class="nam">source</span><span class="op">,</span> <span class="nam">target</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t155" href="#t155">155</a></span><span class="t">            <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t156" href="#t156">156</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"File {filename} not found in the zip file."</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t157" href="#t157">157</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t158" href="#t158">158</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t159" href="#t159">159</a></span><span class="t">            <span class="com"># Write the list of files</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t160" href="#t160">160</a></span><span class="t">            <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t161" href="#t161">161</a></span><span class="t">                <span class="key">with</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">,</span> <span class="str">"w"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">f</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t162" href="#t162">162</a></span><span class="t">                    <span class="key">for</span> <span class="nam">name</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t163" href="#t163">163</a></span><span class="t">                        <span class="nam">f</span><span class="op">.</span><span class="nam">write</span><span class="op">(</span><span class="str">f"{name}\n"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t164" href="#t164">164</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t165" href="#t165">165</a></span><span class="t">        <span class="com"># Run Biobb block</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t166" href="#t166">166</a></span><span class="t">        <span class="com"># self.run_biobb()</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t167" href="#t167">167</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t168" href="#t168">168</a></span><span class="t">        <span class="com"># Copy files to host</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t169" href="#t169">169</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">copy_to_host</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t170" href="#t170">170</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t171" href="#t171">171</a></span><span class="t">        <span class="com"># Remove temporary file(s)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t172" href="#t172">172</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">tmp_files</span><span class="op">.</span><span class="nam">extend</span><span class="op">(</span><span class="op">[</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t173" href="#t173">173</a></span><span class="t">            <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">"unique_dir"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t174" href="#t174">174</a></span><span class="t">        <span class="op">]</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t175" href="#t175">175</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">remove_tmp_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t176" href="#t176">176</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t177" href="#t177">177</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="nam">output_files_created</span><span class="op">=</span><span class="key">True</span><span class="op">,</span> <span class="nam">raise_exception</span><span class="op">=</span><span class="key">False</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t178" href="#t178">178</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t179" href="#t179">179</a></span><span class="t">        <span class="key">return</span> <span class="nam">self</span><span class="op">.</span><span class="nam">return_code</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t180" href="#t180">180</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t19" href="#t19">19</a></span><span class="t"><span class="str">    | Unzips a Canal output file contained within a zip file.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t20" href="#t20">20</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t21" href="#t21">21</a></span><span class="t"><span class="str">    Args:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t22" href="#t22">22</a></span><span class="t"><span class="str">        input_zip_file (str): Zip file with Canal output files. File type: input. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/data/curvesplus/canal_output.zip>`_. Accepted formats: zip (edam:format_3987).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t23" href="#t23">23</a></span><span class="t"><span class="str">        output_path (str): Canal output file contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/curvesplus/canal_unzip_output.ser>`_. Accepted formats: ser (edam:format_2330), his (edam:format_3905), cor (edam:format_3465).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t24" href="#t24">24</a></span><span class="t"><span class="str">        output_list_path (str) (Optional): Text file with a list of all Canal output files contained within input_zip_file. File type: output. `Sample file &lt;https://raw.githubusercontent.com/bioexcel/biobb_dna/master/biobb_dna/test/reference/curvesplus/canal_unzip_output.txt>`_. Accepted formats: txt (edam:format_2330).</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t25" href="#t25">25</a></span><span class="t"><span class="str">        properties (dic):</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t26" href="#t26">26</a></span><span class="t"><span class="str">            * **type** (*str*) - (None) Type of file. Values: series, histo, corr.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t27" href="#t27">27</a></span><span class="t"><span class="str">            * **helpar_name** (*str*) - (None) Helical parameter name, only for 'series' and 'histo' types. Values: alphaC, alphaW, ampC, ampW, ax-bend, betaC, betaW, buckle, chiC, chiW, curv, deltaC, deltaW, epsilC, epsilW, gammaC, gammaW, h-ris, h-twi, inclin, majd, majw, mind, minw, opening, phaseC, phaseW, propel, reg, rise, roll, shear, shift, slide, stagger, stretch, tbend, tilt, tip, twist, xdisp, ydisp, zetaC, zetaW.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t28" href="#t28">28</a></span><span class="t"><span class="str">            * **correlation** (*str*) - (None) Correlation indexes separated by underscore (ie '98_165'), only for 'corr' type.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t29" href="#t29">29</a></span><span class="t"><span class="str">            * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t30" href="#t30">30</a></span><span class="t"><span class="str">            * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t31" href="#t31">31</a></span><span class="t"><span class="str">            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t32" href="#t32">32</a></span><span class="t"><span class="str">    Examples:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t33" href="#t33">33</a></span><span class="t"><span class="str">        This is a use example of how to use the building block from Python::</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t34" href="#t34">34</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t35" href="#t35">35</a></span><span class="t"><span class="str">            from biobb_dna.curvesplus.canal_unzip import canal_unzip</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t36" href="#t36">36</a></span><span class="t"><span class="str">            prop = {</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t37" href="#t37">37</a></span><span class="t"><span class="str">                'type': 'series',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t38" href="#t38">38</a></span><span class="t"><span class="str">                'helpar_name': 'alphaC'</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t39" href="#t39">39</a></span><span class="t"><span class="str">            }</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t40" href="#t40">40</a></span><span class="t"><span class="str">            canal_unzip(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t41" href="#t41">41</a></span><span class="t"><span class="str">                input_zip_file='/path/to/canal/output.zip',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t42" href="#t42">42</a></span><span class="t"><span class="str">                output_path='/path/to/output.ser',</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t43" href="#t43">43</a></span><span class="t"><span class="str">                output_list_path='/path/to/output.txt'</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t44" href="#t44">44</a></span><span class="t"><span class="str">                properties=prop)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t45" href="#t45">45</a></span><span class="t"><span class="str">    Info:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t46" href="#t46">46</a></span><span class="t"><span class="str">        * wrapped_software:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t47" href="#t47">47</a></span><span class="t"><span class="str">            * name: In house</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t48" href="#t48">48</a></span><span class="t"><span class="str">            * license: Apache-2.0</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t49" href="#t49">49</a></span><span class="t"><span class="str">        * ontology:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t50" href="#t50">50</a></span><span class="t"><span class="str">            * name: EDAM</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t51" href="#t51">51</a></span><span class="t"><span class="str">            * schema: http://edamontology.org/EDAM.owl</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t52" href="#t52">52</a></span><span class="t"><span class="str">    """</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t53" href="#t53">53</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t54" href="#t54">54</a></span><span class="t">    <span class="key">def</span> <span class="nam">__init__</span><span class="op">(</span><span class="nam">self</span><span class="op">,</span> <span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t55" href="#t55">55</a></span><span class="t">                 <span class="nam">output_path</span><span class="op">,</span> <span class="nam">output_list_path</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="nam">properties</span><span class="op">=</span><span class="key">None</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t56" href="#t56">56</a></span><span class="t">        <span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span> <span class="key">or</span> <span class="op">{</span><span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t57" href="#t57">57</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t58" href="#t58">58</a></span><span class="t">        <span class="com"># Call parent class constructor</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t59" href="#t59">59</a></span><span class="t">        <span class="nam">super</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">__init__</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t60" href="#t60">60</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">locals_var_dict</span> <span class="op">=</span> <span class="nam">locals</span><span class="op">(</span><span class="op">)</span><span class="op">.</span><span class="nam">copy</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t61" href="#t61">61</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t62" href="#t62">62</a></span><span class="t">        <span class="com"># Input/Output files</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t63" href="#t63">63</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">io_dict</span> <span class="op">=</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t64" href="#t64">64</a></span><span class="t">            <span class="str">'in'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t65" href="#t65">65</a></span><span class="t">                <span class="str">'input_zip_file'</span><span class="op">:</span> <span class="nam">input_zip_file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t66" href="#t66">66</a></span><span class="t">            <span class="op">}</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t67" href="#t67">67</a></span><span class="t">            <span class="str">'out'</span><span class="op">:</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t68" href="#t68">68</a></span><span class="t">                <span class="str">'output_path'</span><span class="op">:</span> <span class="nam">output_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t69" href="#t69">69</a></span><span class="t">                <span class="str">'output_list_path'</span><span class="op">:</span> <span class="nam">output_list_path</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t70" href="#t70">70</a></span><span class="t">            <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t71" href="#t71">71</a></span><span class="t">        <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t72" href="#t72">72</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t73" href="#t73">73</a></span><span class="t">        <span class="com"># Properties specific for BB</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t74" href="#t74">74</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'type'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t75" href="#t75">75</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'helpar_name'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t76" href="#t76">76</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span> <span class="op">=</span> <span class="nam">properties</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">'correlation'</span><span class="op">,</span> <span class="key">None</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t77" href="#t77">77</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">properties</span> <span class="op">=</span> <span class="nam">properties</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t78" href="#t78">78</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t79" href="#t79">79</a></span><span class="t">        <span class="com"># Check the properties</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t80" href="#t80">80</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_properties</span><span class="op">(</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t81" href="#t81">81</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t82" href="#t82">82</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t83" href="#t83">83</a></span><span class="t">    <span class="op">@</span><span class="nam">launchlogger</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t84" href="#t84">84</a></span><span class="t">    <span class="key">def</span> <span class="nam">launch</span><span class="op">(</span><span class="nam">self</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t85" href="#t85">85</a></span><span class="t">        <span class="str">"""Execute the :class:`CanalUnzip &lt;biobb_dna.curvesplus.canal_unzip.CanalUnzip>` object."""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t86" href="#t86">86</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t87" href="#t87">87</a></span><span class="t">        <span class="com"># Setup Biobb</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t88" href="#t88">88</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">check_restart</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t89" href="#t89">89</a></span><span class="t">            <span class="key">return</span> <span class="num">0</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t90" href="#t90">90</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">stage_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t91" href="#t91">91</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t92" href="#t92">92</a></span><span class="t">        <span class="com"># Check that both properties are set</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t93" href="#t93">93</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t94" href="#t94">94</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Property 'type' is mandatory to run CanalUnzip. Please set it."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t95" href="#t95">95</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t96" href="#t96">96</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t97" href="#t97">97</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t98" href="#t98">98</a></span><span class="t">        <span class="com"># Check that helpar_name is set if type is series or histo</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t99" href="#t99">99</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">in</span> <span class="op">[</span><span class="str">"series"</span><span class="op">,</span> <span class="str">"histo"</span><span class="op">]</span> <span class="key">and</span> <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t100" href="#t100">100</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Property 'helpar_name' is mandatory to run CanalUnzip with type 'series' or 'histo'. Please set it."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t101" href="#t101">101</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t102" href="#t102">102</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t103" href="#t103">103</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t104" href="#t104">104</a></span><span class="t">        <span class="com"># Check that correlation is set if type is corr</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t105" href="#t105">105</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">==</span> <span class="str">"corr"</span> <span class="key">and</span> <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span> <span class="key">is</span> <span class="key">None</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t106" href="#t106">106</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">"Property 'correlation' is mandatory to run CanalUnzip with type 'corr'. Please set it."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t107" href="#t107">107</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t108" href="#t108">108</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t109" href="#t109">109</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t110" href="#t110">110</a></span><span class="t">        <span class="nam">extensions</span> <span class="op">=</span> <span class="op">{</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t111" href="#t111">111</a></span><span class="t">            <span class="str">"series"</span><span class="op">:</span> <span class="str">"ser"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t112" href="#t112">112</a></span><span class="t">            <span class="str">"histo"</span><span class="op">:</span> <span class="str">"his"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t113" href="#t113">113</a></span><span class="t">            <span class="str">"corr"</span><span class="op">:</span> <span class="str">"cor"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t114" href="#t114">114</a></span><span class="t">        <span class="op">}</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t115" href="#t115">115</a></span><span class="t">        <span class="com"># Check that the type is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t116" href="#t116">116</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="key">not</span> <span class="key">in</span> <span class="nam">extensions</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t117" href="#t117">117</a></span><span class="t">            <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Type {self.type} not valid. Valid types are: {', '.join(extensions.keys())}."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t118" href="#t118">118</a></span><span class="t">                   <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t119" href="#t119">119</a></span><span class="t">            <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t120" href="#t120">120</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t121" href="#t121">121</a></span><span class="t">        <span class="com"># generate sufix</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t122" href="#t122">122</a></span><span class="t">        <span class="nam">sufix</span> <span class="op">=</span> <span class="str">""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t123" href="#t123">123</a></span><span class="t">        <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">type</span> <span class="op">==</span> <span class="str">"corr"</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t124" href="#t124">124</a></span><span class="t">            <span class="com"># Check that the correlation is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t125" href="#t125">125</a></span><span class="t">            <span class="nam">pattern</span> <span class="op">=</span> <span class="str">r'\d+_\d+'</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t126" href="#t126">126</a></span><span class="t">            <span class="key">if</span> <span class="key">not</span> <span class="nam">re</span><span class="op">.</span><span class="nam">match</span><span class="op">(</span><span class="nam">pattern</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t127" href="#t127">127</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Correlation {self.correlation} not valid. It should match the pattern &lt;number_number>."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t128" href="#t128">128</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t129" href="#t129">129</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t130" href="#t130">130</a></span><span class="t">            <span class="nam">sufix</span> <span class="op">=</span> <span class="nam">self</span><span class="op">.</span><span class="nam">correlation</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t131" href="#t131">131</a></span><span class="t">        <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t132" href="#t132">132</a></span><span class="t">            <span class="com"># Check that the helpar_name is valid</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t133" href="#t133">133</a></span><span class="t">            <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span> <span class="key">not</span> <span class="key">in</span> <span class="op">[</span><span class="str">"alphaC"</span><span class="op">,</span> <span class="str">"alphaW"</span><span class="op">,</span> <span class="str">"ampC"</span><span class="op">,</span> <span class="str">"ampW"</span><span class="op">,</span> <span class="str">"ax-bend"</span><span class="op">,</span> <span class="str">"betaC"</span><span class="op">,</span> <span class="str">"betaW"</span><span class="op">,</span> <span class="str">"buckle"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t134" href="#t134">134</a></span><span class="t">                                        <span class="str">"chiC"</span><span class="op">,</span> <span class="str">"chiW"</span><span class="op">,</span> <span class="str">"curv"</span><span class="op">,</span> <span class="str">"deltaC"</span><span class="op">,</span> <span class="str">"deltaW"</span><span class="op">,</span> <span class="str">"epsilC"</span><span class="op">,</span> <span class="str">"epsilW"</span><span class="op">,</span> <span class="str">"gammaC"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t135" href="#t135">135</a></span><span class="t">                                        <span class="str">"gammaW"</span><span class="op">,</span> <span class="str">"h-ris"</span><span class="op">,</span> <span class="str">"h-twi"</span><span class="op">,</span> <span class="str">"inclin"</span><span class="op">,</span> <span class="str">"majd"</span><span class="op">,</span> <span class="str">"majw"</span><span class="op">,</span> <span class="str">"mind"</span><span class="op">,</span> <span class="str">"minw"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t136" href="#t136">136</a></span><span class="t">                                        <span class="str">"opening"</span><span class="op">,</span> <span class="str">"phaseC"</span><span class="op">,</span> <span class="str">"phaseW"</span><span class="op">,</span> <span class="str">"propel"</span><span class="op">,</span> <span class="str">"reg"</span><span class="op">,</span> <span class="str">"rise"</span><span class="op">,</span> <span class="str">"roll"</span><span class="op">,</span> <span class="str">"shear"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t137" href="#t137">137</a></span><span class="t">                                        <span class="str">"shift"</span><span class="op">,</span> <span class="str">"slide"</span><span class="op">,</span> <span class="str">"stagger"</span><span class="op">,</span> <span class="str">"stretch"</span><span class="op">,</span> <span class="str">"tbend"</span><span class="op">,</span> <span class="str">"tilt"</span><span class="op">,</span> <span class="str">"tip"</span><span class="op">,</span> <span class="str">"twist"</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t138" href="#t138">138</a></span><span class="t">                                        <span class="str">"xdisp"</span><span class="op">,</span> <span class="str">"ydisp"</span><span class="op">,</span> <span class="str">"zetaC"</span><span class="op">,</span> <span class="str">"zetaW"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t139" href="#t139">139</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"Parameter {self.helpar_name} not valid. Valid parameters are: alphaC, alphaW, ampC, ampW, ax-bend, betaC, betaW, buckle, chiC, chiW, curv, deltaC, deltaW, epsilC, epsilW, gammaC, gammaW, h-ris, h-twi, inclin, majd, majw, mind, minw, opening, phaseC, phaseW, propel, reg, rise, roll, shear, shift, slide, stagger, stretch, tbend, tilt, tip, twist, xdisp, ydisp, zetaC, zetaW."</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t140" href="#t140">140</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t141" href="#t141">141</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t142" href="#t142">142</a></span><span class="t">            <span class="nam">sufix</span> <span class="op">=</span> <span class="nam">self</span><span class="op">.</span><span class="nam">helpar_name</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t143" href="#t143">143</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t144" href="#t144">144</a></span><span class="t">        <span class="com"># Generate the filename</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t145" href="#t145">145</a></span><span class="t">        <span class="nam">filename</span> <span class="op">=</span> <span class="str">f"canal_output_{sufix}.{extensions[self.type]}"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t146" href="#t146">146</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t147" href="#t147">147</a></span><span class="t">        <span class="com"># Unzip the file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t148" href="#t148">148</a></span><span class="t">        <span class="key">with</span> <span class="nam">zipfile</span><span class="op">.</span><span class="nam">ZipFile</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"in"</span><span class="op">]</span><span class="op">[</span><span class="str">"input_zip_file"</span><span class="op">]</span><span class="op">,</span> <span class="str">'r'</span><span class="op">)</span> <span class="key">as</span> <span class="nam">zip_ref</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t149" href="#t149">149</a></span><span class="t">            <span class="com"># Check if the file exists in the zip file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t150" href="#t150">150</a></span><span class="t">            <span class="key">if</span> <span class="nam">filename</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t151" href="#t151">151</a></span><span class="t">                <span class="com"># Extract the file</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t152" href="#t152">152</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f'{filename} exists, copying into {self.stage_io_dict["out"]["output_path"]}.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t153" href="#t153">153</a></span><span class="t">                       <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t154" href="#t154">154</a></span><span class="t">                <span class="key">with</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">open</span><span class="op">(</span><span class="nam">filename</span><span class="op">)</span> <span class="key">as</span> <span class="nam">source</span><span class="op">,</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_path"</span><span class="op">]</span><span class="op">,</span> <span class="str">"wb"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">target</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t155" href="#t155">155</a></span><span class="t">                    <span class="nam">shutil</span><span class="op">.</span><span class="nam">copyfileobj</span><span class="op">(</span><span class="nam">source</span><span class="op">,</span> <span class="nam">target</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t156" href="#t156">156</a></span><span class="t">            <span class="key">else</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t157" href="#t157">157</a></span><span class="t">                <span class="nam">fu</span><span class="op">.</span><span class="nam">log</span><span class="op">(</span><span class="str">f"File {filename} not found in the zip file."</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">out_log</span><span class="op">,</span> <span class="nam">self</span><span class="op">.</span><span class="nam">global_log</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t158" href="#t158">158</a></span><span class="t">                <span class="nam">exit</span><span class="op">(</span><span class="num">1</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t159" href="#t159">159</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t160" href="#t160">160</a></span><span class="t">            <span class="com"># Write the list of files</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t161" href="#t161">161</a></span><span class="t">            <span class="key">if</span> <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t162" href="#t162">162</a></span><span class="t">                <span class="key">with</span> <span class="nam">open</span><span class="op">(</span><span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">[</span><span class="str">"out"</span><span class="op">]</span><span class="op">[</span><span class="str">"output_list_path"</span><span class="op">]</span><span class="op">,</span> <span class="str">"w"</span><span class="op">)</span> <span class="key">as</span> <span class="nam">f</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t163" href="#t163">163</a></span><span class="t">                    <span class="key">for</span> <span class="nam">name</span> <span class="key">in</span> <span class="nam">zip_ref</span><span class="op">.</span><span class="nam">namelist</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t164" href="#t164">164</a></span><span class="t">                        <span class="nam">f</span><span class="op">.</span><span class="nam">write</span><span class="op">(</span><span class="str">f"{name}\n"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t165" href="#t165">165</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t166" href="#t166">166</a></span><span class="t">        <span class="com"># Run Biobb block</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t167" href="#t167">167</a></span><span class="t">        <span class="com"># self.run_biobb()</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t168" href="#t168">168</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t169" href="#t169">169</a></span><span class="t">        <span class="com"># Copy files to host</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t170" href="#t170">170</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">copy_to_host</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t171" href="#t171">171</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t172" href="#t172">172</a></span><span class="t">        <span class="com"># Remove temporary file(s)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t173" href="#t173">173</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">tmp_files</span><span class="op">.</span><span class="nam">extend</span><span class="op">(</span><span class="op">[</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t174" href="#t174">174</a></span><span class="t">            <span class="nam">self</span><span class="op">.</span><span class="nam">stage_io_dict</span><span class="op">.</span><span class="nam">get</span><span class="op">(</span><span class="str">"unique_dir"</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t175" href="#t175">175</a></span><span class="t">        <span class="op">]</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t176" href="#t176">176</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">remove_tmp_files</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t177" href="#t177">177</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t178" href="#t178">178</a></span><span class="t">        <span class="nam">self</span><span class="op">.</span><span class="nam">check_arguments</span><span class="op">(</span><span class="nam">output_files_created</span><span class="op">=</span><span class="key">True</span><span class="op">,</span> <span class="nam">raise_exception</span><span class="op">=</span><span class="key">False</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t179" href="#t179">179</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t180" href="#t180">180</a></span><span class="t">        <span class="key">return</span> <span class="nam">self</span><span class="op">.</span><span class="nam">return_code</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t181" href="#t181">181</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t182" href="#t182">182</a></span><span class="t"><span class="key">def</span> <span class="nam">canal_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t183" href="#t183">183</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t184" href="#t184">184</a></span><span class="t">        <span class="nam">output_path</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t185" href="#t185">185</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">:</span> <span class="nam">str</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t186" href="#t186">186</a></span><span class="t">        <span class="nam">properties</span><span class="op">:</span> <span class="nam">dict</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t187" href="#t187">187</a></span><span class="t">        <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t188" href="#t188">188</a></span><span class="t">    <span class="str">"""Create :class:`CanalUnzip &lt;biobb_dna.curvesplus.canal_unzip.CanalUnzip>` class and</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t189" href="#t189">189</a></span><span class="t"><span class="str">    execute the :meth:`launch() &lt;biobb_dna.curvesplus.canal_unzip.CanalUnzip.launch>` method."""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t190" href="#t190">190</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t191" href="#t191">191</a></span><span class="t">    <span class="key">return</span> <span class="nam">CanalUnzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t192" href="#t192">192</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t193" href="#t193">193</a></span><span class="t">        <span class="nam">output_path</span><span class="op">=</span><span class="nam">output_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t194" href="#t194">194</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t195" href="#t195">195</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span><span class="op">.</span><span class="nam">launch</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t196" href="#t196">196</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t182" href="#t182">182</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t183" href="#t183">183</a></span><span class="t"><span class="key">def</span> <span class="nam">canal_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t184" href="#t184">184</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t185" href="#t185">185</a></span><span class="t">        <span class="nam">output_path</span><span class="op">:</span> <span class="nam">str</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t186" href="#t186">186</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">:</span> <span class="nam">str</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t187" href="#t187">187</a></span><span class="t">        <span class="nam">properties</span><span class="op">:</span> <span class="nam">dict</span> <span class="op">=</span> <span class="key">None</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t188" href="#t188">188</a></span><span class="t">        <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span> <span class="op">-></span> <span class="nam">int</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t189" href="#t189">189</a></span><span class="t">    <span class="str">"""Create :class:`CanalUnzip &lt;biobb_dna.curvesplus.canal_unzip.CanalUnzip>` class and</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t190" href="#t190">190</a></span><span class="t"><span class="str">    execute the :meth:`launch() &lt;biobb_dna.curvesplus.canal_unzip.CanalUnzip.launch>` method."""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t191" href="#t191">191</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t192" href="#t192">192</a></span><span class="t">    <span class="key">return</span> <span class="nam">CanalUnzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t193" href="#t193">193</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t194" href="#t194">194</a></span><span class="t">        <span class="nam">output_path</span><span class="op">=</span><span class="nam">output_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t195" href="#t195">195</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t196" href="#t196">196</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">,</span> <span class="op">**</span><span class="nam">kwargs</span><span class="op">)</span><span class="op">.</span><span class="nam">launch</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t197" href="#t197">197</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t198" href="#t198">198</a></span><span class="t"><span class="key">def</span> <span class="nam">main</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t199" href="#t199">199</a></span><span class="t">    <span class="str">"""Command line execution of this building block. Please check the command line documentation."""</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t200" href="#t200">200</a></span><span class="t">    <span class="nam">parser</span> <span class="op">=</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">ArgumentParser</span><span class="op">(</span><span class="nam">description</span><span class="op">=</span><span class="str">'Tool for extracting biobb_canal output files.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t201" href="#t201">201</a></span><span class="t">                                     <span class="nam">formatter_class</span><span class="op">=</span><span class="key">lambda</span> <span class="nam">prog</span><span class="op">:</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">RawTextHelpFormatter</span><span class="op">(</span><span class="nam">prog</span><span class="op">,</span> <span class="nam">width</span><span class="op">=</span><span class="num">99999</span><span class="op">)</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t202" href="#t202">202</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--config'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span> <span class="nam">help</span><span class="op">=</span><span class="str">'Configuration file'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t203" href="#t203">203</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t204" href="#t204">204</a></span><span class="t">    <span class="nam">required_args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument_group</span><span class="op">(</span><span class="str">'required arguments'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t205" href="#t205">205</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--input_zip_file'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t206" href="#t206">206</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'Zip file with Canal output files. Accepted formats: zip.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t207" href="#t207">207</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_path'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t208" href="#t208">208</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'Canal output file contained within input_zip_file. Accepted formats: ser, his, cor.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t209" href="#t209">209</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_list_path'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t210" href="#t210">210</a></span><span class="t">                        <span class="nam">help</span><span class="op">=</span><span class="str">'Text file with a list of all Canal output files contained within input_zip_file. Accepted formats: txt.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t211" href="#t211">211</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t212" href="#t212">212</a></span><span class="t">    <span class="nam">args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">parse_args</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t213" href="#t213">213</a></span><span class="t">    <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="op">=</span> <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="key">or</span> <span class="str">"{}"</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t214" href="#t214">214</a></span><span class="t">    <span class="nam">properties</span> <span class="op">=</span> <span class="nam">settings</span><span class="op">.</span><span class="nam">ConfReader</span><span class="op">(</span><span class="nam">config</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">config</span><span class="op">)</span><span class="op">.</span><span class="nam">get_prop_dic</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t215" href="#t215">215</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t216" href="#t216">216</a></span><span class="t">    <span class="nam">canal_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t217" href="#t217">217</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t218" href="#t218">218</a></span><span class="t">        <span class="nam">output_path</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t219" href="#t219">219</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t220" href="#t220">220</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
-    <p class="pln"><span class="n"><a id="t221" href="#t221">221</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t198" href="#t198">198</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t199" href="#t199">199</a></span><span class="t"><span class="key">def</span> <span class="nam">main</span><span class="op">(</span><span class="op">)</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t200" href="#t200">200</a></span><span class="t">    <span class="str">"""Command line execution of this building block. Please check the command line documentation."""</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t201" href="#t201">201</a></span><span class="t">    <span class="nam">parser</span> <span class="op">=</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">ArgumentParser</span><span class="op">(</span><span class="nam">description</span><span class="op">=</span><span class="str">'Tool for extracting biobb_canal output files.'</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t202" href="#t202">202</a></span><span class="t">                                     <span class="nam">formatter_class</span><span class="op">=</span><span class="key">lambda</span> <span class="nam">prog</span><span class="op">:</span> <span class="nam">argparse</span><span class="op">.</span><span class="nam">RawTextHelpFormatter</span><span class="op">(</span><span class="nam">prog</span><span class="op">,</span> <span class="nam">width</span><span class="op">=</span><span class="num">99999</span><span class="op">)</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t203" href="#t203">203</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--config'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span> <span class="nam">help</span><span class="op">=</span><span class="str">'Configuration file'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t204" href="#t204">204</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t205" href="#t205">205</a></span><span class="t">    <span class="nam">required_args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument_group</span><span class="op">(</span><span class="str">'required arguments'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t206" href="#t206">206</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--input_zip_file'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t207" href="#t207">207</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'Zip file with Canal output files. Accepted formats: zip.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t208" href="#t208">208</a></span><span class="t">    <span class="nam">required_args</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_path'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">True</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t209" href="#t209">209</a></span><span class="t">                               <span class="nam">help</span><span class="op">=</span><span class="str">'Canal output file contained within input_zip_file. Accepted formats: ser, his, cor.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t210" href="#t210">210</a></span><span class="t">    <span class="nam">parser</span><span class="op">.</span><span class="nam">add_argument</span><span class="op">(</span><span class="str">'--output_list_path'</span><span class="op">,</span> <span class="nam">required</span><span class="op">=</span><span class="key">False</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t211" href="#t211">211</a></span><span class="t">                        <span class="nam">help</span><span class="op">=</span><span class="str">'Text file with a list of all Canal output files contained within input_zip_file. Accepted formats: txt.'</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t212" href="#t212">212</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t213" href="#t213">213</a></span><span class="t">    <span class="nam">args</span> <span class="op">=</span> <span class="nam">parser</span><span class="op">.</span><span class="nam">parse_args</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t214" href="#t214">214</a></span><span class="t">    <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="op">=</span> <span class="nam">args</span><span class="op">.</span><span class="nam">config</span> <span class="key">or</span> <span class="str">"{}"</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t215" href="#t215">215</a></span><span class="t">    <span class="nam">properties</span> <span class="op">=</span> <span class="nam">settings</span><span class="op">.</span><span class="nam">ConfReader</span><span class="op">(</span><span class="nam">config</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">config</span><span class="op">)</span><span class="op">.</span><span class="nam">get_prop_dic</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t216" href="#t216">216</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t217" href="#t217">217</a></span><span class="t">    <span class="nam">canal_unzip</span><span class="op">(</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t218" href="#t218">218</a></span><span class="t">        <span class="nam">input_zip_file</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">input_zip_file</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t219" href="#t219">219</a></span><span class="t">        <span class="nam">output_path</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t220" href="#t220">220</a></span><span class="t">        <span class="nam">output_list_path</span><span class="op">=</span><span class="nam">args</span><span class="op">.</span><span class="nam">output_list_path</span><span class="op">,</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t221" href="#t221">221</a></span><span class="t">        <span class="nam">properties</span><span class="op">=</span><span class="nam">properties</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
     <p class="pln"><span class="n"><a id="t222" href="#t222">222</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
-    <p class="run"><span class="n"><a id="t223" href="#t223">223</a></span><span class="t"><span class="key">if</span> <span class="nam">__name__</span> <span class="op">==</span> <span class="str">'__main__'</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
-    <p class="mis show_mis"><span class="n"><a id="t224" href="#t224">224</a></span><span class="t">    <span class="nam">main</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
+    <p class="pln"><span class="n"><a id="t223" href="#t223">223</a></span><span class="t">&nbsp;</span><span class="r"></span></p>
+    <p class="run"><span class="n"><a id="t224" href="#t224">224</a></span><span class="t"><span class="key">if</span> <span class="nam">__name__</span> <span class="op">==</span> <span class="str">'__main__'</span><span class="op">:</span>&nbsp;</span><span class="r"></span></p>
+    <p class="mis show_mis"><span class="n"><a id="t225" href="#t225">225</a></span><span class="t">    <span class="nam">main</span><span class="op">(</span><span class="op">)</span>&nbsp;</span><span class="r"></span></p>
 </main>
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     <div class="content">
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             <a class="nav" href="z_3afbcd666ed82c91___init___py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8030ef0ea5bfd6aa_test_canal_py.html b/coverage/z_8030ef0ea5bfd6aa_test_canal_py.html
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+++ b/coverage/z_8030ef0ea5bfd6aa_test_canal_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_8030ef0ea5bfd6aa_test_canal_unzip_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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+            created at 2024-06-27 11:25 +0000
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             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -110,7 +110,7 @@ <h2>
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8030ef0ea5bfd6aa_test_canal_unzip_py.html b/coverage/z_8030ef0ea5bfd6aa_test_canal_unzip_py.html
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+++ b/coverage/z_8030ef0ea5bfd6aa_test_canal_unzip_py.html
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             <a id="nextFileLink" class="nav" href="z_8030ef0ea5bfd6aa_test_canion_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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+            created at 2024-06-27 11:25 +0000
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             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -112,7 +112,7 @@ <h2>
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8030ef0ea5bfd6aa_test_canion_py.html b/coverage/z_8030ef0ea5bfd6aa_test_canion_py.html
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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@@ -110,7 +110,7 @@ <h2>
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8030ef0ea5bfd6aa_test_curves_py.html b/coverage/z_8030ef0ea5bfd6aa_test_curves_py.html
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+++ b/coverage/z_8030ef0ea5bfd6aa_test_curves_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_100f5897bddc1993_test_averages_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -112,7 +112,7 @@ <h2>
             <a class="nav" href="z_100f5897bddc1993_test_averages_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_833b0317e3c43dca___init___py.html b/coverage/z_833b0317e3c43dca___init___py.html
index 2aff6dc0..74909090 100644
--- a/coverage/z_833b0317e3c43dca___init___py.html
+++ b/coverage/z_833b0317e3c43dca___init___py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_833b0317e3c43dca_constants_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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         <aside class="hidden">
             <button type="button" class="button_next_chunk" data-shortcut="j"></button>
@@ -89,7 +89,7 @@ <h2>
             <a class="nav" href="z_833b0317e3c43dca_constants_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_833b0317e3c43dca_constants_py.html b/coverage/z_833b0317e3c43dca_constants_py.html
index 782afa5f..3f35ba0a 100644
--- a/coverage/z_833b0317e3c43dca_constants_py.html
+++ b/coverage/z_833b0317e3c43dca_constants_py.html
@@ -65,7 +65,7 @@ <h2>
             <a id="nextFileLink" class="nav" href="z_833b0317e3c43dca_loader_py.html">&#xbb; next</a>
             &nbsp; &nbsp; &nbsp;
             <a class="nav" href="https://coverage.readthedocs.io/en/7.5.4">coverage.py v7.5.4</a>,
-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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@@ -162,7 +162,7 @@ <h2>
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_833b0317e3c43dca_loader_py.html b/coverage/z_833b0317e3c43dca_loader_py.html
index 2071ee13..439fd518 100644
--- a/coverage/z_833b0317e3c43dca_loader_py.html
+++ b/coverage/z_833b0317e3c43dca_loader_py.html
@@ -65,7 +65,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_833b0317e3c43dca_transform_py.html b/coverage/z_833b0317e3c43dca_transform_py.html
index 9f1d469a..c27e1268 100644
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+++ b/coverage/z_833b0317e3c43dca_transform_py.html
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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@@ -102,7 +102,7 @@ <h2>
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8a2a7f872cf1434f___init___py.html b/coverage/z_8a2a7f872cf1434f___init___py.html
index 83762044..3928816b 100644
--- a/coverage/z_8a2a7f872cf1434f___init___py.html
+++ b/coverage/z_8a2a7f872cf1434f___init___py.html
@@ -65,7 +65,7 @@ <h2>
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+            created at 2024-06-27 11:25 +0000
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@@ -94,7 +94,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8a2a7f872cf1434f_interbpcorr_py.html b/coverage/z_8a2a7f872cf1434f_interbpcorr_py.html
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@@ -65,7 +65,7 @@ <h2>
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             &nbsp; &nbsp; &nbsp;
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-            created at 2024-06-27 10:11 +0000
+            created at 2024-06-27 11:25 +0000
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@@ -419,7 +419,7 @@ <h2>
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8a2a7f872cf1434f_interhpcorr_py.html b/coverage/z_8a2a7f872cf1434f_interhpcorr_py.html
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+            created at 2024-06-27 11:25 +0000
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+            created at 2024-06-27 11:25 +0000
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diff --git a/coverage/z_8a2a7f872cf1434f_interseqcorr_py.html b/coverage/z_8a2a7f872cf1434f_interseqcorr_py.html
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+            created at 2024-06-27 11:25 +0000
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images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/bipopulations/bipop.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/backbone/bipop_ref.jpg\n     IMAGE_A HASH: ff8981818181c9ff SIZE: 64 bits\n     IMAGE_B HASH: ff8981818180c9ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 1 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:391 Executing biobb_dna.backbone.bipopulations Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:82 /tmp/biobb/unitests_190/bipopulations/sandbox_f840ed82-ca8d-4e44-b561-ca069461daff directory successfully created\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_epsilC.ser to /tmp/biobb/unitests_190/bipopulations/sandbox_f840ed82-ca8d-4e44-b561-ca069461daff\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_epsilW.ser to /tmp/biobb/unitests_190/bipopulations/sandbox_f840ed82-ca8d-4e44-b561-ca069461daff\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_zetaC.ser to /tmp/biobb/unitests_190/bipopulations/sandbox_f840ed82-ca8d-4e44-b561-ca069461daff\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_zetaW.ser to /tmp/biobb/unitests_190/bipopulations/sandbox_f840ed82-ca8d-4e44-b561-ca069461daff\nINFO     /tmp/biobb/unitests_190/bipopulations/bipopulations_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/bipopulations/sandbox_f840ed82-ca8d-4e44-b561-ca069461daff&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_backbone/test_canonical_alpha_gamma.py::TestCanonicalAlphaGamma::test_canonicalag&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_backbone/test_canonical_alpha_gamma.py::TestCanonicalAlphaGamma::test_canonicalag&#34;, &#34;duration&#34;: &#34;450 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_backbone/test_canonical_alpha_gamma.py::TestCanonicalAlphaGamma::test_canonicalag&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;450 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:21,469 [MainThread  ] [INFO ]  Executing biobb_dna.backbone.canonicalag Version: 4.2.4\n2024-06-27 10:11:21,469 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb directory successfully created\n2024-06-27 10:11:21,470 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaC.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\n2024-06-27 10:11:21,471 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaW.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\n2024-06-27 10:11:21,472 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaC.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\n2024-06-27 10:11:21,473 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaW.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\n2024-06-27 10:11:21,833 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/canonicalag/canonag.csv\nChecking if empty file: /tmp/biobb/unitests_190/canonicalag/canonag.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/canonicalag/canonag.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/backbone/canonag_ref.jpg\n     IMAGE_A HASH: ff8081818180f9ff SIZE: 64 bits\n     IMAGE_B HASH: ff8081818180f9ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:391 Executing biobb_dna.backbone.canonicalag Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:82 /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb directory successfully created\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaC.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaW.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaC.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaW.ser to /tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb\nINFO     /tmp/biobb/unitests_190/canonicalag/canonicalag_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/canonicalag/sandbox_aedf5d0c-436e-42b2-9937-248d020578bb&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_backbone/test_puckering.py::TestPuckering::test_puckering&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_backbone/test_puckering.py::TestPuckering::test_puckering&#34;, &#34;duration&#34;: &#34;553 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_backbone/test_puckering.py::TestPuckering::test_puckering&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;553 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:21,920 [MainThread  ] [INFO ]  Executing biobb_dna.backbone.puckering Version: 4.2.4\n2024-06-27 10:11:21,920 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc directory successfully created\n2024-06-27 10:11:21,921 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseC.ser to /tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc\n2024-06-27 10:11:21,922 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseW.ser to /tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc\n2024-06-27 10:11:22,387 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/puckering/puckering.csv\nChecking if empty file: /tmp/biobb/unitests_190/puckering/puckering.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/puckering/puckering.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/backbone/puckering_ref.jpg\n     IMAGE_A HASH: eb8181808081ffff SIZE: 64 bits\n     IMAGE_B HASH: eb8181808081ffff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/puckering/puckering_log.out:file_utils.py:391 Executing biobb_dna.backbone.puckering Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/puckering/puckering_log.out:file_utils.py:82 /tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc directory successfully created\nINFO     /tmp/biobb/unitests_190/puckering/puckering_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseC.ser to /tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc\nINFO     /tmp/biobb/unitests_190/puckering/puckering_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseW.ser to /tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc\nINFO     /tmp/biobb/unitests_190/puckering/puckering_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/puckering/sandbox_a8a01821-8171-4868-9b09-6b6636564abc&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterHelparCorrelation::test_helparcorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterHelparCorrelation::test_helparcorrelation&#34;, &#34;duration&#34;: &#34;284 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterHelparCorrelation::test_helparcorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;284 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:22,477 [MainThread  ] [INFO ]  Executing biobb_dna.interbp_correlations.interhpcorr Version: 4.2.4\n2024-06-27 10:11:22,478 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078 directory successfully created\n2024-06-27 10:11:22,478 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\n2024-06-27 10:11:22,478 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\n2024-06-27 10:11:22,479 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\n2024-06-27 10:11:22,479 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\n2024-06-27 10:11:22,479 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\n2024-06-27 10:11:22,480 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\n2024-06-27 10:11:22,676 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/interhpcorr/inter_hpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_190/interhpcorr/inter_hpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/interhpcorr/inter_hpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/inter_hpcorr_ref.jpg\n     IMAGE_A HASH: ff83868890a1c0ff SIZE: 64 bits\n     IMAGE_B HASH: ff83868890a1c0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Executing biobb_dna.interbp_correlations.interhpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:82 /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078 directory successfully created\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078\nINFO     /tmp/biobb/unitests_190/interhpcorr/log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/interhpcorr/sandbox_d24f3388-0b78-447b-b47a-5144350ec078&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterSequenceCorrelation::test_sequencecorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterSequenceCorrelation::test_sequencecorrelation&#34;, &#34;duration&#34;: &#34;420 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterSequenceCorrelation::test_sequencecorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;420 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:22,762 [MainThread  ] [INFO ]  Executing biobb_dna.interbp_correlations.interseqcorr Version: 4.2.4\n2024-06-27 10:11:22,762 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/interseqcorr/sandbox_4c2060ef-8490-457d-81ae-3a5efd823ab1 directory successfully created\n2024-06-27 10:11:22,763 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_190/interseqcorr/sandbox_4c2060ef-8490-457d-81ae-3a5efd823ab1\n2024-06-27 10:11:23,095 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/interseqcorr/sandbox_4c2060ef-8490-457d-81ae-3a5efd823ab1&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/interseqcorr/inter_seqcorr.csv\nChecking if empty file: /tmp/biobb/unitests_190/interseqcorr/inter_seqcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/interseqcorr/inter_seqcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/inter_seqcorr_roll.jpg\n     IMAGE_A HASH: ff8080889080c0ff SIZE: 64 bits\n     IMAGE_B HASH: ff8080889080c0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/interseqcorr/interseqcorr_log.out:file_utils.py:391 Executing biobb_dna.interbp_correlations.interseqcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/interseqcorr/interseqcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_190/interseqcorr/sandbox_4c2060ef-8490-457d-81ae-3a5efd823ab1 directory successfully created\nINFO     /tmp/biobb/unitests_190/interseqcorr/interseqcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_190/interseqcorr/sandbox_4c2060ef-8490-457d-81ae-3a5efd823ab1\nINFO     /tmp/biobb/unitests_190/interseqcorr/interseqcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/interseqcorr/sandbox_4c2060ef-8490-457d-81ae-3a5efd823ab1&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterBasepairCorrelation::test_basepaircorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterBasepairCorrelation::test_basepaircorrelation&#34;, &#34;duration&#34;: &#34;859 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterBasepairCorrelation::test_basepaircorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;859 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:23,184 [MainThread  ] [INFO ]  Executing biobb_dna.interbp_correlations.interbpcorr Version: 4.2.4\n2024-06-27 10:11:23,184 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a directory successfully created\n2024-06-27 10:11:23,185 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shift.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\n2024-06-27 10:11:23,186 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_slide.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\n2024-06-27 10:11:23,186 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_rise.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\n2024-06-27 10:11:23,187 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_tilt.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\n2024-06-27 10:11:23,188 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\n2024-06-27 10:11:23,189 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_twist.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\n2024-06-27 10:11:23,950 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/interbpcorr/inter_bpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_190/interbpcorr/inter_bpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/interbpcorr/inter_bpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/inter_bpcorr_ref.jpg\n     IMAGE_A HASH: fd6d6dfffd6c0183 SIZE: 64 bits\n     IMAGE_B HASH: fd6d6dfffd6c0183 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Executing biobb_dna.interbp_correlations.interbpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a directory successfully created\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shift.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_slide.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_rise.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_tilt.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_twist.ser to /tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a\nINFO     /tmp/biobb/unitests_190/interbpcorr/interbpcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/interbpcorr/sandbox_2e3e94b5-12bb-4c95-a795-ed49904b547a&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraHelparCorrelation::test_helparcorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraHelparCorrelation::test_helparcorrelation&#34;, &#34;duration&#34;: &#34;266 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraHelparCorrelation::test_helparcorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;266 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:24,042 [MainThread  ] [INFO ]  Executing biobb_dna.intrabp_correlations.intrahpcorr Version: 4.2.4\n2024-06-27 10:11:24,042 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8 directory successfully created\n2024-06-27 10:11:24,043 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_shear_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\n2024-06-27 10:11:24,043 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stretch_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\n2024-06-27 10:11:24,043 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stagger_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\n2024-06-27 10:11:24,043 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_buckle_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\n2024-06-27 10:11:24,044 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_propel_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\n2024-06-27 10:11:24,044 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_opening_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\n2024-06-27 10:11:24,229 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/intrahpcorr/intra_hpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_190/intrahpcorr/intra_hpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/intrahpcorr/intra_hpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/intra_hpcorr_ref.jpg\n     IMAGE_A HASH: fb81848890a0e0ff SIZE: 64 bits\n     IMAGE_B HASH: fb81848890a0e0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Executing biobb_dna.intrabp_correlations.intrahpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:82 /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8 directory successfully created\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_shear_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stretch_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stagger_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_buckle_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_propel_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_opening_A.csv to /tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8\nINFO     /tmp/biobb/unitests_190/intrahpcorr/log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/intrahpcorr/sandbox_6f0bde71-1b09-4acf-a273-e1328f4bf3d8&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_190\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraSequenceCorrelation::test_sequencecorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraSequenceCorrelation::test_sequencecorrelation&#34;, &#34;duration&#34;: &#34;344 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraSequenceCorrelation::test_sequencecorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;344 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:24,310 [MainThread  ] [INFO ]  Executing biobb_dna.intrabp_correlations.intraseqcorr Version: 4.2.4\n2024-06-27 10:11:24,311 [MainThread  ] [INFO ]  /tmp/biobb/unitests_190/intraseqcorr/sandbox_fec0e309-4e76-49f8-b01f-fd153fd3f677 directory successfully created\n2024-06-27 10:11:24,311 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_190/intraseqcorr/sandbox_fec0e309-4e76-49f8-b01f-fd153fd3f677\n2024-06-27 10:11:24,571 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_190/intraseqcorr/sandbox_fec0e309-4e76-49f8-b01f-fd153fd3f677&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_190/intraseqcorr/intra_seqcorr.csv\nChecking if empty file: /tmp/biobb/unitests_190/intraseqcorr/intra_seqcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_190/intraseqcorr/intra_seqcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/intra_seqcorr_buckle.jpg\n     IMAGE_A HASH: ff83848890a0c0ff SIZE: 64 bits\n     IMAGE_B HASH: ff83848890a0c0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_190/intraseqcorr/intraseqcorr_log.out:file_utils.py:391 Executing biobb_dna.intrabp_correlations.intraseqcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_190/intraseqcorr/intraseqcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_190/intraseqcorr/sandbox_fec0e309-4e76-49f8-b01f-fd153fd3f677 directory successfully created\nINFO     /tmp/biobb/unitests_190/intraseqcorr/intraseqcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_190/intraseqcorr/sandbox_fec0e309-4e76-49f8-b01f-fd153fd3f677\nINFO     /tmp/biobb/unitests_190/intraseqcorr/intraseqcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_190/intraseqcorr/sandbox_fec0e309-4e76-49f8-b01f-fd153fd3f677&amp;#x27;]\n\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraBasepairCorrelation::test_basepaircorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraBasepairCorrelation::test_basepaircorrelation&#34;, &#34;duration&#34;: &#34;00:00:01&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraBasepairCorrelation::test_basepaircorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:01&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:24,656 [MainThread  ] [INFO ]  Executing biobb_dna.intrabp_correlations.intrabpcorr Version: 4.2.4\n2024-06-27 10:11:24,657 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b directory successfully created\n2024-06-27 10:11:24,657 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shear.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\n2024-06-27 10:11:24,658 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stretch.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\n2024-06-27 10:11:24,659 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stagger.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\n2024-06-27 10:11:24,660 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\n2024-06-27 10:11:24,660 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_propel.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\n2024-06-27 10:11:24,661 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_opening.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\n2024-06-27 10:11:25,786 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/intrabpcorr/intra_bpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_191/intrabpcorr/intra_bpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/intrabpcorr/intra_bpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/intra_bpcorr_ref.jpg\n     IMAGE_A HASH: 01f5f7f7fcf40183 SIZE: 64 bits\n     IMAGE_B HASH: 01f5f7f7fcf40183 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Executing biobb_dna.intrabp_correlations.intrabpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b directory successfully created\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shear.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stretch.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stagger.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_propel.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_opening.ser to /tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b\nINFO     /tmp/biobb/unitests_191/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/intrabpcorr/sandbox_ba08f8ed-5bfe-4156-a419-2a31bea4ee0b&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_canal.py::TestCanal::test_canal&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_canal.py::TestCanal::test_canal&#34;, &#34;duration&#34;: &#34;00:00:07&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_canal.py::TestCanal::test_canal&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:07&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:25,878 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.biobb_canal Version: 4.2.4\n2024-06-27 10:11:25,878 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/biobb_canal/sandbox_3e8146e9-64da-4e61-849e-7a49dd2120d8 directory successfully created\n2024-06-27 10:11:25,891 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/curves_output.cda to /tmp/biobb/unitests_191/biobb_canal/sandbox_3e8146e9-64da-4e61-849e-7a49dd2120d8\n2024-06-27 10:11:25,891 [MainThread  ] [INFO ]  Creating command line with instructions and required arguments\n2024-06-27 10:11:25,891 [MainThread  ] [INFO ]  Canal &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canal_output,\n  cormin=0.6,\n  lev1=0,lev2=0,\n  itst=0,itnd=0,itdel=1,\n  histo=.t.,\n  series=.t.,\n  corr=.t.,\n&amp;amp;end\ncurves_output.cda CGCGAATTCGCG\n!\n\n2024-06-27 10:11:32,984 [MainThread  ] [INFO ]  Exit code 0\n\n2024-06-27 10:11:33,136 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/biobb_canal/sandbox_3e8146e9-64da-4e61-849e-7a49dd2120d8&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/biobb_canal/canal_output.zip\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.biobb_canal Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:file_utils.py:82 /tmp/biobb/unitests_191/biobb_canal/sandbox_3e8146e9-64da-4e61-849e-7a49dd2120d8 directory successfully created\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/curves_output.cda to /tmp/biobb/unitests_191/biobb_canal/sandbox_3e8146e9-64da-4e61-849e-7a49dd2120d8\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:file_utils.py:391 Creating command line with instructions and required arguments\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:cmd_wrapper.py:33 Canal &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canal_output,\n  cormin=0.6,\n  lev1=0,lev2=0,\n  itst=0,itnd=0,itdel=1,\n  histo=.t.,\n  series=.t.,\n  corr=.t.,\n&amp;amp;end\ncurves_output.cda CGCGAATTCGCG\n!\n\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:cmd_wrapper.py:50 Exit code 0\n\nINFO     /tmp/biobb/unitests_191/biobb_canal/biobb_canal_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/biobb_canal/sandbox_3e8146e9-64da-4e61-849e-7a49dd2120d8&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_canal_unzip.py::TestCanalUnzip::test_canal_unzip&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_canal_unzip.py::TestCanalUnzip::test_canal_unzip&#34;, &#34;duration&#34;: &#34;89 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_canal_unzip.py::TestCanalUnzip::test_canal_unzip&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;89 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:33,192 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.canal_unzip Version: 4.2.4\n2024-06-27 10:11:33,193 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb directory successfully created\n2024-06-27 10:11:33,225 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/canal_output.zip to /tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb\n2024-06-27 10:11:33,228 [MainThread  ] [INFO ]  canal_output_alphaC.his exists, copying into /tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb/canal_unzip_output.ser.\n2024-06-27 10:11:33,234 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/canal_unzip/canal_unzip_output.ser\nChecking if empty file: /tmp/biobb/unitests_191/canal_unzip/canal_unzip_output.txt\nComparing: \n        File_A: /tmp/biobb/unitests_191/canal_unzip/canal_unzip_output.ser\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/canal_unzip_output.ser\n        File_A hash: b&amp;#x27;\\r\\x84{\\xb8:rpBW\\xb4M\\x86\\xfd8I\\xfe\\xd3i\\x19CV_\\xd7\\x91\\xa5\\xf4\\xf4 \\xa6\\xed\\xc1\\xec&amp;#x27;\n        File_B hash: b&amp;#x27;\\r\\x84{\\xb8:rpBW\\xb4M\\x86\\xfd8I\\xfe\\xd3i\\x19CV_\\xd7\\x91\\xa5\\xf4\\xf4 \\xa6\\xed\\xc1\\xec&amp;#x27;\nComparing: \n        File_A: /tmp/biobb/unitests_191/canal_unzip/canal_unzip_output.txt\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/canal_unzip_output.txt\n        File_A hash: b&amp;#x27;\\x00&amp;gt;\\x1f\\x86\\x87\\xae]^K\\t\\xa5\\x9a3\\x17\\xf1\\x91P\\x97O\\x04q\\xd6\\xd3d\\n\\xec4j\\x1d\\x1a\\x82\\xa5&amp;#x27;\n        File_B hash: b&amp;#x27;\\x00&amp;gt;\\x1f\\x86\\x87\\xae]^K\\t\\xa5\\x9a3\\x17\\xf1\\x91P\\x97O\\x04q\\xd6\\xd3d\\n\\xec4j\\x1d\\x1a\\x82\\xa5&amp;#x27;\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/canal_unzip/canal_unzip_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.canal_unzip Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/canal_unzip/canal_unzip_log.out:file_utils.py:82 /tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb directory successfully created\nINFO     /tmp/biobb/unitests_191/canal_unzip/canal_unzip_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/canal_output.zip to /tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb\nINFO     /tmp/biobb/unitests_191/canal_unzip/canal_unzip_log.out:file_utils.py:391 canal_output_alphaC.his exists, copying into /tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb/canal_unzip_output.ser.\nINFO     /tmp/biobb/unitests_191/canal_unzip/canal_unzip_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/canal_unzip/sandbox_ded9683a-f6bc-4773-9a48-10bbb20699bb&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_canion.py::TestCanal::test_canion&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_canion.py::TestCanal::test_canion&#34;, &#34;duration&#34;: &#34;398 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_canion.py::TestCanal::test_canion&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;398 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:33,281 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.biobb_canion Version: 4.2.4\n2024-06-27 10:11:33,282 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172 directory successfully created\n2024-06-27 10:11:33,576 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_K.cdi to /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172\n2024-06-27 10:11:33,577 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA.afr to /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172\n2024-06-27 10:11:33,577 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_avg.pdb to /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172\n2024-06-27 10:11:33,577 [MainThread  ] [INFO ]  Creating command line with instructions and required arguments\n2024-06-27 10:11:33,577 [MainThread  ] [INFO ]  Canion &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canion_output,\n  dat=THGA_K,\n  axfrm=THGA,\n  solute=THGA_avg,\n  type=K+,\n  dlow=5.8,\n  dhig=7.2,\n  rlow=0,\n  rhig=18,\n  alow=0,\n  ahig=360,\n  itst=0,\n  itnd=0,\n  itdel=1,\n  rmsf=.f.,\n  circ=.f.,\n&amp;amp;end\n!\n\n2024-06-27 10:11:33,589 [MainThread  ] [INFO ]  Exit code 0\n\n2024-06-27 10:11:33,633 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/biobb_canion/canion_output.zip\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.biobb_canion Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:82 /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172 directory successfully created\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_K.cdi to /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA.afr to /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_avg.pdb to /tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:391 Creating command line with instructions and required arguments\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:cmd_wrapper.py:33 Canion &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canion_output,\n  dat=THGA_K,\n  axfrm=THGA,\n  solute=THGA_avg,\n  type=K+,\n  dlow=5.8,\n  dhig=7.2,\n  rlow=0,\n  rhig=18,\n  alow=0,\n  ahig=360,\n  itst=0,\n  itnd=0,\n  itdel=1,\n  rmsf=.f.,\n  circ=.f.,\n&amp;amp;end\n!\n\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:cmd_wrapper.py:50 Exit code 0\n\nINFO     /tmp/biobb/unitests_191/biobb_canion/biobb_canion_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/biobb_canion/sandbox_b88271e8-9e08-43fa-b28e-d060cc171172&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_curves.py::TestCurves::test_curves&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_curves.py::TestCurves::test_curves&#34;, &#34;duration&#34;: &#34;00:00:07&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_curves.py::TestCurves::test_curves&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:07&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:33,685 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.biobb_curves Version: 4.2.4\n2024-06-27 10:11:33,686 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0 directory successfully created\n2024-06-27 10:11:33,756 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.trj to /tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0\n2024-06-27 10:11:33,756 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.top to /tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0\n2024-06-27 10:11:33,758 [MainThread  ] [INFO ]  Appending provided topology to command\n2024-06-27 10:11:33,758 [MainThread  ] [INFO ]  Creating command line with instructions and required arguments\n2024-06-27 10:11:33,758 [MainThread  ] [INFO ]  Cur+ &amp;lt;&amp;lt;! \n&amp;amp;inp\n  file=structure.stripped.trj,\n  ftop=structure.stripped.top,\n  lis=&amp;#x27;curves_output&amp;#x27;,\n  lib=.curvesplus/standard,\n  ions=.t.,\n  test=.f.,\n  line=.f.,\n  fit=.t.,\n  axfrm=.f.,\n  itst=0,itnd=0,itdel=1,\n&amp;amp;end\n2 1 -1 0 0\n1:12\n24:13\n!\n\n2024-06-27 10:11:40,314 [MainThread  ] [INFO ]  Exit code 0\n\n2024-06-27 10:11:40,365 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/biobb_curves/curves_output.cda\nChecking if empty file: /tmp/biobb/unitests_191/biobb_curves/curves_output.lis\nChecking if empty file: /tmp/biobb/unitests_191/biobb_curves/curves_output.zip\nComparing ignoring lines containing this words: [2]\n     FILE_A: /tmp/biobb/unitests_191/biobb_curves/curves_output.lis\n     FILE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/curves_trj_output.lis\nThis is a ZIP comparison!\nUnzipping:\nCreating a unique_dir for: /tmp/biobb/unitests_191/biobb_curves/curves_output.zip\nCreating a unique_dir for: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/curves_trj_output.zip\nComparing: \n        File_A: a35c0231-6fc7-4df0-b245-31ad3e0f87f1/curves_output.cdi\n        File_B: 2dbc6eb7-66ef-490c-b62f-0b7ab5fa2382/curves_output.cdi\n        File_A hash: b&amp;#x27;\\xbf\\x13\\x93\\xa0\\xc8\\xba\\x96\\xaa\\xd5sy\\xda\\x0f\\xe1m|\\xab\\xd4\\x9c z\\x9a\\x9d\\xde\\x07\\x7f\\xe3\\x1c\\x0cf_h&amp;#x27;\n        File_B hash: b&amp;#x27;\\xbf\\x13\\x93\\xa0\\xc8\\xba\\x96\\xaa\\xd5sy\\xda\\x0f\\xe1m|\\xab\\xd4\\x9c z\\x9a\\x9d\\xde\\x07\\x7f\\xe3\\x1c\\x0cf_h&amp;#x27;\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.biobb_curves Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:82 /tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0 directory successfully created\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.trj to /tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.top to /tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:391 Appending provided topology to command\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:391 Creating command line with instructions and required arguments\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:cmd_wrapper.py:33 Cur+ &amp;lt;&amp;lt;! \n&amp;amp;inp\n  file=structure.stripped.trj,\n  ftop=structure.stripped.top,\n  lis=&amp;#x27;curves_output&amp;#x27;,\n  lib=.curvesplus/standard,\n  ions=.t.,\n  test=.f.,\n  line=.f.,\n  fit=.t.,\n  axfrm=.f.,\n  itst=0,itnd=0,itdel=1,\n&amp;amp;end\n2 1 -1 0 0\n1:12\n24:13\n!\n\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:cmd_wrapper.py:50 Exit code 0\n\nINFO     /tmp/biobb/unitests_191/biobb_curves/biobb_curves_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/biobb_curves/sandbox_03e1de2b-3c7a-4cf4-a9b0-d301fbcc9fa0&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_averages.py::TestAverages::test_helparaverages&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_averages.py::TestAverages::test_helparaverages&#34;, &#34;duration&#34;: &#34;253 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_averages.py::TestAverages::test_helparaverages&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;253 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:40,797 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_averages Version: 4.2.4\n2024-06-27 10:11:40,797 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/dna_averages/sandbox_ee34d5dd-b0f5-4db1-bf8c-d3b37384292e directory successfully created\n2024-06-27 10:11:40,798 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_191/dna_averages/sandbox_ee34d5dd-b0f5-4db1-bf8c-d3b37384292e\n2024-06-27 10:11:40,960 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_averages/sandbox_ee34d5dd-b0f5-4db1-bf8c-d3b37384292e&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/dna_averages/avg_out.csv\nChecking if empty file: /tmp/biobb/unitests_191/dna_averages/avg_out.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/dna_averages/avg_out.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/shift_avg.jpg\n     IMAGE_A HASH: c07e3e32163f3ee3 SIZE: 64 bits\n     IMAGE_B HASH: c07e3e32163f3ee3 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/dna_averages/dna_averages_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_averages Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/dna_averages/dna_averages_log.out:file_utils.py:82 /tmp/biobb/unitests_191/dna_averages/sandbox_ee34d5dd-b0f5-4db1-bf8c-d3b37384292e directory successfully created\nINFO     /tmp/biobb/unitests_191/dna_averages/dna_averages_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_191/dna_averages/sandbox_ee34d5dd-b0f5-4db1-bf8c-d3b37384292e\nINFO     /tmp/biobb/unitests_191/dna_averages/dna_averages_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_averages/sandbox_ee34d5dd-b0f5-4db1-bf8c-d3b37384292e&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_bimodality.py::TestBimodality::test_helparbimodality&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_bimodality.py::TestBimodality::test_helparbimodality&#34;, &#34;duration&#34;: &#34;548 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_bimodality.py::TestBimodality::test_helparbimodality&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;548 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:41,045 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_bimodality Version: 4.2.4\n2024-06-27 10:11:41,045 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/dna_bimodality/sandbox_ea579b77-6bab-4e26-8ee5-5a4987aba7c3 directory successfully created\n2024-06-27 10:11:41,046 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/series_shift_AT.csv to /tmp/biobb/unitests_191/dna_bimodality/sandbox_ea579b77-6bab-4e26-8ee5-5a4987aba7c3\n2024-06-27 10:11:41,546 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_bimodality/sandbox_ea579b77-6bab-4e26-8ee5-5a4987aba7c3&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/dna_bimodality/bimod_out.csv\nChecking if empty file: /tmp/biobb/unitests_191/dna_bimodality/bimod_out.jpg\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/dna_bimodality/dna_bimodality_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_bimodality Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/dna_bimodality/dna_bimodality_log.out:file_utils.py:82 /tmp/biobb/unitests_191/dna_bimodality/sandbox_ea579b77-6bab-4e26-8ee5-5a4987aba7c3 directory successfully created\nINFO     /tmp/biobb/unitests_191/dna_bimodality/dna_bimodality_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/series_shift_AT.csv to /tmp/biobb/unitests_191/dna_bimodality/sandbox_ea579b77-6bab-4e26-8ee5-5a4987aba7c3\nINFO     /tmp/biobb/unitests_191/dna_bimodality/dna_bimodality_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_bimodality/sandbox_ea579b77-6bab-4e26-8ee5-5a4987aba7c3&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_timeseries.py::TestTimeSeries::test_helpartimeseries&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_timeseries.py::TestTimeSeries::test_helpartimeseries&#34;, &#34;duration&#34;: &#34;00:00:04&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_timeseries.py::TestTimeSeries::test_helpartimeseries&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:04&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:41,595 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_timeseries Version: 4.2.4\n2024-06-27 10:11:41,595 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/dna_timeseries/sandbox_3f31cd1e-75e8-4c6f-b8d4-75a303b086ad directory successfully created\n2024-06-27 10:11:41,596 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_191/dna_timeseries/sandbox_3f31cd1e-75e8-4c6f-b8d4-75a303b086ad\n2024-06-27 10:11:45,663 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_timeseries/sandbox_3f31cd1e-75e8-4c6f-b8d4-75a303b086ad&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/dna_timeseries/timeseries_output.zip\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/dna_timeseries/dna_timeseries_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_timeseries Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/dna_timeseries/dna_timeseries_log.out:file_utils.py:82 /tmp/biobb/unitests_191/dna_timeseries/sandbox_3f31cd1e-75e8-4c6f-b8d4-75a303b086ad directory successfully created\nINFO     /tmp/biobb/unitests_191/dna_timeseries/dna_timeseries_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_191/dna_timeseries/sandbox_3f31cd1e-75e8-4c6f-b8d4-75a303b086ad\nINFO     /tmp/biobb/unitests_191/dna_timeseries/dna_timeseries_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_timeseries/sandbox_3f31cd1e-75e8-4c6f-b8d4-75a303b086ad&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_timeseries_unzip.py::TestCanalUnzip::test_dna_timeseries_unzip&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_timeseries_unzip.py::TestCanalUnzip::test_dna_timeseries_unzip&#34;, &#34;duration&#34;: &#34;123 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_timeseries_unzip.py::TestCanalUnzip::test_dna_timeseries_unzip&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;123 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:45,749 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_timeseries_unzip Version: 4.2.4\n2024-06-27 10:11:45,749 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374 directory successfully created\n2024-06-27 10:11:45,750 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/timeseries_output.zip to /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374\n2024-06-27 10:11:45,751 [MainThread  ] [INFO ]  hist_shift_6_AT.csv exists, copying into /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374/dna_timeseries_unzip.csv.\n2024-06-27 10:11:45,751 [MainThread  ] [INFO ]  hist_shift_6_AT.jpg exists, copying into /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374/dna_timeseries_unzip.jpg.\n2024-06-27 10:11:45,752 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip.csv\nChecking if empty file: /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip.jpg\nChecking if empty file: /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip.txt\nComparing: \n        File_A: /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip.csv\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/dna_timeseries_unzip.csv\n        File_A hash: b&amp;#x27;\\xa2W\\xf05tAU\\xa7\\x93\\xe2\\x12L\\xddq\\x86\\xcdN\\xf8\\xd6\\xf6\\x0cO\\x0bJu\\xa8\\tRO\\xc0lH&amp;#x27;\n        File_B hash: b&amp;#x27;\\xa2W\\xf05tAU\\xa7\\x93\\xe2\\x12L\\xddq\\x86\\xcdN\\xf8\\xd6\\xf6\\x0cO\\x0bJu\\xa8\\tRO\\xc0lH&amp;#x27;\nComparing: \n        File_A: /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip.txt\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/dna_timeseries_unzip.txt\n        File_A hash: b&amp;#x27;O\\xeeQ\\xcb\\xd3T\\xf3\\x9e\\xbc\\xa6\\xcb\\xd8\\xb6F\\x12r\\x12\\xb4I.\\xf9\\xa6/e}\\x85\\xf9\\x18\\x06\\xe18\\xd4&amp;#x27;\n        File_B hash: b&amp;#x27;O\\xeeQ\\xcb\\xd3T\\xf3\\x9e\\xbc\\xa6\\xcb\\xd8\\xb6F\\x12r\\x12\\xb4I.\\xf9\\xa6/e}\\x85\\xf9\\x18\\x06\\xe18\\xd4&amp;#x27;\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/dna_timeseries_unzip.jpg\n     IMAGE_A HASH: ffe7e7e7e7e3c3ff SIZE: 64 bits\n     IMAGE_B HASH: ffe7e7e7e7e3c3ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_timeseries_unzip Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:82 /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374 directory successfully created\nINFO     /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/timeseries_output.zip to /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374\nINFO     /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 hist_shift_6_AT.csv exists, copying into /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374/dna_timeseries_unzip.csv.\nINFO     /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 hist_shift_6_AT.jpg exists, copying into /tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374/dna_timeseries_unzip.jpg.\nINFO     /tmp/biobb/unitests_191/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/dna_timeseries_unzip/sandbox_7e459897-f01c-4d08-85f4-a441a0111374&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestAvgStiffness::test_averagestiffness&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestAvgStiffness::test_averagestiffness&#34;, &#34;duration&#34;: &#34;252 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestAvgStiffness::test_averagestiffness&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;252 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:45,837 [MainThread  ] [INFO ]  Executing biobb_dna.stiffness.average_stiffness Version: 4.2.4\n2024-06-27 10:11:45,837 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/average_stiffness/sandbox_184bb8a1-59d3-425f-9bd1-f428188037eb directory successfully created\n2024-06-27 10:11:45,838 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/canal_output_roll.ser to /tmp/biobb/unitests_191/average_stiffness/sandbox_184bb8a1-59d3-425f-9bd1-f428188037eb\n2024-06-27 10:11:46,006 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/average_stiffness/sandbox_184bb8a1-59d3-425f-9bd1-f428188037eb&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/average_stiffness/avgstiff.csv\nChecking if empty file: /tmp/biobb/unitests_191/average_stiffness/avgstiff.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/average_stiffness/avgstiff.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/stiffness/stiffavg_roll.jpg\n     IMAGE_A HASH: 017f7f7f1d7f7e80 SIZE: 64 bits\n     IMAGE_B HASH: 017f7f7f1d7f7e80 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/average_stiffness/average_stiffness_log.out:file_utils.py:391 Executing biobb_dna.stiffness.average_stiffness Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/average_stiffness/average_stiffness_log.out:file_utils.py:82 /tmp/biobb/unitests_191/average_stiffness/sandbox_184bb8a1-59d3-425f-9bd1-f428188037eb directory successfully created\nINFO     /tmp/biobb/unitests_191/average_stiffness/average_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/canal_output_roll.ser to /tmp/biobb/unitests_191/average_stiffness/sandbox_184bb8a1-59d3-425f-9bd1-f428188037eb\nINFO     /tmp/biobb/unitests_191/average_stiffness/average_stiffness_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/average_stiffness/sandbox_184bb8a1-59d3-425f-9bd1-f428188037eb&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestBasePairStiffness::test_basepairstiffness&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestBasePairStiffness::test_basepairstiffness&#34;, &#34;duration&#34;: &#34;318 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestBasePairStiffness::test_basepairstiffness&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;318 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 10:11:46,090 [MainThread  ] [INFO ]  Executing biobb_dna.stiffness.basepair_stiffness Version: 4.2.4\n2024-06-27 10:11:46,090 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11 directory successfully created\n2024-06-27 10:11:46,090 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\n2024-06-27 10:11:46,091 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\n2024-06-27 10:11:46,091 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\n2024-06-27 10:11:46,091 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\n2024-06-27 10:11:46,091 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\n2024-06-27 10:11:46,092 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\nChecking if empty file: /tmp/biobb/unitests_191/basepair_stiffness/bpstiff.csv\nChecking if empty file: /tmp/biobb/unitests_191/basepair_stiffness/bpstiff.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/basepair_stiffness/bpstiff.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/stiffness/stiffbp_ref.jpg\n     IMAGE_A HASH: ff8080909080ffff SIZE: 64 bits\n     IMAGE_B HASH: ff8080909080ffff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Executing biobb_dna.stiffness.basepair_stiffness Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:82 /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11 directory successfully created\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\nINFO     /tmp/biobb/unitests_191/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_191/basepair_stiffness/sandbox_aa0778ab-778e-47a8-aa74-5d75cd3ded11\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}]}, &#34;renderCollapsed&#34;: [&#34;passed&#34;], &#34;initialSort&#34;: &#34;result&#34;, &#34;title&#34;: &#34;report.html&#34;}"></div>
+    <div id="data-container" data-jsonblob="{&#34;environment&#34;: {&#34;Python&#34;: &#34;3.10.14&#34;, &#34;Platform&#34;: &#34;Linux-5.4.0-159-generic-x86_64-with-glibc2.31&#34;, &#34;Packages&#34;: {&#34;pytest&#34;: &#34;8.2.2&#34;, &#34;pluggy&#34;: &#34;1.5.0&#34;}, &#34;Plugins&#34;: {&#34;metadata&#34;: &#34;3.1.1&#34;, &#34;html&#34;: &#34;4.1.1&#34;, &#34;cov&#34;: &#34;5.0.0&#34;}, &#34;CI&#34;: &#34;true&#34;}, &#34;tests&#34;: {&#34;biobb_dna/test/unitests/test_backbone/test_bipopulations.py::TestBIPopulations::test_bipopulations&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_backbone/test_bipopulations.py::TestBIPopulations::test_bipopulations&#34;, &#34;duration&#34;: &#34;492 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_backbone/test_bipopulations.py::TestBIPopulations::test_bipopulations&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;492 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:30,808 [MainThread  ] [INFO ]  Executing biobb_dna.backbone.bipopulations Version: 4.2.4\n2024-06-27 11:25:30,809 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87 directory successfully created\n2024-06-27 11:25:30,810 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_epsilC.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\n2024-06-27 11:25:30,810 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_epsilW.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\n2024-06-27 11:25:30,811 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_zetaC.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\n2024-06-27 11:25:30,812 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_zetaW.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\n2024-06-27 11:25:31,208 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/bipopulations/bipop.csv\nChecking if empty file: /tmp/biobb/unitests_191/bipopulations/bipop.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/bipopulations/bipop.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/backbone/bipop_ref.jpg\n     IMAGE_A HASH: ff8981818181c9ff SIZE: 64 bits\n     IMAGE_B HASH: ff8981818180c9ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 1 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:391 Executing biobb_dna.backbone.bipopulations Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:82 /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87 directory successfully created\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_epsilC.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_epsilW.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_zetaC.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_zetaW.ser to /tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87\nINFO     /tmp/biobb/unitests_191/bipopulations/bipopulations_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/bipopulations/sandbox_e29b707a-ab1e-438a-868c-7baa46847b87&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_backbone/test_canonical_alpha_gamma.py::TestCanonicalAlphaGamma::test_canonicalag&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_backbone/test_canonical_alpha_gamma.py::TestCanonicalAlphaGamma::test_canonicalag&#34;, &#34;duration&#34;: &#34;446 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_backbone/test_canonical_alpha_gamma.py::TestCanonicalAlphaGamma::test_canonicalag&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;446 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:31,310 [MainThread  ] [INFO ]  Executing biobb_dna.backbone.canonicalag Version: 4.2.4\n2024-06-27 11:25:31,310 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c directory successfully created\n2024-06-27 11:25:31,311 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaC.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\n2024-06-27 11:25:31,311 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaW.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\n2024-06-27 11:25:31,312 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaC.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\n2024-06-27 11:25:31,313 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaW.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\n2024-06-27 11:25:31,673 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/canonicalag/canonag.csv\nChecking if empty file: /tmp/biobb/unitests_191/canonicalag/canonag.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/canonicalag/canonag.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/backbone/canonag_ref.jpg\n     IMAGE_A HASH: ff8081818180f9ff SIZE: 64 bits\n     IMAGE_B HASH: ff8081818180f9ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:391 Executing biobb_dna.backbone.canonicalag Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:82 /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c directory successfully created\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaC.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_alphaW.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaC.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_gammaW.ser to /tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c\nINFO     /tmp/biobb/unitests_191/canonicalag/canonicalag_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/canonicalag/sandbox_f7afca52-3499-4c9f-9974-061326c5241c&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_backbone/test_puckering.py::TestPuckering::test_puckering&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_backbone/test_puckering.py::TestPuckering::test_puckering&#34;, &#34;duration&#34;: &#34;547 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_backbone/test_puckering.py::TestPuckering::test_puckering&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;547 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:31,757 [MainThread  ] [INFO ]  Executing biobb_dna.backbone.puckering Version: 4.2.4\n2024-06-27 11:25:31,757 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb directory successfully created\n2024-06-27 11:25:31,758 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseC.ser to /tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb\n2024-06-27 11:25:31,759 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseW.ser to /tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb\n2024-06-27 11:25:32,219 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/puckering/puckering.csv\nChecking if empty file: /tmp/biobb/unitests_191/puckering/puckering.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/puckering/puckering.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/backbone/puckering_ref.jpg\n     IMAGE_A HASH: eb8181808081ffff SIZE: 64 bits\n     IMAGE_B HASH: eb8181808081ffff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/puckering/puckering_log.out:file_utils.py:391 Executing biobb_dna.backbone.puckering Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/puckering/puckering_log.out:file_utils.py:82 /tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb directory successfully created\nINFO     /tmp/biobb/unitests_191/puckering/puckering_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseC.ser to /tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb\nINFO     /tmp/biobb/unitests_191/puckering/puckering_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/backbone/canal_output_phaseW.ser to /tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb\nINFO     /tmp/biobb/unitests_191/puckering/puckering_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/puckering/sandbox_2cde5c64-af1f-41ef-83ef-a8808a7e6deb&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterHelparCorrelation::test_helparcorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterHelparCorrelation::test_helparcorrelation&#34;, &#34;duration&#34;: &#34;272 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterHelparCorrelation::test_helparcorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;272 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:32,306 [MainThread  ] [INFO ]  Executing biobb_dna.interbp_correlations.interhpcorr Version: 4.2.4\n2024-06-27 11:25:32,306 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3 directory successfully created\n2024-06-27 11:25:32,307 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\n2024-06-27 11:25:32,307 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\n2024-06-27 11:25:32,307 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\n2024-06-27 11:25:32,308 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\n2024-06-27 11:25:32,308 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\n2024-06-27 11:25:32,308 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\n2024-06-27 11:25:32,497 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/interhpcorr/inter_hpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_191/interhpcorr/inter_hpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/interhpcorr/inter_hpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/inter_hpcorr_ref.jpg\n     IMAGE_A HASH: ff83868890a1c0ff SIZE: 64 bits\n     IMAGE_B HASH: ff83868890a1c0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Executing biobb_dna.interbp_correlations.interhpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:82 /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3 directory successfully created\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3\nINFO     /tmp/biobb/unitests_191/interhpcorr/log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/interhpcorr/sandbox_11551b27-da42-4554-952a-437933ae3db3&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterSequenceCorrelation::test_sequencecorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterSequenceCorrelation::test_sequencecorrelation&#34;, &#34;duration&#34;: &#34;349 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterSequenceCorrelation::test_sequencecorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;349 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:32,578 [MainThread  ] [INFO ]  Executing biobb_dna.interbp_correlations.interseqcorr Version: 4.2.4\n2024-06-27 11:25:32,579 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/interseqcorr/sandbox_5e5490fe-3d30-4daa-9104-0d52159f2182 directory successfully created\n2024-06-27 11:25:32,579 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_191/interseqcorr/sandbox_5e5490fe-3d30-4daa-9104-0d52159f2182\n2024-06-27 11:25:32,842 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/interseqcorr/sandbox_5e5490fe-3d30-4daa-9104-0d52159f2182&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/interseqcorr/inter_seqcorr.csv\nChecking if empty file: /tmp/biobb/unitests_191/interseqcorr/inter_seqcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/interseqcorr/inter_seqcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/inter_seqcorr_roll.jpg\n     IMAGE_A HASH: ff8080889080c0ff SIZE: 64 bits\n     IMAGE_B HASH: ff8080889080c0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/interseqcorr/interseqcorr_log.out:file_utils.py:391 Executing biobb_dna.interbp_correlations.interseqcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/interseqcorr/interseqcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_191/interseqcorr/sandbox_5e5490fe-3d30-4daa-9104-0d52159f2182 directory successfully created\nINFO     /tmp/biobb/unitests_191/interseqcorr/interseqcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_191/interseqcorr/sandbox_5e5490fe-3d30-4daa-9104-0d52159f2182\nINFO     /tmp/biobb/unitests_191/interseqcorr/interseqcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/interseqcorr/sandbox_5e5490fe-3d30-4daa-9104-0d52159f2182&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterBasepairCorrelation::test_basepaircorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterBasepairCorrelation::test_basepaircorrelation&#34;, &#34;duration&#34;: &#34;926 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestInterBasepairCorrelation::test_basepaircorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;926 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:32,929 [MainThread  ] [INFO ]  Executing biobb_dna.interbp_correlations.interbpcorr Version: 4.2.4\n2024-06-27 11:25:32,929 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab directory successfully created\n2024-06-27 11:25:32,930 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shift.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\n2024-06-27 11:25:32,931 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_slide.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\n2024-06-27 11:25:32,931 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_rise.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\n2024-06-27 11:25:32,932 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_tilt.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\n2024-06-27 11:25:32,933 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\n2024-06-27 11:25:32,934 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_twist.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\n2024-06-27 11:25:33,760 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/interbpcorr/inter_bpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_191/interbpcorr/inter_bpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/interbpcorr/inter_bpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/inter_bpcorr_ref.jpg\n     IMAGE_A HASH: fd6d6dfffd6c0183 SIZE: 64 bits\n     IMAGE_B HASH: fd6d6dfffd6c0183 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Executing biobb_dna.interbp_correlations.interbpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab directory successfully created\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shift.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_slide.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_rise.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_tilt.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_roll.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_twist.ser to /tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab\nINFO     /tmp/biobb/unitests_191/interbpcorr/interbpcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/interbpcorr/sandbox_316e9fe9-69a8-4f6a-a8b2-0341d0ad58ab&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraHelparCorrelation::test_helparcorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraHelparCorrelation::test_helparcorrelation&#34;, &#34;duration&#34;: &#34;558 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraHelparCorrelation::test_helparcorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;558 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:33,856 [MainThread  ] [INFO ]  Executing biobb_dna.intrabp_correlations.intrahpcorr Version: 4.2.4\n2024-06-27 11:25:33,856 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5 directory successfully created\n2024-06-27 11:25:33,857 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_shear_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\n2024-06-27 11:25:33,857 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stretch_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\n2024-06-27 11:25:33,857 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stagger_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\n2024-06-27 11:25:33,857 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_buckle_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\n2024-06-27 11:25:33,858 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_propel_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\n2024-06-27 11:25:33,858 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_opening_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\n2024-06-27 11:25:34,327 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/intrahpcorr/intra_hpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_191/intrahpcorr/intra_hpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/intrahpcorr/intra_hpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/intra_hpcorr_ref.jpg\n     IMAGE_A HASH: fb81848890a0e0ff SIZE: 64 bits\n     IMAGE_B HASH: fb81848890a0e0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Executing biobb_dna.intrabp_correlations.intrahpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:82 /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5 directory successfully created\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_shear_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stretch_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_stagger_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_buckle_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_propel_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/series_opening_A.csv to /tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5\nINFO     /tmp/biobb/unitests_191/intrahpcorr/log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/intrahpcorr/sandbox_52298039-64fe-45b3-837c-578765db53a5&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_191\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraSequenceCorrelation::test_sequencecorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraSequenceCorrelation::test_sequencecorrelation&#34;, &#34;duration&#34;: &#34;350 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraSequenceCorrelation::test_sequencecorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;350 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:34,415 [MainThread  ] [INFO ]  Executing biobb_dna.intrabp_correlations.intraseqcorr Version: 4.2.4\n2024-06-27 11:25:34,415 [MainThread  ] [INFO ]  /tmp/biobb/unitests_191/intraseqcorr/sandbox_b2f07a18-ac97-4da7-85fb-b03d04e87065 directory successfully created\n2024-06-27 11:25:34,416 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_191/intraseqcorr/sandbox_b2f07a18-ac97-4da7-85fb-b03d04e87065\n2024-06-27 11:25:34,679 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_191/intraseqcorr/sandbox_b2f07a18-ac97-4da7-85fb-b03d04e87065&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_191/intraseqcorr/intra_seqcorr.csv\nChecking if empty file: /tmp/biobb/unitests_191/intraseqcorr/intra_seqcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_191/intraseqcorr/intra_seqcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/intra_seqcorr_buckle.jpg\n     IMAGE_A HASH: ff83848890a0c0ff SIZE: 64 bits\n     IMAGE_B HASH: ff83848890a0c0ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_191/intraseqcorr/intraseqcorr_log.out:file_utils.py:391 Executing biobb_dna.intrabp_correlations.intraseqcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_191/intraseqcorr/intraseqcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_191/intraseqcorr/sandbox_b2f07a18-ac97-4da7-85fb-b03d04e87065 directory successfully created\nINFO     /tmp/biobb/unitests_191/intraseqcorr/intraseqcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_191/intraseqcorr/sandbox_b2f07a18-ac97-4da7-85fb-b03d04e87065\nINFO     /tmp/biobb/unitests_191/intraseqcorr/intraseqcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_191/intraseqcorr/sandbox_b2f07a18-ac97-4da7-85fb-b03d04e87065&amp;#x27;]\n\n&#34;}], &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraBasepairCorrelation::test_basepaircorrelation&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraBasepairCorrelation::test_basepaircorrelation&#34;, &#34;duration&#34;: &#34;00:00:01&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_correlation/test_correlation.py::TestIntraBasepairCorrelation::test_basepaircorrelation&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:01&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:34,768 [MainThread  ] [INFO ]  Executing biobb_dna.intrabp_correlations.intrabpcorr Version: 4.2.4\n2024-06-27 11:25:34,768 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031 directory successfully created\n2024-06-27 11:25:34,769 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shear.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\n2024-06-27 11:25:34,770 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stretch.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\n2024-06-27 11:25:34,771 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stagger.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\n2024-06-27 11:25:34,772 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\n2024-06-27 11:25:34,772 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_propel.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\n2024-06-27 11:25:34,773 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_opening.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\n2024-06-27 11:25:35,708 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/intrabpcorr/intra_bpcorr.csv\nChecking if empty file: /tmp/biobb/unitests_192/intrabpcorr/intra_bpcorr.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_192/intrabpcorr/intra_bpcorr.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/correlation/intra_bpcorr_ref.jpg\n     IMAGE_A HASH: 01f5f7f7fcf40183 SIZE: 64 bits\n     IMAGE_B HASH: 01f5f7f7fcf40183 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Executing biobb_dna.intrabp_correlations.intrabpcorr Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:82 /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031 directory successfully created\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_shear.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stretch.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_stagger.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_buckle.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_propel.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/correlation/canal_output_opening.ser to /tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031\nINFO     /tmp/biobb/unitests_192/intrabpcorr/intrabpcorr_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/intrabpcorr/sandbox_8399e05c-e9de-4dd2-b510-647e31b6b031&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_canal.py::TestCanal::test_canal&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_canal.py::TestCanal::test_canal&#34;, &#34;duration&#34;: &#34;00:00:07&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_canal.py::TestCanal::test_canal&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:07&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:35,807 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.biobb_canal Version: 4.2.4\n2024-06-27 11:25:35,807 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/biobb_canal/sandbox_102eb74f-ab90-4ca1-85dd-008e7d32bca9 directory successfully created\n2024-06-27 11:25:35,820 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/curves_output.cda to /tmp/biobb/unitests_192/biobb_canal/sandbox_102eb74f-ab90-4ca1-85dd-008e7d32bca9\n2024-06-27 11:25:35,820 [MainThread  ] [INFO ]  Creating command line with instructions and required arguments\n2024-06-27 11:25:35,820 [MainThread  ] [INFO ]  Canal &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canal_output,\n  cormin=0.6,\n  lev1=0,lev2=0,\n  itst=0,itnd=0,itdel=1,\n  histo=.t.,\n  series=.t.,\n  corr=.t.,\n&amp;amp;end\ncurves_output.cda CGCGAATTCGCG\n!\n\n2024-06-27 11:25:43,003 [MainThread  ] [INFO ]  Exit code 0\n\n2024-06-27 11:25:43,153 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/biobb_canal/sandbox_102eb74f-ab90-4ca1-85dd-008e7d32bca9&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/biobb_canal/canal_output.zip\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.biobb_canal Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:file_utils.py:82 /tmp/biobb/unitests_192/biobb_canal/sandbox_102eb74f-ab90-4ca1-85dd-008e7d32bca9 directory successfully created\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/curves_output.cda to /tmp/biobb/unitests_192/biobb_canal/sandbox_102eb74f-ab90-4ca1-85dd-008e7d32bca9\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:file_utils.py:391 Creating command line with instructions and required arguments\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:cmd_wrapper.py:33 Canal &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canal_output,\n  cormin=0.6,\n  lev1=0,lev2=0,\n  itst=0,itnd=0,itdel=1,\n  histo=.t.,\n  series=.t.,\n  corr=.t.,\n&amp;amp;end\ncurves_output.cda CGCGAATTCGCG\n!\n\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:cmd_wrapper.py:50 Exit code 0\n\nINFO     /tmp/biobb/unitests_192/biobb_canal/biobb_canal_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/biobb_canal/sandbox_102eb74f-ab90-4ca1-85dd-008e7d32bca9&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_canal_unzip.py::TestCanalUnzip::test_canal_unzip&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_canal_unzip.py::TestCanalUnzip::test_canal_unzip&#34;, &#34;duration&#34;: &#34;88 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_canal_unzip.py::TestCanalUnzip::test_canal_unzip&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;88 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:43,205 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.canal_unzip Version: 4.2.4\n2024-06-27 11:25:43,205 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20 directory successfully created\n2024-06-27 11:25:43,238 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/canal_output.zip to /tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20\n2024-06-27 11:25:43,241 [MainThread  ] [INFO ]  canal_output_alphaC.his exists, copying into /tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20/canal_unzip_output.ser.\n2024-06-27 11:25:43,246 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/canal_unzip/canal_unzip_output.ser\nChecking if empty file: /tmp/biobb/unitests_192/canal_unzip/canal_unzip_output.txt\nComparing: \n        File_A: /tmp/biobb/unitests_192/canal_unzip/canal_unzip_output.ser\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/canal_unzip_output.ser\n        File_A hash: b&amp;#x27;\\r\\x84{\\xb8:rpBW\\xb4M\\x86\\xfd8I\\xfe\\xd3i\\x19CV_\\xd7\\x91\\xa5\\xf4\\xf4 \\xa6\\xed\\xc1\\xec&amp;#x27;\n        File_B hash: b&amp;#x27;\\r\\x84{\\xb8:rpBW\\xb4M\\x86\\xfd8I\\xfe\\xd3i\\x19CV_\\xd7\\x91\\xa5\\xf4\\xf4 \\xa6\\xed\\xc1\\xec&amp;#x27;\nComparing: \n        File_A: /tmp/biobb/unitests_192/canal_unzip/canal_unzip_output.txt\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/canal_unzip_output.txt\n        File_A hash: b&amp;#x27;\\x00&amp;gt;\\x1f\\x86\\x87\\xae]^K\\t\\xa5\\x9a3\\x17\\xf1\\x91P\\x97O\\x04q\\xd6\\xd3d\\n\\xec4j\\x1d\\x1a\\x82\\xa5&amp;#x27;\n        File_B hash: b&amp;#x27;\\x00&amp;gt;\\x1f\\x86\\x87\\xae]^K\\t\\xa5\\x9a3\\x17\\xf1\\x91P\\x97O\\x04q\\xd6\\xd3d\\n\\xec4j\\x1d\\x1a\\x82\\xa5&amp;#x27;\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/canal_unzip/canal_unzip_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.canal_unzip Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/canal_unzip/canal_unzip_log.out:file_utils.py:82 /tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20 directory successfully created\nINFO     /tmp/biobb/unitests_192/canal_unzip/canal_unzip_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/canal_output.zip to /tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20\nINFO     /tmp/biobb/unitests_192/canal_unzip/canal_unzip_log.out:file_utils.py:391 canal_output_alphaC.his exists, copying into /tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20/canal_unzip_output.ser.\nINFO     /tmp/biobb/unitests_192/canal_unzip/canal_unzip_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/canal_unzip/sandbox_fd3820a7-cb4b-4763-972f-4e0c6b17bc20&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_canion.py::TestCanal::test_canion&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_canion.py::TestCanal::test_canion&#34;, &#34;duration&#34;: &#34;389 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_canion.py::TestCanal::test_canion&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;389 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:43,293 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.biobb_canion Version: 4.2.4\n2024-06-27 11:25:43,293 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc directory successfully created\n2024-06-27 11:25:43,588 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_K.cdi to /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc\n2024-06-27 11:25:43,588 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA.afr to /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc\n2024-06-27 11:25:43,589 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_avg.pdb to /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc\n2024-06-27 11:25:43,589 [MainThread  ] [INFO ]  Creating command line with instructions and required arguments\n2024-06-27 11:25:43,589 [MainThread  ] [INFO ]  Canion &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canion_output,\n  dat=THGA_K,\n  axfrm=THGA,\n  solute=THGA_avg,\n  type=K+,\n  dlow=5.8,\n  dhig=7.2,\n  rlow=0,\n  rhig=18,\n  alow=0,\n  ahig=360,\n  itst=0,\n  itnd=0,\n  itdel=1,\n  rmsf=.f.,\n  circ=.f.,\n&amp;amp;end\n!\n\n2024-06-27 11:25:43,594 [MainThread  ] [INFO ]  Exit code 0\n\n2024-06-27 11:25:43,637 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/biobb_canion/canion_output.zip\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.biobb_canion Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:82 /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc directory successfully created\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_K.cdi to /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA.afr to /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/THGA_avg.pdb to /tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:391 Creating command line with instructions and required arguments\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:cmd_wrapper.py:33 Canion &amp;lt;&amp;lt;! \n&amp;amp;inp\n  lis=canion_output,\n  dat=THGA_K,\n  axfrm=THGA,\n  solute=THGA_avg,\n  type=K+,\n  dlow=5.8,\n  dhig=7.2,\n  rlow=0,\n  rhig=18,\n  alow=0,\n  ahig=360,\n  itst=0,\n  itnd=0,\n  itdel=1,\n  rmsf=.f.,\n  circ=.f.,\n&amp;amp;end\n!\n\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:cmd_wrapper.py:50 Exit code 0\n\nINFO     /tmp/biobb/unitests_192/biobb_canion/biobb_canion_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/biobb_canion/sandbox_cae2c828-538e-4b56-8c8f-9c0ea8579bcc&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_curvesplus/test_curves.py::TestCurves::test_curves&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_curvesplus/test_curves.py::TestCurves::test_curves&#34;, &#34;duration&#34;: &#34;00:00:07&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_curvesplus/test_curves.py::TestCurves::test_curves&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:07&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:43,685 [MainThread  ] [INFO ]  Executing biobb_dna.curvesplus.biobb_curves Version: 4.2.4\n2024-06-27 11:25:43,686 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5 directory successfully created\n2024-06-27 11:25:43,754 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.trj to /tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5\n2024-06-27 11:25:43,755 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.top to /tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5\n2024-06-27 11:25:43,756 [MainThread  ] [INFO ]  Appending provided topology to command\n2024-06-27 11:25:43,756 [MainThread  ] [INFO ]  Creating command line with instructions and required arguments\n2024-06-27 11:25:43,756 [MainThread  ] [INFO ]  Cur+ &amp;lt;&amp;lt;! \n&amp;amp;inp\n  file=structure.stripped.trj,\n  ftop=structure.stripped.top,\n  lis=&amp;#x27;curves_output&amp;#x27;,\n  lib=.curvesplus/standard,\n  ions=.t.,\n  test=.f.,\n  line=.f.,\n  fit=.t.,\n  axfrm=.f.,\n  itst=0,itnd=0,itdel=1,\n&amp;amp;end\n2 1 -1 0 0\n1:12\n24:13\n!\n\n2024-06-27 11:25:50,689 [MainThread  ] [INFO ]  Exit code 0\n\n2024-06-27 11:25:50,732 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/biobb_curves/curves_output.cda\nChecking if empty file: /tmp/biobb/unitests_192/biobb_curves/curves_output.lis\nChecking if empty file: /tmp/biobb/unitests_192/biobb_curves/curves_output.zip\nComparing ignoring lines containing this words: [2]\n     FILE_A: /tmp/biobb/unitests_192/biobb_curves/curves_output.lis\n     FILE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/curves_trj_output.lis\nThis is a ZIP comparison!\nUnzipping:\nCreating a unique_dir for: /tmp/biobb/unitests_192/biobb_curves/curves_output.zip\nCreating a unique_dir for: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/curvesplus/curves_trj_output.zip\nComparing: \n        File_A: 8d77037d-fb7d-44f7-8de6-cd39deeecba1/curves_output.cdi\n        File_B: f475ce3f-7fe3-4ca5-92b2-ea2a16c2035c/curves_output.cdi\n        File_A hash: b&amp;#x27;\\xbf\\x13\\x93\\xa0\\xc8\\xba\\x96\\xaa\\xd5sy\\xda\\x0f\\xe1m|\\xab\\xd4\\x9c z\\x9a\\x9d\\xde\\x07\\x7f\\xe3\\x1c\\x0cf_h&amp;#x27;\n        File_B hash: b&amp;#x27;\\xbf\\x13\\x93\\xa0\\xc8\\xba\\x96\\xaa\\xd5sy\\xda\\x0f\\xe1m|\\xab\\xd4\\x9c z\\x9a\\x9d\\xde\\x07\\x7f\\xe3\\x1c\\x0cf_h&amp;#x27;\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:391 Executing biobb_dna.curvesplus.biobb_curves Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:82 /tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5 directory successfully created\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.trj to /tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/curvesplus/structure.stripped.top to /tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:391 Appending provided topology to command\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:391 Creating command line with instructions and required arguments\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:cmd_wrapper.py:33 Cur+ &amp;lt;&amp;lt;! \n&amp;amp;inp\n  file=structure.stripped.trj,\n  ftop=structure.stripped.top,\n  lis=&amp;#x27;curves_output&amp;#x27;,\n  lib=.curvesplus/standard,\n  ions=.t.,\n  test=.f.,\n  line=.f.,\n  fit=.t.,\n  axfrm=.f.,\n  itst=0,itnd=0,itdel=1,\n&amp;amp;end\n2 1 -1 0 0\n1:12\n24:13\n!\n\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:cmd_wrapper.py:50 Exit code 0\n\nINFO     /tmp/biobb/unitests_192/biobb_curves/biobb_curves_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/biobb_curves/sandbox_e8ee0340-5a82-4368-9ca8-31b37e0c4cc5&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_averages.py::TestAverages::test_helparaverages&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_averages.py::TestAverages::test_helparaverages&#34;, &#34;duration&#34;: &#34;238 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_averages.py::TestAverages::test_helparaverages&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;238 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:50,834 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_averages Version: 4.2.4\n2024-06-27 11:25:50,834 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/dna_averages/sandbox_3ff0f268-66ca-482c-a5dc-483709ff97d7 directory successfully created\n2024-06-27 11:25:50,835 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_192/dna_averages/sandbox_3ff0f268-66ca-482c-a5dc-483709ff97d7\n2024-06-27 11:25:50,991 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_averages/sandbox_3ff0f268-66ca-482c-a5dc-483709ff97d7&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/dna_averages/avg_out.csv\nChecking if empty file: /tmp/biobb/unitests_192/dna_averages/avg_out.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_192/dna_averages/avg_out.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/shift_avg.jpg\n     IMAGE_A HASH: c07e3e32163f3ee3 SIZE: 64 bits\n     IMAGE_B HASH: c07e3e32163f3ee3 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/dna_averages/dna_averages_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_averages Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/dna_averages/dna_averages_log.out:file_utils.py:82 /tmp/biobb/unitests_192/dna_averages/sandbox_3ff0f268-66ca-482c-a5dc-483709ff97d7 directory successfully created\nINFO     /tmp/biobb/unitests_192/dna_averages/dna_averages_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_192/dna_averages/sandbox_3ff0f268-66ca-482c-a5dc-483709ff97d7\nINFO     /tmp/biobb/unitests_192/dna_averages/dna_averages_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_averages/sandbox_3ff0f268-66ca-482c-a5dc-483709ff97d7&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_bimodality.py::TestBimodality::test_helparbimodality&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_bimodality.py::TestBimodality::test_helparbimodality&#34;, &#34;duration&#34;: &#34;444 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_bimodality.py::TestBimodality::test_helparbimodality&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;444 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:51,078 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_bimodality Version: 4.2.4\n2024-06-27 11:25:51,078 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/dna_bimodality/sandbox_42109d34-b339-4f76-9ce9-040001eb9bf7 directory successfully created\n2024-06-27 11:25:51,078 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/series_shift_AT.csv to /tmp/biobb/unitests_192/dna_bimodality/sandbox_42109d34-b339-4f76-9ce9-040001eb9bf7\n2024-06-27 11:25:51,473 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_bimodality/sandbox_42109d34-b339-4f76-9ce9-040001eb9bf7&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/dna_bimodality/bimod_out.csv\nChecking if empty file: /tmp/biobb/unitests_192/dna_bimodality/bimod_out.jpg\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/dna_bimodality/dna_bimodality_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_bimodality Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/dna_bimodality/dna_bimodality_log.out:file_utils.py:82 /tmp/biobb/unitests_192/dna_bimodality/sandbox_42109d34-b339-4f76-9ce9-040001eb9bf7 directory successfully created\nINFO     /tmp/biobb/unitests_192/dna_bimodality/dna_bimodality_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/series_shift_AT.csv to /tmp/biobb/unitests_192/dna_bimodality/sandbox_42109d34-b339-4f76-9ce9-040001eb9bf7\nINFO     /tmp/biobb/unitests_192/dna_bimodality/dna_bimodality_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_bimodality/sandbox_42109d34-b339-4f76-9ce9-040001eb9bf7&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_timeseries.py::TestTimeSeries::test_helpartimeseries&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_timeseries.py::TestTimeSeries::test_helpartimeseries&#34;, &#34;duration&#34;: &#34;00:00:05&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_timeseries.py::TestTimeSeries::test_helpartimeseries&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;00:00:05&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:51,522 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_timeseries Version: 4.2.4\n2024-06-27 11:25:51,522 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/dna_timeseries/sandbox_8d5bb0bb-514d-4856-9ac6-572c226b6252 directory successfully created\n2024-06-27 11:25:51,523 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_192/dna_timeseries/sandbox_8d5bb0bb-514d-4856-9ac6-572c226b6252\n2024-06-27 11:25:56,191 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_timeseries/sandbox_8d5bb0bb-514d-4856-9ac6-572c226b6252&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/dna_timeseries/timeseries_output.zip\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/dna_timeseries/dna_timeseries_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_timeseries Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/dna_timeseries/dna_timeseries_log.out:file_utils.py:82 /tmp/biobb/unitests_192/dna_timeseries/sandbox_8d5bb0bb-514d-4856-9ac6-572c226b6252 directory successfully created\nINFO     /tmp/biobb/unitests_192/dna_timeseries/dna_timeseries_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/canal_output_shift.ser to /tmp/biobb/unitests_192/dna_timeseries/sandbox_8d5bb0bb-514d-4856-9ac6-572c226b6252\nINFO     /tmp/biobb/unitests_192/dna_timeseries/dna_timeseries_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_timeseries/sandbox_8d5bb0bb-514d-4856-9ac6-572c226b6252&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_dna/test_timeseries_unzip.py::TestCanalUnzip::test_dna_timeseries_unzip&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_dna/test_timeseries_unzip.py::TestCanalUnzip::test_dna_timeseries_unzip&#34;, &#34;duration&#34;: &#34;82 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_dna/test_timeseries_unzip.py::TestCanalUnzip::test_dna_timeseries_unzip&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;82 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:56,238 [MainThread  ] [INFO ]  Executing biobb_dna.dna.dna_timeseries_unzip Version: 4.2.4\n2024-06-27 11:25:56,239 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7 directory successfully created\n2024-06-27 11:25:56,240 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/timeseries_output.zip to /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7\n2024-06-27 11:25:56,240 [MainThread  ] [INFO ]  hist_shift_6_AT.csv exists, copying into /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7/dna_timeseries_unzip.csv.\n2024-06-27 11:25:56,241 [MainThread  ] [INFO ]  hist_shift_6_AT.jpg exists, copying into /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7/dna_timeseries_unzip.jpg.\n2024-06-27 11:25:56,242 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip.csv\nChecking if empty file: /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip.jpg\nChecking if empty file: /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip.txt\nComparing: \n        File_A: /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip.csv\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/dna_timeseries_unzip.csv\n        File_A hash: b&amp;#x27;\\xa2W\\xf05tAU\\xa7\\x93\\xe2\\x12L\\xddq\\x86\\xcdN\\xf8\\xd6\\xf6\\x0cO\\x0bJu\\xa8\\tRO\\xc0lH&amp;#x27;\n        File_B hash: b&amp;#x27;\\xa2W\\xf05tAU\\xa7\\x93\\xe2\\x12L\\xddq\\x86\\xcdN\\xf8\\xd6\\xf6\\x0cO\\x0bJu\\xa8\\tRO\\xc0lH&amp;#x27;\nComparing: \n        File_A: /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip.txt\n        File_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/dna_timeseries_unzip.txt\n        File_A hash: b&amp;#x27;O\\xeeQ\\xcb\\xd3T\\xf3\\x9e\\xbc\\xa6\\xcb\\xd8\\xb6F\\x12r\\x12\\xb4I.\\xf9\\xa6/e}\\x85\\xf9\\x18\\x06\\xe18\\xd4&amp;#x27;\n        File_B hash: b&amp;#x27;O\\xeeQ\\xcb\\xd3T\\xf3\\x9e\\xbc\\xa6\\xcb\\xd8\\xb6F\\x12r\\x12\\xb4I.\\xf9\\xa6/e}\\x85\\xf9\\x18\\x06\\xe18\\xd4&amp;#x27;\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/dna/dna_timeseries_unzip.jpg\n     IMAGE_A HASH: ffe7e7e7e7e3c3ff SIZE: 64 bits\n     IMAGE_B HASH: ffe7e7e7e7e3c3ff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 Executing biobb_dna.dna.dna_timeseries_unzip Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:82 /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7 directory successfully created\nINFO     /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/dna/timeseries_output.zip to /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7\nINFO     /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 hist_shift_6_AT.csv exists, copying into /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7/dna_timeseries_unzip.csv.\nINFO     /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 hist_shift_6_AT.jpg exists, copying into /tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7/dna_timeseries_unzip.jpg.\nINFO     /tmp/biobb/unitests_192/dna_timeseries_unzip/dna_timeseries_unzip_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/dna_timeseries_unzip/sandbox_60b47dd2-3a03-43ac-aec0-0b09daa306c7&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestAvgStiffness::test_averagestiffness&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestAvgStiffness::test_averagestiffness&#34;, &#34;duration&#34;: &#34;249 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestAvgStiffness::test_averagestiffness&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;249 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:56,322 [MainThread  ] [INFO ]  Executing biobb_dna.stiffness.average_stiffness Version: 4.2.4\n2024-06-27 11:25:56,322 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/average_stiffness/sandbox_b8ed9eaf-106d-4774-be4f-01019ea97657 directory successfully created\n2024-06-27 11:25:56,323 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/canal_output_roll.ser to /tmp/biobb/unitests_192/average_stiffness/sandbox_b8ed9eaf-106d-4774-be4f-01019ea97657\n2024-06-27 11:25:56,490 [MainThread  ] [INFO ]  Removed: [&amp;#x27;/tmp/biobb/unitests_192/average_stiffness/sandbox_b8ed9eaf-106d-4774-be4f-01019ea97657&amp;#x27;]\nChecking if empty file: /tmp/biobb/unitests_192/average_stiffness/avgstiff.csv\nChecking if empty file: /tmp/biobb/unitests_192/average_stiffness/avgstiff.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_192/average_stiffness/avgstiff.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/stiffness/stiffavg_roll.jpg\n     IMAGE_A HASH: 017f7f7f1d7f7e80 SIZE: 64 bits\n     IMAGE_B HASH: 017f7f7f1d7f7e80 SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/average_stiffness/average_stiffness_log.out:file_utils.py:391 Executing biobb_dna.stiffness.average_stiffness Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/average_stiffness/average_stiffness_log.out:file_utils.py:82 /tmp/biobb/unitests_192/average_stiffness/sandbox_b8ed9eaf-106d-4774-be4f-01019ea97657 directory successfully created\nINFO     /tmp/biobb/unitests_192/average_stiffness/average_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/canal_output_roll.ser to /tmp/biobb/unitests_192/average_stiffness/sandbox_b8ed9eaf-106d-4774-be4f-01019ea97657\nINFO     /tmp/biobb/unitests_192/average_stiffness/average_stiffness_log.out:file_utils.py:391 Removed: [&amp;#x27;/tmp/biobb/unitests_192/average_stiffness/sandbox_b8ed9eaf-106d-4774-be4f-01019ea97657&amp;#x27;]\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}], &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestBasePairStiffness::test_basepairstiffness&#34;: [{&#34;extras&#34;: [], &#34;result&#34;: &#34;Passed&#34;, &#34;testId&#34;: &#34;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestBasePairStiffness::test_basepairstiffness&#34;, &#34;duration&#34;: &#34;257 ms&#34;, &#34;resultsTableRow&#34;: [&#34;&lt;td class=\&#34;col-result\&#34;&gt;Passed&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-testId\&#34;&gt;biobb_dna/test/unitests/test_stiffness/test_stiffness.py::TestBasePairStiffness::test_basepairstiffness&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-duration\&#34;&gt;257 ms&lt;/td&gt;&#34;, &#34;&lt;td class=\&#34;col-links\&#34;&gt;&lt;/td&gt;&#34;], &#34;log&#34;: &#34;----------------------------- Captured stdout call -----------------------------\n2024-06-27 11:25:56,572 [MainThread  ] [INFO ]  Executing biobb_dna.stiffness.basepair_stiffness Version: 4.2.4\n2024-06-27 11:25:56,572 [MainThread  ] [INFO ]  /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc directory successfully created\n2024-06-27 11:25:56,573 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\n2024-06-27 11:25:56,573 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\n2024-06-27 11:25:56,573 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\n2024-06-27 11:25:56,573 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\n2024-06-27 11:25:56,574 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\n2024-06-27 11:25:56,574 [MainThread  ] [INFO ]  Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\nChecking if empty file: /tmp/biobb/unitests_192/basepair_stiffness/bpstiff.csv\nChecking if empty file: /tmp/biobb/unitests_192/basepair_stiffness/bpstiff.jpg\nComparing images of both files:\n     IMAGE_A: /tmp/biobb/unitests_192/basepair_stiffness/bpstiff.jpg\n     IMAGE_B: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/reference/stiffness/stiffbp_ref.jpg\n     IMAGE_A HASH: ff8080909080ffff SIZE: 64 bits\n     IMAGE_B HASH: ff8080909080ffff SIZE: 64 bits\n     TOLERANCE: 1.0%, ABS TOLERANCE: 1 bits, DIFFERENCE: 0 bits\n\n------------------------------ Captured log call -------------------------------\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Executing biobb_dna.stiffness.basepair_stiffness Version: 4.2.4\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:82 /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc directory successfully created\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_shift_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_slide_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_rise_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_tilt_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_roll_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\nINFO     /tmp/biobb/unitests_192/basepair_stiffness/basepair_stiffness_log.out:file_utils.py:391 Copy: /home/user/actions-runner/_work/biobb_dna/biobb_dna/biobb_dna/test/data/stiffness/series_twist_AA.csv to /tmp/biobb/unitests_192/basepair_stiffness/sandbox_4ac65f16-9712-448f-b94e-6a4cca22b0cc\n\n--------------------------- Captured stdout teardown ---------------------------\n\nRemoving: /tmp/biobb/unitests_192\n&#34;}]}, &#34;renderCollapsed&#34;: [&#34;passed&#34;], &#34;initialSort&#34;: &#34;result&#34;, &#34;title&#34;: &#34;report.html&#34;}"></div>
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 const { getCollapsedCategory, setCollapsedIds } = require('./storage.js')