-
Notifications
You must be signed in to change notification settings - Fork 17
108 lines (102 loc) · 2.95 KB
/
build.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
name: Test and Deploy bioimageio.spec
on:
push:
branches: [ main ]
pull_request:
branches: [ "**" ]
jobs:
black:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Check files using the black formatter
uses: rickstaa/action-black@v1
id: action_black
with:
black_args: "."
- name: Annotate diff changes using reviewdog
if: steps.action_black.outputs.is_formatted == 'true'
uses: reviewdog/action-suggester@v1
with:
tool_name: blackfmt
test:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
cache: 'pip'
- name: Install dependencies
run: |
pip install --upgrade pip
pip install -e .[dev]
- name: Check autogenerated imports
run: python scripts/generate_version_submodule_imports.py check
- run: pyright
- name: Get Date
id: get-date
run: |
echo "week=$(/bin/date -u "+%Y-%U")" >> $GITHUB_OUTPUT
shell: bash
- uses: actions/cache@v3
with:
path: tests/cache
key: ${{ runner.os }}-${{ matrix.python-version }}-${{ steps.get-date.outputs.week }}-${{ hashFiles('**/lockfiles') }}
- name: Run tests
run: |
pytest
conda-build:
runs-on: ubuntu-latest
needs: test
steps:
- name: checkout
uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Install Conda environment with Micromamba
uses: mamba-org/setup-micromamba@v1
with:
cache-downloads: true
cache-environment: true
environment-name: build-env
condarc: |
channels:
- conda-forge
create-args: >-
boa
- name: linux conda build
shell: bash -l {0}
run: |
conda mambabuild -c conda-forge conda-recipe
deploy:
runs-on: ubuntu-latest
needs: test
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.9
uses: actions/setup-python@v4
with:
python-version: 3.9
- name: Install dependencies
run: |
pip install .
- name: Generate spec docs
run: python scripts/generate_spec_documentation.py
- name: Generate JSON schemas
run: python scripts/generate_json_schemas.py
- name: Get branch name to deploy to
id: get_branch
shell: bash
run: |
if [[ -n '${{ github.event.pull_request.head.ref }}' ]]; then branch=gh-pages-${{ github.event.pull_request.head.ref }}; else branch=gh-pages; fi
echo "::set-output name=branch::$branch"
- name: Deploy to ${{ steps.get_branch.outputs.branch }} 🚀
uses: JamesIves/github-pages-deploy-action@v4
with:
branch: ${{ steps.get_branch.outputs.branch }}
folder: dist