diff --git a/docs/guides/user_guide.md b/docs/guides/user_guide.md index d5246664..26024152 100644 --- a/docs/guides/user_guide.md +++ b/docs/guides/user_guide.md @@ -46,7 +46,19 @@ The configuration fields should be self-explanatory. ### Ilastik -TBD +In version 1.4.0, ilastik introduced the [Neural Network workflow](https://www.ilastik.org/documentation/nn/nn), which allows you to easily load models from the BioImage Model Zoo and run them on your images. + +A [video tutorial](https://www.youtube.com/watch?v=PfXCKNhsOLw) demonstrating the workflow and how to load models is available on the ilastik team's [YouTube channel](https://www.youtube.com/@ilastikTeam). + +The simplest steps to try it out are, in short: + +1. Download and install the [newest ilastik version](https://www.ilastik.org/download) +2. Create a "Neural Network Classification (Local)" project +3. Select your input image(s) +4. Choose a suitable model from the BioImage Model Zoo, copy the model nickname +5. Paste the model nickname into ilastik +6. Run Live Prediction to preview the model's output on the currently displayed data +7. Export predictions for the full image ### ImJoy TBD