Annotated_uORFs_and_alt.CDS.starts_v4.8.bed

track name="alt_ORFs_v4.8" description="alt_ORFs_v4.8" useScore=1 colorByStrand="0,0,0 0,0,255"
chr1   2019366   2030282 GABRD|NM_000815.5|CDS_extension|CTG 0 +   2019366   2019366 0,0,0  9 125,113,68,221,83,138,156,212,300, 0,5575,5967,6151,8210,8788,9744,10184,10616,
chr1   2228061   2228106 SKI|NM_003036.4|non-overlapping|ATG 0 +   2228061   2228061 0,0,0  1 45, 0,
chr1   3069194   3069290 PRDM16|NM_022114.4|overlapping|ATG 0 +   3069194   3069194 0,0,0  1 96, 0,
chr1   6424859   6424925 ESPN|NM_031475.3|non-overlapping|ACG 0 +   6424859   6424859 0,0,0  1 66, 0,
chr1   6424901   6424925 ESPN|NM_031475.3|non-overlapping|ATG 0 +   6424901   6424901 0,0,0  1 24, 0,
chr1   6785462   6820247 CAMTA1|NM_015215.4|overlapping|GTG 0 +   6785462   6785462 0,0,0  2 113,67, 0,34718,
chr1   7784693   7784723 PER3|NM_016831.4|non-overlapping|ATG 0 +   7784693   7784693 0,0,0  1 30, 0,
chr1   9651782   9691470 PIK3CD|NM_005026.5|non-overlapping|CTG 0 +   9651782   9651782 0,0,0  2 20,4, 0,39684,
chr1   9651789   9710446 PIK3CD|NM_005026.5|non-overlapping|CTG 0 +   9651789   9651789 0,0,0  3 13,105,23, 0,39677,58634,
chr1   9691489   9710446 PIK3CD|NM_005026.5|non-overlapping|ATG 0 +   9691489   9691489 0,0,0  2 82,23, 0,18934,
chr1  10210739  10210844 KIF1B|NM_015074.3|non-overlapping|ATG 0 +  10210739  10210739 0,0,0  1 105, 0,
chr1  11012672  11013749 TARDBP|NM_007375.4|overlapping|GTG 0 +  11012672  11012672 0,0,0  2 71,34, 0,1043,
chr1  11273232  11273253 UBIAD1|NM_013319.3|non-overlapping|ATG 0 +  11273232  11273232 0,0,0  1 21, 0,
chr1  11273241  11273253 UBIAD1|NM_013319.3|non-overlapping|CTG 0 +  11273241  11273241 0,0,0  1 12, 0,
chr1  11273414  11273504 UBIAD1|NM_013319.3|non-overlapping|CTG 0 +  11273414  11273414 0,0,0  1 90, 0,
chr1  11980455  11980482 MFN2|NM_014874.4|non-overlapping|ATG 0 +  11980455  11980455 0,0,0  1 27, 0,
chr1  11982015  11982078 MFN2|NM_014874.4|non-overlapping|CTG 0 +  11982015  11982015 0,0,0  1 63, 0,
chr1  11982068  11982092 MFN2|NM_014874.4|non-overlapping|ATG 0 +  11982068  11982068 0,0,0  1 24, 0,
chr1  11982077  11982092 MFN2|NM_014874.4|non-overlapping|ATG 0 +  11982077  11982077 0,0,0  1 15, 0,
chr1  22052711  22052741 CDC42|NM_001791.4|non-overlapping|GTG 0 +  22052711  22052711 0,0,0  1 30, 0,
chr1  23019483  23019513 KDM1A|NM_001009999.3|non-overlapping|ACG 0 +  23019483  23019483 0,0,0  1 30, 0,
chr1  26432899  26432932 DHDDS|NM_024887.4|non-overlapping|CTG 0 +  26432899  26432899 0,0,0  1 33, 0,
chr1  26432915  26432924 DHDDS|NM_024887.4|non-overlapping|CTG 0 +  26432915  26432915 0,0,0  1 9, 0,
chr1  26695718  26695748 ARID1A|NM_006015.6|non-overlapping|ATG 0 +  26695718  26695718 0,0,0  1 30, 0,
chr1  26696117  26696231 ARID1A|NM_006015.6|non-overlapping|ATG 0 +  26696117  26696117 0,0,0  1 114, 0,
chr1  26696162  26696231 ARID1A|NM_006015.6|non-overlapping|CTG 0 +  26696162  26696162 0,0,0  1 69, 0,
chr1  26696227  26696476 ARID1A|NM_006015.6|overlapping|CTG 0 +  26696227  26696227 0,0,0  1 249, 0,
chr1  28887086  28887149 EPB41|NM_001166005.2|non-overlapping|ATG 0 +  28887086  28887086 0,0,0  1 63, 0,
chr1  28887131  28887149 EPB41|NM_004437.4|non-overlapping|GTG 0 +  28887131  28887131 0,0,0  1 18, 0,
chr1  28987606  28987636 EPB41|NM_004437.4|non-overlapping|ATG 0 +  28987606  28987606 0,0,0  1 30, 0,
chr1  34781229  34781463 GJB3|NM_024009.3|non-overlapping|CTG 0 +  34781229  34781229 0,0,0  1 234, 0,
chr1  34781395  34781416 GJB3|NM_024009.3|non-overlapping|ACG 0 +  34781395  34781395 0,0,0  1 21, 0,
chr1  34781474  34781552 GJB3|NM_024009.3|non-overlapping|GTG 0 +  34781474  34781474 0,0,0  1 78, 0,
chr1  34781521  34781626 GJB3|NM_024009.3|non-overlapping|ATG 0 +  34781521  34781521 0,0,0  1 105, 0,
chr1  40783832  40784027 KCNQ4|NM_004700.4|non-overlapping|ATG 0 +  40783832  40783832 0,0,0  1 195, 0,
chr1  40784015  40784027 KCNQ4|NM_004700.4|non-overlapping|ATG 0 +  40784015  40784015 0,0,0  1 12, 0,
chr1  45012232  45012241 UROD|NM_000374.5|non-overlapping|GTG 0 +  45012232  45012232 0,0,0  1 9, 0,
chr1  46247823  46247910 RAD54L|NM_003579.4|non-overlapping|CTG 0 +  46247823  46247823 0,0,0  1 87, 0,
chr1  46247864  46248281 RAD54L|NM_003579.4|non-overlapping|CTG 0 +  46247864  46247864 0,0,0  1 417, 0,
chr1  46247885  46248281 RAD54L|NM_003579.4|non-overlapping|GTG 0 +  46247885  46247885 0,0,0  1 396, 0,
chr1  46247918  46248281 RAD54L|NM_003579.4|non-overlapping|CTG 0 +  46247918  46247918 0,0,0  1 363, 0,
chr1  46248008  46248281 RAD54L|NM_003579.4|non-overlapping|CTG 0 +  46248008  46248008 0,0,0  1 273, 0,
chr1  46248078  46248150 RAD54L|NM_003579.4|non-overlapping|CTG 0 +  46248078  46248078 0,0,0  1 72, 0,
chr1  46248221  46248281 RAD54L|NM_003579.4|non-overlapping|TTG 0 +  46248221  46248221 0,0,0  1 60, 0,
chr1  46248245  46248281 RAD54L|NM_003579.4|non-overlapping|ATG 0 +  46248245  46248245 0,0,0  1 36, 0,
chr1  53196829  53196847 CPT2|NM_000098.3|non-overlapping|GTG 0 +  53196829  53196829 0,0,0  1 18, 0,
chr1  53196843  53196867 CPT2|NM_000098.3|non-overlapping|CTG 0 +  53196843  53196843 0,0,0  1 24, 0,
chr1  53196881  53200783 CPT2|NM_000098.3|overlapping|TTG 0 +  53196881  53196881 0,0,0  2 214,65, 0,3837,
chr1  53196908  53200783 CPT2|NM_000098.3|overlapping|TTG 0 +  53196908  53196908 0,0,0  2 187,65, 0,3810,
chr1  61082578  61082593 NFIA|NM_005595.5|non-overlapping|ATG 0 +  61082578  61082578 0,0,0  1 15, 0,
chr1  61082629  61082635 NFIA|NM_005595.5|non-overlapping|ATG 0 +  61082629  61082629 0,0,0  1 6, 0,
chr1  61082501  61082537 NFIA|NM_005595.5|non-overlapping|ATG 0 +  61082501  61082537 0,0,0  1 36, 0,
chr1  77888577  77888661 NEXN|NM_144573.4|non-overlapping|ATG 0 +  77888577  77888577 0,0,0  1 84, 0,
chr1  77888654  77916099 NEXN|NM_144573.4|non-overlapping|GTG 0 +  77888654  77888654 0,0,0  2 105,45, 0,27400,
chr1  77888717  77916099 NEXN|NM_144573.4|non-overlapping|ACG 0 +  77888717  77888717 0,0,0  2 42,45, 0,27337,
chr1  92832062  92833399 RPL5|NM_000969.5|overlapping|CTG 0 +  92832062  92832062 0,0,0  2 55,11, 0,1326,
chr1 109548645 109548687 GNAI3|NM_006496.4|non-overlapping|GTG 0 + 109548645 109548645 0,0,0  1 42, 0,
chr1 109548655 109548736 GNAI3|NM_006496.4|overlapping|CTG 0 + 109548655 109548655 0,0,0  1 81, 0,
chr1 109548674 109548683 GNAI3|NM_006496.4|non-overlapping|GTG 0 + 109548674 109548674 0,0,0  1 9, 0,
chr1 115642040 115651311 VANGL1|NM_138959.3|non-overlapping|GTG 0 + 115642040 115642040 0,0,0  2 46,35, 0,9236,
chr1 115651295 115651346 VANGL1|NM_138959.3|non-overlapping|GTG 0 + 115651295 115651295 0,0,0  1 51, 0,
chr1 116373293 116373311 ATP1A1|NM_000701.8|non-overlapping|ACG 0 + 116373293 116373293 0,0,0  1 18, 0,
chr1 116373345 116373399 ATP1A1|NM_000701.8|non-overlapping|ATC 0 + 116373345 116373345 0,0,0  1 54, 0,
chr1 116373409 116373466 ATP1A1|NM_000701.8|non-overlapping|TTG 0 + 116373409 116373409 0,0,0  1 57, 0,
chr1 116373418 116373466 ATP1A1|NM_000701.8|non-overlapping|CTG 0 + 116373418 116373418 0,0,0  1 48, 0,
chr1 116373443 116373500 ATP1A1|NM_000701.8|non-overlapping|CTG 0 + 116373443 116373443 0,0,0  1 57, 0,
chr1 116373448 116373466 ATP1A1|NM_000701.8|non-overlapping|CTG 0 + 116373448 116373448 0,0,0  1 18, 0,
chr1 116373462 116384024 ATP1A1|NM_000701.8|overlapping|CTG 0 + 116373462 116373462 0,0,0  2 61,11, 0,10551,
chr1 116373465 116384024 ATP1A1|NM_000701.8|overlapping|ATT 0 + 116373465 116373465 0,0,0  2 58,11, 0,10548,
chr1 150321578 150324976 PRPF3|NM_004698.4|overlapping|CTG 0 + 150321578 150321578 0,0,0  2 14,82, 0,3316,
chr1 150324902 150324917 PRPF3|NM_004698.4|non-overlapping|TTG 0 + 150324902 150324902 0,0,0  1 15, 0,
chr1 150324909 150324939 PRPF3|NM_004698.4|non-overlapping|CTG 0 + 150324909 150324909 0,0,0  1 30, 0,
chr1 150324920 150324971 PRPF3|NM_004698.4|overlapping|ATT 0 + 150324920 150324920 0,0,0  1 51, 0,
chr1 151282343 151291209 ZNF687|NM_020832.3|CDS_extension|CTG 0 + 151282343 151282343 0,0,0  9 52,2132,179,177,163,330,113,142,495, 0,3931,6184,6751,7034,7334,7778,8088,8371,
chr1 153990772 153992093 RPS27|NM_001030.6|CDS_extension|GTG 0 + 153990772 153990772 0,0,0  4 30,109,111,29, 0,342,793,1292,
chr1 155308854 155310141 FDPS|NM_001135822.2|overlapping|GTG 0 + 155308854 155308854 0,0,0  2 111,78, 0,1209,
chr1 155308905 155310141 FDPS|NM_001135822.2|overlapping|CTG 0 + 155308905 155308905 0,0,0  2 60,78, 0,1158,
chr1 155308947 155310141 FDPS|NM_001135822.2|overlapping|ATC 0 + 155308947 155308947 0,0,0  2 18,78, 0,1116,
chr1 156114750 156137764 LMNA|NM_005572.4|CDS_extension|ATC 0 + 156114750 156114750 0,0,0 10 524,157,126,171,126,221,223,108,120,111, 0,15866,19652,20054,20436,21150,21463,22170,22362,22903,
chr1 156114750 156139106 LMNA|NM_170707.4|CDS_extension|ATC 0 + 156114750 156114750 0,0,0 12 524,157,126,171,126,221,223,108,120,90,270,27, 0,15866,19652,20054,20436,21150,21463,22170,22362,22903,23737,24329,
chr1 156114785 156115037 LMNA|NM_005572.4|overlapping|ACG 0 + 156114785 156114785 0,0,0  1 252, 0,
chr1 156114789 156137764 LMNA|NM_005572.4|CDS_extension|CTG 0 + 156114789 156114789 0,0,0 10 485,157,126,171,126,221,223,108,120,111, 0,15827,19613,20015,20397,21111,21424,22131,22323,22864,
chr1 156114789 156139106 LMNA|NM_170707.4|CDS_extension|CTG 0 + 156114789 156114789 0,0,0 12 485,157,126,171,126,221,223,108,120,90,270,27, 0,15827,19613,20015,20397,21111,21424,22131,22323,22864,23698,24290,
chr1 156114845 156115037 LMNA|NM_005572.4|overlapping|CTG 0 + 156114845 156114845 0,0,0  1 192, 0,
chr1 160400583 160400601 VANGL2|NM_020335.3|non-overlapping|CTG 0 + 160400583 160400583 0,0,0  1 18, 0,
chr1 160400623 160400635 VANGL2|NM_020335.3|non-overlapping|ATG 0 + 160400623 160400623 0,0,0  1 12, 0,
chr1 161166499 161166568 PPOX|NM_000309.5|non-overlapping|GTG 0 + 161166499 161166499 0,0,0  1 69, 0,
chr1 162632493 162632589 DDR2|NM_006182.4|non-overlapping|ATG 0 + 162632493 162632493 0,0,0  1 96, 0,
chr1 164559407 164559443 PBX1|NM_002585.4|non-overlapping|ATG 0 + 164559407 164559407 0,0,0  1 36, 0,
chr1 164559482 164559728 PBX1|NM_002585.4|non-overlapping|CTG 0 + 164559482 164559482 0,0,0  1 246, 0,
chr1 164559503 164559728 PBX1|NM_002585.4|non-overlapping|CTG 0 + 164559503 164559503 0,0,0  1 225, 0,
chr1 164559529 164559844 PBX1|NM_002585.4|overlapping|GTG 0 + 164559529 164559529 0,0,0  1 315, 0,
chr1 164559550 164559844 PBX1|NM_002585.4|overlapping|TTG 0 + 164559550 164559550 0,0,0  1 294, 0,
chr1 164559666 164559717 PBX1|NM_002585.4|non-overlapping|ATT 0 + 164559666 164559666 0,0,0  1 51, 0,
chr1 164559713 164559728 PBX1|NM_002585.4|non-overlapping|CTG 0 + 164559713 164559713 0,0,0  1 15, 0,
chr1 171781673 171781691 EEF1AKNMT|NM_015935.5|non-overlapping|ATG 0 + 171781673 171781673 0,0,0  1 18, 0,
chr1 171781719 171781932 EEF1AKNMT|NM_015935.5|non-overlapping|GTG 0 + 171781719 171781719 0,0,0  1 213, 0,
chr1 171781778 171781799 EEF1AKNMT|NM_015935.5|non-overlapping|ATG 0 + 171781778 171781778 0,0,0  1 21, 0,
chr1 171781782 171781932 EEF1AKNMT|NM_015935.5|non-overlapping|GTG 0 + 171781782 171781782 0,0,0  1 150, 0,
chr1 171781836 171781932 EEF1AKNMT|NM_015935.5|non-overlapping|ATG 0 + 171781836 171781836 0,0,0  1 96, 0,
chr1 171781911 171781932 EEF1AKNMT|NM_015935.5|non-overlapping|ATG 0 + 171781911 171781911 0,0,0  1 21, 0,
chr1 180230293 180230533 LHX4|NM_033343.4|overlapping|ATG 0 + 180230293 180230293 0,0,0  1 240, 0,
chr1 180632039 180632060 XPR1|NM_004736.4|non-overlapping|ATG 0 + 180632039 180632039 0,0,0  1 21, 0,
chr1 180632119 180632269 XPR1|NM_004736.4|overlapping|ATG 0 + 180632119 180632119 0,0,0  1 150, 0,
chr1 203861609 203863699 SNRPE|NM_003094.4|overlapping|AAG 0 + 203861609 203861609 0,0,0  3 104,27,37, 0,586,2053,
chr1 218345418 218345466 TGFB2|NM_003238.6|non-overlapping|ATA 0 + 218345418 218345418 0,0,0  1 48, 0,
chr1 218345484 218345511 TGFB2|NM_003238.6|non-overlapping|ATG 0 + 218345484 218345484 0,0,0  1 27, 0,
chr1 226871305 226871353 PSEN2|NM_000447.3|non-overlapping|CTG 0 + 226871305 226871305 0,0,0  1 48, 0,
chr1 228082719 228082764 ARF1|NM_001024226.2|non-overlapping|TTG 0 + 228082719 228082719 0,0,0  1 45, 0,
chr1 228082740 228082764 ARF1|NM_001024226.2|non-overlapping|CTG 0 + 228082740 228082740 0,0,0  1 24, 0,
chr1 236394401 236394464 EDARADD|NM_145861.4|overlapping|ATG 0 + 236394401 236394401 0,0,0  1 63, 0,
chr1 236686534 236686726 ACTN2|NM_001103.4|overlapping|GTG 0 + 236686534 236686534 0,0,0  1 192, 0,
chr1 236686599 236686677 ACTN2|NM_001103.4|overlapping|GTG 0 + 236686599 236686599 0,0,0  1 78, 0,
chr1 237042252 237364367 RYR2|NM_001035.3|overlapping|CTG 0 + 237042252 237042252 0,0,0  5 317,120,105,21,10, 0,228244,288625,313712,322105,
chr1 237042298 237270498 RYR2|NM_001035.3|overlapping|GTG 0 + 237042298 237042298 0,0,0  2 271,2, 0,228198,
chr1 237042364 237270498 RYR2|NM_001035.3|overlapping|CTG 0 + 237042364 237042364 0,0,0  2 205,2, 0,228132,
chr2   3575265   3575334 RPS7|NM_001011.4|non-overlapping|CTG 0 +   3575265   3575265 0,0,0  1 69, 0,
chr2   3575298   3575334 RPS7|NM_001011.4|non-overlapping|TTG 0 +   3575298   3575298 0,0,0  1 36, 0,
chr2  15942015  15942129 MYCN|NM_005378.6|overlapping|ACG 0 +  15942015  15942015 0,0,0  1 114, 0,
chr2  26692780  26692879 KCNK3|NM_002246.3|overlapping|ATG 0 +  26692780  26692780 0,0,0  1 99, 0,
chr2  32063755  32063971 SPAST|NM_014946.4|overlapping|GTG 0 +  32063755  32063755 0,0,0  1 216, 0,
chr2  32064017  32154496 SPAST|NM_014946.4|CDS_truncation|CTG 0 +  32064017  32064017 0,0,0 17 229,87,84,96,188,134,94,75,72,76,92,80,43,80,71,41,123, 0,23474,25504,34778,50620,51684,52101,62930,64390,72545,72859,73091,77886,79318,80919,83200,90356,
chr2  32064041  32154496 SPAST|NM_014946.4|CDS_truncation|CTG 0 +  32064041  32064041 0,0,0 17 205,87,84,96,188,134,94,75,72,76,92,80,43,80,71,41,123, 0,23450,25480,34754,50596,51660,52077,62906,64366,72521,72835,73067,77862,79294,80895,83176,90332,
chr2  44941730  44941772 SIX3|NM_005413.4|non-overlapping|ATG 0 +  44941730  44941730 0,0,0  1 42, 0,
chr2  44941887  44942076 SIX3|NM_005413.4|non-overlapping|ATG 0 +  44941887  44941887 0,0,0  1 189, 0,
chr2  47783175  47783190 MSH6|NM_000179.3|non-overlapping|ATG 0 +  47783175  47783175 0,0,0  1 15, 0,
chr2  69013421  69013436 ANTXR1|NM_032208.3|non-overlapping|ATG 0 +  69013421  69013421 0,0,0  1 15, 0,
chr2  73893024  73919575 ACTG2|NM_001615.4|CDS_extension|CTG 0 +  73893024  73893024 0,0,0  9 27,162,129,111,85,162,192,182,144, 0,8251,9335,15648,16030,20460,21655,23559,26407,
chr2 108719568 108719610 RANBP2|NM_006267.5|overlapping|CTG 0 + 108719568 108719568 0,0,0  1 42, 0,
chr2 120797307 120797319 GLI2|NM_005270.5|non-overlapping|ATG 0 + 120797307 120797307 0,0,0  1 12, 0,
chr2 148021039 148178739 MBD5|NM_018328.5|non-overlapping|ATG 0 + 148021039 148021039 0,0,0  3 7,37,40, 0,608,157660,
chr2 148178712 148178739 MBD5|NM_018328.5|non-overlapping|ATG 0 + 148178712 148178712 0,0,0  1 27, 0,
chr2 148875250 148875283 KIF5C|NM_004522.3|non-overlapping|ATG 0 + 148875250 148875250 0,0,0  1 33, 0,
chr2 148875479 148875491 KIF5C|NM_004522.3|non-overlapping|ATG 0 + 148875479 148875479 0,0,0  1 12, 0,
chr2 156435630 156435684 GPD2|NM_001083112.3|non-overlapping|CTG 0 + 156435630 156435630 0,0,0  1 54, 0,
chr2 156435683 156435764 GPD2|NM_001083112.3|non-overlapping|ACG 0 + 156435683 156435683 0,0,0  1 81, 0,
chr2 165294061 165294073 SCN2A|NM_021007.3|non-overlapping|ATG 0 + 165294061 165294061 0,0,0  1 12, 0,
chr2 176092837 176092894 HOXD13|NM_000523.4|overlapping|ATG 0 + 176092837 176092837 0,0,0  1 57, 0,
chr2 188974420 188974435 COL3A1|NM_000090.4|non-overlapping|ATG 0 + 188974420 188974420 0,0,0  1 15, 0,
chr2 188974472 188974487 COL3A1|NM_000090.4|non-overlapping|ATG 0 + 188974472 188974472 0,0,0  1 15, 0,
chr2 190880862 190881060 GLS|NM_014905.5|non-overlapping|ATC 0 + 190880862 190880862 0,0,0  1 198, 0,
chr2 190880925 190881060 GLS|NM_014905.5|non-overlapping|ATC 0 + 190880925 190880925 0,0,0  1 135, 0,
chr2 190880930 190881071 GLS|NM_014905.5|non-overlapping|CTG 0 + 190880930 190880930 0,0,0  1 141, 0,
chr2 190880965 190881088 GLS|NM_014905.5|overlapping|CTG 0 + 190880965 190880965 0,0,0  1 123, 0,
chr2 190880985 190881060 GLS|NM_014905.5|non-overlapping|ATC 0 + 190880985 190880985 0,0,0  1 75, 0,
chr2 190881045 190881060 GLS|NM_014905.5|non-overlapping|ATC 0 + 190881045 190881045 0,0,0  1 15, 0,
chr2 201183188 201183239 CASP10|NM_032977.4|non-overlapping|ATG 0 + 201183188 201183188 0,0,0  1 51, 0,
chr2 201233508 201234111 CASP8|NM_001228.4|non-overlapping|CTG 0 + 201233508 201233508 0,0,0  2 114,96, 0,507,
chr2 201233525 201233558 CASP8|NM_001228.4|non-overlapping|CTG 0 + 201233525 201233525 0,0,0  1 33, 0,
chr2 201233554 201233599 CASP8|NM_001228.4|non-overlapping|GTG 0 + 201233554 201233554 0,0,0  1 45, 0,
chr2 201233561 201233573 CASP8|NM_001228.4|non-overlapping|GTG 0 + 201233561 201233561 0,0,0  1 12, 0,
chr2 201234062 201234074 CASP8|NM_001228.4|non-overlapping|TTG 0 + 201234062 201234062 0,0,0  1 12, 0,
chr2 202376361 202376577 BMPR2|NM_001204.7|non-overlapping|CTG 0 + 202376361 202376361 0,0,0  1 216, 0,
chr2 202376469 202376577 BMPR2|NM_001204.7|non-overlapping|ACG 0 + 202376469 202376469 0,0,0  1 108, 0,
chr2 202376642 202376660 BMPR2|NM_001204.7|non-overlapping|ATC 0 + 202376642 202376642 0,0,0  1 18, 0,
chr2 202376828 202376891 BMPR2|NM_001204.7|non-overlapping|ACG 0 + 202376828 202376828 0,0,0  1 63, 0,
chr2 202376887 202377151 BMPR2|NM_001204.7|non-overlapping|TTG 0 + 202376887 202376887 0,0,0  1 264, 0,
chr2 202376987 202377056 BMPR2|NM_001204.7|non-overlapping|ATG 0 + 202376987 202376987 0,0,0  1 69, 0,
chr2 202377111 202377168 BMPR2|NM_001204.7|non-overlapping|ATG 0 + 202377111 202377111 0,0,0  1 57, 0,
chr2 202377209 202377284 BMPR2|NM_001204.7|non-overlapping|ATG 0 + 202377209 202377209 0,0,0  1 75, 0,
chr2 208266271 208266277 PIKFYVE|NM_015040.4|non-overlapping|ATG 0 + 208266271 208266271 0,0,0  1 6, 0,
chr2 208266352 208266364 PIKFYVE|NM_015040.4|non-overlapping|CTG 0 + 208266352 208266352 0,0,0  1 12, 0,
chr2 238848102 238848519 TWIST2|NM_057179.3|overlapping|ATC 0 + 238848102 238848102 0,0,0  1 417, 0,
chr3   4493356   4493374 ITPR1|NM_002222.7|non-overlapping|ATG 0 +   4493356   4493356 0,0,0  1 18, 0,
chr3   4493529   4493553 ITPR1|NM_002222.7|non-overlapping|ATG 0 +   4493529   4493529 0,0,0  1 24, 0,
chr3   9397882   9397903 SETD5|NM_001080517.3|non-overlapping|GTG 0 +   9397882   9397882 0,0,0  1 21, 0,
chr3   9397911   9424490 SETD5|NM_001080517.3|non-overlapping|CTG 0 +   9397911   9397911 0,0,0  2 66,24, 0,26555,
chr3   9424491   9424524 SETD5|NM_001080517.3|non-overlapping|TTG 0 +   9424491   9424491 0,0,0  1 33, 0,
chr3   9428830   9428911 SETD5|NM_001080517.3|non-overlapping|ATG 0 +   9428830   9428830 0,0,0  1 81, 0,
chr3   9428841   9428898 SETD5|NM_001080517.3|non-overlapping|ATG 0 +   9428841   9428841 0,0,0  1 57, 0,
chr3   9649540   9649564 MTMR14|NM_022485.5|non-overlapping|ATG 0 +   9649540   9649540 0,0,0  1 24, 0,
chr3   9731828   9734162 BRPF1|NM_001003694.2|overlapping|CTG 0 +   9731828   9731828 0,0,0  2 310,32, 0,2302,
chr3   9731964   9734136 BRPF1|NM_001003694.2|non-overlapping|ATC 0 +   9731964   9731964 0,0,0  2 174,6, 0,2166,
chr3   9732009   9734136 BRPF1|NM_001003694.2|non-overlapping|GTG 0 +   9732009   9732009 0,0,0  2 129,6, 0,2121,
chr3   9732114   9734136 BRPF1|NM_001003694.2|non-overlapping|ATG 0 +   9732114   9732114 0,0,0  2 24,6, 0,2016,
chr3   9933907   9934436 CRELD1|NM_001031717.4|non-overlapping|GTG 0 +   9933907   9933907 0,0,0  2 13,17, 0,512,
chr3   9934159   9934216 CRELD1|NM_015513.6|non-overlapping|CTG 0 +   9934159   9934159 0,0,0  1 57, 0,
chr3   9934209   9934317 CRELD1|NM_015513.6|non-overlapping|ATG 0 +   9934209   9934209 0,0,0  1 108, 0,
chr3  12004436  12140692 SYN2|NM_003178.6|overlapping|CTG 0 +  12004436  12004436 0,0,0  2 492,42, 0,136214,
chr3  14125071  14129487 TMEM43|NM_024334.3|overlapping|CTG 0 +  14125071  14125071 0,0,0  2 134,76, 0,4340,
chr3  14125096  14125153 TMEM43|NM_024334.3|non-overlapping|CTG 0 +  14125096  14125096 0,0,0  1 57, 0,
chr3  14125102  14125153 TMEM43|NM_024334.3|non-overlapping|CTG 0 +  14125102  14125102 0,0,0  1 51, 0,
chr3  14125125  14129487 TMEM43|NM_024334.3|overlapping|ACG 0 +  14125125  14125125 0,0,0  2 80,76, 0,4286,
chr3  14125153  14129452 TMEM43|NM_024334.3|overlapping|CTG 0 +  14125153  14125153 0,0,0  2 52,41, 0,4258,
chr3  30606618  30644750 TGFBR2|NM_003242.6|overlapping|ACG 0 +  30606618  30606618 0,0,0  2 359,4, 0,38128,
chr3  30606618  30623226 TGFBR2|NM_001024847.2|overlapping|ACG 0 +  30606618  30606618 0,0,0  2 359,28, 0,16580,
chr3  30606663  30644750 TGFBR2|NM_003242.6|overlapping|CTG 0 +  30606663  30606663 0,0,0  2 314,4, 0,38083,
chr3  30606663  30623226 TGFBR2|NM_001024847.2|overlapping|CTG 0 +  30606663  30606663 0,0,0  2 314,28, 0,16535,
chr3  30606725  30644761 TGFBR2|NM_003242.6|overlapping|CTG 0 +  30606725  30606725 0,0,0  2 252,15, 0,38021,
chr3  30606725  30623267 TGFBR2|NM_001024847.2|overlapping|CTG 0 +  30606725  30606725 0,0,0  2 252,69, 0,16473,
chr3  30606846  30644750 TGFBR2|NM_003242.6|overlapping|CTG 0 +  30606846  30606846 0,0,0  2 131,4, 0,37900,
chr3  30606846  30623226 TGFBR2|NM_001024847.2|overlapping|CTG 0 +  30606846  30606846 0,0,0  2 131,28, 0,16352,
chr3  36993536  36993596 MLH1|NM_000249.4|overlapping|CTG 0 +  36993536  36993536 0,0,0  1 60, 0,
chr3  39406733  39407670 RPSA|NM_002295.6|overlapping|CTG 0 +  39406733  39406733 0,0,0  2 31,50, 0,887,
chr3  39407620  39407638 RPSA|NM_002295.6|non-overlapping|ATT 0 +  39407620  39407620 0,0,0  1 18, 0,
chr3  41199582  41199669 CTNNB1|NM_001904.4|non-overlapping|CTG 0 +  41199582  41199582 0,0,0  1 87, 0,
chr3  41199629  41224534 CTNNB1|NM_001904.4|overlapping|ACG 0 +  41199629  41199629 0,0,0  3 41,61,9, 0,24391,24896,
chr3  47803170  47803206 DHX30|NM_138615.3|non-overlapping|ATG 0 +  47803170  47803170 0,0,0  1 36, 0,
chr3  47805344  47805419 DHX30|NM_138615.3|non-overlapping|ATG 0 +  47805344  47805344 0,0,0  1 75, 0,
chr3  50617533  50617683 MAPKAPK3|NM_001243926.2|overlapping|CTG 0 +  50617533  50617533 0,0,0  1 150, 0,
chr3  58008436  58008574 FLNB|NM_001457.4|overlapping|GTG 0 +  58008436  58008436 0,0,0  1 138, 0,
chr3  58008502  58008574 FLNB|NM_001457.4|overlapping|TTG 0 +  58008502  58008502 0,0,0  1 72, 0,
chr3  63898442  63898460 ATXN7|NM_000333.4|non-overlapping|ATG 0 +  63898442  63898442 0,0,0  1 18, 0,
chr3  87227403  87227520 CHMP2B|NM_014043.4|non-overlapping|CTG 0 +  87227403  87227403 0,0,0  1 117, 0,
chr3 111542221 111542233 CD96|NM_198196.3|non-overlapping|ATG 0 + 111542221 111542221 0,0,0  1 12, 0,
chr3 119294412 119294445 ARHGAP31|NM_020754.4|non-overlapping|ATG 0 + 119294412 119294412 0,0,0  1 33, 0,
chr3 119294789 119294828 ARHGAP31|NM_020754.4|non-overlapping|ATG 0 + 119294789 119294789 0,0,0  1 39, 0,
chr3 127598440 127599483 MCM2|NM_004526.4|overlapping|GTG 0 + 127598440 127598440 0,0,0  2 32,166, 0,877,
chr3 128052439 128055570 SEC61A1|NM_013336.4|overlapping|GTG 0 + 128052439 128052439 0,0,0  3 120,68,55, 0,395,3076,
chr3 128052455 128052521 SEC61A1|NM_013336.4|non-overlapping|CTG 0 + 128052455 128052455 0,0,0  1 66, 0,
chr3 128052475 128055570 SEC61A1|NM_013336.4|overlapping|CTG 0 + 128052475 128052475 0,0,0  3 84,68,55, 0,359,3040,
chr3 128052499 128055570 SEC61A1|NM_013336.4|overlapping|ACG 0 + 128052499 128052499 0,0,0  3 60,68,55, 0,335,3016,
chr3 128052512 128052521 SEC61A1|NM_013336.4|non-overlapping|CTG 0 + 128052512 128052512 0,0,0  1 9, 0,
chr3 128052517 128055570 SEC61A1|NM_013336.4|overlapping|CTG 0 + 128052517 128052517 0,0,0  3 42,68,55, 0,317,2998,
chr3 128726252 128795378 RAB7A|NM_004637.6|overlapping|CTG 0 + 128726252 128726252 0,0,0  2 107,19, 0,69107,
chr3 128726265 128795364 RAB7A|NM_004637.6|non-overlapping|TTG 0 + 128726265 128726265 0,0,0  2 94,5, 0,69094,
chr3 128726281 128726296 RAB7A|NM_004637.6|non-overlapping|CTG 0 + 128726281 128726281 0,0,0  1 15, 0,
chr3 128726322 128795364 RAB7A|NM_004637.6|non-overlapping|ACG 0 + 128726322 128726322 0,0,0  2 37,5, 0,69037,
chr3 130894714 130930441 ATP2C1|NM_014382.5|overlapping|GTG 0 + 130894714 130894714 0,0,0  2 61,26, 0,35701,
chr3 130894741 130930441 ATP2C1|NM_014382.5|overlapping|ATC 0 + 130894741 130894741 0,0,0  2 34,26, 0,35674,
chr3 158571212 158571329 MLF1|NM_022443.5|overlapping|CTG 0 + 158571212 158571212 0,0,0  1 117, 0,
chr3 158571250 158571316 MLF1|NM_022443.5|overlapping|ATC 0 + 158571250 158571250 0,0,0  1 66, 0,
chr3 167735793 167735883 SERPINI1|NM_005025.5|non-overlapping|ATC 0 + 167735793 167735793 0,0,0  1 90, 0,
chr3 181711941 181712007 SOX2|NM_003106.4|non-overlapping|TTG 0 + 181711941 181711941 0,0,0  1 66, 0,
chr3 181712031 181712076 SOX2|NM_003106.4|non-overlapping|CTG 0 + 181712031 181712031 0,0,0  1 45, 0,
chr3 183635720 183643511 KLHL24|NM_017644.3|non-overlapping|CTG 0 + 183635720 183635720 0,0,0  2 73,32, 0,7759,
chr3 183635756 183643511 KLHL24|NM_017644.3|non-overlapping|GTG 0 + 183635756 183635756 0,0,0  2 37,32, 0,7723,
chr3 183650308 183650341 KLHL24|NM_017644.3|non-overlapping|ATC 0 + 183650308 183650308 0,0,0  1 33, 0,
chr3 184155506 184155539 DVL3|NM_004423.4|non-overlapping|CTG 0 + 184155506 184155506 0,0,0  1 33, 0,
chr3 184155530 184155539 DVL3|NM_004423.4|non-overlapping|CTG 0 + 184155530 184155530 0,0,0  1 9, 0,
chr3 184314609 184314672 EIF4G1|NM_198241.3|non-overlapping|ATG 0 + 184314609 184314609 0,0,0  1 63, 0,
chr3 184315496 184315800 EIF4G1|NM_198241.3|overlapping|ATG 0 + 184315496 184315496 0,0,0  2 49,38, 0,266,
chr3 184315521 184315780 EIF4G1|NM_198241.3|non-overlapping|GTG 0 + 184315521 184315521 0,0,0  2 24,18, 0,241,
chr3 186570827 186572109 DNAJB11|NM_016306.6|overlapping|CTG 0 + 186570827 186570827 0,0,0  2 138,15, 0,1267,
chr3 188225445 188225457 LPP|NM_005578.5|non-overlapping|CTG 0 + 188225445 188225445 0,0,0  1 12, 0,
chr3 193593225 193614742 OPA1|NM_015560.3|overlapping|ATG 0 + 193593225 193593225 0,0,0  2 184,20, 0,21497,
chr3 193593256 193593274 OPA1|NM_015560.3|non-overlapping|CTG 0 + 193593256 193593256 0,0,0  1 18, 0,
chr3 193593312 193614742 OPA1|NM_015560.3|overlapping|CTG 0 + 193593312 193593312 0,0,0  2 97,20, 0,21410,
chr3 197950203 197950959 RPL35A|NM_000996.4|non-overlapping|ATC 0 + 197950203 197950203 0,0,0  2 18,24, 0,732,
chr4   1793888   1793909 FGFR3|NM_000142.5|non-overlapping|ATG 0 +   1793888   1793888 0,0,0  1 21, 0,
chr4   3074700   3074766 HTT|NM_002111.8|non-overlapping|ATG 0 +   3074700   3074700 0,0,0  1 66, 0,
chr4   4859697   4859916 MSX1|NM_002448.3|overlapping|CTG 0 +   4859697   4859697 0,0,0  1 219, 0,
chr4   4859745   4859916 MSX1|NM_002448.3|overlapping|CTG 0 +   4859745   4859745 0,0,0  1 171, 0,
chr4   4859849   4859921 MSX1|NM_002448.3|overlapping|ATG 0 +   4859849   4859849 0,0,0  1 72, 0,
chr4   6269892   6277619 WFS1|NM_006005.3|overlapping|ATT 0 +   6269892   6269892 0,0,0  2 122,169, 0,7558,
chr4   6269956   6302468 WFS1|NM_006005.3|CDS_extension|CTG 0 +   6269956   6269956 0,0,0  8 58,237,83,145,171,81,149,1812, 0,7494,17136,19030,21240,21960,25084,30700,
chr4  54657971  54695608 KIT|NM_000222.3|overlapping|CTG 0 +  54657971  54657971 0,0,0  2 110,97, 0,37540,
chr4  56907926  56908046 REST|NM_005612.5|non-overlapping|ATG 0 +  56907926  56907926 0,0,0  1 120, 0,
chr4  70518612  70518774 AMTN|NM_212557.4|non-overlapping|CTG 0 +  70518612  70518612 0,0,0  2 42,12, 0,150,
chr4  88007665  88007728 PKD2|NM_000297.4|non-overlapping|ATG 0 +  88007665  88007665 0,0,0  1 63, 0,
chr4  94207882  94208349 SMARCAD1|NM_001128429.3|non-overlapping|ATG 0 +  94207882  94207882 0,0,0  2 188,4, 0,463,
chr4 102501422 102501548 NFKB1|NM_003998.4|non-overlapping|CTG 0 + 102501422 102501422 0,0,0  1 126, 0,
chr4 102501480 102501738 NFKB1|NM_003998.4|non-overlapping|CTG 0 + 102501480 102501480 0,0,0  1 258, 0,
chr4 102501607 102501622 NFKB1|NM_003998.4|non-overlapping|ATG 0 + 102501607 102501607 0,0,0  1 15, 0,
chr4 119135860 119135884 MYOZ2|NM_016599.5|non-overlapping|ATG 0 + 119135860 119135860 0,0,0  1 24, 0,
chr4 139301546 139301588 NAA15|NM_057175.5|non-overlapping|ACG 0 + 139301546 139301546 0,0,0  1 42, 0,
chr4 139301559 139301631 NAA15|NM_057175.5|non-overlapping|GTG 0 + 139301559 139301559 0,0,0  1 72, 0,
chr4 139301584 139301731 NAA15|NM_057175.5|non-overlapping|GTG 0 + 139301584 139301584 0,0,0  1 147, 0,
chr4 139301619 139301631 NAA15|NM_057175.5|non-overlapping|GTG 0 + 139301619 139301619 0,0,0  1 12, 0,
chr4 139301635 139301731 NAA15|NM_057175.5|non-overlapping|ACG 0 + 139301635 139301635 0,0,0  1 96, 0,
chr4 139301686 139301731 NAA15|NM_057175.5|non-overlapping|CTG 0 + 139301686 139301686 0,0,0  1 45, 0,
chr4 147481106 147481115 EDNRA|NM_001957.4|non-overlapping|CTG 0 + 147481106 147481106 0,0,0  1 9, 0,
chr4 147481237 147485634 EDNRA|NM_001957.4|non-overlapping|CTG 0 + 147481237 147481237 0,0,0  2 139,23, 0,4374,
chr4 165873292 165873313 TLL1|NM_012464.5|non-overlapping|CTG 0 + 165873292 165873292 0,0,0  1 21, 0,
chr4 165873330 165873384 TLL1|NM_012464.5|non-overlapping|ATG 0 + 165873330 165873330 0,0,0  1 54, 0,
chr4 165873383 165873518 TLL1|NM_012464.5|non-overlapping|ATG 0 + 165873383 165873383 0,0,0  1 135, 0,
chr4 165873755 165873773 TLL1|NM_012464.5|non-overlapping|ATG 0 + 165873755 165873755 0,0,0  1 18, 0,
chr4 184649823 184649835 PRIMPOL|NM_152683.4|non-overlapping|ACG 0 + 184649823 184649823 0,0,0  1 12, 0,
chr4 184649873 184657091 PRIMPOL|NM_152683.4|non-overlapping|CTG 0 + 184649873 184649873 0,0,0  3 35,78,10, 0,2149,7208,
chr4 185143304 185143400 SLC25A4|NM_001151.4|overlapping|GTG 0 + 185143304 185143304 0,0,0  1 96, 0,
chr4 186069199 186076623 TLR3|NM_003265.3|overlapping|ATG 0 + 186069199 186069199 0,0,0  2 49,11, 0,7413,
chr5  14143353  14143386 TRIO|NM_007118.4|non-overlapping|ATG 0 +  14143353  14143353 0,0,0  1 33, 0,
chr5  14143541  14143679 TRIO|NM_007118.4|non-overlapping|ATG 0 +  14143541  14143541 0,0,0  1 138, 0,
chr5  36608384  36608420 SLC1A3|NM_004172.5|non-overlapping|CTG 0 +  36608384  36608384 0,0,0  1 36, 0,
chr5  36606612  36606705 SLC1A3|NM_004172.5|non-overlapping|ATG 0 +  36606612  36606612 0,0,0  1 93, 0,
chr5  36606677  36608420 SLC1A3|NM_004172.5|non-overlapping|CTG 0 +  36606677  36606677 0,0,0  2 58,92, 0,1651,
chr5  36876883  36877123 NIPBL|NM_133433.4|non-overlapping|AGG 0 +  36876883  36876883 0,0,0  1 240, 0,
chr5  36876891  36876948 NIPBL|NM_133433.4|non-overlapping|ACG 0 +  36876891  36876891 0,0,0  1 57, 0,
chr5  36876933  36876948 NIPBL|NM_133433.4|non-overlapping|ATG 0 +  36876933  36876933 0,0,0  1 15, 0,
chr5  36876983  36877073 NIPBL|NM_133433.4|non-overlapping|ATG 0 +  36876983  36876983 0,0,0  1 90, 0,
chr5  36877057  36877123 NIPBL|NM_133433.4|non-overlapping|ATG 0 +  36877057  36877057 0,0,0  1 66, 0,
chr5  36953627  36953660 NIPBL|NM_133433.4|non-overlapping|ATG 0 +  36953627  36953627 0,0,0  1 33, 0,
chr5  38846077  38869045 OSMR|NM_003999.3|non-overlapping|ACG 0 +  38846077  38846077 0,0,0  2 310,14, 0,22954,
chr5  38846105  38869115 OSMR|NM_003999.3|overlapping|GTG 0 +  38846105  38846105 0,0,0  2 282,84, 0,22926,
chr5  38846126  38869115 OSMR|NM_003999.3|overlapping|GTG 0 +  38846126  38846126 0,0,0  2 261,84, 0,22905,
chr5  38846167  38869045 OSMR|NM_003999.3|non-overlapping|CTG 0 +  38846167  38846167 0,0,0  2 220,14, 0,22864,
chr5  38846215  38869045 OSMR|NM_003999.3|non-overlapping|CTG 0 +  38846215  38846215 0,0,0  2 172,14, 0,22816,
chr5  38846256  38869032 OSMR|NM_003999.3|non-overlapping|CTG 0 +  38846256  38846256 0,0,0  2 131,1, 0,22775,
chr5  38846347  38869045 OSMR|NM_003999.3|non-overlapping|ACG 0 +  38846347  38846347 0,0,0  2 40,14, 0,22684,
chr5  52989416  53026820 ITGA2|NM_002203.4|overlapping|CTG 0 +  52989416  52989416 0,0,0  2 116,73, 0,37331,
chr5  62306225  62306468 KIF2A|NM_001098511.3|non-overlapping|ACG 0 +  62306225  62306225 0,0,0  1 243, 0,
chr5  62306281  62306473 KIF2A|NM_001098511.3|non-overlapping|CTG 0 +  62306281  62306281 0,0,0  1 192, 0,
chr5  62306464  62306473 KIF2A|NM_001098511.3|non-overlapping|ATG 0 +  62306464  62306464 0,0,0  1 9, 0,
chr5  68226332  68226416 PIK3R1|NM_181523.3|non-overlapping|ATG 0 +  68226332  68226332 0,0,0  1 84, 0,
chr5  68215816  68226345 PIK3R1|NM_181523.3|non-overlapping|CTG 0 +  68215816  68215816 0,0,0  2 133,56, 0,10473,
chr5  68226483  68226618 PIK3R1|NM_181523.3|non-overlapping|ATG 0 +  68226483  68226483 0,0,0  1 135, 0,
chr5  83471721  83471751 VCAN|NM_004385.5|non-overlapping|ATG 0 +  83471721  83471721 0,0,0  1 30, 0,
chr5  83471937  83471943 VCAN|NM_004385.5|non-overlapping|ATG 0 +  83471937  83471937 0,0,0  1 6, 0,
chr5  87267903  87267987 RASA1|NM_002890.3|non-overlapping|GTG 0 +  87267903  87267903 0,0,0  1 84, 0,
chr5  87267983  87268064 RASA1|NM_002890.3|non-overlapping|ATG 0 +  87267983  87267983 0,0,0  1 81, 0,
chr5  87268164  87268182 RASA1|NM_002890.3|non-overlapping|ATG 0 +  87268164  87268164 0,0,0  1 18, 0,
chr5  87268340  87268352 RASA1|NM_002890.3|non-overlapping|CTG 0 +  87268340  87268340 0,0,0  1 12, 0,
chr5  93583386  93583518 NR2F1|NM_005654.6|non-overlapping|CTG 0 +  93583386  93583386 0,0,0  1 132, 0,
chr5  93583429  93583600 NR2F1|NM_005654.6|non-overlapping|TTG 0 +  93583429  93583429 0,0,0  1 171, 0,
chr5  93583477  93583600 NR2F1|NM_005654.6|non-overlapping|TTG 0 +  93583477  93583477 0,0,0  1 123, 0,
chr5  93583493  93583658 NR2F1|NM_005654.6|non-overlapping|ATT 0 +  93583493  93583493 0,0,0  1 165, 0,
chr5  93583497  93583518 NR2F1|NM_005654.6|non-overlapping|CTG 0 +  93583497  93583497 0,0,0  1 21, 0,
chr5  93583596  93583635 NR2F1|NM_005654.6|non-overlapping|ATG 0 +  93583596  93583596 0,0,0  1 39, 0,
chr5  93583667  93583697 NR2F1|NM_005654.6|non-overlapping|ATT 0 +  93583667  93583667 0,0,0  1 30, 0,
chr5  93583859  93583877 NR2F1|NM_005654.6|non-overlapping|ATT 0 +  93583859  93583859 0,0,0  1 18, 0,
chr5  93583967  93584426 NR2F1|NM_005654.6|non-overlapping|GTG 0 +  93583967  93583967 0,0,0  1 459, 0,
chr5  93584020  93584074 NR2F1|NM_005654.6|non-overlapping|ATG 0 +  93584020  93584020 0,0,0  1 54, 0,
chr5  93584359  93584389 NR2F1|NM_005654.6|non-overlapping|ATG 0 +  93584359  93584359 0,0,0  1 30, 0,
chr5  93584576  93584822 NR2F1|NM_005654.6|non-overlapping|TTG 0 +  93584576  93584576 0,0,0  1 246, 0,
chr5 123089431 123089437 PRDM6|NM_001136239.4|non-overlapping|ATG 0 + 123089431 123089431 0,0,0  1 6, 0,
chr5 126777162 126777630 LMNB1|NM_005573.4|overlapping|GTG 0 + 126777162 126777162 0,0,0  1 468, 0,
chr5 126777226 126777298 LMNB1|NM_005573.4|non-overlapping|ATT 0 + 126777226 126777226 0,0,0  1 72, 0,
chr5 126777240 126777630 LMNB1|NM_005573.4|overlapping|GTG 0 + 126777240 126777240 0,0,0  1 390, 0,
chr5 126777293 126777305 LMNB1|NM_005573.4|non-overlapping|ATT 0 + 126777293 126777293 0,0,0  1 12, 0,
chr5 126777390 126777630 LMNB1|NM_005573.4|overlapping|CTG 0 + 126777390 126777390 0,0,0  1 240, 0,
chr5 136029010 136029028 TGFBI|NM_000358.3|non-overlapping|TTG 0 + 136029010 136029010 0,0,0  1 18, 0,
chr5 138753439 138781971 CTNNA1|NM_001903.5|overlapping|CTG 0 + 138753439 138753439 0,0,0  2 71,49, 0,28483,
chr5 139279092 139279113 MATR3|NM_199189.3|non-overlapping|ATG 0 + 139279092 139279092 0,0,0  1 21, 0,
chr5 139274137 139278362 MATR3|NM_199189.3|non-overlapping|CTG 0 + 139274137 139274137 0,0,0  3 24,30,36, 0,1983,4189,
chr5 139276138 139278362 MATR3|NM_199189.3|non-overlapping|ATG 0 + 139276138 139276138 0,0,0  2 12,36, 0,2188,
chr5 139279064 139279100 MATR3|NM_199189.3|non-overlapping|ATG 0 + 139279064 139279064 0,0,0  1 36, 0,
chr5 147881468 147882050 SCGB3A2|NM_054023.5|CDS_truncation|GTG 0 + 147881468 147881468 0,0,0  2 180,24, 0,558,
chr5 148384015 148384039 FBXO38|NM_030793.5|non-overlapping|ATA 0 + 148384015 148384015 0,0,0  1 24, 0,
chr5 148394744 148394801 FBXO38|NM_030793.5|overlapping|ATT 0 + 148394744 148394744 0,0,0  1 57, 0,
chr5 148394759 148394801 FBXO38|NM_030793.5|overlapping|CTG 0 + 148394759 148394759 0,0,0  1 42, 0,
chr5 157266174 157285365 CYFIP2|NM_001037333.3|overlapping|CTG 0 + 157266174 157266174 0,0,0  2 21,27, 0,19164,
chr5 174724605 174724647 MSX2|NM_002449.5|non-overlapping|CTG 0 + 174724605 174724605 0,0,0  1 42, 0,
chr6   1609939   1609951 FOXC1|NM_001453.3|non-overlapping|ATG 0 +   1609939   1609939 0,0,0  1 12, 0,
chr6   3000003   3006484 NQO2|NM_000904.6|non-overlapping|CTG 0 +   3000003   3000003 0,0,0  2 82,17, 0,6464,
chr6   3006493   3010084 NQO2|NM_000904.6|overlapping|ACG 0 +   3006493   3006493 0,0,0  2 66,60, 0,3531,
chr6   7541716   7541890 DSP|NM_004415.4|non-overlapping|CTG 0 +   7541716   7541716 0,0,0  1 174, 0,
chr6   7541835   7541919 DSP|NM_004415.4|overlapping|TTG 0 +   7541835   7541835 0,0,0  1 84, 0,
chr6   7541875   7541890 DSP|NM_004415.4|non-overlapping|ATG 0 +   7541875   7541875 0,0,0  1 15, 0,
chr6  10585812  10585851 GCNT2|NM_145655.4|non-overlapping|ATG 0 +  10585812  10585812 0,0,0  1 39, 0,
chr6  24774990  24775116 GMNN|NM_015895.5|non-overlapping|CTG 0 +  24774990  24774990 0,0,0  1 126, 0,
chr6  24775020  24775116 GMNN|NM_015895.5|non-overlapping|GTG 0 +  24775020  24775020 0,0,0  1 96, 0,
chr6  26087420  26087477 HFE|NM_000410.4|overlapping|GTG 0 +  26087420  26087420 0,0,0  1 57, 0,
chr6  26156362  26156527 HIST1H1E|NM_005321.3|overlapping|ATT 0 +  26156362  26156362 0,0,0  1 165, 0,
chr6  30720365  30720479 TUBB|NM_178014.4|non-overlapping|CTG 0 +  30720365  30720365 0,0,0  1 114, 0,
chr6  30720399  30720504 TUBB|NM_178014.4|non-overlapping|CTG 0 +  30720399  30720399 0,0,0  1 105, 0,
chr6  30720408  30720504 TUBB|NM_178014.4|non-overlapping|ATT 0 +  30720408  30720408 0,0,0  1 96, 0,
chr6  30720424  30722556 TUBB|NM_178014.4|overlapping|CTG 0 +  30720424  30720424 0,0,0  2 139,20, 0,2112,
chr6  30720446  30720479 TUBB|NM_178014.4|non-overlapping|ATT 0 +  30720446  30720446 0,0,0  1 33, 0,
chr6  30720466  30722556 TUBB|NM_178014.4|overlapping|ATA 0 +  30720466  30720466 0,0,0  2 97,20, 0,2070,
chr6  31575633  31575666 TNF|NM_000594.4|non-overlapping|CTG 0 +  31575633  31575633 0,0,0  1 33, 0,
chr6  31575667  31575745 TNF|NM_000594.4|overlapping|AAG 0 +  31575667  31575667 0,0,0  1 78, 0,
chr6  34237209  34240784 HMGA1|NM_145899.3|overlapping|ATT 0 +  34237209  34237209 0,0,0  2 108,48, 0,3527,
chr6  34240746  34240770 HMGA1|NM_145899.3|non-overlapping|ATC 0 +  34240746  34240746 0,0,0  1 24, 0,
chr6  42984583  42984688 PPP2R5D|NM_006245.4|overlapping|GTG 0 +  42984583  42984583 0,0,0  1 105, 0,
chr6  42984610  42984688 PPP2R5D|NM_006245.4|overlapping|GTG 0 +  42984610  42984610 0,0,0  1 78, 0,
chr6  45328360  45328411 RUNX2|NM_001024630.4|non-overlapping|GTG 0 +  45328360  45328360 0,0,0  1 51, 0,
chr6  45328411  45328665 RUNX2|NM_001024630.4|non-overlapping|ATG 0 +  45328411  45328411 0,0,0  2 49,5, 0,249,
chr6  72622128  72622185 KCNQ5|NM_001160133.2|non-overlapping|ATG 0 +  72622128  72622128 0,0,0  1 57, 0,
chr6  75749289  75817504 MYO6|NM_004999.4|non-overlapping|CTG 0 +  75749289  75749289 0,0,0  2 134,4, 0,68211,
chr6  75749300  75749387 MYO6|NM_004999.4|non-overlapping|CTG 0 +  75749300  75749300 0,0,0  1 87, 0,
chr6  75749336  75749387 MYO6|NM_004999.4|non-overlapping|CTG 0 +  75749336  75749336 0,0,0  1 51, 0,
chr6  75749345  75749387 MYO6|NM_004999.4|non-overlapping|ATC 0 +  75749345  75749345 0,0,0  1 42, 0,
chr6 109691319 109691346 FIG4|NM_014845.6|non-overlapping|ATG 0 + 109691319 109691319 0,0,0  1 27, 0,
chr6 109691345 109691360 FIG4|NM_014845.6|non-overlapping|ATG 0 + 109691345 109691345 0,0,0  1 15, 0,
chr6 117675579 117675609 NUS1|NM_138459.5|non-overlapping|ATG 0 + 117675579 117675579 0,0,0  1 30, 0,
chr6 118548374 118558833 PLN|NM_002667.5|non-overlapping|ATG 0 + 118548374 118548374 0,0,0  2 18,9, 0,10450,
chr6 121435679 121435697 GJA1|NM_000165.5|non-overlapping|ATT 0 + 121435679 121435679 0,0,0  1 18, 0,
chr6 121435693 121435738 GJA1|NM_000165.5|non-overlapping|GTG 0 + 121435693 121435693 0,0,0  1 45, 0,
chr6 121435805 121446855 GJA1|NM_000165.5|overlapping|GTG 0 + 121435805 121435805 0,0,0  2 27,24, 0,11026,
chr6 133241370 133241382 EYA4|NM_004100.5|non-overlapping|CTG 0 + 133241370 133241370 0,0,0  1 12, 0,
chr6 133241609 133241675 EYA4|NM_004100.5|non-overlapping|ATG 0 + 133241609 133241609 0,0,0  1 66, 0,
chr6 137867388 137867451 TNFAIP3|NM_006290.4|non-overlapping|ATG 0 + 137867388 137867388 0,0,0  1 63, 0,
chr6 148342940 148342967 SASH1|NM_015278.5|non-overlapping|ATG 0 + 148342940 148342940 0,0,0  1 27, 0,
chr6 156777484 156777520 ARID1B|NM_001374820.1|non-overlapping|ATG 0 + 156777484 156777484 0,0,0  1 36, 0,
chr6 170554432 170556904 TBP|NM_003194.5|non-overlapping|CTG 0 + 170554432 170554432 0,0,0  2 31,23, 0,2449,
chr6 170554442 170556923 TBP|NM_003194.5|non-overlapping|GTG 0 + 170554442 170554442 0,0,0  2 21,42, 0,2439,
chr6 170556906 170556960 TBP|NM_003194.5|non-overlapping|ATA 0 + 170556906 170556906 0,0,0  1 54, 0,
chr6 170556951 170556960 TBP|NM_003194.5|non-overlapping|ATG 0 + 170556951 170556951 0,0,0  1 9, 0,
chr7  12211378  12214228 TMEM106B|NM_018374.4|non-overlapping|CTG 0 +  12211378  12211378 0,0,0  2 47,28, 0,2822,
chr7  23105810  23105840 KLHL7|NM_001031710.3|non-overlapping|TTG 0 +  23105810  23105810 0,0,0  1 30, 0,
chr7  23105868  23106129 KLHL7|NM_001031710.3|overlapping|GTG 0 +  23105868  23105868 0,0,0  1 261, 0,
chr7  23105905  23105950 KLHL7|NM_001031710.3|non-overlapping|CTG 0 +  23105905  23105905 0,0,0  1 45, 0,
chr7  36389950  36389959 ANLN|NM_018685.5|non-overlapping|CTG 0 +  36389950  36389950 0,0,0  1 9, 0,
chr7  36389976  36396350 ANLN|NM_018685.5|overlapping|CTG 0 +  36389976  36389976 0,0,0  2 68,85, 0,6289,
chr7  39950141  39950204 CDK13|NM_003718.5|non-overlapping|ACG 0 +  39950141  39950141 0,0,0  1 63, 0,
chr7  39950228  39950237 CDK13|NM_003718.5|non-overlapping|ATG 0 +  39950228  39950228 0,0,0  1 9, 0,
chr7  39950384  39950687 CDK13|NM_003718.5|overlapping|ATA 0 +  39950384  39950384 0,0,0  1 303, 0,
chr7  39950577  39950592 CDK13|NM_003718.5|non-overlapping|ATG 0 +  39950577  39950577 0,0,0  1 15, 0,
chr7  43758693  43771162 BLVRA|NM_000712.4|overlapping|GTG 0 +  43758693  43758693 0,0,0  2 41,25, 0,12444,
chr7  45000264  45000270 CCM2|NM_031443.4|non-overlapping|ATG 0 +  45000264  45000264 0,0,0  1 6, 0,
chr7  55019146  55142435 EGFR|NM_201284.2|overlapping|ACG 0 +  55019146  55019146 0,0,0  2 219,150, 0,123139,
chr7  55019195  55019225 EGFR|NM_201284.2|non-overlapping|ACG 0 +  55019195  55019195 0,0,0  1 30, 0,
chr7  55019221  55142435 EGFR|NM_201284.2|overlapping|CTG 0 +  55019221  55019221 0,0,0  2 144,150, 0,123064,
chr7  55019236  55142435 EGFR|NM_201284.2|overlapping|ATT 0 +  55019236  55019236 0,0,0  2 129,150, 0,123049,
chr7  69598947  69599037 AUTS2|NM_015570.4|non-overlapping|ATG 0 +  69598947  69598947 0,0,0  1 90, 0,
chr7  76302680  76302716 HSPB1|NM_001540.5|overlapping|CTG 0 +  76302680  76302680 0,0,0  1 36, 0,
chr7  76397633  76397651 ZP3|NM_001110354.2|non-overlapping|ATG 0 +  76397633  76397633 0,0,0  1 18, 0,
chr7  76397678  76397702 ZP3|NM_001110354.2|non-overlapping|ATG 0 +  76397678  76397678 0,0,0  1 24, 0,
chr7  91940881  91940941 AKAP9|NM_005751.5|non-overlapping|ATG 0 +  91940881  91940881 0,0,0  1 60, 0,
chr7  91940914  91940941 AKAP9|NM_005751.5|non-overlapping|GTG 0 +  91940914  91940914 0,0,0  1 27, 0,
chr7  94394934  94399065 COL1A2|NM_000089.4|overlapping|CTG 0 +  94394934  94394934 0,0,0  4 167,11,15,17, 0,2813,3447,4114,
chr7  94394948  94394969 COL1A2|NM_000089.4|non-overlapping|ATG 0 +  94394948  94394948 0,0,0  1 21, 0,
chr7  94395014  94395029 COL1A2|NM_000089.4|non-overlapping|ATG 0 +  94395014  94395014 0,0,0  1 15, 0,
chr7 101816020 101816077 CUX1|NM_001202543.2|overlapping|ATG 0 + 101816020 101816020 0,0,0  1 57, 0,
chr7 116672444 116672492 MET|NM_001127500.3|non-overlapping|ATG 0 + 116672444 116672444 0,0,0  1 48, 0,
chr7 116672474 116672492 MET|NM_001127500.3|non-overlapping|ATG 0 + 116672474 116672474 0,0,0  1 18, 0,
chr7 116672544 116699085 MET|NM_001127500.3|non-overlapping|CTG 0 + 116672544 116672544 0,0,0  2 33,15, 0,26526,
chr7 128830430 128830469 FLNC|NM_001458.5|non-overlapping|CTG 0 + 128830430 128830430 0,0,0  1 39, 0,
chr7 157337013 157358589 DNAJB6|NM_058246.4|overlapping|TTG 0 + 157337013 157337013 0,0,0  2 131,43, 0,21533,
chr8   1823969   1857971 ARHGEF10|NM_014629.4|overlapping|ACG 0 +   1823969   1823969 0,0,0  3 144,84,12, 0,19383,33990,
chr8  11494437  11494452 BLK|NM_001715.3|non-overlapping|ATG 0 +  11494437  11494437 0,0,0  1 15, 0,
chr8  11676991  11677249 GATA4|NM_002052.5|non-overlapping|CTG 0 +  11676991  11676991 0,0,0  1 258, 0,
chr8  11700714  11700777 GATA4|NM_002052.5|non-overlapping|ATC 0 +  11700714  11700714 0,0,0  1 63, 0,
chr8  11707906  11708014 GATA4|NM_002052.5|non-overlapping|GTG 0 +  11707906  11707906 0,0,0  1 108, 0,
chr8  11707921  11708014 GATA4|NM_002052.5|non-overlapping|CTG 0 +  11707921  11707921 0,0,0  1 93, 0,
chr8  11708089  11708146 GATA4|NM_002052.5|non-overlapping|TTG 0 +  11708089  11708089 0,0,0  1 57, 0,
chr8  11708136  11708163 GATA4|NM_002052.5|non-overlapping|CTG 0 +  11708136  11708136 0,0,0  1 27, 0,
chr8  11708266  11748928 GATA4|NM_002052.5|overlapping|CTG 0 +  11708266  11708266 0,0,0  2 662,10, 0,40652,
chr8  22367333  22419698 SLC39A14|NM_015359.6|CDS_extension|CTG 0 +  22367333  22367333 0,0,0  9 75,285,187,170,123,189,208,185,147, 0,37362,40976,42612,47446,48435,48739,50317,52218,
chr8  22367369  22419698 SLC39A14|NM_015359.6|CDS_extension|GTG 0 +  22367369  22367369 0,0,0  9 39,285,187,170,123,189,208,185,147, 0,37326,40940,42576,47410,48399,48703,50281,52182,
chr8  42271342  42271393 IKBKB|NM_001556.3|non-overlapping|CTG 0 +  42271342  42271342 0,0,0  1 51, 0,
chr8  60678831  60741340 CHD7|NM_017780.4|non-overlapping|GTG 0 +  60678831  60678831 0,0,0  2 251,82, 0,62427,
chr8  60678858  60741340 CHD7|NM_017780.4|non-overlapping|ATC 0 +  60678858  60678858 0,0,0  2 224,82, 0,62400,
chr8  60678870  60741340 CHD7|NM_017780.4|non-overlapping|TTG 0 +  60678870  60678870 0,0,0  2 212,82, 0,62388,
chr8  60678884  60741282 CHD7|NM_017780.4|non-overlapping|ATT 0 +  60678884  60678884 0,0,0  2 198,24, 0,62374,
chr8  60678933  60741340 CHD7|NM_017780.4|non-overlapping|CTG 0 +  60678933  60678933 0,0,0  2 149,82, 0,62325,
chr8  60741274  60741340 CHD7|NM_001316690.1|non-overlapping|TTG 0 +  60741274  60741274 0,0,0  1 66, 0,
chr8  60741312  60741321 CHD7|NM_001316690.1|non-overlapping|ATG 0 +  60741312  60741312 0,0,0  1 9, 0,
chr8  76681318  76681408 ZFHX4|NM_024721.5|non-overlapping|ATA 0 +  76681318  76681318 0,0,0  1 90, 0,
chr8  76681399  76681408 ZFHX4|NM_024721.5|non-overlapping|ATG 0 +  76681399  76681399 0,0,0  1 9, 0,
chr8  76681518  76681557 ZFHX4|NM_024721.5|non-overlapping|ATG 0 +  76681518  76681518 0,0,0  1 39, 0,
chr8  96261940  96261958 PTDSS1|NM_014754.3|non-overlapping|TTG 0 +  96261940  96261940 0,0,0  1 18, 0,
chr8  96261953  96333566 PTDSS1|NM_014754.3|CDS_extension|ATT 0 +  96261953  96261953 0,0,0 13 266,92,45,125,159,152,142,113,66,100,69,70,110, 0,11345,22155,25068,33144,37740,42086,44490,47603,58292,68259,69072,71503,
chr8  96261964  96262081 PTDSS1|NM_014754.3|overlapping|GTG 0 +  96261964  96261964 0,0,0  1 117, 0,
chr8 101492501 101543243 GRHL2|NM_024915.4|overlapping|ATC 0 + 101492501 101492501 0,0,0  2 288,3, 0,50739,
chr8 101492642 101543243 GRHL2|NM_024915.4|overlapping|ATT 0 + 101492642 101492642 0,0,0  2 147,3, 0,50598,
chr8 101492693 101543243 GRHL2|NM_024915.4|overlapping|CTG 0 + 101492693 101492693 0,0,0  2 96,3, 0,50547,
chr9   2029000   2029111 SMARCA2|NM_003070.5|overlapping|CTG 0 +   2029000   2029000 0,0,0  1 111, 0,
chr9  21802665  21802779 MTAP|NM_002451.4|overlapping|TTG 0 +  21802665  21802665 0,0,0  1 114, 0,
chr9  21802682  21802706 MTAP|NM_002451.4|non-overlapping|CTG 0 +  21802682  21802682 0,0,0  1 24, 0,
chr9  21802684  21815464 MTAP|NM_002451.4|overlapping|GTG 0 +  21802684  21802684 0,0,0  2 97,32, 0,12748,
chr9  21802693  21815464 MTAP|NM_002451.4|overlapping|TTG 0 +  21802693  21802693 0,0,0  2 88,32, 0,12739,
chr9  21802723  21815464 MTAP|NM_002451.4|overlapping|CTG 0 +  21802723  21802723 0,0,0  2 58,32, 0,12709,
chr9  21802729  21815464 MTAP|NM_002451.4|overlapping|ATT 0 +  21802729  21802729 0,0,0  2 52,32, 0,12703,
chr9  74497424  74497526 RORB|NM_006914.4|non-overlapping|ATG 0 +  74497424  74497424 0,0,0  1 102, 0,
chr9  74497443  74497530 RORB|NM_006914.4|non-overlapping|ATG 0 +  74497443  74497443 0,0,0  1 87, 0,
chr9  74497846  74497900 RORB|NM_006914.4|non-overlapping|ATG 0 +  74497846  74497846 0,0,0  1 54, 0,
chr9  99105125  99128905 TGFBR1|NM_004612.4|overlapping|GTG 0 +  99105125  99105125 0,0,0  2 177,51, 0,23729,
chr9  99105145  99105154 TGFBR1|NM_004612.4|non-overlapping|CTG 0 +  99105145  99105145 0,0,0  1 9, 0,
chr9 126613965 126613980 LMX1B|NM_002316.4|non-overlapping|ATG 0 + 126613965 126613965 0,0,0  1 15, 0,
chr9 127451557 127451566 LRSAM1|NM_138361.5|non-overlapping|GTG 0 + 127451557 127451557 0,0,0  1 9, 0,
chr9 127451562 127451673 LRSAM1|NM_138361.5|non-overlapping|CTG 0 + 127451562 127451562 0,0,0  1 111, 0,
chr9 127451622 127451673 LRSAM1|NM_138361.5|non-overlapping|GTG 0 + 127451622 127451622 0,0,0  1 51, 0,
chr9 127451817 127451898 LRSAM1|NM_138361.5|non-overlapping|ATG 0 + 127451817 127451817 0,0,0  1 81, 0,
chr9 127612309 127651615 STXBP1|NM_001032221.6|overlapping|CTG 0 + 127612309 127612309 0,0,0  2 131,13, 0,39293,
chr9 127612315 127651615 STXBP1|NM_001032221.6|overlapping|CTG 0 + 127612315 127612315 0,0,0  2 125,13, 0,39287,
chr9 127612333 127651615 STXBP1|NM_001032221.6|overlapping|CTG 0 + 127612333 127612333 0,0,0  2 107,13, 0,39269,
chr9 127612375 127651615 STXBP1|NM_001032221.6|overlapping|ATC 0 + 127612375 127612375 0,0,0  2 65,13, 0,39227,
chr9 128552604 128566810 SPTAN1|NM_001130438.3|overlapping|GTG 0 + 128552604 128552604 0,0,0  2 92,73, 0,14133,
chr9 128882194 128886105 LRRC8A|NM_019594.4|non-overlapping|ACG 0 + 128882194 128882194 0,0,0  2 56,91, 0,3820,
chr9 130713050 130713083 ABL1|NM_007313.2|non-overlapping|ATG 0 + 130713050 130713050 0,0,0  1 33, 0,
chr9 130713193 130713199 ABL1|NM_007313.2|non-overlapping|ATG 0 + 130713193 130713193 0,0,0  1 6, 0,
chr9 130713529 130713616 ABL1|NM_007313.2|non-overlapping|ACG 0 + 130713529 130713529 0,0,0  1 87, 0,
chr9 130713625 130713724 ABL1|NM_007313.2|non-overlapping|ATG 0 + 130713625 130713625 0,0,0  1 99, 0,
chr9 130713736 130713787 ABL1|NM_007313.2|non-overlapping|ATG 0 + 130713736 130713736 0,0,0  1 51, 0,
chr9 130714172 130714190 ABL1|NM_007313.2|non-overlapping|ATG 0 + 130714172 130714172 0,0,0  1 18, 0,
chr9 134641825 134642071 COL5A1|NM_000093.5|non-overlapping|CTG 0 + 134641825 134641825 0,0,0  1 246, 0,
chr9 134642067 134642079 COL5A1|NM_000093.5|non-overlapping|ATG 0 + 134642067 134642067 0,0,0  1 12, 0,
chr9 137241308 137241743 TUBB4B|NM_006088.6|overlapping|CTG 0 + 137241308 137241308 0,0,0  2 109,23, 0,412,
chr10   8054730   8054745 GATA3|NM_001002295.2|non-overlapping|ATG 0 +   8054730   8054730 0,0,0  1 15, 0,
chr10   8054833   8055450 GATA3|NM_001002295.2|non-overlapping|CTG 0 +   8054833   8054833 0,0,0  2 58,164, 0,453,
chr10   8054873   8055322 GATA3|NM_001002295.2|non-overlapping|CTG 0 +   8054873   8054873 0,0,0  2 18,36, 0,413,
chr10   8055342   8055450 GATA3|NM_001002295.2|non-overlapping|CTG 0 +   8055342   8055342 0,0,0  1 108, 0,
chr10  12069008  12081475 DHTKD1|NM_018706.7|overlapping|ATG 0 +  12069008  12069008 0,0,0  2 179,4, 0,12463,
chr10  13100210  13109154 OPTN|NM_021980.4|overlapping|CTG 0 +  13100210  13100210 0,0,0  2 92,43, 0,8901,
chr10  13100256  13100274 OPTN|NM_021980.4|non-overlapping|ATG 0 +  13100256  13100256 0,0,0  1 18, 0,
chr10  17229313  17229757 VIM|NM_003380.5|overlapping|ACG 0 +  17229313  17229313 0,0,0  1 444, 0,
chr10  17229403  17229757 VIM|NM_003380.5|overlapping|ATC 0 +  17229403  17229403 0,0,0  1 354, 0,
chr10  21534349  21534379 MLLT10|NM_004641.4|non-overlapping|ATG 0 +  21534349  21534349 0,0,0  1 30, 0,
chr10  21534469  21534502 MLLT10|NM_004641.4|non-overlapping|ATG 0 +  21534469  21534469 0,0,0  1 33, 0,
chr10  28533300  28533357 WAC|NM_016628.5|non-overlapping|CTG 0 +  28533300  28533300 0,0,0  1 57, 0,
chr10  28533366  28533444 WAC|NM_016628.5|non-overlapping|CTG 0 +  28533366  28533366 0,0,0  1 78, 0,
chr10  28533406  28533433 WAC|NM_016628.5|non-overlapping|ATG 0 +  28533406  28533406 0,0,0  1 27, 0,
chr10  58512973  58513042 BICC1|NM_001080512.3|non-overlapping|ATG 0 +  58512973  58512973 0,0,0  1 69, 0,
chr10  71396978  71396990 CDH23|NM_022124.6|non-overlapping|ATG 0 +  71396978  71396978 0,0,0  1 12, 0,
chr10  73911203  73912051 PLAU|NM_002658.6|overlapping|CTG 0 +  73911203  73911203 0,0,0  3 15,88,11, 0,321,837,
chr10  73998155  73998323 VCL|NM_014000.3|overlapping|GTG 0 +  73998155  73998155 0,0,0  1 168, 0,
chr10  74826605  74838730 KAT6B|NM_012330.4|non-overlapping|ATG 0 +  74826605  74826605 0,0,0  2 180,48, 0,12077,
chr10  74838718  74838730 KAT6B|NM_012330.4|non-overlapping|ATG 0 +  74838718  74838718 0,0,0  1 12, 0,
chr10  74842620  74842662 KAT6B|NM_012330.4|non-overlapping|ATG 0 +  74842620  74842620 0,0,0  1 42, 0,
chr10  74842709  74842766 KAT6B|NM_012330.4|non-overlapping|ATG 0 +  74842709  74842709 0,0,0  1 57, 0,
chr10  86756632  86756743 BMPR1A|NM_004329.3|non-overlapping|GTG 0 +  86756632  86756632 0,0,0  1 111, 0,
chr10  86756653  86756743 BMPR1A|NM_004329.3|non-overlapping|ATT 0 +  86756653  86756653 0,0,0  1 90, 0,
chr10  87863650  87863665 PTEN|NM_000314.8|non-overlapping|ATG 0 +  87863650  87863650 0,0,0  1 15, 0,
chr10  87863708  87863846 PTEN|NM_000314.8|non-overlapping|ATG 0 +  87863708  87863708 0,0,0  1 138, 0,
chr10  88990830  89003048 FAS|NM_000043.6|overlapping|ACG 0 +  88990830  88990830 0,0,0  2 76,20, 0,12198,
chr10  88990836  89003048 FAS|NM_000043.6|overlapping|TTG 0 +  88990836  88990836 0,0,0  2 70,20, 0,12192,
chr10  88990862  89003080 FAS|NM_000043.6|overlapping|ATT 0 +  88990862  88990862 0,0,0  2 44,52, 0,12166,
chr10  92593140  92593218 KIF11|NM_004523.4|non-overlapping|ATT 0 +  92593140  92593140 0,0,0  1 78, 0,
chr10  92593157  92593445 KIF11|NM_004523.4|overlapping|ATT 0 +  92593157  92593157 0,0,0  1 288, 0,
chr10  92593164  92593218 KIF11|NM_004523.4|non-overlapping|ATT 0 +  92593164  92593164 0,0,0  1 54, 0,
chr10  92593179  92593218 KIF11|NM_004523.4|non-overlapping|CTG 0 +  92593179  92593179 0,0,0  1 39, 0,
chr10  92593235  92593445 KIF11|NM_004523.4|overlapping|CTG 0 +  92593235  92593235 0,0,0  1 210, 0,
chr10  92593259  92593445 KIF11|NM_004523.4|overlapping|ACG 0 +  92593259  92593259 0,0,0  1 186, 0,
chr10  97737149  97737167 ZFYVE27|NM_001002261.4|non-overlapping|GTG 0 +  97737149  97737149 0,0,0  1 18, 0,
chr10  97737186  97737243 ZFYVE27|NM_001002261.4|non-overlapping|CTG 0 +  97737186  97737186 0,0,0  1 57, 0,
chr10  97737205  97759300 ZFYVE27|NM_001002261.4|CDS_extension|CTG 0 +  97737205  97737205 0,0,0 13 116,198,71,187,96,113,140,87,21,145,47,82,65, 0,1271,5888,7523,11063,12268,13125,14170,15651,15832,20059,20436,22030,
chr10  97737262  97759300 ZFYVE27|NM_001002261.4|CDS_extension|GTG 0 +  97737262  97737262 0,0,0 13 59,198,71,187,96,113,140,87,21,145,47,82,65, 0,1214,5831,7466,11006,12211,13068,14113,15594,15775,20002,20379,21973,
chr10 100745881 100745905 PAX2|NM_003988.5|non-overlapping|ATG 0 + 100745881 100745881 0,0,0  1 24, 0,
chr10 100745959 100746013 PAX2|NM_003988.5|non-overlapping|ATG 0 + 100745959 100745959 0,0,0  1 54, 0,
chr10 100987566 100987617 TWNK|NM_021830.5|non-overlapping|ATG 0 + 100987566 100987566 0,0,0  1 51, 0,
chr10 100987689 100987761 TWNK|NM_021830.5|non-overlapping|CTG 0 + 100987689 100987689 0,0,0  1 72, 0,
chr10 100987823 100987892 TWNK|NM_021830.5|non-overlapping|ATG 0 + 100987823 100987823 0,0,0  1 69, 0,
chr10 102395903 102396292 NFKB2|NM_001077494.3|overlapping|CTG 0 + 102395903 102395903 0,0,0  2 77,40, 0,349,
chr10 102395917 102395950 NFKB2|NM_001077494.3|non-overlapping|CTG 0 + 102395917 102395917 0,0,0  1 33, 0,
chr10 102504036 102509272 SUFU|NM_016169.4|overlapping|CTG 0 + 102504036 102504036 0,0,0  2 298,104, 0,5132,
chr10 102918333 102918378 CNNM2|NM_017649.5|non-overlapping|CTG 0 + 102918333 102918333 0,0,0  1 45, 0,
chr10 102918342 102918378 CNNM2|NM_017649.5|non-overlapping|GTG 0 + 102918342 102918342 0,0,0  1 36, 0,
chr10 102918381 102918456 CNNM2|NM_017649.5|non-overlapping|CTG 0 + 102918381 102918381 0,0,0  1 75, 0,
chr10 102918452 102918503 CNNM2|NM_017649.5|overlapping|ATG 0 + 102918452 102918452 0,0,0  1 51, 0,
chr10 110567764 110569005 SMC3|NM_005445.4|overlapping|GTG 0 + 110567764 110567764 0,0,0  2 67,68, 0,1173,
chr10 110919633 110964133 SHOC2|NM_007373.4|non-overlapping|ATG 0 + 110919633 110919633 0,0,0  2 24,9, 0,44491,
chr10 110964171 110964195 SHOC2|NM_007373.4|non-overlapping|ATG 0 + 110964171 110964171 0,0,0  1 24, 0,
chr10 110964185 110964269 SHOC2|NM_007373.4|non-overlapping|ATG 0 + 110964185 110964185 0,0,0  1 84, 0,
chr10 110964220 110964241 SHOC2|NM_007373.4|non-overlapping|ATG 0 + 110964220 110964220 0,0,0  1 21, 0,
chr10 112950331 112950430 TCF7L2|NM_030756.5|non-overlapping|CTG 0 + 112950331 112950331 0,0,0  1 99, 0,
chr10 112950377 112950500 TCF7L2|NM_030756.5|non-overlapping|ACG 0 + 112950377 112950377 0,0,0  1 123, 0,
chr10 112950388 112950430 TCF7L2|NM_030756.5|non-overlapping|CTG 0 + 112950388 112950388 0,0,0  1 42, 0,
chr10 112950508 112950691 TCF7L2|NM_030756.5|non-overlapping|TTG 0 + 112950508 112950508 0,0,0  1 183, 0,
chr10 112950634 112950691 TCF7L2|NM_030756.5|non-overlapping|TTG 0 + 112950634 112950634 0,0,0  1 57, 0,
chr10 119651414 119677282 BAG3|NM_004281.4|CDS_extension|CTG 0 + 119651414 119651414 0,0,0  4 441,327,402,819, 0,18436,20840,25049,
chr10 119651489 119677282 BAG3|NM_004281.4|CDS_extension|ATT 0 + 119651489 119651489 0,0,0  4 366,327,402,819, 0,18361,20765,24974,
chr10 119651547 119651679 BAG3|NM_004281.4|overlapping|GTG 0 + 119651547 119651547 0,0,0  1 132, 0,
chr10 119651571 119651679 BAG3|NM_004281.4|overlapping|ACG 0 + 119651571 119651571 0,0,0  1 108, 0,
chr11   3855751   3855766 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3855751   3855751 0,0,0  1 15, 0,
chr11   3855785   3855977 STIM1|NM_001277961.3|non-overlapping|ACG 0 +   3855785   3855785 0,0,0  1 192, 0,
chr11   3855805   3855961 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3855805   3855805 0,0,0  1 156, 0,
chr11   3855916   3855961 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3855916   3855916 0,0,0  1 45, 0,
chr11   3855973   3856108 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3855973   3855973 0,0,0  1 135, 0,
chr11   3855996   3856266 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3855996   3855996 0,0,0  1 270, 0,
chr11   3856020   3856266 STIM1|NM_001277961.3|non-overlapping|ACG 0 +   3856020   3856020 0,0,0  1 246, 0,
chr11   3856063   3856108 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3856063   3856063 0,0,0  1 45, 0,
chr11   3856095   3856266 STIM1|NM_001277961.3|non-overlapping|TTG 0 +   3856095   3856095 0,0,0  1 171, 0,
chr11   3856206   3856266 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3856206   3856206 0,0,0  1 60, 0,
chr11   3856248   3856266 STIM1|NM_001277961.3|non-overlapping|ATG 0 +   3856248   3856248 0,0,0  1 18, 0,
chr11  12674429  12675501 TEAD1|NM_021961.6|non-overlapping|ATT 0 +  12674429  12674429 0,0,0  2 405,93, 0,979,
chr11  12674483  12675501 TEAD1|NM_021961.6|non-overlapping|CTG 0 +  12674483  12674483 0,0,0  2 351,93, 0,925,
chr11  12674551  12674620 TEAD1|NM_021961.6|non-overlapping|CTG 0 +  12674551  12674551 0,0,0  1 69, 0,
chr11  12674611  12674620 TEAD1|NM_021961.6|non-overlapping|ATG 0 +  12674611  12674611 0,0,0  1 9, 0,
chr11  22193094  22193202 ANO5|NM_213599.3|non-overlapping|CTG 0 +  22193094  22193094 0,0,0  1 108, 0,
chr11  35662981  35663167 TRIM44|NM_017583.6|overlapping|ACG 0 +  35662981  35662981 0,0,0  1 186, 0,
chr11  44095737  44095806 EXT2|NM_207122.2|non-overlapping|CTG 0 +  44095737  44095737 0,0,0  1 69, 0,
chr11  44095743  44095806 EXT2|NM_207122.2|non-overlapping|GTG 0 +  44095743  44095743 0,0,0  1 63, 0,
chr11  44095802  44095814 EXT2|NM_207122.2|non-overlapping|ATG 0 +  44095802  44095802 0,0,0  1 12, 0,
chr11  57761870  57789090 CTNND1|NM_001085458.2|non-overlapping|CTG 0 +  57761870  57761870 0,0,0  2 249,54, 0,27166,
chr11  57761923  57762016 CTNND1|NM_001085458.2|non-overlapping|ATC 0 +  57761923  57761923 0,0,0  1 93, 0,
chr11  57761942  57789090 CTNND1|NM_001085458.2|non-overlapping|GTG 0 +  57761942  57761942 0,0,0  2 177,54, 0,27094,
chr11  57761965  57762016 CTNND1|NM_001085458.2|non-overlapping|CTG 0 +  57761965  57761965 0,0,0  1 51, 0,
chr11  57762020  57789090 CTNND1|NM_001085458.2|non-overlapping|CTG 0 +  57762020  57762020 0,0,0  2 99,54, 0,27016,
chr11  57789075  57789090 CTNND1|NM_001085458.2|non-overlapping|ATG 0 +  57789075  57789075 0,0,0  1 15, 0,
chr11  57789086  57789098 CTNND1|NM_001085458.2|non-overlapping|ATG 0 +  57789086  57789086 0,0,0  1 12, 0,
chr11  59107232  59107259 FAM111B|NM_198947.4|non-overlapping|CTG 0 +  59107232  59107232 0,0,0  1 27, 0,
chr11  59107255  59109603 FAM111B|NM_198947.4|non-overlapping|CTG 0 +  59107255  59107255 0,0,0  3 41,45,64, 0,1412,2284,
chr11  59109579  59109603 FAM111B|NM_198947.4|non-overlapping|ATC 0 +  59109579  59109579 0,0,0  1 24, 0,
chr11  59144816  59145842 FAM111A|NM_022074.4|non-overlapping|CTG 0 +  59144816  59144816 0,0,0  2 80,16, 0,1010,
chr11  59144862  59148816 FAM111A|NM_022074.4|non-overlapping|CTG 0 +  59144862  59144862 0,0,0  3 34,30,20, 0,964,3934,
chr11  59144881  59148802 FAM111A|NM_022074.4|non-overlapping|CTG 0 +  59144881  59144881 0,0,0  3 15,30,6, 0,945,3915,
chr11  61752679  61752706 MYRF|NM_001127392.3|non-overlapping|ATG 0 +  61752679  61752679 0,0,0  1 27, 0,
chr11  66070360  66070468 PACS1|NM_018026.4|non-overlapping|CTG 0 +  66070360  66070360 0,0,0  1 108, 0,
chr11  66070387  66070468 PACS1|NM_018026.4|non-overlapping|CTG 0 +  66070387  66070387 0,0,0  1 81, 0,
chr11  66070432  66070468 PACS1|NM_018026.4|non-overlapping|CTG 0 +  66070432  66070432 0,0,0  1 36, 0,
chr11  66070443  66070479 PACS1|NM_018026.4|non-overlapping|ATC 0 +  66070443  66070443 0,0,0  1 36, 0,
chr11  67483052  67483085 AIP|NM_003977.4|non-overlapping|ATG 0 +  67483052  67483052 0,0,0  1 33, 0,
chr11  68312666  68312681 LRP5|NM_002335.4|non-overlapping|ATG 0 +  68312666  68312666 0,0,0  1 15, 0,
chr11  68684559  68685621 GAL|NM_015973.5|overlapping|ACG 0 +  68684559  68684559 0,0,0  3 173,81,28, 0,364,1034,
chr11  68684608  68684617 GAL|NM_015973.5|non-overlapping|ATG 0 +  68684608  68684608 0,0,0  1 9, 0,
chr11  69641224  69641410 CCND1|NM_053056.3|overlapping|AGG 0 +  69641224  69641224 0,0,0  1 186, 0,
chr11  69641270  69643167 CCND1|NM_053056.3|overlapping|AGG 0 +  69641270  69641270 0,0,0  2 241,137, 0,1760,
chr11  69641291  69643167 CCND1|NM_053056.3|overlapping|CTG 0 +  69641291  69641291 0,0,0  2 220,137, 0,1739,
chr11  86244806  86244845 EED|NM_003797.5|non-overlapping|ATT 0 +  86244806  86244806 0,0,0  1 39, 0,
chr11  86244818  86244845 EED|NM_003797.5|non-overlapping|ACG 0 +  86244818  86244818 0,0,0  1 27, 0,
chr11  86244841  86244907 EED|NM_003797.5|non-overlapping|GTG 0 +  86244841  86244841 0,0,0  1 66, 0,
chr11  86244882  86244921 EED|NM_003797.5|non-overlapping|GTG 0 +  86244882  86244882 0,0,0  1 39, 0,
chr11  86244885  86244921 EED|NM_003797.5|non-overlapping|GTG 0 +  86244885  86244885 0,0,0  1 36, 0,
chr11  86244899  86278525 EED|NM_003797.5|CDS_extension|ATA 0 +  86244899  86244899 0,0,0 12 444,153,93,66,126,82,92,134,106,159,74,127, 0,5396,7248,10322,11487,12615,19272,21183,23556,32080,33018,33499,
chr11  86244909  86244921 EED|NM_003797.5|non-overlapping|CTG 0 +  86244909  86244909 0,0,0  1 12, 0,
chr11  86244925  86245306 EED|NM_003797.5|overlapping|ACG 0 +  86244925  86244925 0,0,0  1 381, 0,
chr11  86245049  86278525 EED|NM_003797.5|CDS_extension|GTG 0 +  86245049  86245049 0,0,0 12 294,153,93,66,126,82,92,134,106,159,74,127, 0,5246,7098,10172,11337,12465,19122,21033,23406,31930,32868,33349,
chr11 102110509 102110800 YAP1|NM_001130145.3|non-overlapping|ATA 0 + 102110509 102110509 0,0,0  1 291, 0,
chr11 102110539 102110800 YAP1|NM_001130145.3|non-overlapping|ACG 0 + 102110539 102110539 0,0,0  1 261, 0,
chr11 102110544 102114154 YAP1|NM_001130145.3|overlapping|CTG 0 + 102110544 102110544 0,0,0  2 625,11, 0,3599,
chr11 102110567 102110720 YAP1|NM_001130145.3|non-overlapping|TTG 0 + 102110567 102110567 0,0,0  1 153, 0,
chr11 102110571 102114154 YAP1|NM_001130145.3|overlapping|AGG 0 + 102110571 102110571 0,0,0  2 598,11, 0,3572,
chr11 102110603 102110720 YAP1|NM_001130145.3|non-overlapping|GTG 0 + 102110603 102110603 0,0,0  1 117, 0,
chr11 102110642 102110720 YAP1|NM_001130145.3|non-overlapping|GTG 0 + 102110642 102110642 0,0,0  1 78, 0,
chr11 102110687 102110720 YAP1|NM_001130145.3|non-overlapping|ATG 0 + 102110687 102110687 0,0,0  1 33, 0,
chr11 102110775 102114154 YAP1|NM_001130145.3|overlapping|GTG 0 + 102110775 102110775 0,0,0  2 394,11, 0,3368,
chr11 102110811 102114154 YAP1|NM_001130145.3|overlapping|CTG 0 + 102110811 102110811 0,0,0  2 358,11, 0,3332,
chr11 108223076 108227595 ATM|NM_000051.4|non-overlapping|GTG 0 + 108223076 108223076 0,0,0  2 110,1, 0,4518,
chr11 108223099 108223159 ATM|NM_000051.4|non-overlapping|GTG 0 + 108223099 108223099 0,0,0  1 60, 0,
chr11 108223137 108223170 ATM|NM_000051.4|non-overlapping|CTG 0 + 108223137 108223137 0,0,0  1 33, 0,
chr11 108223166 108227595 ATM|NM_000051.4|non-overlapping|TTG 0 + 108223166 108223166 0,0,0  2 20,1, 0,4428,
chr11 112086882 112088900 SDHD|NM_003002.4|overlapping|ATG 0 + 112086882 112086882 0,0,0  3 77,117,34, 0,974,1984,
chr11 118572465 118581331 ARCN1|NM_001655.5|overlapping|CTG 0 + 118572465 118572465 0,0,0  2 85,86, 0,8780,
chr11 118572506 118581315 ARCN1|NM_001655.5|overlapping|GTG 0 + 118572506 118572506 0,0,0  2 44,70, 0,8739,
chr11 119084916 119084922 HMBS|NM_000190.4|non-overlapping|CTG 0 + 119084916 119084916 0,0,0  1 6, 0,
chr11 119084923 119088276 HMBS|NM_000190.4|overlapping|ACG 0 + 119084923 119084923 0,0,0  2 143,22, 0,3331,
chr11 119084940 119084997 HMBS|NM_000190.4|non-overlapping|GTG 0 + 119084940 119084940 0,0,0  1 57, 0,
chr11 128694190 128758133 FLI1|NM_002017.5|overlapping|CTG 0 + 128694190 128694190 0,0,0  2 86,19, 0,63924,
chr11 128694217 128758133 FLI1|NM_002017.5|overlapping|ATG 0 + 128694217 128694217 0,0,0  2 59,19, 0,63897,
chr11 128891539 128891548 KCNJ5|NM_000890.5|non-overlapping|ATG 0 + 128891539 128891539 0,0,0  1 9, 0,
chr12    752741    752780 WNK1|NM_018979.4|non-overlapping|TTG 0 +    752741    752741 0,0,0  1 39, 0,
chr12    752943    752958 WNK1|NM_018979.4|non-overlapping|ATG 0 +    752943    752943 0,0,0  1 15, 0,
chr12    753275    753431 WNK1|NM_018979.4|non-overlapping|ATG 0 +    753275    753275 0,0,0  1 156, 0,
chr12   4273921   4273927 CCND2|NM_001759.4|non-overlapping|ATT 0 +   4273921   4273921 0,0,0  1 6, 0,
chr12   6933882   6934005 ATN1|NM_001007026.2|overlapping|CTG 0 +   6933882   6933882 0,0,0  1 123, 0,
chr12   6933978   6934005 ATN1|NM_001007026.2|overlapping|ATG 0 +   6933978   6933978 0,0,0  1 27, 0,
chr12  11649706  11650135 ETV6|NM_001987.5|overlapping|ATG 0 +  11649706  11649706 0,0,0  1 429, 0,
chr12  11650007  11650028 ETV6|NM_001987.5|non-overlapping|ATG 0 +  11650007  11650007 0,0,0  1 21, 0,
chr12  12717398  12717410 CDKN1B|NM_004064.5|non-overlapping|TTG 0 +  12717398  12717398 0,0,0  1 12, 0,
chr12  12717475  12717625 CDKN1B|NM_004064.5|non-overlapping|CTG 0 +  12717475  12717475 0,0,0  1 150, 0,
chr12  12717560  12717767 CDKN1B|NM_004064.5|non-overlapping|TTG 0 +  12717560  12717560 0,0,0  1 207, 0,
chr12  12717621  12717801 CDKN1B|NM_004064.5|non-overlapping|TTG 0 +  12717621  12717621 0,0,0  1 180, 0,
chr12  12717692  12717767 CDKN1B|NM_004064.5|non-overlapping|GTG 0 +  12717692  12717692 0,0,0  1 75, 0,
chr12  45729744  45729765 ARID2|NM_152641.4|non-overlapping|ATG 0 +  45729744  45729744 0,0,0  1 21, 0,
chr12  50504999  50505062 DIP2B|NM_173602.3|non-overlapping|ATG 0 +  50504999  50504999 0,0,0  1 63, 0,
chr12  51591247  51591325 SCN8A|NM_001330260.2|non-overlapping|ATG 0 +  51591247  51591247 0,0,0  1 78, 0,
chr12  51662775  51662790 SCN8A|NM_001330260.2|non-overlapping|CTG 0 +  51662775  51662775 0,0,0  1 15, 0,
chr12  51662809  51663085 SCN8A|NM_001330260.2|overlapping|ATG 0 +  51662809  51662809 0,0,0  1 276, 0,
chr12  56041949  56041973 RPS26|NM_001029.5|non-overlapping|ATG 0 +  56041949  56041949 0,0,0  1 24, 0,
chr12  56041965  56041977 RPS26|NM_001029.5|non-overlapping|ATG 0 +  56041965  56041965 0,0,0  1 12, 0,
chr12  56042015  56042063 RPS26|NM_001029.5|non-overlapping|ATG 0 +  56042015  56042015 0,0,0  1 48, 0,
chr12  56042045  56042063 RPS26|NM_001029.5|non-overlapping|GTG 0 +  56042045  56042045 0,0,0  1 18, 0,
chr12  56042088  56042100 RPS26|NM_001029.5|non-overlapping|GTG 0 +  56042088  56042088 0,0,0  1 12, 0,
chr12  56042107  56042425 RPS26|NM_001029.5|overlapping|ATG 0 +  56042107  56042107 0,0,0  2 62,1, 0,317,
chr12  56080181  56080304 ERBB3|NM_001982.4|overlapping|CTG 0 +  56080181  56080181 0,0,0  1 123, 0,
chr12  56080222  56080246 ERBB3|NM_001982.4|non-overlapping|GTG 0 +  56080222  56080222 0,0,0  1 24, 0,
chr12  56080237  56080246 ERBB3|NM_001982.4|non-overlapping|ATG 0 +  56080237  56080237 0,0,0  1 9, 0,
chr12  64452128  64501381 TBK1|NM_013254.4|CDS_extension|CTG 0 +  64452128  64452128 0,0,0 21 59,118,141,130,182,161,111,180,197,59,92,102,79,122,77,40,102,97,107,72,52, 0,3711,8060,12205,14772,22101,27883,29713,32174,33326,33797,36358,37912,43354,43570,44238,44820,45034,45519,45839,49201,
chr12  64452163  64455860 TBK1|NM_013254.4|non-overlapping|GTG 0 +  64452163  64452163 0,0,0  2 24,21, 0,3676,
chr12  64455851  64455860 TBK1|NM_013254.4|non-overlapping|ATT 0 +  64455851  64455851 0,0,0  1 9, 0,
chr12  78864839  78977816 SYT1|NM_005639.3|non-overlapping|CTG 0 +  78864839  78864839 0,0,0  2 270,18, 0,112959,
chr12  78864947  78977816 SYT1|NM_005639.3|non-overlapping|CTG 0 +  78864947  78864947 0,0,0  2 162,18, 0,112851,
chr12  78865066  78977836 SYT1|NM_005639.3|non-overlapping|CTG 0 +  78865066  78865066 0,0,0  2 43,38, 0,112732,
chr12  78977803  78977836 SYT1|NM_005639.3|non-overlapping|ACG 0 +  78977803  78977803 0,0,0  1 33, 0,
chr12 110281324 110281336 ATP2A2|NM_001681.4|non-overlapping|GTG 0 + 110281324 110281324 0,0,0  1 12, 0,
chr12 110281402 110350305 ATP2A2|NM_001681.4|CDS_extension|GTG 0 + 110281402 110281402 0,0,0 21 505,18,83,105,139,81,86,465,89,103,132,123,219,336,221,203,86,134,118,121,14, 0,1201,1310,10617,15196,41589,44987,46150,51194,51778,52609,57878,58100,59256,60825,61829,63483,63846,64598,64798,68889,
chr12 110281444 110350305 ATP2A2|NM_001681.4|CDS_extension|CTG 0 + 110281444 110281444 0,0,0 21 463,18,83,105,139,81,86,465,89,103,132,123,219,336,221,203,86,134,118,121,14, 0,1159,1268,10575,15154,41547,44945,46108,51152,51736,52567,57836,58058,59214,60783,61787,63441,63804,64556,64756,68847,
chr12 110281444 110346470 ATP2A2|NM_170665.4|CDS_extension|CTG 0 + 110281444 110281444 0,0,0 20 463,18,83,105,139,81,86,465,89,103,132,123,219,336,221,203,86,134,118,270, 0,1159,1268,10575,15154,41547,44945,46108,51152,51736,52567,57836,58058,59214,60783,61787,63441,63804,64556,64756,
chr12 110281575 110281632 ATP2A2|NM_001681.4|non-overlapping|CTG 0 + 110281575 110281575 0,0,0  1 57, 0,
chr12 110281704 110281887 ATP2A2|NM_001681.4|overlapping|GTG 0 + 110281704 110281704 0,0,0  1 183, 0,
chr12 112418992 112419049 PTPN11|NM_002834.5|non-overlapping|CTG 0 + 112418992 112418992 0,0,0  1 57, 0,
chr12 112419043 112419049 PTPN11|NM_002834.5|non-overlapping|ATG 0 + 112419043 112419043 0,0,0  1 6, 0,
chr12 119178973 119178988 HSPB8|NM_014365.3|non-overlapping|CTG 0 + 119178973 119178973 0,0,0  1 15, 0,
chr12 119179021 119179063 HSPB8|NM_014365.3|non-overlapping|CTG 0 + 119179021 119179021 0,0,0  1 42, 0,
chr12 119179095 119179221 HSPB8|NM_014365.3|non-overlapping|CTG 0 + 119179095 119179095 0,0,0  1 126, 0,
chr12 119179199 119179214 HSPB8|NM_014365.3|non-overlapping|ATT 0 + 119179199 119179199 0,0,0  1 15, 0,
chr13  21671167  21671287 FGF9|NM_002010.3|non-overlapping|CTG 0 +  21671167  21671167 0,0,0  1 120, 0,
chr13  21671233  21671287 FGF9|NM_002010.3|non-overlapping|ATG 0 +  21671233  21671233 0,0,0  1 54, 0,
chr13  21671399  21671432 FGF9|NM_002010.3|non-overlapping|ATG 0 +  21671399  21671399 0,0,0  1 33, 0,
chr13  21671530  21671602 FGF9|NM_002010.3|non-overlapping|ATG 0 +  21671530  21671530 0,0,0  1 72, 0,
chr13  21671554  21671602 FGF9|NM_002010.3|non-overlapping|ATG 0 +  21671554  21671554 0,0,0  1 48, 0,
chr13  27621925  27621961 POLR1D|NM_015972.4|non-overlapping|ATG 0 +  27621925  27621925 0,0,0  1 36, 0,
chr13  32315568  32315610 BRCA2|NM_000059.4|non-overlapping|GTG 0 +  32315568  32315568 0,0,0  1 42, 0,
chr13  48233284  48253818 ITM2B|NM_021999.5|overlapping|CTG 0 +  48233284  48233284 0,0,0  2 193,11, 0,20523,
chr13  48233289  48233367 ITM2B|NM_021999.5|overlapping|ATC 0 +  48233289  48233289 0,0,0  1 78, 0,
chr13 110307296 110307515 COL4A2|NM_001846.4|non-overlapping|GTG 0 + 110307296 110307296 0,0,0  1 219, 0,
chr13 110307335 110307515 COL4A2|NM_001846.4|non-overlapping|AGG 0 + 110307335 110307335 0,0,0  1 180, 0,
chr13 110307376 110357488 COL4A2|NM_001846.4|overlapping|ATC 0 + 110307376 110307376 0,0,0  4 152,88,55,17, 0,483,692,50095,
chr13 110307452 110307515 COL4A2|NM_001846.4|non-overlapping|CTG 0 + 110307452 110307452 0,0,0  1 63, 0,
chr13 110307460 110357488 COL4A2|NM_001846.4|overlapping|GTG 0 + 110307460 110307460 0,0,0  4 68,88,55,17, 0,399,608,50011,
chr13 110307491 110307515 COL4A2|NM_001846.4|non-overlapping|ATG 0 + 110307491 110307491 0,0,0  1 24, 0,
chr13 110307511 110357488 COL4A2|NM_001846.4|overlapping|CTG 0 + 110307511 110307511 0,0,0  4 17,88,55,17, 0,348,557,49960,
chr13 114321144 114321183 CHAMP1|NM_001164144.3|non-overlapping|ATA 0 + 114321144 114321144 0,0,0  1 39, 0,
chr13 114321177 114321183 CHAMP1|NM_001164144.3|non-overlapping|ATG 0 + 114321177 114321177 0,0,0  1 6, 0,
chr13 114321184 114321199 CHAMP1|NM_001164144.3|non-overlapping|ATG 0 + 114321184 114321184 0,0,0  1 15, 0,
chr14  36661889  36662917 PAX9|NM_006194.4|overlapping|ATG 0 +  36661889  36661889 0,0,0  2 204,21, 0,1007,
chr14  58638110  58638176 DACT1|NM_016651.6|non-overlapping|ATG 0 +  58638110  58638110 0,0,0  1 66, 0,
chr14  63853030  63909125 SYNE2|NM_182914.3|non-overlapping|CTG 0 +  63853030  63853030 0,0,0  2 113,28, 0,56067,
chr14  63853066  63909125 SYNE2|NM_182914.3|non-overlapping|ATC 0 +  63853066  63853066 0,0,0  2 77,28, 0,56031,
chr14  63909115  63909130 SYNE2|NM_182914.3|non-overlapping|ATG 0 +  63909115  63909115 0,0,0  1 15, 0,
chr14  73136527  73136542 PSEN1|NM_000021.4|non-overlapping|CTG 0 +  73136527  73136527 0,0,0  1 15, 0,
chr14  73147809  73147869 PSEN1|NM_000021.4|non-overlapping|CTG 0 +  73147809  73147809 0,0,0  1 60, 0,
chr14  73147828  73147993 PSEN1|NM_000021.4|non-overlapping|TTG 0 +  73147828  73147828 0,0,0  2 48,27, 0,138,
chr14  73147846  73147993 PSEN1|NM_000021.4|non-overlapping|TTG 0 +  73147846  73147846 0,0,0  2 30,27, 0,120,
chr14  73147851  73147869 PSEN1|NM_000021.4|non-overlapping|CTG 0 +  73147851  73147851 0,0,0  1 18, 0,
chr14  80955538  81062159 TSHR|NM_000369.5|overlapping|GTG 0 +  80955538  80955538 0,0,0  2 312,12, 0,106609,
chr14  80955603  80955612 TSHR|NM_000369.5|non-overlapping|CTG 0 +  80955603  80955603 0,0,0  1 9, 0,
chr14  80955632  80955662 TSHR|NM_000369.5|non-overlapping|ATG 0 +  80955632  80955632 0,0,0  1 30, 0,
chr14  80955650  80955662 TSHR|NM_000369.5|non-overlapping|ATG 0 +  80955650  80955650 0,0,0  1 12, 0,
chr14  90397038  90397074 CALM1|NM_006888.6|non-overlapping|CTG 0 +  90397038  90397038 0,0,0  1 36, 0,
chr14  90397049  90400069 CALM1|NM_006888.6|overlapping|GTG 0 +  90397049  90397049 0,0,0  2 184,5, 0,3015,
chr14  90397058  90400069 CALM1|NM_006888.6|overlapping|GTG 0 +  90397058  90397058 0,0,0  2 175,5, 0,3006,
chr14  90397104  90397125 CALM1|NM_006888.6|non-overlapping|ATA 0 +  90397104  90397104 0,0,0  1 21, 0,
chr14  90397147  90400077 CALM1|NM_006888.6|overlapping|ATC 0 +  90397147  90397147 0,0,0  2 86,13, 0,2917,
chr14  90397180  90400077 CALM1|NM_006888.6|overlapping|CTG 0 +  90397180  90397180 0,0,0  2 53,13, 0,2884,
chr14  99481425  99481458 CCNK|NM_001099402.2|non-overlapping|ATG 0 +  99481425  99481425 0,0,0  1 33, 0,
chr14 100239164 100239494 YY1|NM_003403.5|overlapping|ACG 0 + 100239164 100239164 0,0,0  1 330, 0,
chr14 101964627 101975724 DYNC1H1|NM_001376.5|overlapping|CTG 0 + 101964627 101964627 0,0,0  2 320,13, 0,11084,
chr14 104689639 104703147 INF2|NM_022489.4|overlapping|TTG 0 + 104689639 104689639 0,0,0  3 100,400,43, 0,11717,13465,
chr14 104689678 104703147 INF2|NM_022489.4|overlapping|CTG 0 + 104689678 104689678 0,0,0  3 61,400,43, 0,11678,13426,
chr14 104689693 104703147 INF2|NM_022489.4|overlapping|ACG 0 + 104689693 104689693 0,0,0  3 46,400,43, 0,11663,13411,
chr14 104689720 104703147 INF2|NM_022489.4|overlapping|CTG 0 + 104689720 104689720 0,0,0  3 19,400,43, 0,11636,13384,
chr14 105314817 105314823 PACS2|NM_001100913.3|non-overlapping|ATG 0 + 105314817 105314817 0,0,0  1 6, 0,
chr15  23565709  23565844 MKRN3|NM_005664.4|overlapping|ATT 0 +  23565709  23565709 0,0,0  1 135, 0,
chr15  24974409  24974421 SNRPN|NM_003097.6|non-overlapping|ATC 0 +  24974409  24974409 0,0,0  1 12, 0,
chr15  38252855  38253062 SPRED1|NM_152594.3|non-overlapping|CTG 0 +  38252855  38252855 0,0,0  1 207, 0,
chr15  38252929  38252944 SPRED1|NM_152594.3|non-overlapping|TTG 0 +  38252929  38252929 0,0,0  1 15, 0,
chr15  38253055  38253178 SPRED1|NM_152594.3|non-overlapping|ATG 0 +  38253055  38253055 0,0,0  1 123, 0,
chr15  40161079  40220759 BUB1B|NM_001211.6|CDS_extension|GTG 0 +  40161079  40161079 0,0,0 23 176,144,60,145,197,170,215,92,230,113,116,50,61,106,275,134,141,101,150,143,172,107,196, 0,3973,8982,9457,15397,22634,24085,24471,35465,38535,39164,39851,41325,41509,45104,47557,48555,49030,51419,52252,56416,57376,59484,
chr15  40161101  40161128 BUB1B|NM_001211.6|non-overlapping|GTG 0 +  40161101  40161101 0,0,0  1 27, 0,
chr15  40161141  40165055 BUB1B|NM_001211.6|overlapping|TTG 0 +  40161141  40161141 0,0,0  2 114,3, 0,3911,
chr15  40161164  40161206 BUB1B|NM_001211.6|non-overlapping|CTG 0 +  40161164  40161164 0,0,0  1 42, 0,
chr15  40161194  40161206 BUB1B|NM_001211.6|non-overlapping|ACG 0 +  40161194  40161194 0,0,0  1 12, 0,
chr15  40161213  40165055 BUB1B|NM_001211.6|overlapping|ATG 0 +  40161213  40161213 0,0,0  2 42,3, 0,3839,
chr15  40695187  40695226 RAD51|NM_001164269.2|non-overlapping|CTG 0 +  40695187  40695187 0,0,0  1 39, 0,
chr15  40695231  40698759 RAD51|NM_001164269.2|non-overlapping|GTG 0 +  40695231  40695231 0,0,0  2 90,3, 0,3525,
chr15  40695231  40698781 RAD51|NM_002875.5|overlapping|GTG 0 +  40695231  40695231 0,0,0  2 194,25, 0,3525,
chr15  40695250  40695310 RAD51|NM_001164269.2|non-overlapping|GTG 0 +  40695250  40695250 0,0,0  1 60, 0,
chr15  40695256  40695310 RAD51|NM_001164269.2|non-overlapping|CTG 0 +  40695256  40695256 0,0,0  1 54, 0,
chr15  40695274  40695310 RAD51|NM_001164269.2|non-overlapping|CTG 0 +  40695274  40695274 0,0,0  1 36, 0,
chr15  40695293  40731178 RAD51|NM_001164269.2|CDS_extension|CTG 0 +  40695293  40695293 0,0,0 10 28,89,138,121,92,95,114,130,122,124, 0,3463,5770,6512,13731,23511,33417,34211,34559,35761,
chr15  40695293  40698759 RAD51|NM_002875.5|non-overlapping|CTG 0 +  40695293  40695293 0,0,0  2 132,3, 0,3463,
chr15  40695314  40731178 RAD51|NM_001164269.2|CDS_extension|GTG 0 +  40695314  40695314 0,0,0 10 7,89,138,121,92,95,114,130,122,124, 0,3442,5749,6491,13710,23490,33396,34190,34538,35740,
chr15  40695314  40698759 RAD51|NM_002875.5|non-overlapping|GTG 0 +  40695314  40695314 0,0,0  2 111,3, 0,3442,
chr15  40695375  40698781 RAD51|NM_002875.5|overlapping|GTG 0 +  40695375  40695375 0,0,0  2 50,25, 0,3381,
chr15  56918681  56918693 TCF12|NM_207036.2|non-overlapping|ATG 0 +  56918681  56918681 0,0,0  1 12, 0,
chr15  56918818  56918866 TCF12|NM_207036.2|non-overlapping|CTG 0 +  56918818  56918818 0,0,0  1 48, 0,
chr15  66702347  66702533 SMAD6|NM_005585.5|non-overlapping|CTG 0 +  66702347  66702347 0,0,0  1 186, 0,
chr15  66702485  66702533 SMAD6|NM_005585.5|non-overlapping|GTG 0 +  66702485  66702485 0,0,0  1 48, 0,
chr15  66702574  66702583 SMAD6|NM_005585.5|non-overlapping|ATG 0 +  66702574  66702574 0,0,0  1 9, 0,
chr15  66702657  66702801 SMAD6|NM_005585.5|non-overlapping|ATG 0 +  66702657  66702657 0,0,0  1 144, 0,
chr15  66702882  66702906 SMAD6|NM_005585.5|non-overlapping|ATG 0 +  66702882  66702882 0,0,0  1 24, 0,
chr15  66702920  66702986 SMAD6|NM_005585.5|non-overlapping|ATG 0 +  66702920  66702920 0,0,0  1 66, 0,
chr15  66703084  66703195 SMAD6|NM_005585.5|non-overlapping|ATG 0 +  66703084  66703084 0,0,0  1 111, 0,
chr15  67065846  67066191 SMAD3|NM_005902.4|overlapping|TTG 0 +  67065846  67065846 0,0,0  1 345, 0,
chr15  67065897  67066191 SMAD3|NM_005902.4|overlapping|CTG 0 +  67065897  67065897 0,0,0  1 294, 0,
chr15  67065941  67066037 SMAD3|NM_005902.4|non-overlapping|GTG 0 +  67065941  67065941 0,0,0  1 96, 0,
chr15  67065986  67066037 SMAD3|NM_005902.4|non-overlapping|CTG 0 +  67065986  67065986 0,0,0  1 51, 0,
chr15  67066045  67165017 SMAD3|NM_005902.4|overlapping|TTG 0 +  67066045  67066045 0,0,0  2 315,123, 0,98849,
chr15  67066081  67165017 SMAD3|NM_005902.4|overlapping|CTG 0 +  67066081  67066081 0,0,0  2 279,123, 0,98813,
chr15  73926512  73926518 LOXL1|NM_005576.4|non-overlapping|ATG 0 +  73926512  73926512 0,0,0  1 6, 0,
chr15  73926613  73926670 LOXL1|NM_005576.4|non-overlapping|ATG 0 +  73926613  73926613 0,0,0  1 57, 0,
chr15  76995191  76995290 PSTPIP1|NM_003978.5|non-overlapping|CTG 0 +  76995191  76995191 0,0,0  1 99, 0,
chr15  76995203  76995290 PSTPIP1|NM_003978.5|non-overlapping|CTG 0 +  76995203  76995203 0,0,0  1 87, 0,
chr15  76995227  76995290 PSTPIP1|NM_003978.5|non-overlapping|CTG 0 +  76995227  76995227 0,0,0  1 63, 0,
chr15  76995382  76995436 PSTPIP1|NM_003978.5|non-overlapping|TTG 0 +  76995382  76995382 0,0,0  1 54, 0,
chr15  76995421  76995436 PSTPIP1|NM_003978.5|non-overlapping|GTG 0 +  76995421  76995421 0,0,0  1 15, 0,
chr15  92900345  92900363 CHD2|NM_001271.4|non-overlapping|ATG 0 +  92900345  92900345 0,0,0  1 18, 0,
chr15  92900470  92900515 CHD2|NM_001271.4|non-overlapping|CTG 0 +  92900470  92900470 0,0,0  1 45, 0,
chr15  92900493  92900559 CHD2|NM_001271.4|non-overlapping|TTG 0 +  92900493  92900493 0,0,0  1 66, 0,
chr15  92900555  92900627 CHD2|NM_001271.4|non-overlapping|CTG 0 +  92900555  92900555 0,0,0  1 72, 0,
chr15  92900594  92900627 CHD2|NM_001271.4|non-overlapping|ATG 0 +  92900594  92900594 0,0,0  1 33, 0,
chr15  96330778  96330970 NR2F2|NM_021005.4|non-overlapping|TTG 0 +  96330778  96330778 0,0,0  1 192, 0,
chr15  96330862  96330970 NR2F2|NM_021005.4|non-overlapping|TTG 0 +  96330862  96330862 0,0,0  1 108, 0,
chr15  96330908  96331022 NR2F2|NM_021005.4|non-overlapping|ATT 0 +  96330908  96330908 0,0,0  1 114, 0,
chr15  96330951  96330963 NR2F2|NM_021005.4|non-overlapping|ATG 0 +  96330951  96330951 0,0,0  1 12, 0,
chr15  96331032  96331125 NR2F2|NM_021005.4|non-overlapping|ATG 0 +  96331032  96331032 0,0,0  1 93, 0,
chr15  96331310  96331352 NR2F2|NM_021005.4|non-overlapping|ACG 0 +  96331310  96331310 0,0,0  1 42, 0,
chr15  96331345  96331495 NR2F2|NM_021005.4|non-overlapping|ATG 0 +  96331345  96331345 0,0,0  1 150, 0,
chr15  96331474  96331495 NR2F2|NM_021005.4|non-overlapping|ATG 0 +  96331474  96331474 0,0,0  1 21, 0,
chr15  96331487  96331631 NR2F2|NM_021005.4|non-overlapping|ATG 0 +  96331487  96331487 0,0,0  1 144, 0,
chr15  98648962  98649004 IGF1R|NM_000875.5|non-overlapping|CTG 0 +  98648962  98648962 0,0,0  1 42, 0,
chr15  98649066  98649369 IGF1R|NM_000875.5|non-overlapping|TTG 0 +  98649066  98649066 0,0,0  1 303, 0,
chr15  98649122  98649551 IGF1R|NM_000875.5|non-overlapping|ATC 0 +  98649122  98649122 0,0,0  1 429, 0,
chr15  98649132  98649369 IGF1R|NM_000875.5|non-overlapping|CTG 0 +  98649132  98649132 0,0,0  1 237, 0,
chr15  98649199  98649217 IGF1R|NM_000875.5|non-overlapping|TTG 0 +  98649199  98649199 0,0,0  1 18, 0,
chr15  98649230  98649551 IGF1R|NM_000875.5|non-overlapping|TTG 0 +  98649230  98649230 0,0,0  1 321, 0,
chr15  98649282  98649369 IGF1R|NM_000875.5|non-overlapping|ATG 0 +  98649282  98649282 0,0,0  1 87, 0,
chr15  99565995  99566019 MEF2A|NM_005587.4|non-overlapping|ATG 0 +  99565995  99565995 0,0,0  1 24, 0,
chr15  99633041  99633050 MEF2A|NM_005587.4|non-overlapping|ATG 0 +  99633041  99633041 0,0,0  1 9, 0,
chr16    680469    680529 STUB1|NM_005861.4|overlapping|CTG 0 +    680469    680469 0,0,0  1 60, 0,
chr16   2155812   2163905 TRAF7|NM_032271.3|non-overlapping|ATG 0 +   2155812   2155812 0,0,0  2 46,23, 0,8070,
chr16   2163905   2163917 TRAF7|NM_032271.3|non-overlapping|ATG 0 +   2163905   2163905 0,0,0  1 12, 0,
chr16   2496041   2496092 TBC1D24|NM_001199107.2|non-overlapping|ATG 0 +   2496041   2496041 0,0,0  1 51, 0,
chr16  27314001  27330073 IL4R|NM_000418.4|non-overlapping|ATG 0 +  27314001  27314001 0,0,0  2 19,8, 0,16064,
chr16  27402443  27402455 IL21R|NM_181079.5|non-overlapping|ATG 0 +  27402443  27402443 0,0,0  1 12, 0,
chr16  27402586  27402598 IL21R|NM_181079.5|non-overlapping|ATG 0 +  27402586  27402586 0,0,0  1 12, 0,
chr16  30699196  30699226 SRCAP|NM_006662.3|non-overlapping|ATG 0 +  30699196  30699196 0,0,0  1 30, 0,
chr16  30700708  30704082 SRCAP|NM_006662.3|overlapping|ATG 0 +  30700708  30700708 0,0,0  2 170,19, 0,3355,
chr16  30700726  30704082 SRCAP|NM_006662.3|overlapping|ATG 0 +  30700726  30700726 0,0,0  2 152,19, 0,3337,
chr16  30700796  30704131 SRCAP|NM_006662.3|overlapping|ATC 0 +  30700796  30700796 0,0,0  2 82,68, 0,3267,
chr16  31180171  31182599 FUS|NM_004960.4|overlapping|TTG 0 +  31180171  31180171 0,0,0  3 56,25,87, 0,2226,2341,
chr16  50742783  50742819 CYLD|NM_015247.3|non-overlapping|ATG 0 +  50742783  50742783 0,0,0  1 36, 0,
chr16  50749576  50749672 CYLD|NM_015247.3|non-overlapping|ATG 0 +  50749576  50749576 0,0,0  1 96, 0,
chr16  56191515  56192127 GNAO1|NM_138736.3|non-overlapping|CTG 0 +  56191515  56191515 0,0,0  1 612, 0,
chr16  56191568  56191607 GNAO1|NM_138736.3|non-overlapping|ATG 0 +  56191568  56191568 0,0,0  1 39, 0,
chr16  56191702  56191717 GNAO1|NM_138736.3|non-overlapping|ATG 0 +  56191702  56191702 0,0,0  1 15, 0,
chr16  56191907  56192141 GNAO1|NM_138736.3|non-overlapping|GTG 0 +  56191907  56191907 0,0,0  1 234, 0,
chr16  56192044  56192059 GNAO1|NM_138736.3|non-overlapping|CTG 0 +  56192044  56192044 0,0,0  1 15, 0,
chr16  56192080  56192251 GNAO1|NM_138736.3|overlapping|CTG 0 +  56192080  56192080 0,0,0  1 171, 0,
chr16  67562588  67571152 CTCF|NM_006565.4|non-overlapping|GTG 0 +  67562588  67562588 0,0,0  2 136,5, 0,8559,
chr16  67562598  67571246 CTCF|NM_006565.4|non-overlapping|CTG 0 +  67562598  67562598 0,0,0  2 126,99, 0,8549,
chr16  67562627  67571152 CTCF|NM_006565.4|non-overlapping|GTG 0 +  67562627  67562627 0,0,0  2 97,5, 0,8520,
chr16  67562679  67571246 CTCF|NM_006565.4|non-overlapping|GTG 0 +  67562679  67562679 0,0,0  2 45,99, 0,8468,
chr16  67571178  67571187 CTCF|NM_006565.4|non-overlapping|ATG 0 +  67571178  67571178 0,0,0  1 9, 0,
chr16  68737315  68737321 CDH1|NM_004360.5|non-overlapping|CTG 0 +  68737315  68737315 0,0,0  1 6, 0,
chr16  68737323  68801672 CDH1|NM_004360.5|overlapping|TTG 0 +  68737323  68737323 0,0,0  3 140,115,3, 0,973,64346,
chr16  68737386  68801672 CDH1|NM_004360.5|overlapping|CTG 0 +  68737386  68737386 0,0,0  3 77,115,3, 0,910,64283,
chr16  81779329  81786030 PLCG2|NM_002661.5|overlapping|CTG 0 +  81779329  81779329 0,0,0  2 95,88, 0,6613,
chr16  81779355  81786011 PLCG2|NM_002661.5|overlapping|CTG 0 +  81779355  81779355 0,0,0  2 69,69, 0,6587,
chr17   2593730   2593742 PAFAH1B1|NM_000430.4|non-overlapping|ACG 0 +   2593730   2593730 0,0,0  1 12, 0,
chr17   2593805   2593964 PAFAH1B1|NM_000430.4|non-overlapping|TTG 0 +   2593805   2593805 0,0,0  1 159, 0,
chr17   2593954   2638121 PAFAH1B1|NM_000430.4|non-overlapping|ATG 0 +   2593954   2593954 0,0,0  2 52,23, 0,44144,
chr17  17681553  17793103 RAI1|NM_030665.4|overlapping|CTG 0 +  17681553  17681553 0,0,0  3 240,132,171, 0,42474,111379,
chr17  17681567  17681636 RAI1|NM_030665.4|non-overlapping|ACG 0 +  17681567  17681567 0,0,0  1 69, 0,
chr17  17681620  17681779 RAI1|NM_030665.4|non-overlapping|CTG 0 +  17681620  17681620 0,0,0  1 159, 0,
chr17  17681719  17681779 RAI1|NM_030665.4|non-overlapping|ATG 0 +  17681719  17681719 0,0,0  1 60, 0,
chr17  31094993  31095038 NF1|NM_001128147.3|non-overlapping|ATG 0 +  31094993  31094993 0,0,0  1 45, 0,
chr17  32928212  32928236 TMEM98|NM_015544.3|non-overlapping|ATG 0 +  32928212  32928212 0,0,0  1 24, 0,
chr17  32931483  32931498 TMEM98|NM_015544.3|non-overlapping|ATG 0 +  32931483  32931483 0,0,0  1 15, 0,
chr17  32931492  32931498 TMEM98|NM_015544.3|non-overlapping|ATG 0 +  32931492  32931492 0,0,0  1 6, 0,
chr17  34255309  34255327 CCL2|NM_002982.4|non-overlapping|ATC 0 +  34255309  34255309 0,0,0  1 18, 0,
chr17  34255323  34255353 CCL2|NM_002982.4|overlapping|CTG 0 +  34255323  34255323 0,0,0  1 30, 0,
chr17  40063020  40063047 THRA|NM_199334.5|non-overlapping|ATG 0 +  40063020  40063020 0,0,0  1 27, 0,
chr17  40074289  40077520 THRA|NM_199334.5|overlapping|CTG 0 +  40074289  40074289 0,0,0  3 252,68,13, 0,2581,3218,
chr17  40074363  40074381 THRA|NM_199334.5|non-overlapping|ATG 0 +  40074363  40074363 0,0,0  1 18, 0,
chr17  40074457  40077520 THRA|NM_199334.5|overlapping|CTG 0 +  40074457  40074457 0,0,0  3 84,68,13, 0,2413,3050,
chr17  40074473  40074488 THRA|NM_199334.5|non-overlapping|ATG 0 +  40074473  40074473 0,0,0  1 15, 0,
chr17  44557566  44557902 FZD2|NM_001466.4|overlapping|TTG 0 +  44557566  44557566 0,0,0  1 336, 0,
chr17  44557633  44558032 FZD2|NM_001466.4|overlapping|TTG 0 +  44557633  44557633 0,0,0  1 399, 0,
chr17  45894597  45962324 MAPT|NM_005910.6|non-overlapping|CTG 0 +  45894597  45894597 0,0,0  2 89,4, 0,67723,
chr17  45894614  45962368 MAPT|NM_005910.6|overlapping|CTG 0 +  45894614  45894614 0,0,0  2 72,48, 0,67706,
chr17  45894650  45962368 MAPT|NM_005910.6|overlapping|CTG 0 +  45894650  45894650 0,0,0  2 36,48, 0,67670,
chr17  51153593  51153650 NME1|NM_000269.3|non-overlapping|ACG 0 +  51153593  51153593 0,0,0  1 57, 0,
chr17  56593966  56593996 NOG|NM_005450.6|non-overlapping|ATG 0 +  56593966  56593966 0,0,0  1 30, 0,
chr17  59619931  59620117 CLTC|NM_004859.4|non-overlapping|ATT 0 +  59619931  59619931 0,0,0  1 186, 0,
chr17  59619950  59644337 CLTC|NM_004859.4|overlapping|CTG 0 +  59619950  59619950 0,0,0  2 223,62, 0,24325,
chr17  59619999  59620026 CLTC|NM_004859.4|non-overlapping|CTG 0 +  59619999  59619999 0,0,0  1 27, 0,
chr17  59620019  59644337 CLTC|NM_004859.4|overlapping|CTG 0 +  59620019  59620019 0,0,0  2 154,62, 0,24256,
chr17  59620022  59644337 CLTC|NM_004859.4|overlapping|CTG 0 +  59620022  59620022 0,0,0  2 151,62, 0,24253,
chr17  59620061  59644337 CLTC|NM_004859.4|overlapping|TTG 0 +  59620061  59620061 0,0,0  2 112,62, 0,24214,
chr17  59620081  59620117 CLTC|NM_004859.4|non-overlapping|CTG 0 +  59620081  59620081 0,0,0  1 36, 0,
chr17  60600379  60600442 PPM1D|NM_003620.4|overlapping|CTG 0 +  60600379  60600379 0,0,0  1 63, 0,
chr17  61400168  61400180 TBX2|NM_005994.4|overlapping|ATG 0 +  61400168  61400168 0,0,0  1 12, 0,
chr17  67825530  67825578 BPTF|NM_004459.7|non-overlapping|ATG 0 +  67825530  67825530 0,0,0  1 48, 0,
chr17  68512433  68515428 PRKAR1A|NM_002734.5|overlapping|CTG 0 +  68512433  68512433 0,0,0  2 115,35, 0,2960,
chr17  68512457  68515428 PRKAR1A|NM_002734.5|overlapping|GTG 0 +  68512457  68512457 0,0,0  2 91,35, 0,2936,
chr17  72121044  72121395 SOX9|NM_000346.4|overlapping|CTG 0 +  72121044  72121044 0,0,0  1 351, 0,
chr17  72121060  72121210 SOX9|NM_000346.4|non-overlapping|GTG 0 +  72121060  72121060 0,0,0  1 150, 0,
chr17  72121124  72121250 SOX9|NM_000346.4|non-overlapping|GTG 0 +  72121124  72121124 0,0,0  1 126, 0,
chr17  72121128  72121395 SOX9|NM_000346.4|overlapping|AAG 0 +  72121128  72121128 0,0,0  1 267, 0,
chr17  72121211  72121250 SOX9|NM_000346.4|non-overlapping|CTG 0 +  72121211  72121211 0,0,0  1 39, 0,
chr17  74748764  74748830 SLC9A3R1|NM_004252.5|non-overlapping|CTG 0 +  74748764  74748764 0,0,0  1 66, 0,
chr17  74748826  74748850 SLC9A3R1|NM_004252.5|overlapping|CTG 0 +  74748826  74748826 0,0,0  1 24, 0,
chr17  75721506  75724755 ITGB4|NM_001005731.3|overlapping|CTG 0 +  75721506  75721506 0,0,0  2 106,62, 0,3187,
chr17  75721574  75757555 ITGB4|NM_001005731.3|CDS_extension|ACG 0 +  75721574  75721574 0,0,0 39 38,89,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,104,59,24,149,180,149,205,158,181,138,183,132,240,150,189,156,165,111,140, 0,3119,5620,5829,6076,6802,7690,8666,9300,9671,10237,10588,11915,14476,14713,14990,15747,15963,18097,18305,18783,19218,19407,20766,21007,22138,27266,28536,29105,29399,30599,30871,33001,34126,34854,35129,35368,35625,35841,
chr18   2655900   2656125 SMCHD1|NM_015295.3|overlapping|GTG 0 +   2655900   2655900 0,0,0  1 225, 0,
chr18   2655947   2666932 SMCHD1|NM_015295.3|overlapping|CTG 0 +   2655947   2655947 0,0,0  3 314,76,63, 0,10209,10922,
chr18   2656026   2656125 SMCHD1|NM_015295.3|overlapping|CTG 0 +   2656026   2656026 0,0,0  1 99, 0,
chr18  11689339  11689366 GNAL|NM_182978.4|non-overlapping|ATG 0 +  11689339  11689339 0,0,0  1 27, 0,
chr18  11689346  11689484 GNAL|NM_182978.4|non-overlapping|ATG 0 +  11689346  11689346 0,0,0  1 138, 0,
chr18  21242316  21366060 GREB1L|NM_001142966.3|non-overlapping|CTG 0 +  21242316  21242316 0,0,0  2 77,34, 0,123710,
chr18  21366054  21366060 GREB1L|NM_001142966.3|non-overlapping|ATC 0 +  21366054  21366054 0,0,0  1 6, 0,
chr18  21366099  21366123 GREB1L|NM_001142966.3|non-overlapping|ATG 0 +  21366099  21366099 0,0,0  1 24, 0,
chr18  22169605  22171114 GATA6|NM_005257.6|non-overlapping|CTG 0 +  22169605  22169605 0,0,0  2 77,7, 0,1502,
chr18  22169662  22171114 GATA6|NM_005257.6|non-overlapping|ATG 0 +  22169662  22169662 0,0,0  2 20,7, 0,1445,
chr18  34493361  34493412 DTNA|NM_001392.5|non-overlapping|ATG 0 +  34493361  34493361 0,0,0  1 51, 0,
chr18  34493457  34493472 DTNA|NM_001392.5|non-overlapping|ATG 0 +  34493457  34493457 0,0,0  1 15, 0,
chr18  34593410  34593470 DTNA|NM_001198938.2|non-overlapping|ATG 0 +  34593410  34593410 0,0,0  1 60, 0,
chr18  34679492  34679516 DTNA|NM_001198938.2|non-overlapping|ATG 0 +  34679492  34679492 0,0,0  1 24, 0,
chr18  35041513  35070232 MAPRE2|NM_014268.4|overlapping|TTG 0 +  35041513  35041513 0,0,0  2 148,38, 0,28681,
chr18  51030235  51030280 SMAD4|NM_005359.6|non-overlapping|TTG 0 +  51030235  51030235 0,0,0  1 45, 0,
chr18  51030481  51047023 SMAD4|NM_005359.6|non-overlapping|CTG 0 +  51030481  51030481 0,0,0  2 142,104, 0,16438,
chr18  51030496  51047023 SMAD4|NM_005359.6|non-overlapping|CTG 0 +  51030496  51030496 0,0,0  2 127,104, 0,16423,
chr18  51046933  51047023 SMAD4|NM_005359.6|non-overlapping|ATG 0 +  51046933  51046933 0,0,0  1 90, 0,
chr18  58044364  58044388 NEDD4L|NM_015277.6|non-overlapping|CTG 0 +  58044364  58044364 0,0,0  1 24, 0,
chr18  58044400  58165812 NEDD4L|NM_015277.6|overlapping|CTG 0 +  58044400  58044400 0,0,0  2 308,25, 0,121387,
chr18  58044443  58044557 NEDD4L|NM_015277.6|non-overlapping|CTG 0 +  58044443  58044443 0,0,0  1 114, 0,
chr18  58044472  58165812 NEDD4L|NM_015277.6|overlapping|GTG 0 +  58044472  58044472 0,0,0  2 236,25, 0,121315,
chr18  58044576  58396269 NEDD4L|NM_015277.6|CDS_extension|CTG 0 +  58044576  58044576 0,0,0 30 132,74,82,39,54,51,62,103,167,133,177,75,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,103, 0,121211,200850,204322,207424,271405,277848,278655,280419,284418,286161,289241,296461,297101,298329,304960,306414,312617,319691,321422,323169,325820,328597,338669,340949,342862,344508,346069,346910,351590,
chr18  58044622  58165812 NEDD4L|NM_015277.6|overlapping|CTG 0 +  58044622  58044622 0,0,0  2 86,25, 0,121165,
chr18  75210938  75211181 TSHZ1|NM_005786.6|non-overlapping|ATG 0 +  75210938  75210938 0,0,0  1 243, 0,
chr18  75211080  75211095 TSHZ1|NM_005786.6|non-overlapping|ATG 0 +  75211080  75211080 0,0,0  1 15, 0,
chr19    917364    917400 KISS1R|NM_032551.5|non-overlapping|CTG 0 +    917364    917364 0,0,0  1 36, 0,
chr19    917396    919946 KISS1R|NM_032551.5|overlapping|CTG 0 +    917396    917396 0,0,0  4 350,125,136,73, 0,1147,2093,2477,
chr19   1206473   1206530 STK11|NM_000455.5|non-overlapping|ATG 0 +   1206473   1206473 0,0,0  1 57, 0,
chr19   3094374   3094692 GNA11|NM_002067.5|overlapping|CTG 0 +   3094374   3094374 0,0,0  1 318, 0,
chr19   3094456   3121179 GNA11|NM_002067.5|CDS_extension|CTG 0 +   3094456   3094456 0,0,0  7 331,185,155,129,130,154,191, 0,15692,18873,20487,24467,24749,26532,
chr19   3094536   3094692 GNA11|NM_002067.5|overlapping|GTG 0 +   3094536   3094536 0,0,0  1 156, 0,
chr19   8364211   8364325 ANGPTL4|NM_139314.3|overlapping|CTG 0 +   8364211   8364211 0,0,0  1 114, 0,
chr19   8364263   8364317 ANGPTL4|NM_139314.3|non-overlapping|CTG 0 +   8364263   8364263 0,0,0  1 54, 0,
chr19   8364274   8364325 ANGPTL4|NM_139314.3|overlapping|ACG 0 +   8364274   8364274 0,0,0  1 51, 0,
chr19  10718087  10718105 DNM2|NM_001005361.3|non-overlapping|ATG 0 +  10718087  10718087 0,0,0  1 18, 0,
chr19  10718165  10718270 DNM2|NM_001005361.3|overlapping|ACG 0 +  10718165  10718165 0,0,0  1 105, 0,
chr19  10961084  10984243 SMARCA4|NM_001128849.3|overlapping|GTG 0 +  10961084  10961084 0,0,0  2 90,123, 0,23036,
chr19  10961155  10984149 SMARCA4|NM_001128849.3|non-overlapping|ACG 0 +  10961155  10961155 0,0,0  2 19,29, 0,22965,
chr19  11435677  11436071 PRKCSH|NM_002743.3|non-overlapping|GTG 0 +  11435677  11435677 0,0,0  2 29,31, 0,363,
chr19  11436065  11436071 PRKCSH|NM_002743.3|non-overlapping|CTG 0 +  11436065  11436065 0,0,0  1 6, 0,
chr19  12838553  12838580 MAST1|NM_014975.3|overlapping|ATG 0 +  12838553  12838553 0,0,0  1 27, 0,
chr19  13118289  13118322 NACC1|NM_052876.4|non-overlapping|ATG 0 +  13118289  13118289 0,0,0  1 33, 0,
chr19  18155480  18155573 PIK3R2|NM_005027.4|non-overlapping|ATG 0 +  18155480  18155480 0,0,0  1 93, 0,
chr19  35745654  35745872 PSENEN|NM_172341.4|non-overlapping|CTG 0 +  35745654  35745654 0,0,0  2 46,38, 0,180,
chr19  35745687  35745872 PSENEN|NM_172341.4|non-overlapping|GTG 0 +  35745687  35745687 0,0,0  2 13,38, 0,147,
chr19  40365872  40366432 PLD3|NM_012268.4|non-overlapping|CTG 0 +  40365872  40365872 0,0,0  2 58,14, 0,546,
chr19  40366428  40366494 PLD3|NM_012268.4|overlapping|CTG 0 +  40366428  40366428 0,0,0  1 66, 0,
chr19  40366449  40366494 PLD3|NM_012268.4|overlapping|CTG 0 +  40366449  40366449 0,0,0  1 45, 0,
chr19  48965365  48965792 FTL|NM_000146.4|overlapping|ATC 0 +  48965365  48965365 0,0,0  2 244,23, 0,404,
chr19  48965415  48965487 FTL|NM_000146.4|non-overlapping|TTG 0 +  48965415  48965415 0,0,0  1 72, 0,
chr19  50384364  50384385 POLD1|NM_002691.4|non-overlapping|GTG 0 +  50384364  50384364 0,0,0  1 21, 0,
chr20   6767783   6768017 BMP2|NM_001200.4|non-overlapping|CTG 0 +   6767783   6767783 0,0,0  1 234, 0,
chr20   6767856   6768081 BMP2|NM_001200.4|non-overlapping|GTG 0 +   6767856   6767856 0,0,0  1 225, 0,
chr20   6767907   6768081 BMP2|NM_001200.4|non-overlapping|CTG 0 +   6767907   6767907 0,0,0  1 174, 0,
chr20   6768024   6768081 BMP2|NM_001200.4|non-overlapping|ATG 0 +   6768024   6768024 0,0,0  1 57, 0,
chr20   6768191   6768278 BMP2|NM_001200.4|non-overlapping|ATG 0 +   6768191   6768191 0,0,0  1 87, 0,
chr20   6768827   6768854 BMP2|NM_001200.4|non-overlapping|ATG 0 +   6768827   6768827 0,0,0  1 27, 0,
chr20  10218836  10218863 SNAP25|NM_130811.4|non-overlapping|ATG 0 +  10218836  10218836 0,0,0  1 27, 0,
chr20  18507948  18507972 SEC23B|NM_006363.6|non-overlapping|GTG 0 +  18507948  18507948 0,0,0  1 24, 0,
chr20  32358350  32358509 ASXL1|NM_015338.6|non-overlapping|ACG 0 +  32358350  32358350 0,0,0  1 159, 0,
chr20  32358359  32358509 ASXL1|NM_015338.6|non-overlapping|ACG 0 +  32358359  32358359 0,0,0  1 150, 0,
chr20  32358420  32358468 ASXL1|NM_015338.6|non-overlapping|CTG 0 +  32358420  32358420 0,0,0  1 48, 0,
chr20  32358485  32358509 ASXL1|NM_015338.6|non-overlapping|ATG 0 +  32358485  32358485 0,0,0  1 24, 0,
chr20  36154779  36173781 EPB41L1|NM_012156.2|overlapping|CTG 0 +  36154779  36154779 0,0,0  2 117,18, 0,18984,
chr20  36154876  36173806 EPB41L1|NM_012156.2|overlapping|ATG 0 +  36154876  36154876 0,0,0  2 20,43, 0,18887,
chr20  37365247  37365271 SRC|NM_005417.5|non-overlapping|ATG 0 +  37365247  37365247 0,0,0  1 24, 0,
chr20  50510382  50510415 PTPN1|NM_002827.4|non-overlapping|ATG 0 +  50510382  50510382 0,0,0  1 33, 0,
chr20  50510460  50561376 PTPN1|NM_002827.4|overlapping|ACG 0 +  50510460  50510460 0,0,0  2 130,14, 0,50902,
chr20  50510487  50561376 PTPN1|NM_002827.4|overlapping|GTG 0 +  50510487  50510487 0,0,0  2 103,14, 0,50875,
chr20  50510517  50561376 PTPN1|NM_002827.4|overlapping|CTG 0 +  50510517  50510517 0,0,0  2 73,14, 0,50845,
chr20  58389284  58389329 VAPB|NM_004738.5|non-overlapping|CTG 0 +  58389284  58389284 0,0,0  1 45, 0,
chr20  58389366  58389372 VAPB|NM_004738.5|non-overlapping|TTG 0 +  58389366  58389366 0,0,0  1 6, 0,
chr20  58389391  58389454 VAPB|NM_004738.5|non-overlapping|ATT 0 +  58389391  58389391 0,0,0  1 63, 0,
chr20  58389410  58418280 VAPB|NM_004738.5|overlapping|GTG 0 +  58389410  58389410 0,0,0  2 107,70, 0,28800,
chr20  58651292  58651319 STX16|NM_001001433.3|non-overlapping|ATG 0 +  58651292  58651292 0,0,0  1 27, 0,
chr20  58651393  58651519 STX16|NM_001001433.3|non-overlapping|AGG 0 +  58651393  58651393 0,0,0  1 126, 0,
chr20  58651490  58651544 STX16|NM_001001433.3|non-overlapping|CTG 0 +  58651490  58651490 0,0,0  1 54, 0,
chr20  58651667  58651679 STX16|NM_001001433.3|non-overlapping|TTG 0 +  58651667  58651667 0,0,0  1 12, 0,
chr20  58651882  58651963 STX16|NM_001001433.3|non-overlapping|CTG 0 +  58651882  58651882 0,0,0  1 81, 0,
chr20  58651942  58651963 STX16|NM_001001433.3|non-overlapping|GTG 0 +  58651942  58651942 0,0,0  1 21, 0,
chr20  58891598  58891667 GNAS|NM_000516.7|non-overlapping|TTG 0 +  58891598  58891598 0,0,0  1 69, 0,
chr20  62256070  62256115 OSBPL2|NM_144498.4|non-overlapping|TTG 0 +  62256070  62256070 0,0,0  1 45, 0,
chr20  62256115  62256181 OSBPL2|NM_144498.4|non-overlapping|ATG 0 +  62256115  62256115 0,0,0  1 66, 0,
chr20  62256131  62256143 OSBPL2|NM_144498.4|non-overlapping|ATG 0 +  62256131  62256131 0,0,0  1 12, 0,
chr20  62952721  62957452 SLC17A9|NM_022082.4|overlapping|CTG 0 +  62952721  62952721 0,0,0  3 168,198,12, 0,4043,4719,
chr20  63658366  63658423 RTEL1|NM_001283009.2|non-overlapping|CTG 0 +  63658366  63658366 0,0,0  1 57, 0,
chr20  63659321  63659357 RTEL1|NM_001283009.2|non-overlapping|ATG 0 +  63659321  63659321 0,0,0  1 36, 0,
chr20  63895228  63928344 DNAJC5|NM_025219.3|non-overlapping|CTG 0 +  63895228  63895228 0,0,0  2 95,10, 0,33106,
chr20  63981148  63983091 PRPF6|NM_012469.4|overlapping|ACG 0 +  63981148  63981148 0,0,0  2 168,45, 0,1898,
chr20  63981153  63981225 PRPF6|NM_012469.4|non-overlapping|GTG 0 +  63981153  63981153 0,0,0  1 72, 0,
chr20  63981201  63981225 PRPF6|NM_012469.4|non-overlapping|CTG 0 +  63981201  63981201 0,0,0  1 24, 0,
chr20  63981208  63983091 PRPF6|NM_012469.4|overlapping|ATT 0 +  63981208  63981208 0,0,0  2 108,45, 0,1838,
chr21  31659754  31659763 SOD1|NM_000454.5|non-overlapping|GTG 0 +  31659754  31659754 0,0,0  1 9, 0,
chr21  37420349  37420358 DYRK1A|NM_101395.2|non-overlapping|ATG 0 +  37420349  37420349 0,0,0  1 9, 0,
chr21  45981815  45981854 COL6A1|NM_001848.3|overlapping|CTG 0 +  45981815  45981815 0,0,0  1 39, 0,
chr22  19961215  19961287 COMT|NM_000754.4|non-overlapping|CTG 0 +  19961215  19961215 0,0,0  1 72, 0,
chr22  19961261  19962684 COMT|NM_000754.4|overlapping|CTG 0 +  19961261  19961261 0,0,0  2 28,158, 0,1265,
chr22  20982322  20982469 LZTR1|NM_006767.4|overlapping|GTG 0 +  20982322  20982322 0,0,0  1 147, 0,
chr22  24270912  24276724 SPECC1L|NM_015330.6|non-overlapping|CTG 0 +  24270912  24270912 0,0,0  2 71,25, 0,5787,
chr22  24270924  24276724 SPECC1L|NM_015330.6|non-overlapping|GTG 0 +  24270924  24270924 0,0,0  2 59,25, 0,5775,
chr22  24270968  24276756 SPECC1L|NM_015330.6|non-overlapping|ATG 0 +  24270968  24270968 0,0,0  2 15,57, 0,5731,
chr22  24302206  24302269 SPECC1L|NM_015330.6|overlapping|ATG 0 +  24302206  24302206 0,0,0  1 63, 0,
chr22  29603617  29603653 NF2|NM_000268.4|non-overlapping|ATG 0 +  29603617  29603617 0,0,0  1 36, 0,
chr22  29603675  29604026 NF2|NM_000268.4|overlapping|CTG 0 +  29603675  29603675 0,0,0  1 351, 0,
chr22  29603779  29603914 NF2|NM_000268.4|non-overlapping|CTG 0 +  29603779  29603779 0,0,0  1 135, 0,
chr22  29603790  29603943 NF2|NM_000268.4|non-overlapping|AGG 0 +  29603790  29603790 0,0,0  1 153, 0,
chr22  29603901  29603943 NF2|NM_000268.4|non-overlapping|ATG 0 +  29603901  29603901 0,0,0  1 42, 0,
chr22  31754870  31754903 DEPDC5|NM_001242896.3|non-overlapping|ATG 0 +  31754870  31754870 0,0,0  1 33, 0,
chr22  32801829  32857325 TIMP3|NM_000362.5|overlapping|CTG 0 +  32801829  32801829 0,0,0  3 293,83,77, 0,47622,55419,
chr22  32801894  32802005 TIMP3|NM_000362.5|overlapping|ACG 0 +  32801894  32801894 0,0,0  1 111, 0,
chr22  32801921  32802005 TIMP3|NM_000362.5|overlapping|CTG 0 +  32801921  32801921 0,0,0  1 84, 0,
chr22  41092628  41092703 EP300|NM_001429.4|non-overlapping|ATG 0 +  41092628  41092628 0,0,0  1 75, 0,
chr22  41092589  41092703 EP300|NM_001429.4|non-overlapping|ATG 0 +  41092589  41092703 0,0,0  1 114, 0,
chr22  45502948  45525647 FBLN1|NM_006486.3|overlapping|TTG 0 +  45502948  45502948 0,0,0  3 116,106,105, 0,15733,22594,
chr22  45671862  45671877 ATXN10|NM_013236.4|non-overlapping|CTG 0 +  45671862  45671862 0,0,0  1 15, 0,
chr22  45671939  45689780 ATXN10|NM_013236.4|overlapping|CTG 0 +  45671939  45671939 0,0,0  2 240,69, 0,17772,
chr22  45671974  45672055 ATXN10|NM_013236.4|non-overlapping|ATC 0 +  45671974  45671974 0,0,0  1 81, 0,
chrX  10157002  10157065 CLCN4|NM_001830.4|non-overlapping|ATG 0 +  10157002  10157002 0,0,0  1 63, 0,
chrX  11111337  11111349 HCCS|NM_005333.5|non-overlapping|GTG 0 +  11111337  11111337 0,0,0  1 12, 0,
chrX  11111379  11111418 HCCS|NM_005333.5|non-overlapping|GTG 0 +  11111379  11111379 0,0,0  1 39, 0,
chrX  11111475  11112146 HCCS|NM_005333.5|overlapping|CTG 0 +  11111475  11111475 0,0,0  2 43,128, 0,543,
chrX  13734915  13735065 OFD1|NM_003611.3|non-overlapping|ACG 0 +  13734915  13734915 0,0,0  1 150, 0,
chrX  13734964  13735018 OFD1|NM_003611.3|non-overlapping|CTG 0 +  13734964  13734964 0,0,0  1 54, 0,
chrX  13735007  13735270 OFD1|NM_003611.3|overlapping|CTG 0 +  13735007  13735007 0,0,0  2 76,23, 0,240,
chrX  18506952  18506973 CDKL5|NM_001037343.2|non-overlapping|ATG 0 +  18506952  18506952 0,0,0  1 21, 0,
chrX  18507058  18507100 CDKL5|NM_001037343.2|overlapping|ATG 0 +  18507058  18507058 0,0,0  1 42, 0,
chrX  19343994  19349340 PDHA1|NM_000284.4|overlapping|CTG 0 +  19343994  19343994 0,0,0  2 100,29, 0,5317,
chrX  24465372  24465480 PDK3|NM_001142386.3|overlapping|GTG 0 +  24465372  24465372 0,0,0  1 108, 0,
chrX  41085706  41085814 USP9X|NM_001039590.3|non-overlapping|CTG 0 +  41085706  41085706 0,0,0  1 108, 0,
chrX  41085833  41085935 USP9X|NM_001039590.3|non-overlapping|CTG 0 +  41085833  41085833 0,0,0  1 102, 0,
chrX  41085917  41085935 USP9X|NM_001039590.3|non-overlapping|GTG 0 +  41085917  41085917 0,0,0  1 18, 0,
chrX  41086008  41086023 USP9X|NM_001039590.3|non-overlapping|ATG 0 +  41086008  41086008 0,0,0  1 15, 0,
chrX  41123492  41123507 USP9X|NM_001039590.3|non-overlapping|ATG 0 +  41123492  41123492 0,0,0  1 15, 0,
chrX  41334195  41334216 DDX3X|NM_001193416.3|non-overlapping|GTG 0 +  41334195  41334195 0,0,0  1 21, 0,
chrX  44873228  44873555 KDM6A|NM_021140.4|overlapping|ACG 0 +  44873228  44873228 0,0,0  1 327, 0,
chrX  44873314  44873320 KDM6A|NM_021140.4|non-overlapping|ATG 0 +  44873314  44873314 0,0,0  1 6, 0,
chrX  48509084  48511312 PORCN|NM_203475.3|overlapping|ACG 0 +  48509084  48509084 0,0,0  3 19,173,18, 0,699,2210,
chrX  48523735  48528457 EBP|NM_006579.3|CDS_extension|CTG 0 +  48523735  48523735 0,0,0  4 337,37,131,224, 0,3253,3419,4498,
chrX  48523755  48523842 EBP|NM_006579.3|overlapping|ATC 0 +  48523755  48523755 0,0,0  1 87, 0,
chrX  56563731  56563767 UBQLN2|NM_013444.4|non-overlapping|ATC 0 +  56563731  56563731 0,0,0  1 36, 0,
chrX  68829060  68829222 EFNB1|NM_004429.5|non-overlapping|CTG 0 +  68829060  68829060 0,0,0  1 162, 0,
chrX  68829108  68829222 EFNB1|NM_004429.5|non-overlapping|ACG 0 +  68829108  68829108 0,0,0  1 114, 0,
chrX  68829156  68829222 EFNB1|NM_004429.5|non-overlapping|ATG 0 +  68829156  68829156 0,0,0  1 66, 0,
chrX  68829262  68829733 EFNB1|NM_004429.5|non-overlapping|GTG 0 +  68829262  68829262 0,0,0  1 471, 0,
chrX  69616143  69616257 EDA|NM_001399.5|non-overlapping|ATG 0 +  69616143  69616143 0,0,0  1 114, 0,
chrX  77899525  77899540 COX7B|NM_001866.3|non-overlapping|TTG 0 +  77899525  77899525 0,0,0  1 15, 0,
chrX  96684857  96685043 DIAPH2|NM_006729.5|non-overlapping|GTG 0 +  96684857  96684857 0,0,0  1 186, 0,
chrX  96684863  96685043 DIAPH2|NM_006729.5|non-overlapping|ACG 0 +  96684863  96684863 0,0,0  1 180, 0,
chrX  96684895  96684988 DIAPH2|NM_006729.5|non-overlapping|CTG 0 +  96684895  96684895 0,0,0  1 93, 0,
chrX  96684958  96684988 DIAPH2|NM_006729.5|non-overlapping|GTG 0 +  96684958  96684958 0,0,0  1 30, 0,
chrX 101408247 101408283 HNRNPH2|NM_019597.5|non-overlapping|CTG 0 + 101408247 101408247 0,0,0  1 36, 0,
chrX 101408271 101408283 HNRNPH2|NM_019597.5|non-overlapping|ATA 0 + 101408271 101408271 0,0,0  1 12, 0,
chrX 101408299 101408317 HNRNPH2|NM_019597.5|non-overlapping|ATT 0 + 101408299 101408299 0,0,0  1 18, 0,
chrX 101411945 101412065 HNRNPH2|NM_019597.5|overlapping|ATT 0 + 101411945 101411945 0,0,0  1 120, 0,
chrX 108440010 108539780 COL4A5|NM_000495.5|overlapping|CTG 0 + 108440010 108440010 0,0,0  2 196,35, 0,99735,
chrX 108440056 108440071 COL4A5|NM_000495.5|non-overlapping|ATG 0 + 108440056 108440056 0,0,0  1 15, 0,
chrX 136169952 136169979 FHL1|NM_001449.5|non-overlapping|ATC 0 + 136169952 136169952 0,0,0  1 27, 0,
chrX 147911957 147911975 FMR1|NM_002024.6|non-overlapping|GTG 0 + 147911957 147911957 0,0,0  1 18, 0,
chrX 147912015 147921942 FMR1|NM_002024.6|overlapping|ACG 0 + 147912015 147912015 0,0,0  2 215,10, 0,9917,
chrX 147912039 147921942 FMR1|NM_002024.6|overlapping|GTG 0 + 147912039 147912039 0,0,0  2 191,10, 0,9893,
chrX 147912168 147921942 FMR1|NM_002024.6|overlapping|CTG 0 + 147912168 147912168 0,0,0  2 62,10, 0,9764,
chrX 154547657 154547729 IKBKG|NM_001099857.5|non-overlapping|CTG 0 + 154547657 154547657 0,0,0  1 72, 0,
chrX 154547721 154547742 IKBKG|NM_001099857.5|non-overlapping|ACG 0 + 154547721 154547721 0,0,0  1 21, 0,
chrX 154551995 154552010 IKBKG|NM_001099857.5|overlapping|CTG 0 + 154551995 154551995 0,0,0  1 15, 0,
chr4   1793343   1799322 FGFR3|NM_000142.5|overlapping|CTG 0 +   1793343   1793343 0,0,0  3 122,211,69, 0,489,5910,
chr4   1793398   1793440 FGFR3|NM_000142.5|non-overlapping|CTG 0 +   1793398   1793398 0,0,0  1 42, 0,
chr17  62065767  62065776 MED13|NM_005121.3|non-overlapping|ATG 0 -  62065767  62065767 0,0,0  1 9, 0,
chr17  62065840  62065870 MED13|NM_005121.3|non-overlapping|ATG 0 -  62065840  62065840 0,0,0  1 30, 0,
chr1   1348916   1349252 DVL1|NM_004421.3|overlapping|ACG 0 -   1348916   1348916 0,0,0  1 336, 0,
chr1   1349127   1349286 DVL1|NM_004421.3|non-overlapping|ATG 0 -   1349127   1349127 0,0,0  1 159, 0,
chr1   1348916   1349321 DVL1|NM_004421.3|overlapping|CTG 0 -   1348916   1348916 0,0,0  1 405, 0,
chr1   1348916   1349339 DVL1|NM_004421.3|overlapping|CTG 0 -   1348916   1348916 0,0,0  1 423, 0,
chr1   1349127   1349379 DVL1|NM_004421.3|non-overlapping|ACG 0 -   1349127   1349127 0,0,0  1 252, 0,
chr1   1825449   1825482 GNB1|NM_002074.5|overlapping|GTG 0 -   1825449   1825449 0,0,0  1 33, 0,
chr1   1839195   1839228 GNB1|NM_002074.5|non-overlapping|ATG 0 -   1839195   1839195 0,0,0  1 33, 0,
chr1   1839195   1890953 GNB1|NM_002074.5|non-overlapping|CTG 0 -   1839195   1839195 0,0,0  2 43,134, 0,51624,
chr1   1891046   1891064 GNB1|NM_002074.5|non-overlapping|ATG 0 -   1891046   1891046 0,0,0  1 18, 0,
chr1   8817387   8817411 RERE|NM_012102.4|non-overlapping|ATG 0 -   8817387   8817387 0,0,0  1 24, 0,
chr1  11259359  11262482 MTOR|NM_004958.4|overlapping|CTG 0 -  11259359  11259359 0,0,0  2 64,38, 0,3085,
chr1  16149018  16155981 EPHA2|NM_004431.5|overlapping|GTG 0 -  16149018  16149018 0,0,0  3 29,68,134, 0,1877,6829,
chr1  16149037  16155997 EPHA2|NM_004431.5|overlapping|GTG 0 -  16149037  16149037 0,0,0  3 10,68,150, 0,1858,6810,
chr1  17054033  17054087 SDHB|NM_003000.3|non-overlapping|ATG 0 -  17054033  17054033 0,0,0  1 54, 0,
chr1  26952383  26952392 KDF1|NM_152365.3|non-overlapping|ATG 0 -  26952383  26952383 0,0,0  1 9, 0,
chr1  27558497  27558512 AHDC1|NM_001029882.3|non-overlapping|ATG 0 -  27558497  27558497 0,0,0  1 15, 0,
chr1  27558733  27558763 AHDC1|NM_001029882.3|non-overlapping|ATG 0 -  27558733  27558733 0,0,0  1 30, 0,
chr1  27558733  27558871 AHDC1|NM_001029882.3|non-overlapping|CTG 0 -  27558733  27558733 0,0,0  1 138, 0,
chr1  27558867  27603434 AHDC1|NM_001029882.3|non-overlapping|CTG 0 -  27558867  27558867 0,0,0  2 16,38, 0,44529,
chr1  27558517  27603475 AHDC1|NM_001029882.3|non-overlapping|CTG 0 -  27558517  27558517 0,0,0  3 13,178,79, 0,188,44879,
chr1  31059474  31065647 PUM1|NM_001020658.2|overlapping|CTG 0 -  31059474  31059474 0,0,0  2 103,32, 0,6141,
chr1  31059474  31065656 PUM1|NM_001020658.2|overlapping|ATC 0 -  31059474  31059474 0,0,0  2 103,41, 0,6141,
chr1  31065691  31065706 PUM1|NM_001020658.2|non-overlapping|ATG 0 -  31065691  31065691 0,0,0  1 15, 0,
chr1  32817299  32817353 YARS|NM_003680.3|non-overlapping|ATG 0 -  32817299  32817299 0,0,0  1 54, 0,
chr1  32817270  32817303 YARS|NM_003680.3|non-overlapping|GTG 0 -  32817270  32817270 0,0,0  1 33, 0,
chr1  32817328  32817346 YARS|NM_003680.3|non-overlapping|CTG 0 -  32817328  32817328 0,0,0  1 18, 0,
chr1  40317142  40317274 COL9A2|NM_001852.4|overlapping|CTG 0 -  40317142  40317142 0,0,0  1 132, 0,
chr1  42943314  42958758 SLC2A1|NM_006516.4|overlapping|GTG 0 -  42943314  42943314 0,0,0  2 7,125, 0,15319,
chr1  42943314  42958782 SLC2A1|NM_006516.4|overlapping|ACG 0 -  42943314  42943314 0,0,0  2 7,149, 0,15319,
chr1  42958726  42958807 SLC2A1|NM_006516.4|non-overlapping|ACG 0 -  42958726  42958726 0,0,0  1 81, 0,
chr1  42931057  42958841 SLC2A1|NM_006516.4|overlapping|GTG 0 -  42931057  42931057 0,0,0  3 149,96,208, 0,12168,27576,
chr1  91022007  91022040 ZNF644|NM_201269.3|non-overlapping|ACG 0 -  91022007  91022007 0,0,0  1 33, 0,
chr1  92297503  92298021 GLMN|NM_053274.3|overlapping|ATC 0 -  92297503  92297503 0,0,0  2 26,61, 0,457,
chr1  92298022  92298959 GLMN|NM_053274.3|non-overlapping|GTG 0 -  92298022  92298022 0,0,0  2 7,35, 0,902,
chr1  92483380  92483545 GFI1|NM_005263.5|overlapping|GTG 0 -  92483380  92483380 0,0,0  1 165, 0,
chr1  92483547  92486755 GFI1|NM_005263.5|non-overlapping|ATG 0 -  92483547  92483547 0,0,0  2 39,30, 0,3178,
chr1 103108272 103108284 COL11A1|NM_001854.4|non-overlapping|ATG 0 - 103108272 103108272 0,0,0  1 12, 0,
chr1 108185893 108200176 SLC25A24|NM_013386.5|overlapping|GTG 0 - 108185893 108185893 0,0,0  2 61,221, 0,14062,
chr1 108136652 108200183 SLC25A24|NM_013386.5|CDS_extension|ATC 0 - 108136652 108136652 0,0,0 10 185,151,168,108,153,159,112,88,127,228, 0,2405,6890,11626,18330,20809,24529,45288,49175,63303,
chr1 108185893 108200212 SLC25A24|NM_013386.5|overlapping|CTG 0 - 108185893 108185893 0,0,0  2 61,257, 0,14062,
chr1 108136652 108200264 SLC25A24|NM_013386.5|CDS_extension|ACG 0 - 108136652 108136652 0,0,0 10 185,151,168,108,153,159,112,88,127,309, 0,2405,6890,11626,18330,20809,24529,45288,49175,63303,
chr1 112929338 112956086 SLC16A1|NM_003051.4|non-overlapping|CTG 0 - 112929338 112929338 0,0,0  2 14,52, 0,26696,
chr1 112929309 112929330 SLC16A1|NM_003051.4|non-overlapping|TTG 0 - 112929309 112929309 0,0,0  1 21, 0,
chr1 112956036 112956141 SLC16A1|NM_003051.4|non-overlapping|ACG 0 - 112956036 112956036 0,0,0  1 105, 0,
chr1 112929238 112956154 SLC16A1|NM_003051.4|overlapping|CTG 0 - 112929238 112929238 0,0,0  2 114,120, 0,26796,
chr1 112929338 112956173 SLC16A1|NM_003051.4|non-overlapping|CTG 0 - 112929338 112929338 0,0,0  2 14,139, 0,26696,
chr1 112929238 112956184 SLC16A1|NM_003051.4|overlapping|CTG 0 - 112929238 112929238 0,0,0  2 114,150, 0,26796,
chr1 113859459 113871670 PTPN22|NM_015967.7|overlapping|ATG 0 - 113859459 113859459 0,0,0  2 1,134, 0,12077,
chr1 113871671 113871686 PTPN22|NM_015967.7|non-overlapping|ATG 0 - 113871671 113871671 0,0,0  1 15, 0,
chr1 113871682 113871733 PTPN22|NM_015967.7|non-overlapping|ATG 0 - 113871682 113871682 0,0,0  1 51, 0,
chr1 114716156 114716735 NRAS|NM_002524.5|overlapping|ATG 0 - 114716156 114716156 0,0,0  2 21,78, 0,501,
chr1 151459202 151459229 POGZ|NM_015100.4|non-overlapping|CTG 0 - 151459202 151459202 0,0,0  1 27, 0,
chr1 151459213 151459291 POGZ|NM_015100.4|non-overlapping|ACG 0 - 151459213 151459213 0,0,0  1 78, 0,
chr1 151442116 151459302 POGZ|NM_015100.4|overlapping|ACG 0 - 151442116 151442116 0,0,0  2 89,151, 0,17035,
chr1 151459213 151459423 POGZ|NM_015100.4|non-overlapping|ACG 0 - 151459213 151459213 0,0,0  1 210, 0,
chr1 153828339 153922774 GATAD2B|NM_020699.4|overlapping|CTG 0 - 153828339 153828339 0,0,0  2 9,42, 0,94393,
chr1 153828339 153922825 GATAD2B|NM_020699.4|overlapping|CTG 0 - 153828339 153828339 0,0,0  2 9,93, 0,94393,
chr1 153922757 153922901 GATAD2B|NM_020699.4|non-overlapping|GTG 0 - 153922757 153922757 0,0,0  1 144, 0,
chr1 154602579 154608022 ADAR|NM_001111.5|overlapping|ATG 0 - 154602579 154602579 0,0,0  2 47,31, 0,5412,
chr1 154627955 154627970 ADAR|NM_001111.5|non-overlapping|TTG 0 - 154627955 154627955 0,0,0  1 15, 0,
chr1 155241125 155244543 GBA|NM_001005741.3|non-overlapping|TTG 0 - 155241125 155241125 0,0,0  2 55,38, 0,3380,
chr1 155241125 155244561 GBA|NM_001005741.3|non-overlapping|CTG 0 - 155241125 155241125 0,0,0  2 55,56, 0,3380,
chr1 155241125 155244624 GBA|NM_001005741.3|non-overlapping|CTG 0 - 155241125 155241125 0,0,0  2 55,119, 0,3380,
chr1 155521547 155521577 ASH1L|NM_018489.3|non-overlapping|ATG 0 - 155521547 155521547 0,0,0  1 30, 0,
chr1 155521558 155521609 ASH1L|NM_018489.3|non-overlapping|CTG 0 - 155521558 155521558 0,0,0  1 51, 0,
chr1 155910732 155911278 RIT1|NM_006912.6|overlapping|CTG 0 - 155910732 155910732 0,0,0  2 72,36, 0,510,
chr1 155910732 155911293 RIT1|NM_006912.6|overlapping|GTG 0 - 155910732 155910732 0,0,0  2 72,51, 0,510,
chr1 160261298 160261316 DCAF8|NM_015726.4|non-overlapping|CTG 0 - 160261298 160261298 0,0,0  1 18, 0,
chr1 160340254 160343192 COPA|NM_004371.4|overlapping|ATC 0 - 160340254 160340254 0,0,0  2 40,62, 0,2876,
chr1 160343195 160343216 COPA|NM_004371.4|non-overlapping|GTG 0 - 160343195 160343195 0,0,0  1 21, 0,
chr1 160343163 160343241 COPA|NM_004371.4|overlapping|GTG 0 - 160343163 160343163 0,0,0  1 78, 0,
chr1 182586718 182586859 RNASEL|NM_021133.4|overlapping|TTG 0 - 182586718 182586718 0,0,0  1 141, 0,
chr1 182586879 182586921 RNASEL|NM_021133.4|non-overlapping|CTG 0 - 182586879 182586879 0,0,0  1 42, 0,
chr1 182589188 182589209 RNASEL|NM_021133.4|non-overlapping|TTG 0 - 182589188 182589188 0,0,0  1 21, 0,
chr1 209650946 209652399 LAMB3|NM_000228.3|non-overlapping|CTG 0 - 209650946 209650946 0,0,0  2 35,31, 0,1422,
chr1 209801354 209801987 IRF6|NM_006147.4|overlapping|CTG 0 - 209801354 209801354 0,0,0  2 62,16, 0,617,
chr1 209801354 209802002 IRF6|NM_006147.4|overlapping|ATC 0 - 209801354 209801354 0,0,0  2 62,31, 0,617,
chr1 209805952 209805991 IRF6|NM_006147.4|non-overlapping|TTG 0 - 209805952 209805952 0,0,0  1 39, 0,
chr1 209801354 209806013 IRF6|NM_006147.4|overlapping|ACG 0 - 209801354 209801354 0,0,0  3 62,72,67, 0,617,4592,
chr1 224389834 224434405 WDR26|NM_025160.7|CDS_extension|ACG 0 - 224389834 224389834 0,0,0 14 26,186,130,79,146,120,141,139,157,98,137,105,100,722, 0,3993,8262,8680,9054,11115,14595,21592,28425,29683,34683,41642,41847,43849,
chr1 224434287 224434593 WDR26|NM_025160.7|non-overlapping|CTG 0 - 224434287 224434287 0,0,0  1 306, 0,
chr1 224434287 224434785 WDR26|NM_025160.7|non-overlapping|CTG 0 - 224434287 224434287 0,0,0  1 498, 0,
chr1 225424084 225427978 LBR|NM_002296.4|non-overlapping|GTG 0 - 225424084 225424084 0,0,0  2 5,25, 0,3869,
chr1 225424084 225427996 LBR|NM_002296.4|non-overlapping|ATT 0 - 225424084 225424084 0,0,0  2 5,43, 0,3869,
chr1 225424064 225428009 LBR|NM_002296.4|overlapping|TTG 0 - 225424064 225424064 0,0,0  2 25,56, 0,3889,
chr1 225424084 225428026 LBR|NM_002296.4|non-overlapping|GTG 0 - 225424084 225424084 0,0,0  2 5,73, 0,3869,
chr1 229434015 229434021 ACTA1|NM_001100.4|non-overlapping|TTG 0 - 229434015 229434015 0,0,0  1 6, 0,
chr1 231422099 231422111 EGLN1|NM_022051.3|non-overlapping|ATG 0 - 231422099 231422099 0,0,0  1 12, 0,
chr1 231422099 231422156 EGLN1|NM_022051.3|non-overlapping|TTG 0 - 231422099 231422099 0,0,0  1 57, 0,
chr1 231422219 231422267 EGLN1|NM_022051.3|non-overlapping|ATG 0 - 231422219 231422219 0,0,0  1 48, 0,
chr1 243843166 243843223 AKT3|NM_005465.7|overlapping|CTG 0 - 243843166 243843166 0,0,0  1 57, 0,
chr1 244864356 244864368 HNRNPU|NM_031844.3|non-overlapping|GTG 0 - 244864356 244864356 0,0,0  1 12, 0,
chr1 244864356 244864437 HNRNPU|NM_031844.3|non-overlapping|ACG 0 - 244864356 244864356 0,0,0  1 81, 0,
chr1 244864340 244864475 HNRNPU|NM_031844.3|non-overlapping|TTG 0 - 244864340 244864340 0,0,0  1 135, 0,
chr1 244864356 244864485 HNRNPU|NM_031844.3|non-overlapping|GTG 0 - 244864356 244864356 0,0,0  1 129, 0,
chr2   8837526   8837592 KIDINS220|NM_020738.4|non-overlapping|ATG 0 -   8837526   8837526 0,0,0  1 66, 0,
chr2  10445047  10445227 ODC1|NM_002539.3|non-overlapping|TTG 0 -  10445047  10445047 0,0,0  2 2,73, 0,107,
chr2  10448121  10448154 ODC1|NM_002539.3|non-overlapping|ATG 0 -  10448121  10448121 0,0,0  1 33, 0,
chr2  10448121  10448193 ODC1|NM_002539.3|non-overlapping|CTG 0 -  10448121  10448121 0,0,0  1 72, 0,
chr2  25314074  25314089 DNMT3A|NM_175629.2|non-overlapping|ATG 0 -  25314074  25314074 0,0,0  1 15, 0,
chr2  25314081  25314132 DNMT3A|NM_175629.2|non-overlapping|CTG 0 -  25314081  25314081 0,0,0  1 51, 0,
chr2  25878394  25878448 ASXL2|NM_018263.6|non-overlapping|ATG 0 -  25878394  25878394 0,0,0  1 54, 0,
chr2  47176453  47176480 CALM2|NM_001743.6|non-overlapping|GTG 0 -  47176453  47176453 0,0,0  1 27, 0,
chr2  47170751  47176490 CALM2|NM_001743.6|overlapping|CTG 0 -  47170751  47170751 0,0,0  2 13,50, 0,5689,
chr2  47176486  47176504 CALM2|NM_001743.6|non-overlapping|GTG 0 -  47176486  47176486 0,0,0  1 18, 0,
chr2  47905716  47905773 FBXO11|NM_001190274.2|overlapping|GTG 0 -  47905716  47905716 0,0,0  1 57, 0,
chr2  47808117  47905912 FBXO11|NM_001190274.2|CDS_extension|CTG 0 -  47808117  47808117 0,0,0 23 130,99,109,108,111,144,77,86,123,95,86,218,138,107,112,107,133,84,130,145,82,128,424, 0,211,1040,1482,2198,5116,5673,10661,10838,12244,14100,15025,24231,24454,24651,24846,26461,26670,27754,30741,31301,31524,97371,
chr2  47905716  47906013 FBXO11|NM_001190274.2|overlapping|CTG 0 -  47905716  47905716 0,0,0  1 297, 0,
chr2  47839765  47906276 FBXO11|NM_001190274.2|overlapping|ATT 0 -  47839765  47839765 0,0,0  2 4,788, 0,65723,
chr2  47906420  47906471 FBXO11|NM_001190274.2|non-overlapping|ATG 0 -  47906420  47906420 0,0,0  1 51, 0,
chr2  55922904  55922925 EFEMP1|NM_001039348.3|non-overlapping|CTG 0 -  55922904  55922904 0,0,0  1 21, 0,
chr2  60553351  60553387 BCL11A|NM_022893.4|non-overlapping|ATG 0 -  60553351  60553351 0,0,0  1 36, 0,
chr2  60553413  60553464 BCL11A|NM_022893.4|non-overlapping|ACG 0 -  60553413  60553413 0,0,0  1 51, 0,
chr2  60553413  60553467 BCL11A|NM_022893.4|non-overlapping|ATG 0 -  60553413  60553413 0,0,0  1 54, 0,
chr2  70236146  70248465 TIA1|NM_022173.4|overlapping|CTG 0 -  70236146  70236146 0,0,0  2 29,61, 0,12258,
chr2  70236146  70248492 TIA1|NM_022173.4|overlapping|ATT 0 -  70236146  70236146 0,0,0  2 29,88, 0,12258,
chr2  70248495  70248507 TIA1|NM_022173.4|non-overlapping|ATA 0 -  70248495  70248495 0,0,0  1 12, 0,
chr2  74380113  74380176 DCTN1|NM_004082.5|non-overlapping|ATG 0 -  74380113  74380113 0,0,0  1 63, 0,
chr2  86337552  86337603 REEP1|NM_022912.3|non-overlapping|CTG 0 -  86337552  86337552 0,0,0  1 51, 0,
chr2  96265140  96265458 TMEM127|NM_017849.4|overlapping|CTG 0 -  96265140  96265140 0,0,0  1 318, 0,
chr2  96265140  96265476 TMEM127|NM_017849.4|overlapping|TTG 0 -  96265140  96265140 0,0,0  1 336, 0,
chr2  96265292  96265885 TMEM127|NM_017849.4|overlapping|CTG 0 -  96265292  96265292 0,0,0  2 220,17, 0,576,
chr2  96265292  96265894 TMEM127|NM_017849.4|overlapping|ATC 0 -  96265292  96265292 0,0,0  2 220,26, 0,576,
chr2  96265292  96265906 TMEM127|NM_017849.4|overlapping|CTG 0 -  96265292  96265292 0,0,0  2 220,38, 0,576,
chr2  96265292  96265915 TMEM127|NM_017849.4|overlapping|GTG 0 -  96265292  96265292 0,0,0  2 220,47, 0,576,
chr2  96265911  96265950 TMEM127|NM_017849.4|non-overlapping|CTG 0 -  96265911  96265911 0,0,0  1 39, 0,
chr2  96305414  96305462 SNRNP200|NM_014014.5|overlapping|CTG 0 -  96305414  96305414 0,0,0  1 48, 0,
chr2  96305424  96305502 SNRNP200|NM_014014.5|overlapping|CTG 0 -  96305424  96305424 0,0,0  1 78, 0,
chr2 112836236 112836741 IL1B|NM_000576.3|non-overlapping|CTG 0 - 112836236 112836236 0,0,0  2 8,34, 0,471,
chr2 136115854 136118080 CXCR4|NM_003467.3|overlapping|CTG 0 - 136115854 136115854 0,0,0  2 58,35, 0,2191,
chr2 136118101 136118119 CXCR4|NM_003467.3|non-overlapping|GTG 0 - 136118101 136118101 0,0,0  1 18, 0,
chr2 136118115 136118139 CXCR4|NM_003467.3|non-overlapping|CTG 0 - 136118115 136118115 0,0,0  1 24, 0,
chr2 144517363 144517381 ZEB2|NM_014795.4|non-overlapping|ATG 0 - 144517363 144517363 0,0,0  1 18, 0,
chr2 144517363 144519990 ZEB2|NM_014795.4|non-overlapping|ATG 0 - 144517363 144517363 0,0,0  2 56,52, 0,2575,
chr17  39197543  39197552 CACNB4|NM_199247.3|non-overlapping|ATG 0 -  39197543  39197543 0,0,0  1 9, 0,
chr17  39191552  39197613 CACNB4|NM_199247.3|overlapping|CTG 0 -  39191552  39191552 0,0,0  3 41,87,202, 0,3331,5859,
chr2 157818385 157818457 ACVR1|NM_001105.5|non-overlapping|GTG 0 - 157818385 157818385 0,0,0  1 72, 0,
chr2 157818523 157818535 ACVR1|NM_001105.5|non-overlapping|CTG 0 - 157818523 157818523 0,0,0  1 12, 0,
chr2 162318240 162318348 IFIH1|NM_022168.4|overlapping|ATC 0 - 162318240 162318240 0,0,0  1 108, 0,
chr2 162318417 162318654 IFIH1|NM_022168.4|non-overlapping|CTG 0 - 162318417 162318417 0,0,0  1 237, 0,
chr2 165176411 165176435 SCN3A|NM_006922.4|non-overlapping|ATG 0 - 165176411 165176411 0,0,0  1 24, 0,
chr2 165203845 165203869 SCN3A|NM_006922.4|non-overlapping|ATG 0 - 165203845 165203845 0,0,0  1 24, 0,
chr2 165203838 165203892 SCN3A|NM_006922.4|non-overlapping|ACG 0 - 165203838 165203838 0,0,0  1 54, 0,
chr2 165203956 165204016 SCN3A|NM_006922.4|non-overlapping|CTG 0 - 165203956 165203956 0,0,0  1 60, 0,
chr2 177264572 177264650 NFE2L2|NM_006164.5|overlapping|CTG 0 - 177264572 177264572 0,0,0  1 78, 0,
chr2 178807219 178807279 TTN|NM_133379.5|non-overlapping|ATA 0 - 178807219 178807219 0,0,0  1 60, 0,
chr2 178807275 178807302 TTN|NM_133379.5|non-overlapping|ATG 0 - 178807275 178807275 0,0,0  1 27, 0,
chr2 178807275 178807311 TTN|NM_133379.5|non-overlapping|ATG 0 - 178807275 178807275 0,0,0  1 36, 0,
chr2 189179606 189179621 COL5A2|NM_000393.5|non-overlapping|ATG 0 - 189179606 189179606 0,0,0  1 15, 0,
chr2 189179657 189179672 COL5A2|NM_000393.5|non-overlapping|ATG 0 - 189179657 189179657 0,0,0  1 15, 0,
chr2 189179676 189179751 COL5A2|NM_000393.5|non-overlapping|CTG 0 - 189179676 189179676 0,0,0  1 75, 0,
chr2 189580528 189580543 SLC40A1|NM_014585.6|non-overlapping|TTG 0 - 189580528 189580528 0,0,0  1 15, 0,
chr2 189580562 189580577 SLC40A1|NM_014585.6|non-overlapping|CTG 0 - 189580562 189580562 0,0,0  1 15, 0,
chr2 189580528 189580675 SLC40A1|NM_014585.6|non-overlapping|GTG 0 - 189580528 189580528 0,0,0  1 147, 0,
chr2 189580668 189580698 SLC40A1|NM_014585.6|non-overlapping|TTG 0 - 189580668 189580668 0,0,0  1 30, 0,
chr2 191009971 191013599 STAT1|NM_007315.4|overlapping|TTG 0 - 191009971 191009971 0,0,0  2 33,75, 0,3553,
chr2 191013637 191013661 STAT1|NM_007315.4|non-overlapping|ATG 0 - 191013637 191013637 0,0,0  1 24, 0,
chr2 191014040 191014064 STAT1|NM_007315.4|non-overlapping|CTG 0 - 191014040 191014040 0,0,0  1 24, 0,
chr2 191013637 191014120 STAT1|NM_007315.4|non-overlapping|ATC 0 - 191013637 191013637 0,0,0  2 41,103, 0,380,
chr2 197497372 197499819 HSPD1|NM_002156.5|overlapping|CTG 0 - 197497372 197497372 0,0,0  3 20,176,38, 0,1302,2409,
chr2 214797103 214809613 BARD1|NM_000465.4|overlapping|TTG 0 - 214797103 214797103 0,0,0  2 14,202, 0,12308,
chr2 214797103 214809634 BARD1|NM_000465.4|overlapping|CTG 0 - 214797103 214797103 0,0,0  2 14,223, 0,12308,
chr2 214809558 214809645 BARD1|NM_000465.4|overlapping|CTG 0 - 214809558 214809558 0,0,0  1 87, 0,
chr2 215361554 215435850 FN1|NM_212482.4|CDS_extension|GTG 0 - 215361554 215361554 0,0,0 46 72,111,107,126,165,139,467,90,180,90,177,88,188,270,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,196, 0,414,3324,3950,6308,8739,10354,11767,13659,14074,14943,16620,17575,19256,20657,21773,22465,23305,25134,26657,30077,31376,32973,35582,36125,37702,42834,44683,45572,46553,46743,48008,48379,53282,57687,59118,60536,61795,62591,63539,66625,69160,70278,71769,73141,74100,
chr2 215361554 215435871 FN1|NM_212482.4|CDS_extension|TTG 0 - 215361554 215361554 0,0,0 46 72,111,107,126,165,139,467,90,180,90,177,88,188,270,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,217, 0,414,3324,3950,6308,8739,10354,11767,13659,14074,14943,16620,17575,19256,20657,21773,22465,23305,25134,26657,30077,31376,32973,35582,36125,37702,42834,44683,45572,46553,46743,48008,48379,53282,57687,59118,60536,61795,62591,63539,66625,69160,70278,71769,73141,74100,
chr2 215434788 215435885 FN1|NM_212482.4|overlapping|ATT 0 - 215434788 215434788 0,0,0  2 36,231, 0,866,
chr2 215361554 215435889 FN1|NM_212482.4|CDS_extension|AGG 0 - 215361554 215361554 0,0,0 46 72,111,107,126,165,139,467,90,180,90,177,88,188,270,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,235, 0,414,3324,3950,6308,8739,10354,11767,13659,14074,14943,16620,17575,19256,20657,21773,22465,23305,25134,26657,30077,31376,32973,35582,36125,37702,42834,44683,45572,46553,46743,48008,48379,53282,57687,59118,60536,61795,62591,63539,66625,69160,70278,71769,73141,74100,
chr2 215435890 215435920 FN1|NM_212482.4|non-overlapping|TTG 0 - 215435890 215435890 0,0,0  1 30, 0,
chr2 215435890 215435935 FN1|NM_212482.4|non-overlapping|CTG 0 - 215435890 215435890 0,0,0  1 45, 0,
chr2 215435890 215435977 FN1|NM_212482.4|non-overlapping|CTG 0 - 215435890 215435890 0,0,0  1 87, 0,
chr2 215361554 215435985 FN1|NM_212482.4|CDS_extension|CTG 0 - 215361554 215361554 0,0,0 46 72,111,107,126,165,139,467,90,180,90,177,88,188,270,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,331, 0,414,3324,3950,6308,8739,10354,11767,13659,14074,14943,16620,17575,19256,20657,21773,22465,23305,25134,26657,30077,31376,32973,35582,36125,37702,42834,44683,45572,46553,46743,48008,48379,53282,57687,59118,60536,61795,62591,63539,66625,69160,70278,71769,73141,74100,
chr2 215434788 215436002 FN1|NM_212482.4|overlapping|CTG 0 - 215434788 215434788 0,0,0  2 36,348, 0,866,
chr2 219218732 219218756 ABCB6|NM_005689.4|non-overlapping|ATG 0 - 219218732 219218732 0,0,0  1 24, 0,
chr2 219252225 219253901 TUBA4A|NM_006000.3|overlapping|CTG 0 - 219252225 219252225 0,0,0  2 5,46, 0,1630,
chr2 223837557 223837566 AP1S3|NM_001039569.2|non-overlapping|ATG 0 - 223837557 223837557 0,0,0  1 9, 0,
chr2 224585063 224585069 CUL3|NM_003590.5|non-overlapping|ATG 0 - 224585063 224585063 0,0,0  1 6, 0,
chr2 224585287 224585335 CUL3|NM_003590.5|non-overlapping|ATG 0 - 224585287 224585287 0,0,0  1 48, 0,
chr2 229880062 229880104 TRIP12|NM_001284214.2|overlapping|ATG 0 - 229880062 229880062 0,0,0  1 42, 0,
chr2 229921879 229921894 TRIP12|NM_001284214.2|non-overlapping|TTG 0 - 229921879 229921879 0,0,0  1 15, 0,
chr2 229921883 229921925 TRIP12|NM_001284214.2|non-overlapping|CTG 0 - 229921883 229921883 0,0,0  1 42, 0,
chr2 229921879 229921990 TRIP12|NM_001284214.2|non-overlapping|TTG 0 - 229921879 229921879 0,0,0  1 111, 0,
chr2 237413998 237414019 COL6A3|NM_004369.4|non-overlapping|ATG 0 - 237413998 237413998 0,0,0  1 21, 0,
chr2 238288501 238288519 PER2|NM_022817.3|non-overlapping|CTG 0 - 238288501 238288501 0,0,0  1 18, 0,
chr2 240797684 240797798 KIF1A|NM_001244008.2|overlapping|CTG 0 - 240797684 240797684 0,0,0  1 114, 0,
chr2 240820131 240820152 KIF1A|NM_001244008.2|non-overlapping|ATG 0 - 240820131 240820131 0,0,0  1 21, 0,
chr2 240820131 240820164 KIF1A|NM_001244008.2|non-overlapping|ATG 0 - 240820131 240820131 0,0,0  1 33, 0,
chr3  12663905  12663959 RAF1|NM_002880.4|non-overlapping|ATG 0 -  12663905  12663905 0,0,0  1 54, 0,
chr3  12664058  12664088 RAF1|NM_002880.4|non-overlapping|ATG 0 -  12664058  12664058 0,0,0  1 30, 0,
chr3  24337310  24337319 THRB|NM_000461.5|non-overlapping|ATG 0 -  24337310  24337310 0,0,0  1 9, 0,
chr3  38630413  38633315 SCN5A|NM_001160160.2|overlapping|ATG 0 -  38630413  38630413 0,0,0  2 16,281, 0,2621,
chr3  38649620  38649650 SCN5A|NM_001160160.2|non-overlapping|ATG 0 -  38649620  38649620 0,0,0  1 30, 0,
chr3  49094025  49094046 QRICH1|NM_017730.4|non-overlapping|ATG 0 -  49094025  49094025 0,0,0  1 21, 0,
chr3  49903626  49903665 MST1R|NM_002447.4|non-overlapping|ACG 0 -  49903626  49903626 0,0,0  1 39, 0,
chr3  49903626  49903707 MST1R|NM_002447.4|non-overlapping|TTG 0 -  49903626  49903626 0,0,0  1 81, 0,
chr3  49887306  49903729 MST1R|NM_002447.4|CDS_extension|CTG 0 -  49887306  49887306 0,0,0 20 256,137,166,110,182,81,207,102,166,147,210,94,162,137,166,161,171,129,189,1350, 0,2617,3178,3890,4092,4451,7860,8140,8408,8654,8888,9233,9422,9973,10213,10744,11211,11560,11768,15073,
chr3  49903626  49903773 MST1R|NM_002447.4|non-overlapping|TTG 0 -  49903626  49903626 0,0,0  1 147, 0,
chr3  49903709  49903802 MST1R|NM_002447.4|non-overlapping|GTG 0 -  49903709  49903709 0,0,0  1 93, 0,
chr3  49903626  49903821 MST1R|NM_002447.4|non-overlapping|GTG 0 -  49903626  49903626 0,0,0  1 195, 0,
chr3  50349810  50350735 NPRL2|NM_006545.5|overlapping|CTG 0 -  50349810  50349810 0,0,0  3 23,92,161, 0,120,764,
chr3  52409874  52409907 BAP1|NM_004656.4|overlapping|ATG 0 -  52409874  52409874 0,0,0  1 33, 0,
chr3  52409897  52409972 BAP1|NM_004656.4|non-overlapping|CTG 0 -  52409897  52409897 0,0,0  1 75, 0,
chr3  52409874  52409988 BAP1|NM_004656.4|overlapping|TTG 0 -  52409874  52409874 0,0,0  1 114, 0,
chr3  52409874  52409997 BAP1|NM_004656.4|overlapping|CTG 0 -  52409874  52409874 0,0,0  1 123, 0,
chr3  98593516  98593543 CPOX|NM_000097.7|non-overlapping|CTG 0 -  98593516  98593516 0,0,0  1 27, 0,
chr3 114389026 114389077 ZBTB20|NM_001164343.2|non-overlapping|ATG 0 - 114389026 114389026 0,0,0  1 51, 0,
chr3 115071275 115071329 ZBTB20|NM_001164343.2|non-overlapping|CTG 0 - 115071275 115071275 0,0,0  1 54, 0,
chr3 114759211 114759235 ZBTB20|NM_001164344.2|non-overlapping|ATG 0 - 114759211 114759235 0,0,0  1 24, 0,
chr3 123448523 123448772 ADCY5|NM_183357.3|overlapping|CTG 0 - 123448523 123448523 0,0,0  1 249, 0,
chr3 123614104 123831586 MYLK|NM_053025.4|CDS_extension|CTG 0 - 123614104 123614104 0,0,0 32 245,132,130,124,153,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,207,536,19,166,166,49,208,168,39, 0,4534,6102,12713,15369,23966,26182,33119,34866,35057,43021,50000,52114,53032,68119,78630,85915,87333,93649,94593,95651,108023,111839,118791,119582,121293,123273,124792,125848,138226,179572,217443,
chr3 123793767 123831653 MYLK|NM_053025.4|overlapping|CTG 0 - 123793767 123793767 0,0,0  2 77,106, 0,37780,
chr3 123876560 123876602 MYLK|NM_053025.4|non-overlapping|ATT 0 - 123876560 123876560 0,0,0  1 42, 0,
chr3 123876560 123884298 MYLK|NM_053025.4|non-overlapping|CTG 0 - 123876560 123876560 0,0,0  2 57,93, 0,7645,
chr3 125323334 125323373 ZNF148|NM_021964.3|non-overlapping|ATG 0 - 125323334 125323334 0,0,0  1 39, 0,
chr3 125323420 125331187 ZNF148|NM_021964.3|non-overlapping|ATG 0 - 125323420 125323420 0,0,0  2 24,30, 0,7737,
chr3 125331171 125331225 ZNF148|NM_021964.3|non-overlapping|ATC 0 - 125331171 125331171 0,0,0  1 54, 0,
chr3 125331196 125375149 ZNF148|NM_021964.3|non-overlapping|CTG 0 - 125331196 125331196 0,0,0  2 42,48, 0,43905,
chr3 125375126 125375216 ZNF148|NM_021964.3|non-overlapping|CTG 0 - 125375126 125375126 0,0,0  1 90, 0,
chr3 125375160 125375325 ZNF148|NM_021964.3|non-overlapping|ATG 0 - 125375160 125375160 0,0,0  1 165, 0,
chr3 128493013 128493052 GATA2|NM_032638.5|non-overlapping|ATG 0 - 128493013 128493013 0,0,0  1 39, 0,
chr3 128493100 128493121 GATA2|NM_032638.5|non-overlapping|CTG 0 - 128493100 128493100 0,0,0  1 21, 0,
chr3 128493057 128493126 GATA2|NM_032638.5|non-overlapping|ATT 0 - 128493057 128493057 0,0,0  1 69, 0,
chr3 128493057 128493132 GATA2|NM_032638.5|non-overlapping|CTG 0 - 128493057 128493057 0,0,0  1 75, 0,
chr3 129171765 129183820 CNBP|NM_001127192.2|non-overlapping|CTG 0 - 129171765 129171765 0,0,0  2 6,45, 0,12010,
chr3 129171743 129183858 CNBP|NM_001127192.2|overlapping|ATA 0 - 129171743 129171743 0,0,0  2 28,83, 0,12032,
chr3 136752341 136752353 STAG1|NM_005862.3|non-overlapping|ATG 0 - 136752341 136752341 0,0,0  1 12, 0,
chr3 136752324 136752363 STAG1|NM_005862.3|non-overlapping|ATG 0 - 136752324 136752324 0,0,0  1 39, 0,
chr3 155854232 155854304 SLC33A1|NM_004733.4|non-overlapping|CTG 0 - 155854232 155854232 0,0,0  1 72, 0,
chr3 177064989 177064998 TBL1XR1|NM_024665.7|non-overlapping|ATG 0 - 177064989 177064989 0,0,0  1 9, 0,
chr3 177064979 177098479 TBL1XR1|NM_024665.7|non-overlapping|ATG 0 - 177064979 177064979 0,0,0  2 43,14, 0,33486,
chr3 177064989 177098513 TBL1XR1|NM_024665.7|non-overlapping|GTG 0 - 177064989 177064989 0,0,0  2 33,48, 0,33476,
chr3 177098509 177197136 TBL1XR1|NM_024665.7|non-overlapping|AGG 0 - 177098509 177098509 0,0,0  2 32,16, 0,98611,
chr3 177098509 177197163 TBL1XR1|NM_024665.7|non-overlapping|ATT 0 - 177098509 177098509 0,0,0  2 32,43, 0,98611,
chr3 177197250 177197262 TBL1XR1|NM_024665.7|non-overlapping|CTG 0 - 177197250 177197250 0,0,0  1 12, 0,
chr3 177197250 177197328 TBL1XR1|NM_024665.7|non-overlapping|CTG 0 - 177197250 177197250 0,0,0  1 78, 0,
chr3 177197250 177197442 TBL1XR1|NM_024665.7|non-overlapping|CTG 0 - 177197250 177197250 0,0,0  1 192, 0,
chr3 179426213 179426222 GNB4|NM_021629.4|non-overlapping|CTG 0 - 179426213 179426213 0,0,0  1 9, 0,
chr3 179426218 179426230 GNB4|NM_021629.4|non-overlapping|ATT 0 - 179426218 179426218 0,0,0  1 12, 0,
chr3 179426218 179451360 GNB4|NM_021629.4|non-overlapping|CTG 0 - 179426218 179426218 0,0,0  2 24,15, 0,25127,
chr3 179426225 179451403 GNB4|NM_021629.4|non-overlapping|CTG 0 - 179426225 179426225 0,0,0  2 17,58, 0,25120,
chr3 185824956 185825034 IGF2BP2|NM_006548.6|overlapping|ACG 0 - 185824956 185824956 0,0,0  1 78, 0,
chr4  10021454  10021487 SLC2A9|NM_020041.3|non-overlapping|ATG 0 -  10021454  10021454 0,0,0  1 33, 0,
chr4  16075908  16075929 PROM1|NM_006017.3|non-overlapping|ATG 0 -  16075908  16075908 0,0,0  1 21, 0,
chr4  16075817  16076039 PROM1|NM_006017.3|overlapping|CTG 0 -  16075817  16075817 0,0,0  1 222, 0,
chr4  54064449  54064497 CHIC2|NM_012110.4|non-overlapping|ATG 0 -  54064449  54064449 0,0,0  1 48, 0,
chr4  54064502  54064532 CHIC2|NM_012110.4|non-overlapping|ATG 0 -  54064502  54064502 0,0,0  1 30, 0,
chr4  54064502  54064550 CHIC2|NM_012110.4|non-overlapping|GTG 0 -  54064502  54064502 0,0,0  1 48, 0,
chr4  84896912  84896966 WDFY3|NM_014991.6|non-overlapping|ATG 0 -  84896912  84896912 0,0,0  1 54, 0,
chr4  84896981  84932294 WDFY3|NM_014991.6|non-overlapping|ATG 0 -  84896981  84896981 0,0,0  2 29,25, 0,35288,
chr4  88158511  88158550 ABCG2|NM_004827.3|non-overlapping|ATG 0 -  88158511  88158511 0,0,0  1 39, 0,
chr4  88158572  88158683 ABCG2|NM_004827.3|non-overlapping|CTG 0 -  88158572  88158572 0,0,0  1 111, 0,
chr4  89836993  89837047 SNCA|NM_000345.4|non-overlapping|CTG 0 -  89836993  89836993 0,0,0  1 54, 0,
chr4  89837098  89837110 SNCA|NM_000345.4|non-overlapping|ACG 0 -  89837098  89837098 0,0,0  1 12, 0,
chr4 101347269 101347386 PPP3CA|NM_000944.5|non-overlapping|CTG 0 - 101347269 101347269 0,0,0  1 117, 0,
chr4 101347210 101347489 PPP3CA|NM_000944.5|non-overlapping|CTG 0 - 101347210 101347210 0,0,0  1 279, 0,
chr4 110622667 110622688 PITX2|NM_000325.6|non-overlapping|ATG 0 - 110622667 110622667 0,0,0  1 21, 0,
chr4 110622605 110622749 PITX2|NM_000325.6|non-overlapping|TTG 0 - 110622605 110622605 0,0,0  1 144, 0,
chr4 110622881 110622992 PITX2|NM_000325.6|non-overlapping|GTG 0 - 110622881 110622881 0,0,0  1 111, 0,
chr4 110623031 110623100 PITX2|NM_000325.6|non-overlapping|ATG 0 - 110623031 110623100 0,0,0  1 69, 0,
chr4 110632952 110636898 PITX2|NM_153426.2|overlapping|CTG 0 - 110632952 110632952 0,0,0  2 56,118, 0,3828,
chr4 110632952 110636994 PITX2|NM_153426.2|overlapping|CTG 0 - 110632952 110632952 0,0,0  2 56,214, 0,3828,
chr4 110636956 110637040 PITX2|NM_153426.2|non-overlapping|ATG 0 - 110636956 110636956 0,0,0  1 84, 0,
chr4 121696603 121696880 ANXA5|NM_001154.4|non-overlapping|TTG 0 - 121696603 121696603 0,0,0  2 21,18, 0,259,
chr4 148436828 148442323 NR3C2|NM_000901.5|overlapping|CTG 0 - 148436828 148436828 0,0,0  2 34,164, 0,5331,
chr4 169602640 169602649 NEK1|NM_012224.4|non-overlapping|ATG 0 - 169602640 169602640 0,0,0  1 9, 0,
chr4 169612100 169612532 NEK1|NM_012224.4|non-overlapping|CTG 0 - 169612100 169612100 0,0,0  1 432, 0,
chr4 176792545 176792578 VEGFC|NM_005429.5|non-overlapping|ATG 0 - 176792545 176792545 0,0,0  1 33, 0,
chr4 185422559 185425879 UFSP2|NM_018359.5|overlapping|ACG 0 - 185422559 185422559 0,0,0  2 4,14, 0,3306,
chr5   1294313   1295038 TERT|NM_198253.3|overlapping|CTG 0 -   1294313   1294313 0,0,0  2 353,268, 0,457,
chr5  14871634  14871766 ANKH|NM_054027.6|non-overlapping|ATG 0 -  14871634  14871634 0,0,0  1 132, 0,
chr5  75511439  75511517 COL4A3BP|NM_001379029.1|non-overlapping|ATT 0 -  75511439  75511439 0,0,0  1 78, 0,
chr5  75511583  75511607 COL4A3BP|NM_001379029.1|non-overlapping|ATG 0 -  75511583  75511583 0,0,0  1 24, 0,
chr5  82277747  82278337 RPS23|NM_001025.5|overlapping|GTG 0 -  82277747  82277747 0,0,0  2 105,18, 0,572,
chr5  88823900  88823921 MEF2C|NM_001193347.1|non-overlapping|ATG 0 -  88823900  88823900 0,0,0  1 21, 0,
chr5  88882970  88882991 MEF2C|NM_002397.5|non-overlapping|ATA 0 -  88882970  88882970 0,0,0  1 21, 0,
chr5  88883044  88883089 MEF2C|NM_002397.5|non-overlapping|ATG 0 -  88883044  88883044 0,0,0  1 45, 0,
chr5  88883122  88883146 MEF2C|NM_002397.5|non-overlapping|ATC 0 -  88883122  88883122 0,0,0  1 24, 0,
chr5  98926398  98926434 CHD1|NM_001270.4|non-overlapping|CTG 0 -  98926398  98926398 0,0,0  1 36, 0,
chr5  98926382  98926454 CHD1|NM_001270.4|overlapping|ATT 0 -  98926382  98926382 0,0,0  1 72, 0,
chr5 122078054 122078162 LOX|NM_002317.7|non-overlapping|TTG 0 - 122078054 122078054 0,0,0  1 108, 0,
chr5 122078158 122078206 LOX|NM_002317.7|non-overlapping|CTG 0 - 122078158 122078158 0,0,0  1 48, 0,
chr5 128537811 128537877 FBN2|NM_001999.4|non-overlapping|ATG 0 - 128537811 128537811 0,0,0  1 66, 0,
chr5 128537690 128537954 FBN2|NM_001999.4|non-overlapping|ATT 0 - 128537690 128537690 0,0,0  1 264, 0,
chr5 128537971 128538136 FBN2|NM_001999.4|non-overlapping|CTG 0 - 128537971 128537971 0,0,0  1 165, 0,
chr5 128537690 128538203 FBN2|NM_001999.4|non-overlapping|CTG 0 - 128537690 128537690 0,0,0  1 513, 0,
chr5 132227031 132227103 P4HA2|NM_004199.3|non-overlapping|CTG 0 - 132227031 132227031 0,0,0  1 72, 0,
chr5 132227194 132227203 P4HA2|NM_004199.3|non-overlapping|ATT 0 - 132227194 132227194 0,0,0  1 9, 0,
chr5 132963275 132963290 AFF4|NM_014423.4|non-overlapping|ATG 0 - 132963275 132963275 0,0,0  1 15, 0,
chr5 132963328 132963343 AFF4|NM_014423.4|non-overlapping|ATG 0 - 132963328 132963328 0,0,0  1 15, 0,
chr5 132963462 132963498 AFF4|NM_014423.4|non-overlapping|ATG 0 - 132963462 132963462 0,0,0  1 36, 0,
chr5 135033972 135034029 PITX1|NM_002653.5|non-overlapping|ATG 0 - 135033972 135033972 0,0,0  1 57, 0,
chr5 135033972 135034074 PITX1|NM_002653.5|non-overlapping|CTG 0 - 135033972 135033972 0,0,0  1 102, 0,
chr5 135033972 135034101 PITX1|NM_002653.5|non-overlapping|CTG 0 - 135033972 135033972 0,0,0  1 129, 0,
chr5 135034097 135034139 PITX1|NM_002653.5|non-overlapping|CTG 0 - 135034097 135034097 0,0,0  1 42, 0,
chr5 135033972 135034218 PITX1|NM_002653.5|non-overlapping|CTG 0 - 135033972 135033972 0,0,0  1 246, 0,
chr5 137735746 137735767 KLHL3|NM_017415.3|non-overlapping|ATG 0 - 137735746 137735746 0,0,0  1 21, 0,
chr5 138575314 138575368 HSPA9|NM_004134.7|overlapping|TTG 0 - 138575314 138575314 0,0,0  1 54, 0,
chr5 138574121 138575394 HSPA9|NM_004134.7|overlapping|CTG 0 - 138574121 138574121 0,0,0  2 5,157, 0,1116,
chr5 139481625 139482241 STING1|NM_198282.4|overlapping|ATC 0 - 139481625 139481625 0,0,0  2 79,32, 0,584,
chr5 139481625 139482286 STING1|NM_198282.4|overlapping|CTG 0 - 139481625 139481625 0,0,0  2 79,77, 0,584,
chr5 139482658 139482682 STING1|NM_198282.4|non-overlapping|ATG 0 - 139482658 139482658 0,0,0  1 24, 0,
chr5 139482678 139482702 STING1|NM_198282.4|non-overlapping|CTG 0 - 139482678 139482678 0,0,0  1 24, 0,
chr5 140691270 140691357 HARS|NM_002109.6|overlapping|CTG 0 - 140691270 140691270 0,0,0  1 87, 0,
chr5 142319764 142324870 SPRY4|NM_030964.5|non-overlapping|ATG 0 - 142319764 142319764 0,0,0  2 30,27, 0,5079,
chr5 143434612 143434690 NR3C1|NM_001018077.1|non-overlapping|ATG 0 - 143434612 143434612 0,0,0  1 78, 0,
chr5 147831573 147831597 SPINK1|NM_003122.5|overlapping|CTG 0 - 147831573 147831573 0,0,0  1 24, 0,
chr5 149062982 149063033 SH3TC2|NM_024577.4|overlapping|ATG 0 - 149062982 149062982 0,0,0  1 51, 0,
chr5 149062982 149063069 SH3TC2|NM_024577.4|overlapping|CTG 0 - 149062982 149062982 0,0,0  1 87, 0,
chr5 149052236 149063089 SH3TC2|NM_024577.4|overlapping|CTG 0 - 149052236 149052236 0,0,0  2 4,119, 0,10734,
chr5 150155629 150155644 PDGFRB|NM_002609.4|non-overlapping|ATG 0 - 150155629 150155629 0,0,0  1 15, 0,
chr5 150155565 150155706 PDGFRB|NM_002609.4|non-overlapping|CTG 0 - 150155565 150155565 0,0,0  1 141, 0,
chr5 150155629 150155788 PDGFRB|NM_002609.4|non-overlapping|TTG 0 - 150155629 150155629 0,0,0  1 159, 0,
chr5 161546672 161546708 GABRB2|NM_021911.3|non-overlapping|CTG 0 - 161546672 161546672 0,0,0  1 36, 0,
chr5 161546695 161546734 GABRB2|NM_021911.3|non-overlapping|ATG 0 - 161546695 161546695 0,0,0  1 39, 0,
chr5 170385449 170389290 KCNMB1|NM_004137.4|non-overlapping|CTG 0 - 170385449 170385449 0,0,0  2 22,32, 0,3809,
chr6  10414987  10415011 TFAP2A|NM_001372066.1|overlapping|ATA 0 -  10414987  10414987 0,0,0  1 24, 0,
chr6  10414962  10415034 TFAP2A|NM_001372066.1|overlapping|TTG 0 -  10414962  10414962 0,0,0  1 72, 0,
chr6  16485976  16486021 ATXN1|NM_000332.3|non-overlapping|ATG 0 -  16485976  16485976 0,0,0  1 45, 0,
chr6  16585901  16657802 ATXN1|NM_000332.3|non-overlapping|ATG 0 -  16585901  16585901 0,0,0  2 6,27, 0,71874,
chr6  16657854  16657887 ATXN1|NM_000332.3|non-overlapping|GTG 0 -  16657854  16657854 0,0,0  1 33, 0,
chr6  16657886  16761448 ATXN1|NM_000332.3|non-overlapping|GTG 0 -  16657886  16657886 0,0,0  4 15,115,49,151, 0,95346,96156,103411,
chr6  53041265  53041385 ICK|NM_016513.5|non-overlapping|ATG 0 -  53041265  53041265 0,0,0  1 120, 0,
chr6  53060936  53061641 ICK|NM_016513.5|non-overlapping|CTG 0 -  53060936  53060936 0,0,0  2 110,46, 0,659,
chr6  53061700  53061772 ICK|NM_016513.5|non-overlapping|ATG 0 -  53061700  53061700 0,0,0  1 72, 0,
chr6  53295685  53348920 ELOVL5|NM_021814.5|overlapping|GTG 0 -  53295685  53295685 0,0,0  2 22,104, 0,53131,
chr6  75202807  75202819 COL12A1|NM_004370.6|non-overlapping|ATG 0 -  75202807  75202807 0,0,0  1 12, 0,
chr6  75202781  75205991 COL12A1|NM_004370.6|overlapping|ATC 0 -  75202781  75202781 0,0,0  2 46,215, 0,2995,
chr6  79078164  79078191 PHIP|NM_017934.7|non-overlapping|ATG 0 -  79078164  79078164 0,0,0  1 27, 0,
chr6  79947250  79947325 ELOVL4|NM_022726.4|overlapping|CTG 0 -  79947250  79947250 0,0,0  1 75, 0,
chr6  79947386  79947467 ELOVL4|NM_022726.4|non-overlapping|TTG 0 -  79947386  79947386 0,0,0  1 81, 0,
chr6  79947386  79947530 ELOVL4|NM_022726.4|non-overlapping|CTG 0 -  79947386  79947386 0,0,0  1 144, 0,
chr6  90586828  90586975 MAP3K7|NM_145331.3|overlapping|CTG 0 -  90586828  90586828 0,0,0  1 147, 0,
chr6  90586828  90587011 MAP3K7|NM_145331.3|overlapping|ACG 0 -  90586828  90586828 0,0,0  1 183, 0,
chr6  90586828  90587035 MAP3K7|NM_145331.3|overlapping|GTG 0 -  90586828  90586828 0,0,0  1 207, 0,
chr6 107957980 107958052 SEC63|NM_007214.5|overlapping|GTG 0 - 107957980 107957980 0,0,0  1 72, 0,
chr6 107957927 107958110 SEC63|NM_007214.5|overlapping|GTG 0 - 107957927 107957927 0,0,0  1 183, 0,
chr6 139374474 139374486 CITED2|NM_006079.5|non-overlapping|ATG 0 - 139374474 139374474 0,0,0  1 12, 0,
chr6 139373928 139374529 CITED2|NM_006079.5|overlapping|ATC 0 - 139373928 139373928 0,0,0  2 24,117, 0,484,
chr6 139373928 139374577 CITED2|NM_006079.5|overlapping|ACG 0 - 139373928 139373928 0,0,0  2 24,165, 0,484,
chr6 142774761 142774791 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142774761 142774761 0,0,0  1 30, 0,
chr6 142774940 142774961 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142774940 142774940 0,0,0  1 21, 0,
chr6 142775078 142776174 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142775078 142775078 0,0,0  2 47,28, 0,1068,
chr6 142775078 142783548 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142775078 142775078 0,0,0  3 47,45,28, 0,1068,8442,
chr6 142783547 142783598 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142783547 142783547 0,0,0  1 51, 0,
chr6 142836948 142836957 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142836948 142836948 0,0,0  1 9, 0,
chr6 142836998 142837019 HIVEP2|NM_006734.4|non-overlapping|ATA 0 - 142836998 142836998 0,0,0  1 21, 0,
chr7   2958532   2958544 CARD11|NM_032415.7|non-overlapping|ATG 0 -   2958532   2958532 0,0,0  1 12, 0,
chr7   2958516   2958609 CARD11|NM_032415.7|non-overlapping|ATG 0 -   2958516   2958516 0,0,0  1 93, 0,
chr7   3043675   3043855 CARD11|NM_032415.7|non-overlapping|CTG 0 -   3043675   3043675 0,0,0  1 180, 0,
chr7   2958516   3043893 CARD11|NM_032415.7|non-overlapping|ATG 0 -   2958516   2958516 0,0,0  2 115,227, 0,85150,
chr7   5529393   5530558 ACTB|NM_001101.5|overlapping|TTG 0 -   5529393   5529393 0,0,0  3 7,129,35, 0,141,1130,
chr7  19116712  19117384 TWIST1|NM_000474.4|CDS_extension|CTG 0 -  19116712  19116712 0,0,0  1 672, 0,
chr7  19117380  19117392 TWIST1|NM_000474.4|non-overlapping|CTG 0 -  19117380  19117380 0,0,0  1 12, 0,
chr7  25124111  25125219 CYCS|NM_018947.6|overlapping|GTG 0 -  25124111  25124111 0,0,0  2 16,20, 0,1088,
chr7  25124111  25125249 CYCS|NM_018947.6|overlapping|ACG 0 -  25124111  25124111 0,0,0  2 16,50, 0,1088,
chr7  27185151  27185187 HOXA11|NM_005523.6|non-overlapping|ATG 0 -  27185151  27185151 0,0,0  1 36, 0,
chr7  42223218  42223266 GLI3|NM_000168.6|overlapping|ATG 0 -  42223218  42223218 0,0,0  1 48, 0,
chr7  42236988  42237009 GLI3|NM_000168.6|non-overlapping|ATG 0 -  42236988  42236988 0,0,0  1 21, 0,
chr7  56106429  56106456 CHCHD2|NM_016139.4|non-overlapping|GTG 0 -  56106429  56106429 0,0,0  1 27, 0,
chr7  76330216  76358848 YWHAG|NM_012479.4|overlapping|GTG 0 -  76330216  76330216 0,0,0  2 17,127, 0,28505,
chr7  76330216  76358890 YWHAG|NM_012479.4|overlapping|TTG 0 -  76330216  76330216 0,0,0  2 17,169, 0,28505,
chr7  76330216  76358914 YWHAG|NM_012479.4|overlapping|CTG 0 -  76330216  76330216 0,0,0  2 17,193, 0,28505,
chr7  83648662  83648689 SEMA3E|NM_012431.3|non-overlapping|ATG 0 -  83648662  83648662 0,0,0  1 27, 0,
chr7  83648741  83648792 SEMA3E|NM_012431.3|non-overlapping|ATG 0 -  83648741  83648741 0,0,0  1 51, 0,
chr7  84194717  84194729 SEMA3A|NM_006080.3|non-overlapping|ATG 0 -  84194717  84194717 0,0,0  1 12, 0,
chr7  92244976  92245006 KRIT1|NM_194456.1|non-overlapping|ATG 0 -  92244976  92244976 0,0,0  1 30, 0,
chr7  92244999  92245056 KRIT1|NM_194456.1|non-overlapping|ATG 0 -  92244999  92244999 0,0,0  1 57, 0,
chr7  92244999  92245110 KRIT1|NM_194456.1|non-overlapping|GTG 0 -  92244999  92244999 0,0,0  1 111, 0,
chr7  92245018  92245144 KRIT1|NM_194456.1|non-overlapping|ATG 0 -  92245018  92245018 0,0,0  1 126, 0,
chr7  92245930  92246014 KRIT1|NM_194456.1|non-overlapping|GTG 0 -  92245930  92245930 0,0,0  1 84, 0,
chr7  93106080  93114835 SAMD9|NM_017654.4|overlapping|CTG 0 -  93106080  93106080 0,0,0  2 25,41, 0,8714,
chr7  93114863  93114884 SAMD9|NM_017654.4|non-overlapping|ATG 0 -  93114863  93114863 0,0,0  1 21, 0,
chr7  93117884  93117908 SAMD9|NM_017654.4|non-overlapping|ATG 0 -  93117884  93117884 0,0,0  1 24, 0,
chr7  93148220  93148292 SAMD9L|NM_152703.5|non-overlapping|ATG 0 -  93148220  93148220 0,0,0  1 72, 0,
chr7 100827149 100827164 EPHB4|NM_004444.5|non-overlapping|ATG 0 - 100827149 100827149 0,0,0  1 15, 0,
chr7 100824239 100827286 EPHB4|NM_004444.5|overlapping|ACG 0 - 100824239 100824239 0,0,0  2 34,308, 0,2739,
chr7 100824239 100827427 EPHB4|NM_004444.5|overlapping|ATC 0 - 100824239 100824239 0,0,0  2 34,449, 0,2739,
chr7 120857882 120857927 TSPAN12|NM_012338.4|non-overlapping|ATG 0 - 120857882 120857882 0,0,0  1 45, 0,
chr7 124898292 124898316 POT1|NM_015450.3|non-overlapping|ATG 0 - 124898292 124898292 0,0,0  1 24, 0,
chr7 124898354 124928937 POT1|NM_015450.3|non-overlapping|ATG 0 - 124898354 124898354 0,0,0  3 20,73,123, 0,17219,30460,
chr7 124928938 124928953 POT1|NM_015450.3|non-overlapping|GTG 0 - 124928938 124928938 0,0,0  1 15, 0,
chr7 129054849 129054888 TNPO3|NM_012470.4|non-overlapping|ATG 0 - 129054849 129054849 0,0,0  1 39, 0,
chr7 129054955 129054970 TNPO3|NM_012470.4|non-overlapping|CTG 0 - 129054955 129054955 0,0,0  1 15, 0,
chr7 129054955 129055027 TNPO3|NM_012470.4|non-overlapping|ATC 0 - 129054955 129054955 0,0,0  1 72, 0,
chr7 129055005 129055041 TNPO3|NM_012470.4|non-overlapping|ACG 0 - 129055005 129055005 0,0,0  1 36, 0,
chr7 129055061 129055073 TNPO3|NM_012470.4|non-overlapping|ATA 0 - 129055061 129055061 0,0,0  1 12, 0,
chr7 129055069 129055093 TNPO3|NM_012470.4|non-overlapping|CTG 0 - 129055069 129055069 0,0,0  1 24, 0,
chr7 140924690 140924873 BRAF|NM_004333.6|overlapping|GTG 0 - 140924690 140924690 0,0,0  1 183, 0,
chr7 148847300 148884188 EZH2|NM_004456.5|non-overlapping|ACG 0 - 148847300 148847300 0,0,0  2 5,25, 0,36863,
chr7 148807645 148884201 EZH2|NM_004456.5|CDS_extension|ACG 0 - 148807645 148807645 0,0,0 20 61,85,81,82,96,179,126,41,95,170,241,92,179,103,141,121,117,129,124,38, 0,1425,1664,2687,3979,6313,7268,7860,9038,9576,10231,11950,18808,19518,21094,22082,24988,38824,39536,76518,
chr7 150977973 150978045 KCNH2|NM_172056.2|non-overlapping|TTG 0 - 150977973 150977973 0,0,0  1 72, 0,
chr7 150974839 150978251 KCNH2|NM_172056.2|overlapping|GTG 0 - 150974839 150974839 0,0,0  2 102,414, 0,2998,
chr7 152435891 152435984 KMT2C|NM_170606.3|non-overlapping|ATG 0 - 152435891 152435891 0,0,0  1 93, 0,
chr7 156892999 156893047 LMBR1|NM_022458.4|non-overlapping|ATG 0 - 156892999 156892999 0,0,0  1 48, 0,
chr7 156826733 156893115 LMBR1|NM_022458.4|overlapping|ACG 0 - 156826733 156826733 0,0,0  4 11,40,73,188, 0,7019,10079,66194,
chr7 156833788 156893138 LMBR1|NM_022458.4|overlapping|GTG 0 - 156833788 156833788 0,0,0  3 4,73,211, 0,3024,59139,
chr7 156893163 156893175 LMBR1|NM_022458.4|non-overlapping|CTG 0 - 156893163 156893163 0,0,0  1 12, 0,
chr7 157010497 157010515 MNX1|NM_005515.4|non-overlapping|ATG 0 - 157010497 157010497 0,0,0  1 18, 0,
chr7 157010497 157010566 MNX1|NM_005515.4|non-overlapping|TTG 0 - 157010497 157010497 0,0,0  1 69, 0,
chr7 157010463 157010574 MNX1|NM_005515.4|non-overlapping|GTG 0 - 157010463 157010463 0,0,0  1 111, 0,
chr8  11853368  11868042 CTSB|NM_001908.5|overlapping|CTG 0 -  11853368  11853368 0,0,0  2 111,42, 0,14632,
chr8  11853368  11868057 CTSB|NM_001908.5|overlapping|ACG 0 -  11853368  11853368 0,0,0  2 111,57, 0,14632,
chr8  11852664  11868085 CTSB|NM_001908.5|overlapping|CTG 0 -  11852664  11852664 0,0,0  3 31,151,85, 0,664,15336,
chr8  22130603  22130708 HR|NM_005144.5|non-overlapping|ATG 0 -  22130603  22130603 0,0,0  1 105, 0,
chr8  22130943  22130994 HR|NM_005144.5|non-overlapping|ATG 0 -  22130943  22130943 0,0,0  1 51, 0,
chr8  38457459  38457486 FGFR1|NM_023110.3|non-overlapping|ATG 0 -  38457459  38457459 0,0,0  1 27, 0,
chr8  38457459  38457492 FGFR1|NM_023110.3|non-overlapping|ATG 0 -  38457459  38457459 0,0,0  1 33, 0,
chr8  38468283  38468310 FGFR1|NM_023110.3|non-overlapping|ATG 0 -  38468283  38468283 0,0,0  1 27, 0,
chr8  38468283  38468352 FGFR1|NM_023110.3|non-overlapping|CTG 0 -  38468283  38468283 0,0,0  1 69, 0,
chr8  38468283  38468469 FGFR1|NM_023110.3|non-overlapping|TTG 0 -  38468283  38468283 0,0,0  1 186, 0,
chr8  38468473  38468503 FGFR1|NM_023110.3|non-overlapping|ACG 0 -  38468473  38468473 0,0,0  1 30, 0,
chr8  42048970  42049000 KAT6A|NM_006766.5|overlapping|ATG 0 -  42048970  42048970 0,0,0  1 30, 0,
chr8  42049036  42049045 KAT6A|NM_006766.5|non-overlapping|ATG 0 -  42049036  42049036 0,0,0  1 9, 0,
chr8  42049007  42049085 KAT6A|NM_006766.5|non-overlapping|ATG 0 -  42049007  42049007 0,0,0  1 78, 0,
chr8  42049150  42049225 KAT6A|NM_006766.5|non-overlapping|ATG 0 -  42049150  42049150 0,0,0  1 75, 0,
chr8  42049296  42051975 KAT6A|NM_006766.5|non-overlapping|ATG 0 -  42049296  42049296 0,0,0  2 6,75, 0,2604,
chr8  42472540  42472615 SLC20A2|NM_006749.5|non-overlapping|ATG 0 -  42472540  42472540 0,0,0  1 75, 0,
chr8  42839351  42843155 THAP1|NM_018105.3|overlapping|CTG 0 -  42839351  42839351 0,0,0  2 30,132, 0,3672,
chr8  42839351  42843176 THAP1|NM_018105.3|overlapping|ATC 0 -  42839351  42839351 0,0,0  2 30,153, 0,3672,
chr8  42843151  42843205 THAP1|NM_018105.3|non-overlapping|TTG 0 -  42843151  42843151 0,0,0  1 54, 0,
chr8  42843239  42843287 THAP1|NM_018105.3|non-overlapping|ATG 0 -  42843239  42843239 0,0,0  1 48, 0,
chr8  42843265  42843301 THAP1|NM_018105.3|non-overlapping|ATG 0 -  42843265  42843265 0,0,0  1 36, 0,
chr8  42896501  42896513 RNF170|NM_001160223.2|non-overlapping|CTG 0 -  42896501  42896501 0,0,0  1 12, 0,
chr8  42896400  42896544 RNF170|NM_001160223.2|non-overlapping|CTG 0 -  42896400  42896400 0,0,0  1 144, 0,
chr8  48921329  48921338 SNAI2|NM_003068.5|non-overlapping|ATG 0 -  48921329  48921329 0,0,0  1 9, 0,
chr8  74320952  74321351 JPH1|NM_020647.4|overlapping|CTG 0 -  74320952  74320952 0,0,0  1 399, 0,
chr8 115623692 115668610 TRPS1|NM_014112.5|non-overlapping|ATG 0 - 115623692 115623692 0,0,0  2 66,66, 0,44852,
chr8 115668812 115668884 TRPS1|NM_014112.5|non-overlapping|CTG 0 - 115668812 115668812 0,0,0  1 72, 0,
chr8 115668957 115668972 TRPS1|NM_014112.5|non-overlapping|ATG 0 - 115668957 115668957 0,0,0  1 15, 0,
chr8 118111228 118111255 EXT1|NM_000127.3|non-overlapping|ATG 0 - 118111228 118111228 0,0,0  1 27, 0,
chr8 118111228 118111342 EXT1|NM_000127.3|non-overlapping|ATG 0 - 118111228 118111228 0,0,0  1 114, 0,
chr8 118111551 118111560 EXT1|NM_000127.3|non-overlapping|ATG 0 - 118111551 118111551 0,0,0  1 9, 0,
chr8 118111551 118111599 EXT1|NM_000127.3|non-overlapping|ATG 0 - 118111551 118111551 0,0,0  1 48, 0,
chr8 118111543 118111621 EXT1|NM_000127.3|non-overlapping|CTG 0 - 118111543 118111543 0,0,0  1 78, 0,
chr8 118111543 118111630 EXT1|NM_000127.3|non-overlapping|TTG 0 - 118111543 118111543 0,0,0  1 87, 0,
chr8 118111583 118111769 EXT1|NM_000127.3|non-overlapping|CTG 0 - 118111583 118111583 0,0,0  1 186, 0,
chr8 118621831 118621840 SAMD12|NM_207506.3|non-overlapping|ATG 0 - 118621831 118621831 0,0,0  1 9, 0,
chr8 118621820 118621844 SAMD12|NM_207506.3|non-overlapping|ATG 0 - 118621820 118621820 0,0,0  1 24, 0,
chr8 118621903 118621909 SAMD12|NM_207506.3|non-overlapping|ATT 0 - 118621903 118621903 0,0,0  1 6, 0,
chr8 118580875 118621911 SAMD12|NM_207506.3|overlapping|ATA 0 - 118580875 118580875 0,0,0  2 18,108, 0,40928,
chr8 118621820 118621931 SAMD12|NM_207506.3|non-overlapping|CTG 0 - 118621820 118621820 0,0,0  1 111, 0,
chr8 125083951 125084014 WASHC5|NM_014846.4|non-overlapping|ATG 0 - 125083951 125083951 0,0,0  1 63, 0,
chr8 125091617 125091698 WASHC5|NM_014846.4|non-overlapping|TTG 0 - 125091617 125091617 0,0,0  1 81, 0,
chr8 125083951 125091723 WASHC5|NM_014846.4|non-overlapping|CTG 0 - 125083951 125083951 0,0,0  2 71,109, 0,7663,
chr8 132480833 132480923 KCNQ3|NM_004519.4|non-overlapping|ATG 0 - 132480833 132480833 0,0,0  1 90, 0,
chr8 143730389 143733725 FAM83H|NM_198488.5|overlapping|CTG 0 - 143730389 143730389 0,0,0  2 208,35, 0,3301,
chr9  14313520  14313577 NFIB|NM_001190737.2|non-overlapping|ATG 0 -  14313520  14313520 0,0,0  1 57, 0,
chr9  14313573  14313585 NFIB|NM_001190737.2|non-overlapping|ATG 0 -  14313573  14313573 0,0,0  1 12, 0,
chr9  14313581  14313596 NFIB|NM_001190737.2|non-overlapping|ATG 0 -  14313581  14313581 0,0,0  1 15, 0,
chr9  14314037  14314109 NFIB|NM_001190737.2|non-overlapping|ATG 0 -  14314037  14314037 0,0,0  1 72, 0,
chr9  27567119  27567128 C9orf72|NM_018325.5|non-overlapping|ATG 0 -  27567119  27567119 0,0,0  1 9, 0,
chr9  27567136  27567142 C9orf72|NM_018325.5|non-overlapping|ATG 0 -  27567136  27567136 0,0,0  1 6, 0,
chr9  35068350  35072417 VCP|NM_007126.5|overlapping|TTG 0 -  35068350  35068350 0,0,0  2 12,81, 0,3986,
chr9  35068350  35072450 VCP|NM_007126.5|overlapping|CTG 0 -  35068350  35068350 0,0,0  2 12,114, 0,3986,
chr9  35068350  35072474 VCP|NM_007126.5|overlapping|TTG 0 -  35068350  35068350 0,0,0  2 12,138, 0,3986,
chr9  35072401  35072533 VCP|NM_007126.5|non-overlapping|TTG 0 -  35072401  35072401 0,0,0  1 132, 0,
chr9  35068350  35072561 VCP|NM_007126.5|overlapping|CTG 0 -  35068350  35068350 0,0,0  2 12,225, 0,3986,
chr9  35689783  35689894 TPM2|NM_003289.4|overlapping|GTG 0 -  35689783  35689783 0,0,0  1 111, 0,
chr9  35689783  35689903 TPM2|NM_003289.4|overlapping|CTG 0 -  35689783  35689783 0,0,0  1 120, 0,
chr9  83980502  83980583 HNRNPK|NM_002140.5|non-overlapping|CTG 0 -  83980502  83980502 0,0,0  1 81, 0,
chr9  91775782  91950028 ROR2|NM_004560.4|overlapping|GTG 0 -  91775782  91775782 0,0,0  2 36,162, 0,174084,
chr9  91949991  91950090 ROR2|NM_004560.4|non-overlapping|AAG 0 -  91949991  91949991 0,0,0  1 99, 0,
chr9  91950037  91950148 ROR2|NM_004560.4|non-overlapping|GTG 0 -  91950037  91950037 0,0,0  1 111, 0,
chr9  92764628  92764772 BICD2|NM_001003800.2|overlapping|GTG 0 -  92764628  92764628 0,0,0  1 144, 0,
chr9  92764628  92764802 BICD2|NM_001003800.2|overlapping|CTG 0 -  92764628  92764628 0,0,0  1 174, 0,
chr9 115091119 115091134 TNC|NM_002160.4|non-overlapping|ATC 0 - 115091119 115091119 0,0,0  1 15, 0,
chr9 115118001 115118097 TNC|NM_002160.4|non-overlapping|GTG 0 - 115118001 115118001 0,0,0  1 96, 0,
chr9 127843185 127854393 ENG|NM_001114753.3|overlapping|AGG 0 - 127843185 127843185 0,0,0  2 60,105, 0,11103,
chr9 127854386 127854401 ENG|NM_001114753.3|non-overlapping|CTG 0 - 127854386 127854386 0,0,0  1 15, 0,
chr9 127854386 127854494 ENG|NM_001114753.3|non-overlapping|CTG 0 - 127854386 127854386 0,0,0  1 108, 0,
chr9 129824081 129824102 TOR1A|NM_000113.3|overlapping|GTG 0 - 129824081 129824081 0,0,0  1 21, 0,
chr9 132353661 132353718 SETX|NM_015046.7|non-overlapping|ATG 0 - 132353661 132353661 0,0,0  1 57, 0,
chr9 132353680 132353722 SETX|NM_015046.7|non-overlapping|ATG 0 - 132353680 132353680 0,0,0  1 42, 0,
chr9 132354939 132354954 SETX|NM_015046.7|non-overlapping|ATG 0 - 132354939 132354939 0,0,0  1 15, 0,
chr9 132944572 132944605 TSC1|NM_000368.5|non-overlapping|ATG 0 - 132944572 132944572 0,0,0  1 33, 0,
chr9 137459131 137459278 NSMF|NM_015537.5|non-overlapping|ATG 0 - 137459131 137459131 0,0,0  1 147, 0,
chr10  27100344  27100359 ANKRD26|NM_014915.3|non-overlapping|ATG 0 -  27100344  27100344 0,0,0  1 15, 0,
chr10  27100373  27100397 ANKRD26|NM_014915.3|non-overlapping|ATG 0 -  27100373  27100373 0,0,0  1 24, 0,
chr10  27100309  27100453 ANKRD26|NM_014915.3|overlapping|ATT 0 -  27100309  27100309 0,0,0  1 144, 0,
chr10  49532714  49539027 ERCC6|NM_000124.4|overlapping|CTG 0 -  49532714  49532714 0,0,0  2 264,66, 0,6247,
chr10  62815961  62816081 EGR2|NM_000399.5|overlapping|CTG 0 -  62815961  62815961 0,0,0  1 120, 0,
chr10  62816237  62816288 EGR2|NM_000399.5|non-overlapping|CTG 0 -  62816237  62816237 0,0,0  1 51, 0,
chr10  62816237  62816309 EGR2|NM_000399.5|non-overlapping|ATA 0 -  62816237  62816237 0,0,0  1 72, 0,
chr10  62816237  62816321 EGR2|NM_000399.5|non-overlapping|CTG 0 -  62816237  62816237 0,0,0  1 84, 0,
chr10  68470103  68471922 DNA2|NM_001080449.3|overlapping|GTG 0 -  68470103  68470103 0,0,0  2 60,132, 0,1687,
chr10  87094501  87094810 GLUD1|NM_005271.5|overlapping|CTG 0 -  87094501  87094501 0,0,0  1 309, 0,
chr10  95643097  95656608 ALDH18A1|NM_002860.4|overlapping|GTG 0 -  95643097  95643097 0,0,0  3 109,116,12, 0,10192,13499,
chr10  95653370  95656699 ALDH18A1|NM_002860.4|overlapping|GTG 0 -  95653370  95653370 0,0,0  2 35,103, 0,3226,
chr10 102705412 102714324 ARL3|NM_004311.4|overlapping|ACG 0 - 102705412 102705412 0,0,0  2 77,52, 0,8860,
chr10 102705412 102714330 ARL3|NM_004311.4|overlapping|CTG 0 - 102705412 102705412 0,0,0  2 77,58, 0,8860,
chr10 121598112 121598148 FGFR2|NM_000141.5|non-overlapping|ATG 0 - 121598112 121598112 0,0,0  1 36, 0,
chr10 121593964 121598222 FGFR2|NM_000141.5|non-overlapping|TTG 0 - 121593964 121593964 0,0,0  2 3,261, 0,3997,
chr10 121598197 121598263 FGFR2|NM_000141.5|non-overlapping|TTG 0 - 121598197 121598197 0,0,0  1 66, 0,
chr10 121598197 121598308 FGFR2|NM_000141.5|non-overlapping|CTG 0 - 121598197 121598197 0,0,0  1 111, 0,
chr10 121598246 121598348 FGFR2|NM_000141.5|non-overlapping|ATG 0 - 121598246 121598246 0,0,0  1 102, 0,
chr10 129963904 129963931 EBF3|NM_001005463.3|non-overlapping|ATG 0 - 129963904 129963904 0,0,0  1 27, 0,
chr10 129964060 129964075 EBF3|NM_001005463.3|non-overlapping|ATG 0 - 129964060 129964060 0,0,0  1 15, 0,
chr10 129964071 129964116 EBF3|NM_001005463.3|non-overlapping|ATC 0 - 129964071 129964071 0,0,0  1 45, 0,
chr10 129964071 129964167 EBF3|NM_001005463.3|non-overlapping|CTG 0 - 129964071 129964071 0,0,0  1 96, 0,
chr10 129964060 129964246 EBF3|NM_001005463.3|non-overlapping|GTG 0 - 129964060 129964060 0,0,0  1 186, 0,
chr11    534308    535504 HRAS|NM_176795.5|overlapping|ATG 0 -    534308    534308 0,0,0  2 67,89, 0,1107,
chr11   2133644   2138548 IGF2|NM_000612.6|overlapping|CTG 0 -   2133644   2133644 0,0,0  3 21,163,320, 0,1722,4584,
chr11   2138510   2138672 IGF2|NM_000612.6|non-overlapping|AAG 0 -   2138510   2138510 0,0,0  1 162, 0,
chr11   2133644   2138842 IGF2|NM_000612.6|overlapping|GTG 0 -   2133644   2133644 0,0,0  3 21,163,614, 0,1722,4584,
chr11   2885629   2885707 CDKN1C|NM_000076.2|non-overlapping|ATC 0 -   2885629   2885629 0,0,0  1 78, 0,
chr11   2885118   2885733 CDKN1C|NM_000076.2|overlapping|CTG 0 -   2885118   2885118 0,0,0  1 615, 0,
chr11   2885729   2885759 CDKN1C|NM_000076.2|non-overlapping|CTG 0 -   2885729   2885729 0,0,0  1 30, 0,
chr11  19192456  19201972 CSRP3|NM_003476.5|non-overlapping|ACG 0 -  19192456  19192456 0,0,0  2 20,19, 0,9497,
chr11  31806911  31810840 PAX6|NM_000280.5|non-overlapping|ATG 0 -  31806911  31806911 0,0,0  2 14,13, 0,3916,
chr11  31806907  31810920 PAX6|NM_000280.5|non-overlapping|GTG 0 -  31806907  31806907 0,0,0  2 18,93, 0,3920,
chr11  31806907  31810974 PAX6|NM_000280.5|non-overlapping|GTG 0 -  31806907  31806907 0,0,0  2 18,147, 0,3920,
chr11  61965501  61967501 FTH1|NM_002032.3|overlapping|CTG 0 -  61965501  61965501 0,0,0  2 14,190, 0,1810,
chr11  62705558  62706218 BSCL2|NM_032667.6|non-overlapping|ATG 0 -  62705558  62705558 0,0,0  2 59,16, 0,644,
chr11  62706202  62706277 BSCL2|NM_032667.6|non-overlapping|CTG 0 -  62706202  62706202 0,0,0  1 75, 0,
chr11  62707290  62707296 BSCL2|NM_001122955.4|non-overlapping|ATG 0 -  62707290  62707290 0,0,0  1 6, 0,
chr11  62707290  62707347 BSCL2|NM_001122955.4|non-overlapping|CTG 0 -  62707290  62707290 0,0,0  1 57, 0,
chr11  65557751  65558135 LTBP3|NM_001130144.3|overlapping|CTG 0 -  65557751  65557751 0,0,0  1 384, 0,
chr11  65557918  65558167 LTBP3|NM_001130144.3|overlapping|CTG 0 -  65557918  65557918 0,0,0  1 249, 0,
chr11  65557918  65558173 LTBP3|NM_001130144.3|overlapping|CTG 0 -  65557918  65557918 0,0,0  1 255, 0,
chr11  65557751  65558207 LTBP3|NM_001130144.3|overlapping|CTG 0 -  65557751  65557751 0,0,0  1 456, 0,
chr11  65557918  65558227 LTBP3|NM_001130144.3|overlapping|TTG 0 -  65557918  65557918 0,0,0  1 309, 0,
chr11  65662884  65662899 RELA|NM_021975.4|non-overlapping|ATG 0 -  65662884  65662884 0,0,0  1 15, 0,
chr11  68190008  68190104 KMT5B|NM_016028.4|overlapping|ATG 0 -  68190008  68190008 0,0,0  1 96, 0,
chr11  68190126  68190135 KMT5B|NM_016028.4|non-overlapping|ATT 0 -  68190126  68190126 0,0,0  1 9, 0,
chr11  68190104  68190143 KMT5B|NM_016028.4|non-overlapping|TTG 0 -  68190104  68190104 0,0,0  1 39, 0,
chr11  68190104  68213293 KMT5B|NM_016028.4|non-overlapping|TTG 0 -  68190104  68190104 0,0,0  2 48,156, 0,23033,
chr11  77392522  77473568 PAK1|NM_001128620.2|non-overlapping|CTG 0 -  77392522  77392522 0,0,0  2 19,17, 0,81029,
chr11  77473643  77473655 PAK1|NM_001128620.2|non-overlapping|GTG 0 -  77473643  77473643 0,0,0  1 12, 0,
chr11  77392538  77473812 PAK1|NM_001128620.2|non-overlapping|CTG 0 -  77392538  77392538 0,0,0  2 3,261, 0,81013,
chr11  77473651  77473855 PAK1|NM_001128620.2|non-overlapping|CTG 0 -  77473651  77473651 0,0,0  1 204, 0,
chr11  77473808  77473904 PAK1|NM_001128620.2|non-overlapping|ATT 0 -  77473808  77473808 0,0,0  1 96, 0,
chr11  86955259  86955304 FZD4|NM_012193.4|non-overlapping|ATG 0 -  86955259  86955259 0,0,0  1 45, 0,
chr11 118176560 118176581 SCN2B|NM_004588.5|non-overlapping|ATG 0 - 118176560 118176560 0,0,0  1 21, 0,
chr12   6341833   6341845 TNFRSF1A|NM_001065.4|non-overlapping|ATG 0 -   6341833   6341833 0,0,0  1 12, 0,
chr12   6334180   6341906 TNFRSF1A|NM_001065.4|overlapping|CTG 0 -   6334180   6334180 0,0,0  2 64,131, 0,7595,
chr12   6341823   6341922 TNFRSF1A|NM_001065.4|non-overlapping|AGG 0 -   6341823   6341823 0,0,0  1 99, 0,
chr12   6341823   6341955 TNFRSF1A|NM_001065.4|non-overlapping|ATG 0 -   6341823   6341823 0,0,0  1 132, 0,
chr12   6341823   6342000 TNFRSF1A|NM_001065.4|non-overlapping|CTG 0 -   6341823   6341823 0,0,0  1 177, 0,
chr12   6341823   6342024 TNFRSF1A|NM_001065.4|non-overlapping|ATT 0 -   6341823   6341823 0,0,0  1 201, 0,
chr12   6606433   6606439 CHD4|NM_001273.5|non-overlapping|GTG 0 -   6606433   6606433 0,0,0  1 6, 0,
chr12   6606326   6607315 CHD4|NM_001273.5|overlapping|CTG 0 -   6606326   6606326 0,0,0  2 125,16, 0,973,
chr12   6606326   6607342 CHD4|NM_001273.5|overlapping|GTG 0 -   6606326   6606326 0,0,0  2 125,43, 0,973,
chr12   9115893   9115911 A2M|NM_000014.6|non-overlapping|ATG 0 -   9115893   9115893 0,0,0  1 18, 0,
chr12  12266759  12266837 LRP6|NM_002336.3|non-overlapping|ATG 0 -  12266759  12266759 0,0,0  1 78, 0,
chr12  12266833  12266854 LRP6|NM_002336.3|non-overlapping|CTG 0 -  12266833  12266833 0,0,0  1 21, 0,
chr12  12266910  12266961 LRP6|NM_002336.3|non-overlapping|ATG 0 -  12266910  12266910 0,0,0  1 51, 0,
chr12  12266878  12267010 LRP6|NM_002336.3|non-overlapping|ATG 0 -  12266878  12266878 0,0,0  1 132, 0,
chr12  26124781  26124811 BHLHE41|NM_030762.3|non-overlapping|ATC 0 -  26124781  26124781 0,0,0  1 30, 0,
chr12  26124781  26124883 BHLHE41|NM_030762.3|non-overlapping|CTG 0 -  26124781  26124781 0,0,0  1 102, 0,
chr12  26124904  26124913 BHLHE41|NM_030762.3|non-overlapping|CTG 0 -  26124904  26124904 0,0,0  1 9, 0,
chr12  26124904  26125000 BHLHE41|NM_030762.3|non-overlapping|GTG 0 -  26124904  26124904 0,0,0  1 96, 0,
chr12  39443085  39443109 KIF21A|NM_017641.4|non-overlapping|ATG 0 -  39443085  39443085 0,0,0  1 24, 0,
chr12  47882747  47882762 VDR|NM_001017535.2|non-overlapping|CTG 0 -  47882747  47882747 0,0,0  1 15, 0,
chr12  47899905  47899926 VDR|NM_001017535.2|non-overlapping|ATG 0 -  47899905  47899905 0,0,0  1 21, 0,
chr12  48004400  48004412 COL2A1|NM_001844.5|non-overlapping|AGG 0 -  48004400  48004400 0,0,0  1 12, 0,
chr12  48004400  48004415 COL2A1|NM_001844.5|non-overlapping|ATG 0 -  48004400  48004400 0,0,0  1 15, 0,
chr12  48970343  48971512 WNT10B|NM_003394.4|overlapping|GTG 0 -  48970343  48970343 0,0,0  3 8,114,58, 0,112,1111,
chr12  48971560  48971572 WNT10B|NM_003394.4|non-overlapping|ATG 0 -  48971560  48971560 0,0,0  1 12, 0,
chr12  48971597  48971612 WNT10B|NM_003394.4|non-overlapping|CTG 0 -  48971597  48971597 0,0,0  1 15, 0,
chr12  48971511  48971661 WNT10B|NM_003394.4|non-overlapping|ATC 0 -  48971511  48971511 0,0,0  1 150, 0,
chr12  48971511  48971676 WNT10B|NM_003394.4|non-overlapping|TTG 0 -  48971511  48971511 0,0,0  1 165, 0,
chr12  48971669  48971717 WNT10B|NM_003394.4|non-overlapping|GTG 0 -  48971669  48971669 0,0,0  1 48, 0,
chr12  48971669  48971726 WNT10B|NM_003394.4|non-overlapping|CTG 0 -  48971669  48971669 0,0,0  1 57, 0,
chr12  49186631  49189008 TUBA1A|NM_006009.4|overlapping|ATC 0 -  49186631  49186631 0,0,0  2 202,32, 0,2345,
chr12  49189039  49189045 TUBA1A|NM_006009.4|non-overlapping|CTG 0 -  49189039  49189039 0,0,0  1 6, 0,
chr12  52520249  52520333 KRT5|NM_000424.4|overlapping|GTG 0 -  52520249  52520249 0,0,0  1 84, 0,
chr12  52520249  52520363 KRT5|NM_000424.4|overlapping|CTG 0 -  52520249  52520249 0,0,0  1 114, 0,
chr12  57752233  57752245 CDK4|NM_000075.4|non-overlapping|ATG 0 -  57752233  57752233 0,0,0  1 12, 0,
chr12  57752175  57752292 CDK4|NM_000075.4|non-overlapping|ATG 0 -  57752175  57752175 0,0,0  1 117, 0,
chr12  88580274  88580388 KITLG|NM_000899.5|overlapping|ATG 0 -  88580274  88580274 0,0,0  1 114, 0,
chr12  88580274  88580418 KITLG|NM_000899.5|overlapping|GTG 0 -  88580274  88580274 0,0,0  1 144, 0,
chr12  88580274  88580436 KITLG|NM_000899.5|overlapping|CTG 0 -  88580274  88580274 0,0,0  1 162, 0,
chr12  89352070  89352097 DUSP6|NM_001946.4|non-overlapping|ATG 0 -  89352070  89352070 0,0,0  1 27, 0,
chr12  89349253  89352147 DUSP6|NM_001946.4|CDS_extension|ATT 0 -  89349253  89349253 0,0,0  3 308,438,508, 0,1334,2386,
chr12  89352142  89352166 DUSP6|NM_001946.4|non-overlapping|TTG 0 -  89352142  89352142 0,0,0  1 24, 0,
chr12  89352142  89352229 DUSP6|NM_001946.4|non-overlapping|CTG 0 -  89352142  89352142 0,0,0  1 87, 0,
chr12  89352251  89352260 DUSP6|NM_001946.4|non-overlapping|ATT 0 -  89352251  89352251 0,0,0  1 9, 0,
chr12  89349253  89352282 DUSP6|NM_001946.4|CDS_extension|CTG 0 -  89349253  89349253 0,0,0  3 308,438,643, 0,1334,2386,
chr12  89349253  89352303 DUSP6|NM_001946.4|CDS_extension|CTG 0 -  89349253  89349253 0,0,0  3 308,438,664, 0,1334,2386,
chr12  89349253  89352333 DUSP6|NM_001946.4|CDS_extension|ACG 0 -  89349253  89349253 0,0,0  3 308,438,694, 0,1334,2386,
chr12  89352359  89352386 DUSP6|NM_001946.4|non-overlapping|TTG 0 -  89352359  89352359 0,0,0  1 27, 0,
chr12  89352334  89352427 DUSP6|NM_001946.4|non-overlapping|ATC 0 -  89352334  89352334 0,0,0  1 93, 0,
chr12  89352401  89352449 DUSP6|NM_001946.4|non-overlapping|ATA 0 -  89352401  89352401 0,0,0  1 48, 0,
chr12  89352426  89352462 DUSP6|NM_001946.4|non-overlapping|CTG 0 -  89352426  89352426 0,0,0  1 36, 0,
chr12  89352458  89352488 DUSP6|NM_001946.4|non-overlapping|CTG 0 -  89352458  89352458 0,0,0  1 30, 0,
chr12  91178555  91178564 DCN|NM_001920.5|non-overlapping|ATG 0 -  91178555  91178555 0,0,0  1 9, 0,
chr12  91182707  91182719 DCN|NM_001920.5|non-overlapping|CTG 0 -  91182707  91182707 0,0,0  1 12, 0,
chr12  91182799  91182808 DCN|NM_001920.5|non-overlapping|ATG 0 -  91182799  91182799 0,0,0  1 9, 0,
chr12 107092995 107093019 CRY1|NM_004075.5|non-overlapping|ATG 0 - 107092995 107092995 0,0,0  1 24, 0,
chr12 107093196 107093238 CRY1|NM_004075.5|non-overlapping|ATG 0 - 107093196 107093196 0,0,0  1 42, 0,
chr12 107093050 107093281 CRY1|NM_004075.5|non-overlapping|CTG 0 - 107093050 107093050 0,0,0  1 231, 0,
chr12 107093015 107093339 CRY1|NM_004075.5|non-overlapping|GTG 0 - 107093015 107093015 0,0,0  1 324, 0,
chr12 107093196 107093400 CRY1|NM_004075.5|non-overlapping|GTG 0 - 107093196 107093196 0,0,0  1 204, 0,
chr12 107093196 107093421 CRY1|NM_004075.5|non-overlapping|ATT 0 - 107093196 107093196 0,0,0  1 225, 0,
chr12 114683277 114683292 TBX3|NM_005996.4|non-overlapping|ATG 0 - 114683277 114683277 0,0,0  1 15, 0,
chr12 114683414 114683447 TBX3|NM_005996.4|non-overlapping|ATG 0 - 114683414 114683414 0,0,0  1 33, 0,
chr12 114683509 114683611 TBX3|NM_005996.4|non-overlapping|CTG 0 - 114683509 114683509 0,0,0  1 102, 0,
chr12 114683436 114683733 TBX3|NM_005996.4|non-overlapping|CTG 0 - 114683436 114683436 0,0,0  1 297, 0,
chr12 114683833 114683851 TBX3|NM_005996.4|non-overlapping|TTG 0 - 114683833 114683833 0,0,0  1 18, 0,
chr12 114683436 114683928 TBX3|NM_005996.4|non-overlapping|ATT 0 - 114683436 114683436 0,0,0  1 492, 0,
chr12 116277127 116277166 MED13L|NM_015335.5|overlapping|ATG 0 - 116277127 116277127 0,0,0  1 39, 0,
chr12 116277127 116277373 MED13L|NM_015335.5|overlapping|GTG 0 - 116277127 116277127 0,0,0  1 246, 0,
chr13  20143292  20160984 GJA3|NM_021954.4|non-overlapping|AAG 0 -  20143292  20143292 0,0,0  2 13,95, 0,17597,
chr13  20160964  20161033 GJA3|NM_021954.4|non-overlapping|ATG 0 -  20160964  20160964 0,0,0  1 69, 0,
chr13  36848675  36879824 SMAD9|NM_001127217.3|CDS_extension|TTG 0 -  36848675  36848675 0,0,0  6 144,257,222,111,258,547, 0,4743,16861,18597,23982,30602,
chr13  36879735  36879864 SMAD9|NM_001127217.3|non-overlapping|CTG 0 -  36879735  36879735 0,0,0  1 129, 0,
chr13  60132982  60163810 DIAPH3|NM_001042517.2|overlapping|CTG 0 -  60132982  60132982 0,0,0  2 7,224, 0,30604,
chr13  60132982  60163846 DIAPH3|NM_001042517.2|overlapping|CTG 0 -  60132982  60132982 0,0,0  2 7,260, 0,30604,
chr13  80337737  80340692 SPRY2|NM_005842.4|non-overlapping|CTG 0 -  80337737  80337737 0,0,0  2 19,71, 0,2884,
chr13  80337737  80340785 SPRY2|NM_005842.4|non-overlapping|CTG 0 -  80337737  80337737 0,0,0  2 19,164, 0,2884,
chr13  80340947  80340968 SPRY2|NM_005842.4|non-overlapping|CTG 0 -  80340947  80340947 0,0,0  1 21, 0,
chr13 101399133 101416340 NALCN|NM_052867.4|non-overlapping|ATG 0 - 101399133 101399133 0,0,0  2 32,28, 0,17179,
chr13 110242685 110307110 COL4A1|NM_001845.6|overlapping|AAG 0 - 110242685 110242685 0,0,0  2 49,167, 0,64258,
chr13 110307087 110307114 COL4A1|NM_001845.6|non-overlapping|CTG 0 - 110307087 110307087 0,0,0  1 27, 0,
chr14  21431758  21431794 CHD8|NM_001170629.2|non-overlapping|ATG 0 -  21431758  21431758 0,0,0  1 36, 0,
chr14  21431795  21431816 CHD8|NM_001170629.2|non-overlapping|ATG 0 -  21431795  21431795 0,0,0  1 21, 0,
chr14  21431828  21431840 CHD8|NM_001170629.2|non-overlapping|CTG 0 -  21431828  21431828 0,0,0  1 12, 0,
chr14  21431836  21431848 CHD8|NM_001170629.2|non-overlapping|ATC 0 -  21431836  21431836 0,0,0  1 12, 0,
chr14  23407579  23407591 MYH6|NM_002471.4|non-overlapping|GTG 0 -  23407579  23407579 0,0,0  1 12, 0,
chr14  23434212  23434218 MYH7|NM_000257.4|non-overlapping|CTG 0 -  23434212  23434212 0,0,0  1 6, 0,
chr14  23434202  23434220 MYH7|NM_000257.4|non-overlapping|ATC 0 -  23434202  23434202 0,0,0  1 18, 0,
chr14  23434202  23434235 MYH7|NM_000257.4|non-overlapping|TTG 0 -  23434202  23434202 0,0,0  1 33, 0,
chr14  24242404  24242488 TINF2|NM_001099274.3|non-overlapping|ATG 0 -  24242404  24242404 0,0,0  1 84, 0,
chr14  24242404  24242566 TINF2|NM_001099274.3|non-overlapping|CTG 0 -  24242404  24242404 0,0,0  1 162, 0,
chr14  29927508  29927595 PRKD1|NM_002742.3|overlapping|CTG 0 -  29927508  29927508 0,0,0  1 87, 0,
chr14  50204374  50231308 SOS2|NM_006939.4|overlapping|ATG 0 -  50204374  50204374 0,0,0  2 35,112, 0,26822,
chr14  50204374  50231494 SOS2|NM_006939.4|overlapping|CTG 0 -  50204374  50204374 0,0,0  2 35,298, 0,26822,
chr14  53952208  53953308 BMP4|NM_001202.6|overlapping|ATG 0 -  53952208  53952208 0,0,0  2 21,33, 0,1067,
chr14  53952208  53953353 BMP4|NM_001202.6|overlapping|CTG 0 -  53952208  53952208 0,0,0  2 21,78, 0,1067,
chr14  53953349  53956678 BMP4|NM_001202.6|non-overlapping|ATG 0 -  53953349  53953349 0,0,0  2 51,129, 0,3200,
chr14  53956698  53956740 BMP4|NM_001202.6|non-overlapping|CTG 0 -  53956698  53956698 0,0,0  1 42, 0,
chr14  53956698  53956752 BMP4|NM_001202.6|non-overlapping|GTG 0 -  53956698  53956698 0,0,0  1 54, 0,
chr14  56805457  56805505 OTX2|NM_172337.3|non-overlapping|CTG 0 -  56805457  56805457 0,0,0  1 48, 0,
chr14  60648995  60649232 SIX1|NM_005982.4|overlapping|CTG 0 -  60648995  60648995 0,0,0  1 237, 0,
chr14  60648924  60649239 SIX1|NM_005982.4|overlapping|CTG 0 -  60648924  60648924 0,0,0  1 315, 0,
chr14  60648995  60649313 SIX1|NM_005982.4|overlapping|TTG 0 -  60648995  60648995 0,0,0  1 318, 0,
chr14  60648924  60649353 SIX1|NM_005982.4|overlapping|TTG 0 -  60648924  60648924 0,0,0  1 429, 0,
chr14  60649300  60649411 SIX1|NM_005982.4|non-overlapping|CTG 0 -  60649300  60649300 0,0,0  1 111, 0,
chr14  64823090  64823135 SPTB|NM_001355436.2|overlapping|ATG 0 -  64823090  64823090 0,0,0  1 45, 0,
chr14  65102328  65102364 MAX|NM_002382.5|overlapping|GTG 0 -  65102328  65102328 0,0,0  1 36, 0,
chr14  65102328  65102412 MAX|NM_002382.5|overlapping|GTG 0 -  65102328  65102328 0,0,0  1 84, 0,
chr14  65102456  65102492 MAX|NM_002382.5|non-overlapping|TTG 0 -  65102456  65102456 0,0,0  1 36, 0,
chr14  65102472  65102508 MAX|NM_002382.5|non-overlapping|GTG 0 -  65102472  65102472 0,0,0  1 36, 0,
chr14  68979042  68979096 ACTN1|NM_001130004.2|overlapping|GTG 0 -  68979042  68979042 0,0,0  1 54, 0,
chr14  68979042  68979237 ACTN1|NM_001130004.2|overlapping|CTG 0 -  68979042  68979042 0,0,0  1 195, 0,
chr14  68925587  68979289 ACTN1|NM_001130004.2|overlapping|ATT 0 -  68925587  68925587 0,0,0  2 85,338, 0,53364,
chr14  68979284  68979299 ACTN1|NM_001130004.2|non-overlapping|GTG 0 -  68979284  68979284 0,0,0  1 15, 0,
chr14  77028549  77028597 IRF2BPL|NM_024496.4|non-overlapping|ATG 0 -  77028549  77028549 0,0,0  1 48, 0,
chr14  77028613  77028643 IRF2BPL|NM_024496.4|non-overlapping|ATC 0 -  77028613  77028613 0,0,0  1 30, 0,
chr14  77597345  77616607 SPTLC2|NM_004863.4|overlapping|CTG 0 -  77597345  77597345 0,0,0  2 35,160, 0,19102,
chr14  77616488  77616626 SPTLC2|NM_004863.4|overlapping|CTG 0 -  77616488  77616488 0,0,0  1 138, 0,
chr14  91947342  91947351 FBLN5|NM_006329.4|non-overlapping|CTG 0 -  91947342  91947342 0,0,0  1 9, 0,
chr14  95133474  95133483 DICER1|NM_177438.3|non-overlapping|ATG 0 -  95133474  95133474 0,0,0  1 9, 0,
chr14  95157288  95157339 DICER1|NM_177438.3|non-overlapping|ATG 0 -  95157288  95157288 0,0,0  1 51, 0,
chr14  95157377  95157386 DICER1|NM_177438.3|non-overlapping|ATG 0 -  95157377  95157377 0,0,0  1 9, 0,
chr14  99271229  99271241 BCL11B|NM_138576.4|non-overlapping|ATG 0 -  99271229  99271229 0,0,0  1 12, 0,
chr14  99257829  99271414 BCL11B|NM_138576.4|overlapping|ATA 0 -  99257829  99257829 0,0,0  2 10,254, 0,13331,
chr14  99271410  99271431 BCL11B|NM_138576.4|non-overlapping|ATA 0 -  99271410  99271410 0,0,0  1 21, 0,
chr14  99257829  99271495 BCL11B|NM_138576.4|overlapping|ATC 0 -  99257829  99257829 0,0,0  2 10,335, 0,13331,
chr14  99271562  99271574 BCL11B|NM_138576.4|non-overlapping|ATA 0 -  99271562  99271562 0,0,0  1 12, 0,
chr14  99271597  99271681 BCL11B|NM_138576.4|non-overlapping|GTG 0 -  99271597  99271597 0,0,0  1 84, 0,
chr14  99271607  99271691 BCL11B|NM_138576.4|non-overlapping|CTG 0 -  99271607  99271607 0,0,0  1 84, 0,
chr14 103711228 103711535 XRCC3|NM_005432.4|non-overlapping|CTG 0 - 103711228 103711228 0,0,0  2 17,70, 0,237,
chr14 104793202 104793262 AKT1|NM_005163.2|non-overlapping|ATG 0 - 104793202 104793202 0,0,0  1 60, 0,
chr15  23647725  23647758 MAGEL2|NM_019066.5|overlapping|CTG 0 -  23647725  23647725 0,0,0  1 33, 0,
chr15  23647725  23647782 MAGEL2|NM_019066.5|overlapping|CTG 0 -  23647725  23647725 0,0,0  1 57, 0,
chr15  23647725  23647803 MAGEL2|NM_019066.5|overlapping|CTG 0 -  23647725  23647725 0,0,0  1 78, 0,
chr15  25405481  25438608 UBE3A|NM_130838.4|non-overlapping|ATG 0 -  25405481  25405481 0,0,0  2 21,120, 0,33007,
chr15  25438952  25438976 UBE3A|NM_130838.4|non-overlapping|ATG 0 -  25438952  25438952 0,0,0  1 24, 0,
chr15  37099505  37099517 MEIS2|NM_170674.5|non-overlapping|CTG 0 -  37099505  37099505 0,0,0  1 12, 0,
chr15  42920628  42920757 TTBK2|NM_173500.4|non-overlapping|ATG 0 -  42920628  42920628 0,0,0  1 129, 0,
chr15  48644870  48645629 FBN1|NM_000138.5|non-overlapping|ACG 0 -  48644870  48644870 0,0,0  2 80,55, 0,704,
chr15  48644870  48645644 FBN1|NM_000138.5|non-overlapping|GTG 0 -  48644870  48644870 0,0,0  2 80,70, 0,704,
chr15  50686538  50686601 TRPM7|NM_017672.6|non-overlapping|ATG 0 -  50686538  50686538 0,0,0  1 63, 0,
chr15  51622671  51622719 DMXL2|NM_001174116.3|non-overlapping|ATG 0 -  51622671  51622671 0,0,0  1 48, 0,
chr15  58749573  58749588 ADAM10|NM_001110.4|non-overlapping|ATG 0 -  58749573  58749573 0,0,0  1 15, 0,
chr15  58717702  58749691 ADAM10|NM_001110.4|overlapping|GTG 0 -  58717702  58717702 0,0,0  2 25,212, 0,31777,
chr15  65185164  65185215 CLPX|NM_006660.5|non-overlapping|ATT 0 -  65185164  65185164 0,0,0  1 51, 0,
chr15  65185164  65185299 CLPX|NM_006660.5|non-overlapping|CTG 0 -  65185164  65185164 0,0,0  1 135, 0,
chr15  73368396  73368408 HCN4|NM_005477.3|non-overlapping|ATG 0 -  73368396  73368396 0,0,0  1 12, 0,
chr15  75430371  75430386 SIN3A|NM_001145358.2|overlapping|ATG 0 -  75430371  75430371 0,0,0  1 15, 0,
chr15  75430388  75451465 SIN3A|NM_001145358.2|non-overlapping|CTG 0 -  75430388  75430388 0,0,0  2 20,43, 0,21034,
chr15  75451479  75451515 SIN3A|NM_001145358.2|non-overlapping|CTG 0 -  75451479  75451479 0,0,0  1 36, 0,
chr15  75451537  75451549 SIN3A|NM_001145358.2|non-overlapping|GTG 0 -  75451537  75451537 0,0,0  1 12, 0,
chr15  75451445  75451580 SIN3A|NM_001145358.2|non-overlapping|CTG 0 -  75451445  75451445 0,0,0  1 135, 0,
chr15  75451537  75451654 SIN3A|NM_001145358.2|non-overlapping|ACG 0 -  75451537  75451537 0,0,0  1 117, 0,
chr15  82952644  82952665 HOMER2|NM_004839.4|non-overlapping|ATG 0 -  82952644  82952644 0,0,0  1 21, 0,
chr15  89333820  89333850 POLG|NM_002693.3|non-overlapping|GTG 0 -  89333820  89333820 0,0,0  1 30, 0,
chr15  89333820  89333892 POLG|NM_002693.3|non-overlapping|ATG 0 -  89333820  89333820 0,0,0  1 72, 0,
chr15  89330207  89334718 POLG|NM_002693.3|overlapping|CTG 0 -  89330207  89330207 0,0,0  3 69,818,46, 0,2888,4465,
chr15  89333820  89334729 POLG|NM_002693.3|non-overlapping|GTG 0 -  89333820  89333820 0,0,0  2 93,57, 0,852,
chr15  89330207  89334757 POLG|NM_002693.3|overlapping|CTG 0 -  89330207  89330207 0,0,0  3 69,818,85, 0,2888,4465,
chr15  89334749  89334782 POLG|NM_002693.3|non-overlapping|GTG 0 -  89334749  89334749 0,0,0  1 33, 0,
chr16   1474862   1475021 CLCN7|NM_001287.6|overlapping|ACG 0 -   1474862   1474862 0,0,0  1 159, 0,
chr16   3880277   3880298 CREBBP|NM_004380.3|non-overlapping|ATG 0 -   3880277   3880277 0,0,0  1 21, 0,
chr16   3880341   3880434 CREBBP|NM_004380.3|non-overlapping|TTG 0 -   3880341   3880341 0,0,0  1 93, 0,
chr16   3880277   3880688 CREBBP|NM_004380.3|non-overlapping|TTG 0 -   3880277   3880277 0,0,0  1 411, 0,
chr16  18790244  18790283 RPS15A|NM_001019.5|non-overlapping|ATT 0 -  18790244  18790244 0,0,0  1 39, 0,
chr16  23638125  23641201 PALB2|NM_024675.4|overlapping|CTG 0 -  23638125  23638125 0,0,0  2 4,92, 0,2984,
chr16  23641122  23641284 PALB2|NM_024675.4|overlapping|CTG 0 -  23641122  23641122 0,0,0  1 162, 0,
chr16  79599834  79600200 MAF|NM_005360.5|overlapping|CTG 0 -  79599834  79599834 0,0,0  1 366, 0,
chr16  79600434  79600446 MAF|NM_005360.5|non-overlapping|ATG 0 -  79600434  79600434 0,0,0  1 12, 0,
chr16  79600442  79600478 MAF|NM_005360.5|non-overlapping|AAG 0 -  79600442  79600442 0,0,0  1 36, 0,
chr16  79600518  79600524 MAF|NM_005360.5|non-overlapping|AGG 0 -  79600518  79600518 0,0,0  1 6, 0,
chr16  79600480  79600552 MAF|NM_005360.5|non-overlapping|CTG 0 -  79600480  79600480 0,0,0  1 72, 0,
chr16  88785011  88785050 PIEZO1|NM_001142864.4|non-overlapping|ATG 0 -  88785011  88785011 0,0,0  1 39, 0,
chr17   1684790   1684823 PRPF8|NM_006445.4|non-overlapping|ATT 0 -   1684790   1684790 0,0,0  1 33, 0,
chr17   1684790   1684832 PRPF8|NM_006445.4|non-overlapping|CTG 0 -   1684790   1684790 0,0,0  1 42, 0,
chr17   5584051   5584072 NLRP1|NM_033004.4|non-overlapping|ATG 0 -   5584051   5584051 0,0,0  1 21, 0,
chr17   5584288   5584309 NLRP1|NM_033004.4|non-overlapping|CTG 0 -   5584288   5584288 0,0,0  1 21, 0,
chr17   7676551   7687398 TP53|NM_000546.6|overlapping|GTG 0 -   7676551   7676551 0,0,0  2 71,22, 0,10825,
chr17   7676551   7687401 TP53|NM_000546.6|overlapping|ACG 0 -   7676551   7676551 0,0,0  2 71,25, 0,10825,
chr17   7676551   7687413 TP53|NM_000546.6|overlapping|GTG 0 -   7676551   7676551 0,0,0  2 71,37, 0,10825,
chr17   7687394   7687421 TP53|NM_000546.6|non-overlapping|CTG 0 -   7687394   7687394 0,0,0  1 27, 0,
chr17   7687477   7687513 TP53|NM_000546.6|non-overlapping|CTG 0 -   7687477   7687477 0,0,0  1 36, 0,
chr17   8377563   8383175 RPL26|NM_000987.5|CDS_extension|ATC 0 -   8377563   8377563 0,0,0  4 129,141,173,19, 0,2232,4579,5593,
chr17  17232803  17232866 FLCN|NM_144606.7|non-overlapping|ATG 0 -  17232803  17232803 0,0,0  1 63, 0,
chr17  17232803  17236954 FLCN|NM_144606.7|non-overlapping|CTG 0 -  17232803  17232803 0,0,0  2 98,43, 0,4108,
chr17  17237033  17237093 FLCN|NM_144606.7|non-overlapping|TTG 0 -  17237033  17237033 0,0,0  1 60, 0,
chr17  17237033  17237105 FLCN|NM_144606.7|non-overlapping|CTG 0 -  17237033  17237033 0,0,0  1 72, 0,
chr17  17237033  17237141 FLCN|NM_144606.7|non-overlapping|GTG 0 -  17237033  17237033 0,0,0  1 108, 0,
chr17  19977722  19977800 AKAP10|NM_007202.4|non-overlapping|ATG 0 -  19977722  19977722 0,0,0  1 78, 0,
chr17  41771859  41786650 JUP|NM_002230.4|non-overlapping|CTG 0 -  41771859  41771859 0,0,0  2 3,63, 0,14728,
chr17  41771810  41786667 JUP|NM_002230.4|overlapping|ACG 0 -  41771810  41771810 0,0,0  2 52,80, 0,14777,
chr17  41771810  41786700 JUP|NM_002230.4|overlapping|TTG 0 -  41771810  41771810 0,0,0  2 52,113, 0,14777,
chr17  42348526  42388409 STAT3|NM_139276.3|non-overlapping|CTG 0 -  42348526  42348526 0,0,0  2 13,131, 0,39752,
chr17  43124029  43125280 BRCA1|NM_007294.4|overlapping|CTG 0 -  43124029  43124029 0,0,0  2 86,10, 0,1241,
chr17  44216637  44218248 UBTF|NM_014233.4|overlapping|GTG 0 -  44216637  44216637 0,0,0  2 67,77, 0,1534,
chr17  44218225  44218273 UBTF|NM_014233.4|overlapping|TTG 0 -  44218225  44218225 0,0,0  1 48, 0,
chr17  44899379  44899397 EFTUD2|NM_004247.4|non-overlapping|CTG 0 -  44899379  44899379 0,0,0  1 18, 0,
chr17  46171959  46172169 KANSL1|NM_001193466.2|overlapping|CTG 0 -  46171959  46171959 0,0,0  1 210, 0,
chr17  50201515  50201524 COL1A1|NM_000088.4|non-overlapping|AGG 0 -  50201515  50201515 0,0,0  1 9, 0,
chr17  50201515  50201530 COL1A1|NM_000088.4|non-overlapping|ATG 0 -  50201515  50201515 0,0,0  1 15, 0,
chr17  50201557  50201572 COL1A1|NM_000088.4|non-overlapping|ATG 0 -  50201557  50201557 0,0,0  1 15, 0,
chr17  58417280  58417301 RNF43|NM_017763.6|non-overlapping|ATG 0 -  58417280  58417280 0,0,0  1 21, 0,
chr17  58417413  58417464 RNF43|NM_017763.6|non-overlapping|ATG 0 -  58417413  58417413 0,0,0  1 51, 0,
chr17  58417506  58417518 RNF43|NM_017763.6|non-overlapping|TTG 0 -  58417506  58417506 0,0,0  1 12, 0,
chr17  61861552  61861561 BRIP1|NM_032043.3|non-overlapping|CTG 0 -  61861552  61861552 0,0,0  1 9, 0,
chr17  61861557  61863307 BRIP1|NM_032043.3|non-overlapping|TTG 0 -  61861557  61861557 0,0,0  2 12,24, 0,1726,
chr17  61861565  61863327 BRIP1|NM_032043.3|non-overlapping|GTG 0 -  61861565  61861565 0,0,0  2 4,44, 0,1718,
chr17  61863431  61863455 BRIP1|NM_032043.3|non-overlapping|CTG 0 -  61863431  61863431 0,0,0  1 24, 0,
chr17  64496980  64497001 POLG2|NM_007215.4|non-overlapping|ATG 0 -  64496980  64496980 0,0,0  1 21, 0,
chr17  64496933  64497026 POLG2|NM_007215.4|overlapping|GTG 0 -  64496933  64496933 0,0,0  1 93, 0,
chr17  82273494  82273515 CSNK1D|NM_001893.6|non-overlapping|ATG 0 -  82273494  82273494 0,0,0  1 21, 0,
chr17  82273494  82273563 CSNK1D|NM_001893.6|non-overlapping|ATC 0 -  82273494  82273494 0,0,0  1 69, 0,
chr17  82244780  82273570 CSNK1D|NM_001893.6|CDS_extension|CTG 0 -  82244780  82244780 0,0,0  9 51,140,172,149,171,229,149,111,265, 0,4094,4650,6598,7653,8235,10648,20905,28525,
chr17  82273599  82273644 CSNK1D|NM_001893.6|non-overlapping|ATC 0 -  82273599  82273599 0,0,0  1 45, 0,
chr17  82273665  82273692 CSNK1D|NM_001893.6|non-overlapping|ATG 0 -  82273665  82273665 0,0,0  1 27, 0,
chr18  12371639  12377132 AFG3L2|NM_006796.3|overlapping|CTG 0 -  12371639  12371639 0,0,0  2 52,164, 0,5329,
chr18  31102237  31102249 DSC2|NM_024422.6|non-overlapping|ATG 0 -  31102237  31102237 0,0,0  1 12, 0,
chr19   3984180   3985408 EEF2|NM_001961.4|overlapping|CTG 0 -   3984180   3984180 0,0,0  2 170,31, 0,1197,
chr19   4400349   4400460 SH3GL1|NM_003025.4|overlapping|ACG 0 -   4400349   4400349 0,0,0  1 111, 0,
chr19   4400349   4400478 SH3GL1|NM_003025.4|overlapping|GTG 0 -   4400349   4400349 0,0,0  1 129, 0,
chr19   4818331   4818430 TICAM1|NM_182919.4|overlapping|ATG 0 -   4818331   4818331 0,0,0  1 99, 0,
chr19   4818331   4818478 TICAM1|NM_182919.4|overlapping|ATG 0 -   4818331   4818331 0,0,0  1 147, 0,
chr19   4818478   4818490 TICAM1|NM_182919.4|non-overlapping|CTG 0 -   4818478   4818478 0,0,0  1 12, 0,
chr19   4818515   4831642 TICAM1|NM_182919.4|non-overlapping|GTG 0 -   4818515   4818515 0,0,0  2 1,29, 0,13098,
chr19   4818478   4831695 TICAM1|NM_182919.4|non-overlapping|ACG 0 -   4818478   4818478 0,0,0  2 38,82, 0,13135,
chr19   7293919   7293952 INSR|NM_000208.4|non-overlapping|ATG 0 -   7293919   7293919 0,0,0  1 33, 0,
chr19   7293919   7294087 INSR|NM_000208.4|non-overlapping|CTG 0 -   7293919   7293919 0,0,0  1 168, 0,
chr19   7293948   7294239 INSR|NM_000208.4|non-overlapping|ATC 0 -   7293948   7293948 0,0,0  1 291, 0,
chr19   7293948   7294257 INSR|NM_000208.4|non-overlapping|CTG 0 -   7293948   7293948 0,0,0  1 309, 0,
chr19   7267803   7294301 INSR|NM_000208.4|overlapping|GTG 0 -   7267803   7267803 0,0,0  2 93,510, 0,25988,
chr19   7294087   7294360 INSR|NM_000208.4|non-overlapping|TTG 0 -   7294087   7294087 0,0,0  1 273, 0,
chr19  11384121  11384277 EPOR|NM_000121.4|overlapping|CTG 0 -  11384121  11384121 0,0,0  1 156, 0,
chr19  15192495  15200984 NOTCH3|NM_000435.3|overlapping|TTG 0 -  15192495  15192495 0,0,0  3 24,79,197, 0,5004,8292,
chr19  33302421  33302439 CEBPA|NM_004364.5|non-overlapping|ATG 0 -  33302421  33302421 0,0,0  1 18, 0,
chr19  39830481  39831956 DYRK1B|NM_004714.3|overlapping|GTG 0 -  39830481  39830481 0,0,0  3 82,120,152, 0,182,1323,
chr19  39834068  39834116 DYRK1B|NM_004714.3|non-overlapping|CTG 0 -  39834068  39834068 0,0,0  1 48, 0,
chr19  40285183  40285231 AKT2|NM_001626.6|non-overlapping|ATG 0 -  40285183  40285183 0,0,0  1 48, 0,
chr19  40285183  40285273 AKT2|NM_001626.6|non-overlapping|CTG 0 -  40285183  40285183 0,0,0  1 90, 0,
chr19  40265287  40285326 AKT2|NM_001626.6|non-overlapping|CTG 0 -  40265287  40265287 0,0,0  2 64,146, 0,19893,
chr19  41353174  41353321 TGFB1|NM_000660.7|non-overlapping|ACG 0 -  41353174  41353174 0,0,0  1 147, 0,
chr19  41988548  41994137 ATP1A3|NM_152296.5|overlapping|CTG 0 -  41988548  41988548 0,0,0  2 14,67, 0,5522,
chr19  41988376  41994201 ATP1A3|NM_152296.5|overlapping|ACG 0 -  41988376  41988376 0,0,0  3 1,87,131, 0,99,5694,
chr19  42248464  42255065 ERF|NM_006494.4|CDS_extension|ACG 0 -  42248464  42248464 0,0,0  4 1274,116,235,88, 0,1362,1866,6513,
chr19  42254995  42255070 ERF|NM_006494.4|overlapping|ACG 0 -  42254995  42254995 0,0,0  1 75, 0,
chr19  42250405  42255081 ERF|NM_006494.4|overlapping|ACG 0 -  42250405  42250405 0,0,0  2 160,104, 0,4572,
chr19  43780881  43780956 KCNN4|NM_002250.3|non-overlapping|CTG 0 -  43780881  43780881 0,0,0  1 75, 0,
chr19  49665728  49665797 IRF3|NM_001571.6|non-overlapping|ATG 0 -  49665728  49665728 0,0,0  1 69, 0,
chr19  49813142  49813163 FUZ|NM_025129.5|non-overlapping|ATG 0 -  49813142  49813142 0,0,0  1 21, 0,
chr19  49813128  49813206 FUZ|NM_025129.5|non-overlapping|CTG 0 -  49813128  49813128 0,0,0  1 78, 0,
chr20  10672872  10673645 JAG1|NM_000214.3|overlapping|ATA 0 -  10672872  10672872 0,0,0  2 134,196, 0,577,
chr20  10673487  10673664 JAG1|NM_000214.3|overlapping|ATG 0 -  10673487  10673487 0,0,0  1 177, 0,
chr20  10673487  10673706 JAG1|NM_000214.3|overlapping|TTG 0 -  10673487  10673487 0,0,0  1 219, 0,
chr20  10673638  10673758 JAG1|NM_000214.3|non-overlapping|ATC 0 -  10673638  10673638 0,0,0  1 120, 0,
chr20  10673865  10673880 JAG1|NM_000214.3|non-overlapping|ATG 0 -  10673865  10673865 0,0,0  1 15, 0,
chr20  10673865  10673919 JAG1|NM_000214.3|non-overlapping|CTG 0 -  10673865  10673865 0,0,0  1 54, 0,
chr20  14337441  14337459 FLRT3|NM_198391.3|non-overlapping|ATG 0 -  14337441  14337441 0,0,0  1 18, 0,
chr20  14337567  14337597 FLRT3|NM_198391.3|non-overlapping|ATG 0 -  14337567  14337567 0,0,0  1 30, 0,
chr20  23637914  23637920 CST3|NM_000099.4|non-overlapping|ATC 0 -  23637914  23637914 0,0,0  1 6, 0,
chr20  23637798  23637939 CST3|NM_000099.4|overlapping|ATC 0 -  23637798  23637798 0,0,0  1 141, 0,
chr20  35655233  35664842 RBM12|NM_001198838.2|overlapping|CTG 0 -  35655233  35655233 0,0,0  3 111,85,41, 0,3696,9568,
chr20  44186810  44186906 JPH2|NM_020433.5|non-overlapping|ATG 0 -  44186810  44186810 0,0,0  1 96, 0,
chr20  44186892  44187021 JPH2|NM_020433.5|non-overlapping|TTG 0 -  44186892  44186892 0,0,0  1 129, 0,
chr20  44186974  44187082 JPH2|NM_020433.5|non-overlapping|CTG 0 -  44186974  44186974 0,0,0  1 108, 0,
chr20  50928745  50928811 ADNP|NM_015339.5|non-overlapping|ATG 0 -  50928745  50928745 0,0,0  1 66, 0,
chr20  50931270  50931378 ADNP|NM_015339.5|non-overlapping|TTG 0 -  50931270  50931270 0,0,0  1 108, 0,
chr20  50931270  50931420 ADNP|NM_015339.5|non-overlapping|TTG 0 -  50931270  50931270 0,0,0  1 150, 0,
chr20  56390623  56390647 AURKA|NM_198433.3|non-overlapping|AGG 0 -  56390623  56390623 0,0,0  1 24, 0,
chr20  56388724  56392195 AURKA|NM_198433.3|non-overlapping|TTG 0 -  56388724  56388724 0,0,0  3 60,110,253, 0,1831,3218,
chr20  63472500  63472566 KCNQ2|NM_172107.4|non-overlapping|ATG 0 -  63472500  63472500 0,0,0  1 66, 0,
chr20  63472402  63472588 KCNQ2|NM_172107.4|overlapping|GTG 0 -  63472402  63472402 0,0,0  1 186, 0,
chr20  63472500  63472629 KCNQ2|NM_172107.4|non-overlapping|GTG 0 -  63472500  63472500 0,0,0  1 129, 0,
chr21  14968462  14968492 NRIP1|NM_003489.4|non-overlapping|ATG 0 -  14968462  14968462 0,0,0  1 30, 0,
chr21  14968488  14968506 NRIP1|NM_003489.4|non-overlapping|ATG 0 -  14968488  14968488 0,0,0  1 18, 0,
chr21  14968518  15014422 NRIP1|NM_003489.4|non-overlapping|ATG 0 -  14968518  14968518 0,0,0  2 8,79, 0,45825,
chr21  15014450  15043544 NRIP1|NM_003489.4|non-overlapping|CTG 0 -  15014450  15014450 0,0,0  2 16,50, 0,29044,
chr21  25881669  26170698 APP|NM_000484.4|CDS_extension|GTG 0 -  25881669  25881669 0,0,0 18 102,147,101,54,222,100,129,159,75,134,57,168,203,194,113,130,168,135, 0,10052,15903,23354,30071,72920,73957,93400,94284,100674,115690,118345,140170,169330,171566,208273,230309,288894,
chr21  35048844  35049194 RUNX1|NM_001754.5|overlapping|ATG 0 -  35048844  35048844 0,0,0  2 114,27, 0,323,
chr21  35048954  35049208 RUNX1|NM_001754.5|non-overlapping|ACG 0 -  35048954  35048954 0,0,0  2 4,41, 0,213,
chr21  35049223  35049238 RUNX1|NM_001754.5|non-overlapping|CTG 0 -  35049223  35049223 0,0,0  1 15, 0,
chr21  35049234  35049255 RUNX1|NM_001754.5|non-overlapping|CTG 0 -  35049234  35049234 0,0,0  1 21, 0,
chr22  20268088  20268172 RTN4R|NM_023004.6|overlapping|ATG 0 -  20268088  20268088 0,0,0  1 84, 0,
chr22  20268185  20268284 RTN4R|NM_023004.6|non-overlapping|CTG 0 -  20268185  20268185 0,0,0  1 99, 0,
chr22  23766183  23767917 CHCHD10|NM_001301339.2|overlapping|CTG 0 -  23766183  23766183 0,0,0  3 113,220,84, 0,1190,1650,
chr22  23767468  23767939 CHCHD10|NM_001301339.2|overlapping|ATT 0 -  23767468  23767468 0,0,0  2 125,106, 0,365,
chr22  30968241  30968256 MORC2|NM_001303256.3|non-overlapping|ATG 0 -  30968241  30968241 0,0,0  1 15, 0,
chr22  30968324  30968357 MORC2|NM_001303256.3|non-overlapping|ATG 0 -  30968324  30968324 0,0,0  1 33, 0,
chr22  36349040  36387921 MYH9|NM_002473.6|overlapping|CTG 0 -  36349040  36349040 0,0,0  2 215,115, 0,38766,
chr22  50523610  50525524 SCO2|NM_005138.3|CDS_extension|AGG 0 -  50523610  50523610 0,0,0  2 814,53, 0,1861,
chr22  50524169  50525528 SCO2|NM_005138.3|overlapping|CTG 0 -  50524169  50524169 0,0,0  2 255,57, 0,1302,
chrX  21754255  21757981 SMPX|NM_014332.3|overlapping|CTG 0 -  21754255  21754255 0,0,0  2 47,40, 0,3686,
chrX  21757965  21757989 SMPX|NM_014332.3|non-overlapping|CTG 0 -  21757965  21757965 0,0,0  1 24, 0,
chrX  21757958  21758051 SMPX|NM_014332.3|non-overlapping|ATC 0 -  21757958  21757958 0,0,0  1 93, 0,
chrX  21757958  21758057 SMPX|NM_014332.3|non-overlapping|ATT 0 -  21757958  21757958 0,0,0  1 99, 0,
chrX  21757958  21758063 SMPX|NM_014332.3|non-overlapping|ATC 0 -  21757958  21757958 0,0,0  1 105, 0,
chrX  21757958  21758072 SMPX|NM_014332.3|non-overlapping|ATG 0 -  21757958  21757958 0,0,0  1 114, 0,
chrX  40077883  40077949 BCOR|NM_017745.6|overlapping|CTG 0 -  40077883  40077883 0,0,0  1 66, 0,
chrX  41853155  41923013 CASK|NM_003688.3|overlapping|CTG 0 -  41853155  41853155 0,0,0  2 72,84, 0,69774,
chrX  64193347  64193356 AMER1|NM_152424.4|non-overlapping|ATG 0 -  64193347  64193347 0,0,0  1 9, 0,
chrX  64193358  64193373 AMER1|NM_152424.4|non-overlapping|ATG 0 -  64193358  64193358 0,0,0  1 15, 0,
chrX  72572087  72572796 HDAC8|NM_001166419.2|overlapping|CTG 0 -  72572087  72572087 0,0,0  2 22,146, 0,563,
chrX  72572768  72572822 HDAC8|NM_001166419.2|non-overlapping|CTG 0 -  72572768  72572768 0,0,0  1 54, 0,
chrX  75523214  75523238 ZDHHC15|NM_144969.3|non-overlapping|ATG 0 -  75523214  75523214 0,0,0  1 24, 0,
chrX  77786143  77786179 ATRX|NM_000489.6|non-overlapping|TTG 0 -  77786143  77786143 0,0,0  1 36, 0,
chrX  77786133  77786202 ATRX|NM_000489.6|non-overlapping|ATG 0 -  77786133  77786133 0,0,0  1 69, 0,
chrX 109683347 109696178 ACSL4|NM_004458.3|overlapping|ATT 0 - 109683347 109683347 0,0,0  2 25,35, 0,12796,
chrX 109683347 109733213 ACSL4|NM_004458.3|overlapping|ACG 0 - 109683347 109683347 0,0,0  3 25,53,75, 0,12796,49791,
chrX 119871614 119871638 RNF113A|NM_006978.3|non-overlapping|CTG 0 - 119871614 119871614 0,0,0  1 24, 0,
chrX 119871429 119871642 RNF113A|NM_006978.3|overlapping|ACG 0 - 119871429 119871429 0,0,0  1 213, 0,
chrX 119871673 119871682 RNF113A|NM_006978.3|non-overlapping|GTG 0 - 119871673 119871673 0,0,0  1 9, 0,
chrX 153596175 153599129 CCNQ|NM_152274.5|overlapping|CTG 0 - 153596175 153596175 0,0,0  2 12,168, 0,2786,
chrX 153934900 153934936 NAA10|NM_003491.4|overlapping|ATC 0 - 153934900 153934900 0,0,0  1 36, 0,
chrX 153934900 153934939 NAA10|NM_003491.4|overlapping|ACG 0 - 153934900 153934900 0,0,0  1 39, 0,
chrX 154371302 154374536 FLNA|NM_001110556.2|non-overlapping|ATC 0 - 154371302 154371302 0,0,0  2 59,31, 0,3203,
chr17  76487761  76487770 RHBDF2|NM_024599.5|non-overlapping|ATG 0 -  76487761  76487761 0,0,0  1 9, 0,
chr17  76481510  76487820 RHBDF2|NM_024599.5|overlapping|CTG 0 -  76481510  76481510 0,0,0  2 35,109, 0,6201,
chr17  76487816  76487882 RHBDF2|NM_024599.5|non-overlapping|GTG 0 -  76487816  76487816 0,0,0  1 66, 0,
chr4 101346994 101347021 PPP3CA|NM_000944.5|non-overlapping|CTG 0 - 101346994 101346994 0,0,0  1 27, 0,
chr9 132928912 132928936 TSC1|NM_000368.5|non-overlapping|ATG 0 - 132928912 132928912 0,0,0  1 24, 0,
chr9 136544077 136545970 NOTCH1|NM_017617.5|overlapping|ACG 0 - 136544077 136544077 0,0,0  2 25,245, 0,1648,
chr1  23019509  23083364 KDM1A|NM_001009999.3|CDS_extension|GTG 0 +  23019509  23019509 0,0,0 21 438,166,60,134,79,93,107,82,95,12,143,91,135,74,112,133,188,115,128,147,186, 0,10959,24917,30877,34251,35559,36422,37974,39563,46550,49029,49551,51715,52614,53782,57718,59480,60043,61936,62710,63669,
chr1  23019542  23083364 KDM1A|NM_001009999.3|CDS_extension|ACG 0 +  23019542  23019542 0,0,0 21 405,166,60,134,79,93,107,82,95,12,143,91,135,74,112,133,188,115,128,147,186, 0,10926,24884,30844,34218,35526,36389,37941,39530,46517,48996,49518,51682,52581,53749,57685,59447,60010,61903,62677,63636,
chr1 156114909 156137764 LMNA|NM_005572.4|CDS_extension|CTG 0 + 156114909 156114909 0,0,0 10 365,157,126,171,126,221,223,108,120,111, 0,15707,19493,19895,20277,20991,21304,22011,22203,22744,
chr1 156114909 156139106 LMNA|NM_170707.4|CDS_extension|CTG 0 + 156114909 156114909 0,0,0 12 365,157,126,171,126,221,223,108,120,90,270,27, 0,15707,19493,19895,20277,20991,21304,22011,22203,22744,23578,24170,
chr1 160415705 160425378 VANGL2|NM_020335.3|CDS_extension|AGG 0 + 160415705 160415705 0,0,0  7 203,121,608,137,136,232,261, 0,356,3296,4705,5346,8346,9412,
chr1 207752125 207790304 CD46|NM_002389.4|CDS_extension|CTG 0 + 207752125 207752125 0,0,0 13 184,189,103,86,198,183,45,45,42,39,36,64,52, 0,4888,5414,7513,9123,14887,15481,15653,18195,31166,32945,33493,38127,
chr1 207752170 207790304 CD46|NM_002389.4|CDS_extension|CTG 0 + 207752170 207752170 0,0,0 13 139,189,103,86,198,183,45,45,42,39,36,64,52, 0,4843,5369,7468,9078,14842,15436,15608,18150,31121,32900,33448,38082,
chr2  15942088  15946097 MYCN|NM_005378.6|CDS_truncation|ATG 0 +  15942088  15942088 0,0,0  2 766,605, 0,3404,
chr2  28752097  28799303 PPP1CB|NM_206876.2|CDS_extension|CTG 0 +  28752097  28752097 0,0,0  8 79,132,231,105,72,152,135,105, 0,24753,26711,29640,31809,36560,41765,47101,
chr2 108719507 108783901 RANBP2|NM_006267.5|CDS_extension|CTG 0 + 108719507 108719507 0,0,0 29 171,68,112,153,231,146,193,88,210,182,176,124,162,138,147,180,84,136,95,5152,171,93,179,205,102,161,274,335,306, 0,9624,11266,11814,16024,16596,20981,27203,29412,31756,32020,32363,33490,33918,34317,35397,35668,38905,42593,43729,52193,52981,53360,56224,57622,61761,62620,63020,64088,
chr3   9731795   9734162 BRPF1|NM_001003694.2|overlapping|ACG 0 +   9731795   9731795 0,0,0  2 343,32, 0,2335,
chr3 181712216 181713314 SOX2|NM_003106.4|CDS_extension|CTG 0 + 181712216 181712216 0,0,0  1 1098, 0,
chr3 181712168 181713314 SOX2|NM_003106.4|CDS_extension|CTG 0 + 181712168 181712168 0,0,0  1 1146, 0,
chr3 181712102 181713314 SOX2|NM_003106.4|CDS_extension|ATA 0 + 181712102 181712102 0,0,0  1 1212, 0,
chr3 181712117 181713314 SOX2|NM_003106.4|CDS_extension|ATC 0 + 181712117 181712117 0,0,0  1 1197, 0,
chr3 186570765 186585408 DNAJB11|NM_016306.6|CDS_extension|CTG 0 + 186570765 186570765 0,0,0 10 200,157,98,133,143,83,58,112,160,65, 0,1329,5074,6902,10605,11229,11950,13099,13664,14578,
chr4   4859917   4863143 MSX1|NM_002448.3|CDS_truncation|ATG 0 +   4859917   4859917 0,0,0  2 451,443, 0,2783,
chr5  52989378  53090599 ITGA2|NM_002203.4|CDS_extension|GTG 0 +  52989378  52989378 0,0,0 30 154,121,110,92,115,128,149,151,166,77,139,146,144,204,137,140,152,111,83,142,93,77,84,103,111,105,114,90,117,81, 0,37369,52733,55622,58984,59264,62032,66159,66605,68646,70495,71522,73407,75533,76462,77739,80730,82559,83234,83739,85006,85682,85842,89393,91132,92213,93961,97573,100567,101140,
chr5  62306346  62385569 KIF2A|NM_001098511.3|CDS_extension|CTG 0 +  62306346  62306346 0,0,0 21 190,95,120,55,123,101,96,55,163,91,64,92,143,205,111,68,114,151,102,136,86, 0,40783,41701,43719,46241,46928,48812,51344,51790,54895,55119,56103,56831,57348,58896,60067,66091,67340,71314,74771,79137,
chr6   7541681   7541774 DSP|NM_004415.4|non-overlapping|TTG 0 +   7541681   7541681 0,0,0  1 93, 0,
chr7   6374534   6402446 RAC1|NM_018890.4|CDS_extension|CTG 0 +   6374534   6374534 0,0,0  7 236,72,118,57,63,160,131, 0,12677,17389,24127,25591,27333,27781,
chr7  76302688  76304173 HSPB1|NM_001540.5|CDS_extension|ACG 0 +  76302688  76302688 0,0,0  3 388,64,190, 0,1113,1295,
chr7  91941030  92110159 AKAP9|NM_005751.5|CDS_extension|ATC 0 +  91941030  91941030 0,0,0 50 117,258,45,54,171,156,198,2388,214,80,139,86,115,196,97,93,354,225,141,104,206,233,163,213,233,120,177,105,153,180,1074,141,486,64,122,192,189,145,220,151,669,209,106,183,201,233,86,130,140,38, 0,32680,39258,51127,51854,53590,54572,59817,71398,73218,75098,75986,81207,81783,88864,90481,97388,99643,101015,101637,103977,111695,120229,121243,124200,125396,128999,129874,135824,136665,138048,141491,142139,143609,143788,144464,145197,148354,152066,153992,155658,156555,157078,158656,159825,161563,164647,166262,167463,169091,
chr9 127612367 127690857 STXBP1|NM_001032221.6|CDS_extension|ACG 0 + 127612367 127612367 0,0,0 19 73,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,83, 0,39235,41347,46007,47662,48734,50837,52879,53798,55712,57530,59683,60813,63436,64276,66063,67789,70038,78407,
chr9 127612367 127684477 STXBP1|NM_003165.6|CDS_extension|ACG 0 + 127612367 127612367 0,0,0 19 73,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,110, 0,39235,41347,46007,47662,48734,50837,52879,53798,55712,57530,59683,60813,63436,64276,66063,67789,70038,72000,
chr10 102504047 102630155 SUFU|NM_016169.4|CDS_extension|ATC 0 + 102504047 102504047 0,0,0 12 287,135,137,143,86,73,154,112,135,139,69,90, 0,5121,45922,88534,89588,89945,93092,95385,111220,113242,123127,126018,
chr10 102504083 102630155 SUFU|NM_016169.4|CDS_extension|CTG 0 + 102504083 102504083 0,0,0 12 251,135,137,143,86,73,154,112,135,139,69,90, 0,5085,45886,88498,89552,89909,93056,95349,111184,113206,123091,125982,
chr10 112950426 113165972 TCF7L2|NM_030756.5|CDS_extension|CTG 0 + 112950426 112950426 0,0,0 14 519,67,125,102,133,103,87,126,160,108,49,51,73,418, 0,780,1056,89598,190757,193496,195584,200571,201298,201906,207594,208240,209493,215128,
chr13  48233216  48261224 ITM2B|NM_021999.5|CDS_extension|CTG 0 +  48233216  48233216 0,0,0  6 261,129,207,111,151,86, 0,20591,22960,24909,25580,27922,
chr13  99981938  99985682 ZIC2|NM_007129.5|CDS_extension|GTG 0 +  99981938  99981938 0,0,0  3 1201,164,360, 0,3007,3384,
chr13  99981255  99981285 ZIC2|NM_007129.5|non-overlapping|ATG 0 +  99981255  99981255 0,0,0  1 30 0
chr14 101964667 102050563 DYNC1H1|NM_001376.5|CDS_extension|CTG 0 + 101964667 101964667 0,0,0 78 280,88,174,256,187,272,228,1077,180,150,147,141,177,111,120,240,156,114,111,210,147,167,174,166,189,195,283,101,160,244,184,213,239,157,228,231,141,234,207,122,166,164,130,134,115,162,215,205,174,120,121,196,118,216,213,128,154,147,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,154,143,169,128,129, 0,11044,14651,15051,15696,18351,18714,21019,22785,24035,26859,29516,30005,30318,30513,32367,35321,35618,36286,36477,36867,37869,38124,39850,40094,40374,41220,42340,43510,45175,45608,46072,47207,47646,50437,51188,51681,52098,52420,52715,53783,55225,58083,61906,62506,62715,62951,63269,64871,65151,65494,67604,68397,68601,69308,69657,71821,73792,74030,74333,74744,74970,75568,75930,76906,77345,77560,77716,77967,79207,79606,79927,83149,83848,84772,85046,85403,85767,
chr15  23565752  23567306 MKRN3|NM_005664.4|CDS_extension|CTG 0 +  23565752  23565752 0,0,0  1 1554, 0,
chr15  40161184  40220759 BUB1B|NM_001211.6|CDS_extension|CTG 0 +  40161184  40161184 0,0,0 23 71,144,60,145,197,170,215,92,230,113,116,50,61,106,275,134,141,101,150,143,172,107,196, 0,3868,8877,9352,15292,22529,23980,24366,35360,38430,39059,39746,41220,41404,44999,47452,48450,48925,51314,52147,56311,57271,59379,
chr15  40161112  40220759 BUB1B|NM_001211.6|CDS_extension|TTG 0 +  40161112  40161112 0,0,0 23 143,144,60,145,197,170,215,92,230,113,116,50,61,106,275,134,141,101,150,143,172,107,196, 0,3940,8949,9424,15364,22601,24052,24438,35432,38502,39131,39818,41292,41476,45071,47524,48522,48997,51386,52219,56383,57343,59451,
chr15  76995480  77037176 PSTPIP1|NM_003978.5|CDS_extension|CTG 0 +  76995480  76995480 0,0,0 15 129,101,75,35,107,63,99,46,80,99,97,91,56,134,132, 0,22667,22976,29803,30017,32371,33073,34048,35021,35699,36817,37381,40027,40321,41564,
chr15  76995531  77037176 PSTPIP1|NM_003978.5|CDS_extension|CTG 0 +  76995531  76995531 0,0,0 15 78,101,75,35,107,63,99,46,80,99,97,91,56,134,132, 0,22616,22925,29752,29966,32320,33022,33997,34970,35648,36766,37330,39976,40270,41513,
chr17  44557547  44559386 FZD2|NM_001466.4|CDS_extension|CTG 0 +  44557547  44557547 0,0,0  1 1839, 0,
chr17  61399900  61408506 TBX2|NM_005994.4|CDS_extension|ATC 0 +  61399900  61399900 0,0,0  7 671,268,147,77,164,635,453, 0,1783,3160,4520,4705,5301,8153,
chr17  61400026  61408506 TBX2|NM_005994.4|CDS_extension|GTG 0 +  61400026  61400026 0,0,0  7 545,268,147,77,164,635,453, 0,1657,3034,4394,4579,5175,8027,
chr17  68512497  68530449 PRKAR1A|NM_002734.5|CDS_extension|ACG 0 +  68512497  68512497 0,0,0 11 51,183,171,92,62,47,159,61,122,82,173, 0,2896,10258,11227,11518,12414,13256,15342,16372,17422,17779,
chr18   3450360   3457940 TGIF1|NM_173208.3|CDS_extension|ACG 0 +   3450360   3450360 0,0,0  3 145,227,576, 0,5993,7004,
chr18  35041476  35140369 MAPRE2|NM_014268.4|CDS_extension|ACG 0 +  35041476  35041476 0,0,0  7 185,128,146,214,140,159,75, 0,28718,55969,60469,85471,90555,98818,
chr19  10984130  11061816 SMARCA4|NM_001128849.3|CDS_extension|CTG 0 +  10984130  10984130 0,0,0 35 243,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,99,78,219,96,254,109,102,133,143,33, 0,1142,2058,2774,3535,5186,7019,10697,12082,12363,18898,19209,23771,26250,28818,34826,35460,37594,39387,40200,41291,42169,43653,46599,49159,49636,49992,50783,55327,57176,74124,74657,75622,75914,77653,
chr19  35745861  35746847 PSENEN|NM_172341.4|CDS_extension|CTG 0 +  35745861  35745861 0,0,0  3 130,105,140, 0,557,846,
chr19  35745888  35746847 PSENEN|NM_172341.4|CDS_extension|TTG 0 +  35745888  35745888 0,0,0  3 103,105,140, 0,530,819,
chr20  36154826  36229340 EPB41L1|NM_012156.2|CDS_extension|CTG 0 +  36154826  36154826 0,0,0 22 70,191,165,105,43,76,219,88,153,98,176,149,36,183,411,105,84,87,84,81,117,9, 0,18937,20724,23125,23803,27445,30290,32849,33520,35450,35795,39385,40502,43032,54661,57445,59530,64049,64934,67037,67451,74505,
chr20  50510479  50582715 PTPN1|NM_002827.4|CDS_extension|ACG 0 +  50510479  50510479 0,0,0 10 111,91,101,99,138,210,162,224,196,24, 0,50883,54489,57900,64037,67940,68688,69223,70785,72212,
chr22  32801962  32859377 TIMP3|NM_000362.5|CDS_extension|AGG 0 +  32801962  32801962 0,0,0  5 160,83,112,122,198, 0,47489,55286,56054,57217,
chrX 115610259 115649561 PLS3|NM_005032.7|CDS_truncation|ATG 0 + 115610259 115610259 0,0,0 15 64,164,130,133,82,166,143,96,196,79,115,134,124,125,133, 0,11986,18938,19575,23740,24621,26576,30148,33053,34761,35812,36142,37290,37633,39169,
chrX 154552038 154564461 IKBKG|NM_001099857.5|CDS_truncation|ATG 0 + 154552038 154552038 0,0,0  9 151,212,119,153,97,144,143,62,143, 0,4126,6493,8368,9649,10771,11520,11920,12280,
chr6 109691381 109825265 FIG4|NM_014845.6|CDS_extension|CTG 0 + 109691381 109691381 0,0,0 23 120,99,124,157,51,149,129,101,163,98,134,117,46,149,167,139,59,148,84,196,83,87,178, 0,23696,25063,35727,41255,43768,46943,50062,51728,52293,68868,70709,72555,73631,75347,85540,93588,94920,98212,99994,101200,105383,133706,
chr1 151404801 151459198 POGZ|NM_015100.4|CDS_extension|ACG 0 - 151404801 151404801 0,0,0 19 1663,25,113,57,141,173,135,147,101,155,338,107,219,291,109,176,159,125,47, 0,1805,2109,2433,3298,3607,3892,6823,7494,18595,19147,20153,23021,23321,24801,25864,36126,37279,54350,
chr2  25234278  25314050 DNMT3A|NM_175629.2|CDS_extension|ATT 0 -  25234278  25234278 0,0,0 22 142,119,70,86,149,91,146,85,184,113,80,45,150,157,108,159,216,147,44,271,105,138, 0,1428,2657,4851,6023,6361,7283,9619,9876,10261,10974,11741,11881,12341,12772,13312,13758,40662,41221,48162,65860,79634,
chr2 189561877 189580499 SLC40A1|NM_014585.6|CDS_extension|ATA 0 - 189561877 189561877 0,0,0  8 314,642,246,127,116,160,68,82, 0,1706,3476,9837,10968,13283,17935,18540,
chr2 214728675 214809668 BARD1|NM_000465.4|CDS_extension|TTG 0 - 214728675 214728675 0,0,0 11 333,98,93,133,109,173,81,950,149,57,257, 0,1735,16391,17046,23771,38806,40556,51884,63621,68385,80736,
chr3  49887306  49903756 MST1R|NM_002447.4|CDS_extension|CTG 0 -  49887306  49887306 0,0,0 20 256,137,166,110,182,81,207,102,166,147,210,94,162,137,166,161,171,129,189,1377, 0,2617,3178,3890,4092,4451,7860,8140,8408,8654,8888,9233,9422,9973,10213,10744,11211,11560,11768,15073,
chr4   1212239   1249081 CTBP1|NM_001328.3|CDS_extension|ACG 0 -   1212239   1212239 0,0,0  9 184,118,128,131,215,207,145,155,166, 0,673,1238,2103,3751,13120,15959,25943,36676,
chr5 122066742 122078000 LOX|NM_002317.7|CDS_extension|CTG 0 - 122066742 122066742 0,0,0  7 7,116,96,157,138,109,646, 0,3310,3751,7270,8661,10150,10612,
chr5 122077984 122077993 LOX|NM_002317.7|non-overlapping|AAG 0 - 122077984 122077984 0,0,0  1 9, 0,
chr5 141516850 141618926 DIAPH1|NM_005219.5|CDS_extension|GTG 0 - 141516850 141516850 0,0,0 28 158,87,136,165,125,130,240,102,95,99,9,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,27,129, 0,7292,9187,9446,10722,11602,11851,12321,12752,17484,54577,55075,56641,58116,59379,59905,60624,61374,61664,62237,63893,65461,66355,66634,67273,70191,71373,101947,
chr5 161294080 161546694 GABRB2|NM_021911.3|CDS_extension|TTG 0 - 161294080 161294080 0,0,0 10 348,114,245,153,138,83,221,68,92,128, 0,32287,36802,40671,42551,116894,165543,251146,252241,252486,
chr8 143725920 143733717 FAM83H|NM_198488.5|CDS_extension|GTG 0 - 143725920 143725920 0,0,0  5 2803,125,165,462,27, 0,3046,3238,4215,7770,
chr9  92715153  92764786 BICD2|NM_001003800.2|CDS_extension|CTG 0 -  92715153  92715153 0,0,0  7 310,152,1044,456,153,213,282, 0,2643,3385,5146,7502,13870,49351,
chr9 115021156 115091075 TNC|NM_002160.4|CDS_extension|GTG 0 - 115021156 115021156 0,0,0 27 111,164,162,97,152,133,131,144,120,144,123,273,273,273,273,273,273,273,264,90,186,270,157,116,264,1410,514, 0,2816,5377,8203,9097,10396,14047,14941,17104,19784,21062,25253,27103,35996,38573,41760,42639,43490,52446,54875,55233,56786,60615,61535,63052,64707,69405,
chr10  68415038  68471879 DNA2|NM_001080449.3|CDS_extension|ATC 0 -  68415038  68415038 0,0,0 21 69,147,180,90,205,90,194,225,110,110,117,231,195,163,118,220,132,146,184,183,89, 0,1670,3995,4764,7186,7476,7658,15397,16823,17167,17355,21972,27878,29882,31257,34989,44065,50628,53084,54942,56752,
chr11    644549    695011 DEAF1|NM_021008.4|CDS_truncation|CTG 0 -    644549    644549 0,0,0 12 105,90,248,129,129,127,66,140,147,130,98,253, 0,9412,29986,34144,35138,36413,40348,42308,43361,43781,46951,50209,
chr11   2135434   2138421 IGF2|NM_000612.6|overlapping|CTG 0 -   2135434   2135434 0,0,0  2 95,193, 0,2794,
chr11   2884003   2885681 CDKN1C|NM_000076.2|CDS_extension|ACG 0 -   2884003   2884003 0,0,0  2 131,1012, 0,666,
chr11  65539079  65558190 LTBP3|NM_001130144.3|CDS_extension|CTG 0 -  65539079  65539079 0,0,0 28 152,132,81,162,141,138,129,84,168,129,120,123,123,123,129,132,126,99,73,17,186,159,123,93,106,203,330,562, 0,248,468,640,933,1165,1406,1791,2046,2520,4025,4347,7362,7718,8359,8610,8840,12046,12322,12468,12892,13168,13780,14084,14345,14621,14971,18549,
chr11  66685870  66721375 SPTBN2|NM_006946.4|CDS_extension|CTG 0 -  66685870  66685870 0,0,0 37 234,43,174,221,51,76,143,197,85,139,245,375,205,131,261,90,225,264,147,91,203,757,138,871,154,303,159,118,188,113,116,81,92,174,152,179,26, 0,527,1123,1556,1997,2133,2298,2782,3225,3934,4168,5413,6665,7099,7315,7901,8268,10406,12768,13121,13535,14655,15713,18727,19813,21645,22270,23031,24711,25046,27760,28220,28445,29351,29959,35213,35479,
chr12   6570675   6606406 CHD4|NM_001273.5|CDS_extension|CTG 0 -   6570675   6570675 0,0,0 39 18,164,196,133,109,138,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,216,122,133, 0,193,2398,7109,7353,7733,8170,10368,10615,10973,11461,11939,12172,12351,12522,16708,17036,17622,20790,21018,21240,21717,22020,22415,22740,23783,24658,25330,27218,27546,29097,29541,29858,30250,30613,30972,31284,31700,35598,
chr12   9067822   9115843 A2M|NM_000014.6|CDS_truncation|AAG 0 -   9067822   9067822 0,0,0 36 17,42,103,69,91,128,219,224,181,75,157,88,177,84,52,122,127,229,115,112,162,150,143,64,228,162,110,115,121,85,169,21,53,160,184,80, 0,360,917,1922,2665,4536,4830,6737,8933,9523,9878,11421,11816,12271,21377,22079,22533,23378,25642,27150,27716,30784,31558,33321,33624,36416,38413,38668,39701,41498,42044,42491,44336,44554,45537,47941,
chr13 109756303 109786275 IRS2|NM_003749.3|CDS_extension|ATC 0 - 109756303 109756303 0,0,0  2 5,4234, 0,25738,
chr15  23686251  23687256 NDN|NM_002487.3|CDS_extension|CTG 0 -  23686251  23686251 0,0,0  1 1005, 0,
chr15  89330207  89333809 POLG|NM_002693.3|overlapping|CTG 0 -  89330207  89330207 0,0,0  2 69,714, 0,2888,
chr16  70252720  70289444 AARS|NM_001605.3|CDS_extension|CTG 0 -  70252720  70252720 0,0,0 21 186,114,87,120,114,109,185,207,114,179,145,125,151,109,146,145,192,146,189,165,24, 0,547,993,1198,1900,3007,5312,6259,8323,9625,12237,12817,14938,15550,16897,17475,19060,23765,24245,29899,36700,
chr16  79594459  79599998 MAF|NM_005360.5|CDS_extension|CTG 0 -  79594459  79594459 0,0,0  2 94,1214, 0,4325,
chr16  88715604  88785126 PIEZO1|NM_001142864.4|CDS_extension|ACG 0 -  88715604  88715604 0,0,0 51 250,187,80,123,173,93,189,148,159,215,148,133,265,189,259,180,107,173,57,103,101,72,104,90,172,97,244,154,105,205,201,126,177,158,149,183,149,179,112,261,101,88,87,172,214,169,139,43,123,96,226, 0,328,593,756,954,1201,1418,3969,4197,4464,4780,5011,5561,5933,6203,6613,6978,7232,7490,7621,8266,9404,9811,9990,10679,10942,11110,11434,11952,16101,16730,17002,17673,17983,18301,18751,19045,19270,19530,20543,21034,21954,22123,22329,22622,22963,25873,26448,26695,33779,69296,
chr17   7669608   7687450 TP53|NM_000546.6|CDS_extension|CTG 0 -   7669608   7669608 0,0,0 11 82,107,74,137,110,113,184,279,22,102,74, 0,1000,3926,4092,4572,5250,5444,6385,6773,6912,17768,
chr17   7669608   7687393 TP53|NM_000546.6|CDS_extension|ACG 0 -   7669608   7669608 0,0,0 11 82,107,74,137,110,113,184,279,22,102,17, 0,1000,3926,4092,4572,5250,5444,6385,6773,6912,17768,
chr17  46031475  46172134 KANSL1|NM_001193466.2|CDS_truncation|ATG 0 -  46031475  46031475 0,0,0 14 228,253,113,58,125,149,189,183,172,196,119,102,142,1280, 0,571,1604,1927,2685,7062,7551,8226,19057,35061,36073,50965,63084,139379,
chr19  14736235  14776828 ADGRE2|NM_013447.4|CDS_extension|CTG 0 -  14736235  14736235 0,0,0 20 9,111,169,92,67,236,198,174,224,108,178,78,47,147,147,132,156,117,51,103, 0,7184,7380,9996,10660,15200,16093,18718,19418,20002,28197,29084,29288,29422,29999,30742,36106,37702,38020,40490,
chr19  41331051  41353740 TGFB1|NM_000660.7|CDS_extension|CTG 0 -  41331051  41331051 0,0,0  7 159,154,148,78,118,161,1051, 0,1076,10831,11118,13695,17243,21638,
chr19  41331051  41353086 TGFB1|NM_000660.7|CDS_extension|CTG 0 -  41331051  41331051 0,0,0  7 159,154,148,78,118,161,397, 0,1076,10831,11118,13695,17243,21638,
chr19  41331051  41353572 TGFB1|NM_000660.7|CDS_extension|CTG 0 -  41331051  41331051 0,0,0  7 159,154,148,78,118,161,883, 0,1076,10831,11118,13695,17243,21638,
chr20   2461755   2470714 SNRPB|NM_198216.2|CDS_extension|ATC 0 -   2461755   2461755 0,0,0  7 38,126,139,153,112,152,27, 0,880,1333,1991,3952,5851,8932,
chr21  26112135  26170675 APP|NM_000484.4|overlapping|ACG 0 -  26112135  26112135 0,0,0  2 11,112, 0,58428,
chrX 120439153 120469220 LAMP2|NM_013995.2|CDS_extension|CTG 0 - 120439153 120439153 0,0,0  9 140,165,64,123,185,159,214,119,115, 0,2576,3445,7151,8687,9816,16203,17497,29952,
chrX 120431322 120469220 LAMP2|NM_002294.3|CDS_extension|CTG 0 - 120431322 120431322 0,0,0  9 140,165,64,123,185,159,214,119,115, 0,10407,11276,14982,16518,17647,24034,25328,37783,
chrX 153929986 153934931 NAA10|NM_003491.4|CDS_extension|CTG 0 - 153929986 153929986 0,0,0  8 237,85,45,116,46,59,99,48, 0,776,2084,2329,2552,3956,4390,4897,
chr17  76471632  76487813 RHBDF2|NM_024599.5|CDS_extension|TTG 0 -  76471632  76471632 0,0,0 18 420,154,101,76,95,64,110,162,75,112,195,119,129,204,196,209,171,102, 0,1053,1372,1619,2015,2206,2400,2740,3097,3397,5197,5547,6024,7173,7449,8100,9742,16079,
chr4  89726627  89835655 SNCA|NM_000345.4|CDS_truncation|ATG 0 -  89726627  89726627 0,0,0  5 33,84,143,42,109, 0,2566,95618,101515,108919,
chr1  21554044  21554128 ALPL|NM_000478.6|overlapping|CTG 0 +  21554044  21554044 0,0,0  1 84, 0,
chr1  21509458  21554002 ALPL|NM_000478.6|non-overlapping|CTG 0 +  21509458  21509458 0,0,0  2 59,25, 0,44519,
chr10  80205437  80205512 ANXA11|NM_001157.3|non-overlapping|CTG 0 -  80205437  80205437 0,0,0  1 75, 0,
chr10  80155852  80205412 ANXA11|NM_001157.3|CDS_extension|ACG 0 -  80155852  80155852 0,0,0 15 60,123,59,96,94,57,80,91,114,95,88,390,116,63,70, 0,1788,2114,3247,6082,7496,7681,8200,10231,11037,11373,13116,14947,16954,49490,
chr3  57227836  57235581 APPL1|NM_012096.3|overlapping|CTG 0 +  57227836  57227836 0,0,0  2 101,16, 0,7729,
chr11 108227602 108227641 ATM|NM_000051.4|overlapping|GTG 0 + 108227602 108227602 0,0,0  1 39, 0,
chr1 160115816 160141322 ATP1A2|NM_000702.4|CDS_extension|CTG 0 + 160115816 160115816 0,0,0 23 57,105,60,204,114,135,118,269,199,110,135,190,176,137,151,169,155,124,146,131,102,92,29, 0,5089,5375,7396,8126,8479,9319,11735,12835,13163,13449,14285,14605,18667,19328,19617,20022,20430,20753,21084,23823,24076,25477,
chr6  16522627  16585814 ATXN1|NM_000332.3|non-overlapping|ATG 0 -  16522627  16522627 0,0,0  2 61,35, 0,63152,
chr1  22078434  22078539 CDC42|NM_001791.4|overlapping|ATC 0 +  22078434  22078434 0,0,0  1 105, 0,
chr1 193122061 193122217 CDC73|NM_024529.5|overlapping|ACG 0 + 193122061 193122061 0,0,0  1 156, 0,
chr15  92900354  92900363 CHD2|NM_001271.4|non-overlapping|GTG 0 +  92900354  92900354 0,0,0  1 9, 0,
chr13  59666583  60163820 DIAPH3|NM_001042517.2|CDS_extension|TTG 0 -  59666583  59666583 0,0,0 28 263,60,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,70,75,131,105,177,33,234, 0,107605,108144,144204,166523,172740,194823,212645,245151,249571,258191,303360,304268,307768,314211,317185,324574,325484,325889,341960,343949,349329,349487,376106,427044,445426,466373,497003,
chr6   7541662   7541890 DSP|NM_004415.4|non-overlapping|ACG 0 +   7541662   7541662 0,0,0  1 228, 0,
chr2  55867072  55923770 EFEMP1|NM_001039348.3|CDS_extension|CTG 0 -  55867072  55867072 0,0,0 12 162,196,124,120,120,120,123,387,49,88,41,60, 0,3647,3927,7873,9550,10673,14539,50592,51146,55287,55826,56638,
chr2 212538526 212538580 ERBB4|NM_005235.3|overlapping|ATG 0 - 212538526 212538526 0,0,0  1 54, 0,
chr19  51345210  51354302 ETFB|NM_001985.3|CDS_truncation|GTG 0 -  51345210  51345210 0,0,0  5 171,159,63,159,153, 0,1689,5118,7921,8939,
chr1  63322873  63322894 FOXD3|NM_012183.3|non-overlapping|ATG 0 +  63322873  63322873 0,0,0  1 21, 0,
chr11  61967536  61967629 FTH1|NM_002032.3|non-overlapping|ACG 0 -  61967536  61967536 0,0,0  1 93, 0,
chr6  32666636  32666645 HLA_DQB1|NM_002123.5|non-overlapping|CTG 0 -  32666636  32666636 0,0,0  1 9, 0,
chr12  54280720  54284313 HNRNPA1|NM_031157.4|CDS_extension|CTG 0 +  54280720  54280720 0,0,0 10 102,117,147,211,93,93,75,156,156,56, 0,665,1074,1369,1673,1852,2079,2358,3091,3537,
chr2 226799328 226799523 IRS1|NM_005544.3|non-overlapping|ATG 0 - 226799328 226799328 0,0,0  1 195, 0,
chr2 226799328 226799784 IRS1|NM_005544.3|non-overlapping|ACG 0 - 226799328 226799328 0,0,0  1 456, 0,
chr2 226799328 226799466 IRS1|NM_005544.3|non-overlapping|ATG 0 - 226799328 226799328 0,0,0  1 138, 0,
chr2 226799328 226799721 IRS1|NM_005544.3|non-overlapping|ACG 0 - 226799328 226799328 0,0,0  1 393, 0,
chr2 226799328 226799760 IRS1|NM_005544.3|non-overlapping|ACG 0 - 226799328 226799328 0,0,0  1 432, 0,
chr2 226799203 226799644 IRS1|NM_005544.3|non-overlapping|CTG 0 - 226799203 226799203 0,0,0  1 441, 0,
chr1  10210716  10210740 KIF1B|NM_015074.3|non-overlapping|ATG 0 +  10210716  10210716 0,0,0  1 24, 0,
chr3 188225488 188874479 LPP|NM_005578.5|CDS_extension|CTG 0 + 188225488 188225488 0,0,0 10 39,202,113,123,684,127,170,179,121,129, 0,180623,259103,299176,383672,482778,534624,640711,647154,648862,
chr5 173235099 173235162 NKX2_5|NM_001166176.2|non-overlapping|ATG 0 - 173235099 173235099 0,0,0  1 63, 0,
chr5 177133901 177135164 NSD1|NM_022455.5|overlapping|ATG 0 + 177133901 177133901 0,0,0  2 51,78, 0,1185,
chr14  56801734  56805537 OTX2|NM_172337.3|CDS_extension|CTG 0 -  56801734  56801734 0,0,0  3 621,152,178, 0,2453,3625,
chr17   2638103   2638121 PAFAH1B1|NM_000430.4|non-overlapping|ATG 0 +   2638103   2638103 0,0,0  1 18, 0,
chr2 238288788 238288794 PER2|NM_022817.3|non-overlapping|ATG 0 - 238288788 238288788 0,0,0  1 6, 0,
chr2 238288358 238288664 PER2|NM_022817.3|non-overlapping|CTG 0 - 238288358 238288358 0,0,0  1 306, 0,
chr2 238288358 238288754 PER2|NM_022817.3|non-overlapping|CTG 0 - 238288358 238288358 0,0,0  1 396, 0,
chr19  18155663  18155714 PIK3R2|NM_005027.4|non-overlapping|ATG 0 +  18155663  18155663 0,0,0  1 51, 0,
chr1 154936850 154936859 PMVK|NM_006556.4|non-overlapping|ATG 0 - 154936850 154936850 0,0,0  1 9, 0,
chr2  28752085  28799303 PPP1CB|NM_206876.2|CDS_extension|TTG 0 +  28752085  28752085 0,0,0  8 91,132,231,105,72,152,135,105, 0,24765,26723,29652,31821,36572,41777,47113,
chr19  52190060  52190075 PPP2R1A|NM_014225.6|non-overlapping|CTG 0 +  52190060  52190060 0,0,0  1 15, 0,
chr1  46248370  46248382 RAD54L|NM_003579.4|non-overlapping|ATG 0 +  46248370  46248370 0,0,0  1 12, 0,
chr20  35655233  35658950 RBM12|NM_001198838.2|overlapping|ATT 0 -  35655233  35655233 0,0,0  2 111,21, 0,3696,
chr6  34425214  34426078 RPS10|NM_001014.5|overlapping|ATG 0 -  34425214  34425214 0,0,0  2 7,47, 0,817,
chr9 128552664 128566810 SPTAN1|NM_001130438.3|overlapping|ACG 0 + 128552664 128552664 0,0,0  2 32,73, 0,14073,
chr16  30699935  30739733 SRCAP|NM_006662.3|CDS_extension|GTG 0 +  30699935  30699935 0,0,0 33 46,263,252,186,141,223,278,94,90,174,323,178,137,170,193,137,187,170,266,288,165,186,267,1499,266,203,170,197,115,120,195,84,2685, 0,680,4128,7247,7636,9577,9915,10818,11063,11635,11899,12326,12743,13272,13583,16130,16357,20226,20777,21253,22186,22627,23027,23648,29030,29434,33344,33666,33958,34560,36264,36605,37113,
chr2  96253807  96265495 TMEM127|NM_017849.4|CDS_extension|CTG 0 -  96253807  96253807 0,0,0  3 308,165,358, 0,1025,11330,
chr1 201373241 201377658 TNNT2|NM_000364.4|overlapping|ACG 0 - 201373241 201373241 0,0,0  2 27,36, 0,4381,
chr1 201373246 201377645 TNNT2|NM_000364.4|overlapping|CTG 0 - 201373246 201373246 0,0,0  2 22,23, 0,4376,
chr1 201373246 201377672 TNNT2|NM_000364.4|overlapping|CTG 0 - 201373246 201373246 0,0,0  2 22,50, 0,4376,
chr20  46689526  46689544 TP53RK|NM_033550.4|non-overlapping|GTG 0 -  46689526  46689526 0,0,0  1 18, 0,
chr20  46689526  46689553 TP53RK|NM_033550.4|non-overlapping|GTG 0 -  46689526  46689526 0,0,0  1 27, 0,
chr20  46689526  46689583 TP53RK|NM_033550.4|non-overlapping|TTG 0 -  46689526  46689526 0,0,0  1 57, 0,
chr20  46689442  46689469 TP53RK|NM_033550.4|non-overlapping|ATC 0 -  46689442  46689442 0,0,0  1 27, 0,
chr20  46689442  46689490 TP53RK|NM_033550.4|non-overlapping|ATT 0 -  46689442  46689442 0,0,0  1 48, 0,
chr19  49157832  49158244 TRPM4|NM_017636.4|overlapping|CTG 0 +  49157832  49157832 0,0,0  2 58,53, 0,359,
chr15  50648801  50686717 TRPM7|NM_017672.6|overlapping|ATG 0 -  50648801  50648801 0,0,0  4 84,39,80,187, 0,8979,14165,37729,
chr17   1724828   1725074 WDR81|NM_001163809.2|overlapping|CTG 0 +   1724828   1724828 0,0,0  1 246, 0,
chr17   1724882   1725074 WDR81|NM_001163809.2|overlapping|CTG 0 +   1724882   1724882 0,0,0  1 192, 0,
chr14 103711536 103712930 XRCC3|NM_005432.4|non-overlapping|ATG 0 - 103711536 103711536 0,0,0  2 31,56, 0,1338,
chr14 103711242 103711519 XRCC3|NM_005432.4|non-overlapping|ATG 0 - 103711242 103711242 0,0,0  2 3,54, 0,223,
chr1   1013523   1013996 ISG15|NM_005101.4|overlapping|TTG 0 +   1013523   1013523 0,0,0  2 53,13, 0,460,
chr1   1512168   1512249 ATAD3A|NM_001170535.3|non-overlapping|GTG 0 +   1512168   1512168 0,0,0  1 81, 0,
chr1   3772774   3772792 SMIM1|NM_001163724.3|non-overlapping|ACG 0 +   3772774   3772774 0,0,0  1 18, 0,
chr1   3773095   3775443 SMIM1|NM_001163724.3|overlapping|CTG 0 +   3773095   3773095 0,0,0  2 86,145, 0,2203,
chr1   3773120   3773135 SMIM1|NM_001163724.3|non-overlapping|CTG 0 +   3773120   3773120 0,0,0  1 15, 0,
chr1   3775310   3775921 SMIM1|NM_001163724.3|CDS_extension|CTG 0 +   3775310   3775310 0,0,0  2 173,127, 0,484,
chr1   7961703   7961739 PARK7|NM_007262.5|non-overlapping|CTG 0 +   7961703   7961703 0,0,0  1 36, 0,
chr1   7961725   7962778 PARK7|NM_007262.5|non-overlapping|CTG 0 +   7961725   7961725 0,0,0  2 68,16, 0,1037,
chr1   9234838   9245050 H6PD|NM_004285.4|overlapping|CTG 0 +   9234838   9234838 0,0,0  2 228,126, 0,10086,
chr1   9972029   9972050 NMNAT1|NM_022787.4|non-overlapping|GTG 0 +   9972029   9972029 0,0,0  1 21, 0,
chr1  11934734  11974808 PLOD1|NM_000302.4|CDS_extension|CTG 0 +  11934734  11934734 0,0,0 19 121,92,134,164,113,64,98,102,132,122,105,126,142,114,66,105,147,126,156, 0,13241,15038,15622,17888,20095,22182,23107,23781,25911,28797,29440,29909,30745,31516,32252,35935,38137,39918,
chr1  12234204  12234228 VPS13D|NM_015378.4|non-overlapping|ATG 0 +  12234204  12234204 0,0,0  1 24, 0,
chr1  32274129  32285716 LCK|NM_001042771.3|CDS_extension|CTG 0 +  32274129  32274129 0,0,0 13 97,110,82,91,99,104,150,153,180,77,154,132,203, 0,195,607,863,1191,1439,1784,2207,2477,5541,5711,5949,11384,
chr1  32274197  32274364 LCK|NM_001042771.3|overlapping|ATG 0 +  32274197  32274197 0,0,0  2 29,40, 0,127,
chr1  39955192  39955366 MFSD2A|NM_001136493.3|overlapping|GTG 0 +  39955192  39955192 0,0,0  1 174, 0,
chr1  40258243  40260852 ZMPSTE24|NM_005857.5|overlapping|CTG 0 +  40258243  40258243 0,0,0  2 151,14, 0,2595,
chr1  40979736  40979817 CTPS1|NM_001905.4|non-overlapping|ATG 0 +  40979736  40979736 0,0,0  1 81, 0,
chr1  43530985  43531087 PTPRF|NM_002840.5|non-overlapping|GTG 0 +  43530985  43530985 0,0,0  1 102, 0,
chr1  43531062  43538253 PTPRF|NM_002840.5|non-overlapping|ATG 0 +  43531062  43531062 0,0,0  2 28,56, 0,7135,
chr1  43707549  43736241 ST3GAL3|NM_006279.5|non-overlapping|ATG 0 +  43707549  43707549 0,0,0  2 144,9, 0,28683,
chr1  45340196  45341111 TOE1|NM_025077.4|overlapping|ACG 0 +  45340196  45340196 0,0,0  2 108,39, 0,876,
chr1  52927340  52927460 SCP2|NM_002979.5|overlapping|CTG 0 +  52927340  52927340 0,0,0  1 120, 0,
chr1  63370787  63370802 ALG6|NM_013339.4|non-overlapping|ATA 0 +  63370787  63370787 0,0,0  1 15, 0,
chr1  63370882  63370912 ALG6|NM_013339.4|non-overlapping|ATT 0 +  63370882  63370882 0,0,0  1 30, 0,
chr1  63593417  63593495 PGM1|NM_002633.3|overlapping|CTG 0 +  63593417  63593417 0,0,0  1 78, 0,
chr1  63774045  63774177 ROR1|NM_005012.4|non-overlapping|CTG 0 +  63774045  63774045 0,0,0  1 132, 0,
chr1  63774362  64009329 ROR1|NM_005012.4|overlapping|ATG 0 +  63774362  63774362 0,0,0  2 146,25, 0,234942,
chr1  70411322  70439127 CTH|NM_001902.6|CDS_extension|CTG 0 +  70411322  70411322 0,0,0 12 261,82,96,110,132,58,78,153,122,53,139,27, 0,4633,6614,10243,12962,18471,18994,20760,22505,23802,27365,27778,
chr1  75724732  75724747 ACADM|NM_000016.6|non-overlapping|ATG 0 +  75724732  75724732 0,0,0  1 15, 0,
chr1  94418404  94418422 ABCD3|NM_002858.4|non-overlapping|CTG 0 +  94418404  94418404 0,0,0  1 18, 0,
chr1  99850989  99851034 AGL|NM_000642.3|non-overlapping|CTG 0 +  99850989  99850989 0,0,0  1 45, 0,
chr1  99970094  99993570 SLC35A3|NM_012243.3|overlapping|CTG 0 +  99970094  99970094 0,0,0  2 68,34, 0,23442,
chr1 100352530 100352560 CDC14A|NM_033312.3|non-overlapping|CTG 0 + 100352530 100352530 0,0,0  1 30, 0,
chr1 100352545 100352560 CDC14A|NM_033312.3|non-overlapping|CTG 0 + 100352545 100352545 0,0,0  1 15, 0,
chr1 100352596 100352953 CDC14A|NM_033312.3|non-overlapping|ATG 0 + 100352596 100352596 0,0,0  1 357, 0,
chr1 103525746 103525779 RNPC3|NM_017619.4|non-overlapping|GTG 0 + 103525746 103525746 0,0,0  1 33, 0,
chr1 103525783 103525792 RNPC3|NM_017619.4|non-overlapping|TTG 0 + 103525783 103525783 0,0,0  1 9, 0,
chr1 103526010 103526025 RNPC3|NM_017619.4|non-overlapping|ATG 0 + 103526010 103526010 0,0,0  1 15, 0,
chr1 108877073 108885374 GPSM2|NM_013296.5|non-overlapping|CTG 0 + 108877073 108877073 0,0,0  2 155,100, 0,8201,
chr1 108885397 108885406 GPSM2|NM_013296.5|non-overlapping|ATG 0 + 108885397 108885397 0,0,0  1 9, 0,
chr1 108885435 108885486 GPSM2|NM_013296.5|non-overlapping|ATG 0 + 108885435 108885435 0,0,0  1 51, 0,
chr1 108885514 108885538 GPSM2|NM_013296.5|overlapping|ATG 0 + 108885514 108885514 0,0,0  1 24, 0,
chr1 109213936 109213969 SARS|NM_006513.4|non-overlapping|CTG 0 + 109213936 109213936 0,0,0  1 33, 0,
chr1 109619934 109619952 AMPD2|NM_001368809.2|non-overlapping|ATG 0 + 109619934 109619934 0,0,0  1 18, 0,
chr1 109619959 109620112 AMPD2|NM_001368809.2|non-overlapping|CTG 0 + 109619959 109619959 0,0,0  1 153, 0,
chr1 110150562 110150880 SLC6A17|NM_001010898.4|non-overlapping|CTG 0 + 110150562 110150562 0,0,0  1 318, 0,
chr1 110150606 110150705 SLC6A17|NM_001010898.4|non-overlapping|ATC 0 + 110150606 110150606 0,0,0  1 99, 0,
chr1 110150780 110166850 SLC6A17|NM_001010898.4|non-overlapping|CTG 0 + 110150780 110150780 0,0,0  2 103,8, 0,16062,
chr1 110166850 110166865 SLC6A17|NM_001010898.4|non-overlapping|ATG 0 + 110166850 110166850 0,0,0  1 15, 0,
chr1 112509118 112509133 WNT2B|NM_024494.3|non-overlapping|CTG 0 + 112509118 112509118 0,0,0  1 15, 0,
chr1 113073269 113073425 LRIG2|NM_014813.3|overlapping|ATG 0 + 113073269 113073269 0,0,0  1 156, 0,
chr1 113073279 113073339 LRIG2|NM_014813.3|non-overlapping|ATG 0 + 113073279 113073279 0,0,0  1 60, 0,
chr1 119711970 119711979 PHGDH|NM_006623.4|non-overlapping|TTG 0 + 119711970 119711970 0,0,0  1 9, 0,
chr1 119712001 119744040 PHGDH|NM_006623.4|CDS_extension|ATT 0 + 119712001 119712001 0,0,0 12 159,152,66,55,99,133,149,153,133,131,238,155, 0,9168,11374,14849,15002,22632,23293,25112,28384,29765,30805,31884,
chr1 150487426 150487432 TARS2|NM_025150.5|non-overlapping|ATG 0 + 150487426 150487426 0,0,0  1 6, 0,
chr1 150508136 150508184 ECM1|NM_004425.4|non-overlapping|GTG 0 + 150508136 150508136 0,0,0  1 48, 0,
chr1 150552224 150552236 ADAMTSL4|NM_019032.6|non-overlapping|ATG 0 + 150552224 150552224 0,0,0  1 12, 0,
chr1 151008491 151008533 PRUNE1|NM_021222.3|non-overlapping|GTG 0 + 151008491 151008491 0,0,0  1 42, 0,
chr1 151008522 151008540 PRUNE1|NM_021222.3|non-overlapping|CTG 0 + 151008522 151008522 0,0,0  1 18, 0,
chr1 151008552 151017899 PRUNE1|NM_021222.3|overlapping|CTG 0 + 151008552 151008552 0,0,0  2 119,88, 0,9259,
chr1 151008610 151017846 PRUNE1|NM_021222.3|overlapping|ACG 0 + 151008610 151008610 0,0,0  2 61,35, 0,9201,
chr1 154272679 154272727 HAX1|NM_006118.4|overlapping|ATG 0 + 154272679 154272679 0,0,0  1 48, 0,
chr1 154983875 154983896 FLAD1|NM_001184891.1|non-overlapping|ATG 0 + 154983875 154983875 0,0,0  1 21, 0,
chr1 156054854 156054878 LAMTOR2|NM_014017.4|non-overlapping|CTG 0 + 156054854 156054854 0,0,0  1 24, 0,
chr1 173824849 173824966 DARS2|NM_018122.5|non-overlapping|GTG 0 + 173824849 173824849 0,0,0  1 117, 0,
chr1 173824982 173824991 DARS2|NM_018122.5|non-overlapping|ATG 0 + 173824982 173824982 0,0,0  1 9, 0,
chr1 173825082 173825142 DARS2|NM_018122.5|non-overlapping|ATG 0 + 173825082 173825082 0,0,0  1 60, 0,
chr1 179882315 179882393 TOR1AIP1|NM_001267578.2|non-overlapping|ATG 0 + 179882315 179882315 0,0,0  1 78, 0,
chr1 183186278 183215509 LAMC2|NM_005562.3|overlapping|GTG 0 + 183186278 183186278 0,0,0  3 153,189,57, 0,21602,29174,
chr1 183186314 183215509 LAMC2|NM_005562.3|overlapping|CTG 0 + 183186314 183186314 0,0,0  3 117,189,57, 0,21566,29138,
chr1 183186332 183215509 LAMC2|NM_005562.3|overlapping|CTG 0 + 183186332 183186332 0,0,0  3 99,189,57, 0,21548,29120,
chr1 198639060 198639093 PTPRC|NM_002838.5|non-overlapping|ATG 0 + 198639060 198639060 0,0,0  1 33, 0,
chr1 207321703 207321754 CD55|NM_000574.5|non-overlapping|CTG 0 + 207321703 207321703 0,0,0  1 51, 0,
chr1 207321713 207322385 CD55|NM_000574.5|overlapping|CTG 0 + 207321713 207321713 0,0,0  2 152,4, 0,668,
chr1 212858304 212858472 FLVCR1|NM_014053.4|overlapping|ATT 0 + 212858304 212858304 0,0,0  1 168, 0,
chr1 212858341 212895290 FLVCR1|NM_014053.4|CDS_extension|GTG 0 + 212858341 212858341 0,0,0 10 849,145,141,68,104,111,106,112,68,75, 0,5383,14336,25029,26951,29549,30147,30804,36644,36874,
chr1 212858360 212858600 FLVCR1|NM_014053.4|overlapping|GTG 0 + 212858360 212858360 0,0,0  1 240, 0,
chr1 214603279 214613758 CENPF|NM_016343.4|overlapping|CTG 0 + 214603279 214603279 0,0,0  2 42,45, 0,10434,
chr1 214613724 214613736 CENPF|NM_016343.4|non-overlapping|ATG 0 + 214613724 214613724 0,0,0  1 12, 0,
chr1 220094172 220094436 IARS2|NM_018060.4|overlapping|CTG 0 + 220094172 220094172 0,0,0  1 264, 0,
chr1 226940310 226961440 COQ8A|NM_020247.5|overlapping|GTG 0 + 226940310 226940310 0,0,0  2 89,64, 0,21066,
chr1 226940328 226961440 COQ8A|NM_020247.5|overlapping|GTG 0 + 226940328 226940328 0,0,0  2 71,64, 0,21048,
chr1 226940368 226961423 COQ8A|NM_020247.5|overlapping|GTG 0 + 226940368 226940368 0,0,0  2 31,47, 0,21008,
chr1 230642516 230642588 COG2|NM_007357.3|non-overlapping|CTG 0 + 230642516 230642516 0,0,0  1 72, 0,
chr1 230642545 230642620 COG2|NM_007357.3|overlapping|CTG 0 + 230642545 230642545 0,0,0  1 75, 0,
chr1 230642557 230642620 COG2|NM_007357.3|overlapping|CTG 0 + 230642557 230642557 0,0,0  1 63, 0,
chr1 230642571 230642625 COG2|NM_007357.3|overlapping|TTG 0 + 230642571 230642571 0,0,0  1 54, 0,
chr1 230642578 230642620 COG2|NM_007357.3|overlapping|TTG 0 + 230642578 230642578 0,0,0  1 42, 0,
chr1 231241225 231241339 GNPAT|NM_014236.4|non-overlapping|ATG 0 + 231241225 231241225 0,0,0  1 114, 0,
chr1 231241330 231241339 GNPAT|NM_014236.4|non-overlapping|ACG 0 + 231241330 231241330 0,0,0  1 9, 0,
chr1 231338029 231338044 SPRTN|NM_032018.7|non-overlapping|ATG 0 + 231338029 231338029 0,0,0  1 15, 0,
chr1 231338079 231338097 SPRTN|NM_032018.7|non-overlapping|CTG 0 + 231338079 231338079 0,0,0  1 18, 0,
chr1 231338154 231338208 SPRTN|NM_032018.7|non-overlapping|ATG 0 + 231338154 231338154 0,0,0  1 54, 0,
chr1 231338296 231338311 SPRTN|NM_032018.7|non-overlapping|CTG 0 + 231338296 231338296 0,0,0  1 15, 0,
chr1 231338333 231338372 SPRTN|NM_032018.7|non-overlapping|CTG 0 + 231338333 231338333 0,0,0  1 39, 0,
chr1 235367460 235448762 TBCE|NM_003193.5|CDS_extension|CTG 0 + 235367460 235367460 0,0,0 17 44,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,93, 0,12558,34042,46972,52012,59679,63244,66743,68284,68925,69083,69861,71308,74353,75391,80888,81209,
chr1 235367485 235380050 TBCE|NM_003193.5|non-overlapping|CTG 0 + 235367485 235367485 0,0,0  2 19,32, 0,12533,
chr1 235380035 235380050 TBCE|NM_003193.5|non-overlapping|CTG 0 + 235380035 235380035 0,0,0  1 15, 0,
chr1 236795320 236803436 MTR|NM_000254.3|overlapping|ATG 0 + 236795320 236795320 0,0,0  2 417,9, 0,8107,
chr1 236795343 236795436 MTR|NM_000254.3|non-overlapping|ATG 0 + 236795343 236795343 0,0,0  1 93, 0,
chr1 236795475 236795520 MTR|NM_000254.3|non-overlapping|ACG 0 + 236795475 236795475 0,0,0  1 45, 0,
chr1 236795657 236803455 MTR|NM_000254.3|overlapping|ACG 0 + 236795657 236795657 0,0,0  2 80,28, 0,7770,
chr1 243256101 243256164 SDCCAG8|NM_006642.5|non-overlapping|CTG 0 + 243256101 243256101 0,0,0  1 63, 0,
chr1 243256131 243256164 SDCCAG8|NM_006642.5|non-overlapping|ATT 0 + 243256131 243256131 0,0,0  1 33, 0,
chr1 243256154 243270195 SDCCAG8|NM_006642.5|overlapping|CTG 0 + 243256154 243256154 0,0,0  2 86,91, 0,13950,
chr2   3379791   3379851 TRAPPC12|NM_016030.6|non-overlapping|ATT 0 +   3379791   3379791 0,0,0  1 60, 0,
chr2   3379816   3379843 TRAPPC12|NM_016030.6|non-overlapping|ACG 0 +   3379816   3379816 0,0,0  1 27, 0,
chr2  26244940  26254280 HADHB|NM_000183.3|overlapping|TTG 0 +  26244940  26244940 0,0,0  2 50,34, 0,9306,
chr2  26244946  26254280 HADHB|NM_000183.3|overlapping|CTG 0 +  26244946  26244946 0,0,0  2 44,34, 0,9300,
chr2  27051743  27051758 AGBL5|NM_021831.6|non-overlapping|GTG 0 +  27051743  27051743 0,0,0  1 15, 0,
chr2  27052939  27053002 AGBL5|NM_021831.6|overlapping|ATG 0 +  27052939  27052939 0,0,0  1 63, 0,
chr2  27086785  27086863 KHK|NM_000221.3|non-overlapping|ATG 0 +  27086785  27086785 0,0,0  1 78, 0,
chr2  27086888  27086897 KHK|NM_000221.3|non-overlapping|ATC 0 +  27086888  27086888 0,0,0  1 9, 0,
chr2  27086925  27086955 KHK|NM_000221.3|non-overlapping|GTG 0 +  27086925  27086925 0,0,0  1 30, 0,
chr2  27087033  27087198 KHK|NM_000221.3|non-overlapping|TTG 0 +  27087033  27087033 0,0,0  1 165, 0,
chr2  27217409  27217919 CAD|NM_004341.5|overlapping|CTG 0 +  27217409  27217409 0,0,0  2 224,43, 0,467,
chr2  27217451  27217919 CAD|NM_004341.5|overlapping|ACG 0 +  27217451  27217451 0,0,0  2 182,43, 0,425,
chr2  27217480  27217540 CAD|NM_004341.5|non-overlapping|ACG 0 +  27217480  27217480 0,0,0  1 60, 0,
chr2  43774088  43774112 DYNC2LI1|NM_016008.4|non-overlapping|CTG 0 +  43774088  43774088 0,0,0  1 24, 0,
chr2  46617223  46617262 CRIPT|NM_014171.6|non-overlapping|TTG 0 +  46617223  46617223 0,0,0  1 39, 0,
chr2  46941287  46941575 TTC7A|NM_020458.4|overlapping|TTG 0 +  46941287  46941287 0,0,0  1 288, 0,
chr2  46941303  46941525 TTC7A|NM_020458.4|non-overlapping|ACG 0 +  46941303  46941303 0,0,0  1 222, 0,
chr2  46941521  46941575 TTC7A|NM_020458.4|overlapping|ATG 0 +  46941521  46941521 0,0,0  1 54, 0,
chr2  47369411  47373475 EPCAM|NM_002354.3|overlapping|CTG 0 +  47369411  47369411 0,0,0  2 170,13, 0,4051,
chr2  64989427  64989622 SLC1A4|NM_003038.5|non-overlapping|CTG 0 +  64989427  64989427 0,0,0  1 195, 0,
chr2  64989467  64989845 SLC1A4|NM_003038.5|overlapping|CTG 0 +  64989467  64989467 0,0,0  1 378, 0,
chr2  64989500  64989845 SLC1A4|NM_003038.5|overlapping|CTG 0 +  64989500  64989500 0,0,0  1 345, 0,
chr2  64989554  64989845 SLC1A4|NM_003038.5|overlapping|CTG 0 +  64989554  64989554 0,0,0  1 291, 0,
chr2  69013278  69013344 ANTXR1|NM_032208.3|non-overlapping|ATT 0 +  69013278  69013278 0,0,0  1 66, 0,
chr2  69013288  69013396 ANTXR1|NM_032208.3|non-overlapping|TTG 0 +  69013288  69013288 0,0,0  1 108, 0,
chr2  71453648  71453687 DYSF|NM_003494.4|non-overlapping|ATG 0 +  71453648  71453648 0,0,0  1 39, 0,
chr2  71453730  71453766 DYSF|NM_003494.4|non-overlapping|ATG 0 +  71453730  71453730 0,0,0  1 36, 0,
chr2  74529954  74529975 HTRA2|NM_013247.5|non-overlapping|CTG 0 +  74529954  74529954 0,0,0  1 21, 0,
chr2  85354768  85354780 ELMOD3|NM_001135022.2|non-overlapping|ATG 0 +  85354768  85354768 0,0,0  1 12, 0,
chr2  85354776  85354827 ELMOD3|NM_001135022.2|non-overlapping|ATG 0 +  85354776  85354776 0,0,0  1 51, 0,
chr2  85354779  85354827 ELMOD3|NM_001135022.2|non-overlapping|AGG 0 +  85354779  85354779 0,0,0  1 48, 0,
chr2  85355130  85355142 ELMOD3|NM_001135022.2|non-overlapping|ATG 0 +  85355130  85355130 0,0,0  1 12, 0,
chr2  85355133  85355142 ELMOD3|NM_001135022.2|non-overlapping|ATG 0 +  85355133  85355133 0,0,0  1 9, 0,
chr2  85357031  85357094 ELMOD3|NM_001135022.2|non-overlapping|ATG 0 +  85357031  85357031 0,0,0  1 63, 0,
chr2  97713655  97724109 ZAP70|NM_001079.4|overlapping|CTG 0 +  97713655  97713655 0,0,0  3 19,79,94, 0,260,10360,
chr2  97713968  97724109 ZAP70|NM_001079.4|overlapping|CTG 0 +  97713968  97713968 0,0,0  2 26,94, 0,10047,
chr2 111898683 111898794 MERTK|NM_006343.3|overlapping|ACG 0 + 111898683 111898683 0,0,0  1 111, 0,
chr2 111898691 111929248 MERTK|NM_006343.3|overlapping|CTG 0 + 111898691 111898691 0,0,0  2 105,129, 0,30428,
chr2 111898697 111929248 MERTK|NM_006343.3|overlapping|ATC 0 + 111898697 111898697 0,0,0  2 99,129, 0,30422,
chr2 169509717 169509738 KLHL41|NM_006063.3|non-overlapping|CTG 0 + 169509717 169509717 0,0,0  1 21, 0,
chr2 170816894 170818569 GAD1|NM_000817.3|non-overlapping|CTG 0 + 170816894 170816894 0,0,0  2 154,41, 0,1634,
chr2 170816939 170818569 GAD1|NM_000817.3|non-overlapping|CTG 0 + 170816939 170816939 0,0,0  2 109,41, 0,1589,
chr2 170816945 170818569 GAD1|NM_000817.3|non-overlapping|GTG 0 + 170816945 170816945 0,0,0  2 103,41, 0,1583,
chr2 170816992 170818592 GAD1|NM_000817.3|non-overlapping|CTG 0 + 170816992 170816992 0,0,0  2 56,64, 0,1536,
chr2 171434315 171435093 DCAF17|NM_025000.4|overlapping|CTG 0 + 171434315 171434315 0,0,0  2 388,11, 0,767,
chr2 171434380 171434617 DCAF17|NM_025000.4|overlapping|CTG 0 + 171434380 171434380 0,0,0  1 237, 0,
chr2 171434477 171435093 DCAF17|NM_025000.4|overlapping|CTG 0 + 171434477 171434477 0,0,0  2 226,11, 0,605,
chr2 172427693 172427888 ITGA6|NM_001079818.3|overlapping|GTG 0 + 172427693 172427693 0,0,0  1 195, 0,
chr2 173075872 173075887 MAP3K20|NM_016653.3|non-overlapping|ATG 0 + 173075872 173075872 0,0,0  1 15, 0,
chr2 173091026 173091164 MAP3K20|NM_016653.3|overlapping|ATG 0 + 173091026 173091026 0,0,0  1 138, 0,
chr2 173354872 173354905 CDCA7|NM_031942.5|non-overlapping|CTG 0 + 173354872 173354872 0,0,0  1 33, 0,
chr2 173354913 173358730 CDCA7|NM_031942.5|overlapping|CTG 0 + 173354913 173354913 0,0,0  2 71,19, 0,3798,
chr2 173354944 173358794 CDCA7|NM_031942.5|overlapping|CTG 0 + 173354944 173354944 0,0,0  2 40,83, 0,3767,
chr2 201071801 201071858 NDUFB3|NM_002491.3|non-overlapping|ATA 0 + 201071801 201071801 0,0,0  1 57, 0,
chr2 201071860 201071908 NDUFB3|NM_002491.3|non-overlapping|ATG 0 + 201071860 201071860 0,0,0  1 48, 0,
chr2 201072009 201078893 NDUFB3|NM_002491.3|overlapping|TTG 0 + 201072009 201072009 0,0,0  2 50,13, 0,6871,
chr2 201233604 201234111 CASP8|NM_001228.4|non-overlapping|CTG 0 + 201233604 201233604 0,0,0  2 18,96, 0,411,
chr2 206765614 206765653 FASTKD2|NM_014929.4|non-overlapping|ATG 0 + 206765614 206765614 0,0,0  1 39, 0,
chr2 206766655 206766700 FASTKD2|NM_014929.4|overlapping|ACG 0 + 206766655 206766655 0,0,0  1 45, 0,
chr2 215312093 215312507 ATIC|NM_004044.7|overlapping|GTG 0 + 215312093 215312093 0,0,0  2 68,10, 0,404,
chr2 216412513 216413876 SMARCAL1|NM_014140.4|non-overlapping|CTG 0 + 216412513 216412513 0,0,0  2 135,21, 0,1342,
chr2 216412541 216412550 SMARCAL1|NM_014140.4|non-overlapping|GTG 0 + 216412541 216412541 0,0,0  1 9, 0,
chr2 216412620 216412638 SMARCAL1|NM_014140.4|non-overlapping|ATG 0 + 216412620 216412620 0,0,0  1 18, 0,
chr2 216413869 216414668 SMARCAL1|NM_014140.4|non-overlapping|ATG 0 + 216413869 216413869 0,0,0  2 23,22, 0,777,
chr2 219279388 219279817 DNAJB2|NM_001039550.2|non-overlapping|ATG 0 + 219279388 219279388 0,0,0  2 130,20, 0,409,
chr2 219498917 219498926 GMPPA|NM_205847.3|non-overlapping|CTG 0 + 219498917 219498917 0,0,0  1 9, 0,
chr2 227328735 227328756 MFF|NM_020194.5|non-overlapping|ATG 0 + 227328735 227328735 0,0,0  1 21, 0,
chr2 231206214 231206229 ARMC9|NM_025139.6|non-overlapping|ATT 0 + 231206214 231206214 0,0,0  1 15, 0,
chr2 232014855 232014876 DIS3L2|NM_152383.5|non-overlapping|AAG 0 + 232014855 232014855 0,0,0  1 21, 0,
chr2 237487293 237487347 MLPH|NM_024101.7|non-overlapping|CTG 0 + 237487293 237487293 0,0,0  1 54, 0,
chr2 237487343 237487352 MLPH|NM_024101.7|non-overlapping|CTG 0 + 237487343 237487343 0,0,0  1 9, 0,
chr2 237487356 237487365 MLPH|NM_024101.7|non-overlapping|CTG 0 + 237487356 237487356 0,0,0  1 9, 0,
chr2 237487412 237493461 MLPH|NM_024101.7|overlapping|CTG 0 + 237487412 237487412 0,0,0  2 25,59, 0,5990,
chr2 238320549 238320627 TRAF3IP1|NM_015650.4|non-overlapping|CTG 0 + 238320549 238320549 0,0,0  1 78, 0,
chr2 238320527 238320608 TRAF3IP1|NM_015650.4|non-overlapping|ATG 0 + 238320527 238320527 0,0,0  1 81, 0,
chr3   9890652   9892932 JAGN1|NM_032492.4|overlapping|GTG 0 +   9890652   9890652 0,0,0  2 159,18, 0,2262,
chr3   9890667   9892932 JAGN1|NM_032492.4|overlapping|GTG 0 +   9890667   9890667 0,0,0  2 144,18, 0,2247,
chr3   9890673   9892932 JAGN1|NM_032492.4|overlapping|TTG 0 +   9890673   9890673 0,0,0  2 138,18, 0,2241,
chr3   9917116   9917203 IL17RC|NM_153461.4|non-overlapping|CTG 0 +   9917116   9917116 0,0,0  1 87, 0,
chr3   9917155   9917203 IL17RC|NM_153461.4|non-overlapping|GTG 0 +   9917155   9917155 0,0,0  1 48, 0,
chr3   9917192   9917243 IL17RC|NM_153461.4|non-overlapping|CTG 0 +   9917192   9917192 0,0,0  1 51, 0,
chr3   9917234   9917243 IL17RC|NM_153461.4|non-overlapping|ACG 0 +   9917234   9917234 0,0,0  1 9, 0,
chr3  10026452  10028636 FANCD2|NM_033084.6|non-overlapping|ACG 0 +  10026452  10026452 0,0,0  2 21,12, 0,2172,
chr3  12484580  12484628 TSEN2|NM_025265.4|non-overlapping|ATC 0 +  12484580  12484580 0,0,0  1 48, 0,
chr3  12484636  12489797 TSEN2|NM_025265.4|non-overlapping|CTG 0 +  12484636  12484636 0,0,0  2 244,14, 0,5147,
chr3  39383400  39383505 SLC25A38|NM_017875.4|non-overlapping|ATA 0 +  39383400  39383400 0,0,0  1 105, 0,
chr3  39383427  39383505 SLC25A38|NM_017875.4|non-overlapping|CTG 0 +  39383427  39383427 0,0,0  1 78, 0,
chr3  39383621  39383642 SLC25A38|NM_017875.4|non-overlapping|CTG 0 +  39383621  39383621 0,0,0  1 21, 0,
chr3  45388589  45388631 LARS2|NM_015340.4|non-overlapping|ATG 0 +  45388589  45388589 0,0,0  1 42, 0,
chr3  45388608  45391600 LARS2|NM_015340.4|non-overlapping|GTG 0 +  45388608  45388608 0,0,0  2 72,18, 0,2974,
chr3  45388633  45388651 LARS2|NM_015340.4|non-overlapping|GTG 0 +  45388633  45388633 0,0,0  1 18, 0,
chr3  45391619  45394499 LARS2|NM_015340.4|overlapping|CTG 0 +  45391619  45391619 0,0,0  2 29,67, 0,2813,
chr3  46979699  46979738 NBEAL2|NM_015175.3|non-overlapping|CTG 0 +  46979699  46979699 0,0,0  1 39, 0,
chr3  46979776  46988886 NBEAL2|NM_015175.3|overlapping|ATG 0 +  46979776  46979776 0,0,0  3 136,89,45, 0,8892,9065,
chr3  49171661  49172734 KLHDC8B|NM_173546.3|non-overlapping|CTG 0 +  49171661  49171661 0,0,0  2 24,99, 0,974,
chr3  49172650  49172734 KLHDC8B|NM_173546.3|non-overlapping|CTG 0 +  49172650  49172650 0,0,0  1 84, 0,
chr3  49172678  49172696 KLHDC8B|NM_173546.3|non-overlapping|CTG 0 +  49172678  49172678 0,0,0  1 18, 0,
chr3  49172692  49172734 KLHDC8B|NM_173546.3|non-overlapping|ATG 0 +  49172692  49172692 0,0,0  1 42, 0,
chr3  49470185  49470320 DAG1|NM_004393.6|non-overlapping|CTG 0 +  49470185  49470185 0,0,0  1 135, 0,
chr3  49470276  49510459 DAG1|NM_004393.6|non-overlapping|ACG 0 +  49470276  49470276 0,0,0  2 157,41, 0,40142,
chr3  49470328  49510517 DAG1|NM_004393.6|non-overlapping|GTG 0 +  49470328  49470328 0,0,0  2 105,99, 0,40090,
chr3  49510435  49510459 DAG1|NM_004393.6|non-overlapping|ATG 0 +  49510435  49510435 0,0,0  1 24, 0,
chr3  51983349  51983568 ACY1|NM_000666.3|non-overlapping|CTG 0 +  51983349  51983349 0,0,0  1 219, 0,
chr3  51983514  51983568 ACY1|NM_000666.3|non-overlapping|CTG 0 +  51983514  51983514 0,0,0  1 54, 0,
chr3  51983551  51984068 ACY1|NM_000666.3|overlapping|CTG 0 +  51983551  51983551 0,0,0  2 38,22, 0,495,
chr3  51983564  51983588 ACY1|NM_000666.3|non-overlapping|GTG 0 +  51983564  51983564 0,0,0  1 24, 0,
chr3  53161256  53165189 PRKCD|NM_006254.4|non-overlapping|ATC 0 +  53161256  53161256 0,0,0  2 172,86, 0,3847,
chr3  53161321  53165167 PRKCD|NM_006254.4|non-overlapping|TTG 0 +  53161321  53161321 0,0,0  2 107,64, 0,3782,
chr3  53161403  53165189 PRKCD|NM_006254.4|non-overlapping|TTG 0 +  53161403  53161403 0,0,0  2 25,86, 0,3700,
chr3  66221015  66221072 SLC25A26|NM_173471.4|non-overlapping|ATG 0 +  66221015  66221015 0,0,0  1 57, 0,
chr3  93980190  93980259 ARL13B|NM_182896.3|non-overlapping|GTG 0 +  93980190  93980190 0,0,0  1 69, 0,
chr3  97764778  97764880 ARL6|NM_177976.3|non-overlapping|ATG 0 +  97764778  97764778 0,0,0  1 102, 0,
chr3  97764876  97768091 ARL6|NM_177976.3|non-overlapping|CTG 0 +  97764876  97764876 0,0,0  3 101,59,11, 0,1755,3204,
chr3 100709506 100713667 TFG|NM_006070.6|non-overlapping|CTG 0 + 100709506 100709506 0,0,0  2 215,25, 0,4136,
chr3 100709539 100713667 TFG|NM_006070.6|non-overlapping|TTG 0 + 100709539 100709539 0,0,0  2 182,25, 0,4103,
chr3 100709641 100713667 TFG|NM_006070.6|non-overlapping|ACG 0 + 100709641 100709641 0,0,0  2 80,25, 0,4001,
chr3 100709672 100713653 TFG|NM_006070.6|non-overlapping|ATT 0 + 100709672 100709672 0,0,0  2 49,11, 0,3970,
chr3 100709685 100713768 TFG|NM_006070.6|overlapping|CTG 0 + 100709685 100709685 0,0,0  2 36,126, 0,3957,
chr3 100713655 100713667 TFG|NM_006070.6|non-overlapping|TTG 0 + 100713655 100713655 0,0,0  1 12, 0,
chr3 100709588 100713653 TFG|NM_006070.6|non-overlapping|GTG 0 + 100709588 100709588 0,0,0  2 133,11, 0,4054,
chr3 101561882 101564810 TRMT10C|NM_017819.4|overlapping|CTG 0 + 101561882 101561882 0,0,0  2 121,41, 0,2887,
chr3 101561894 101564810 TRMT10C|NM_017819.4|overlapping|CTG 0 + 101561894 101561894 0,0,0  2 109,41, 0,2875,
chr3 101561920 101564803 TRMT10C|NM_017819.4|overlapping|CTG 0 + 101561920 101561920 0,0,0  2 83,34, 0,2849,
chr3 101561932 101564803 TRMT10C|NM_017819.4|overlapping|ACG 0 + 101561932 101561932 0,0,0  2 71,34, 0,2837,
chr3 119498631 119498691 TIMMDC1|NM_016589.4|non-overlapping|ATG 0 + 119498631 119498631 0,0,0  1 60, 0,
chr3 122325264 122325315 CSTA|NM_005213.4|overlapping|CTG 0 + 122325264 122325264 0,0,0  1 51, 0,
chr3 128879638 128879650 ACAD9|NM_014049.5|non-overlapping|CTG 0 + 128879638 128879638 0,0,0  1 12, 0,
chr3 128879660 128884681 ACAD9|NM_014049.5|overlapping|CTG 0 + 128879660 128879660 0,0,0  2 181,29, 0,4992,
chr3 128879672 128884681 ACAD9|NM_014049.5|overlapping|CTG 0 + 128879672 128879672 0,0,0  2 169,29, 0,4980,
chr3 132660354 132660387 UBA5|NM_024818.6|non-overlapping|CTG 0 + 132660354 132660354 0,0,0  1 33, 0,
chr3 132660371 132660422 UBA5|NM_024818.6|non-overlapping|ACG 0 + 132660371 132660371 0,0,0  1 51, 0,
chr3 132660391 132660667 UBA5|NM_024818.6|overlapping|CTG 0 + 132660391 132660391 0,0,0  1 276, 0,
chr3 132660413 132660422 UBA5|NM_024818.6|non-overlapping|CTG 0 + 132660413 132660413 0,0,0  1 9, 0,
chr3 132660437 132665867 UBA5|NM_024818.6|overlapping|GTG 0 + 132660437 132660437 0,0,0  2 261,45, 0,5385,
chr3 134486155 134486206 CEP63|NM_025180.5|non-overlapping|CTG 0 + 134486155 134486155 0,0,0  1 51, 0,
chr3 134486339 134488068 CEP63|NM_025180.5|non-overlapping|ATG 0 + 134486339 134486339 0,0,0  2 217,50, 0,1679,
chr3 148991467 148991503 GYG1|NM_004130.4|non-overlapping|ATG 0 + 148991467 148991467 0,0,0  1 36, 0,
chr3 148991558 148991606 GYG1|NM_004130.4|non-overlapping|CTG 0 + 148991558 148991558 0,0,0  1 48, 0,
chr3 148991602 148991644 GYG1|NM_004130.4|overlapping|CTG 0 + 148991602 148991602 0,0,0  1 42, 0,
chr3 158644585 158644615 GFM1|NM_024996.7|non-overlapping|CTG 0 + 158644585 158644585 0,0,0  1 30, 0,
chr3 158644603 158644615 GFM1|NM_024996.7|non-overlapping|ACG 0 + 158644603 158644603 0,0,0  1 12, 0,
chr4    337940    337955 ZNF141|NM_003441.4|non-overlapping|ATG 0 +    337940    337940 0,0,0  1 15, 0,
chr4   1347310   1347760 UVSSA|NM_020894.4|non-overlapping|CTG 0 +   1347310   1347310 0,0,0  1 450, 0,
chr4  15469905  15469977 CC2D2A|NM_001080522.2|non-overlapping|ATG 0 +  15469905  15469905 0,0,0  1 72, 0,
chr4  39459095  39459104 LIAS|NM_006859.4|non-overlapping|CTG 0 +  39459095  39459095 0,0,0  1 9, 0,
chr4  40197076  40197178 RHOH|NM_004310.5|non-overlapping|ATC 0 +  40197076  40197076 0,0,0  1 102, 0,
chr4  40197084  40197246 RHOH|NM_004310.5|non-overlapping|GTG 0 +  40197084  40197084 0,0,0  1 162, 0,
chr4  40197130  40197178 RHOH|NM_004310.5|non-overlapping|GTG 0 +  40197130  40197130 0,0,0  1 48, 0,
chr4  40197261  40243188 RHOH|NM_004310.5|non-overlapping|ATT 0 +  40197261  40197261 0,0,0  3 39,121,11, 0,45452,45916,
chr4  40242721  40242745 RHOH|NM_004310.5|non-overlapping|ATG 0 +  40242721  40242721 0,0,0  1 24, 0,
chr4  40243306  40243333 RHOH|NM_004310.5|non-overlapping|ATG 0 +  40243306  40243306 0,0,0  1 27, 0,
chr4  40243378  40243393 RHOH|NM_004310.5|overlapping|CTG 0 +  40243378  40243378 0,0,0  1 15, 0,
chr4  41990566  41990632 SLC30A9|NM_006345.4|non-overlapping|ATG 0 +  41990566  41990566 0,0,0  1 66, 0,
chr4  44678462  44678603 GUF1|NM_021927.3|non-overlapping|CTG 0 +  44678462  44678462 0,0,0  1 141, 0,
chr4  44678524  44680528 GUF1|NM_021927.3|overlapping|CTG 0 +  44678524  44678524 0,0,0  2 263,88, 0,1916,
chr4  44678570  44678603 GUF1|NM_021927.3|non-overlapping|ATG 0 +  44678570  44678570 0,0,0  1 33, 0,
chr4  55396054  55396075 TMEM165|NM_018475.5|non-overlapping|ATG 0 +  55396054  55396054 0,0,0  1 21, 0,
chr4  55948953  55948962 CEP135|NM_025009.5|non-overlapping|CTG 0 +  55948953  55948953 0,0,0  1 9, 0,
chr4  55949019  55952093 CEP135|NM_025009.5|non-overlapping|ATG 0 +  55949019  55949019 0,0,0  2 40,8, 0,3066,
chr4  78057654  78057681 FRAS1|NM_025074.7|non-overlapping|ATG 0 +  78057654  78057654 0,0,0  1 27, 0,
chr4  78057753  78057798 FRAS1|NM_025074.7|non-overlapping|TTG 0 +  78057753  78057753 0,0,0  1 45, 0,
chr4  78057966  78237562 FRAS1|NM_025074.7|overlapping|ATG 0 +  78057966  78057966 0,0,0  3 119,32,53, 0,8018,179543,
chr4  80197662  80197677 PRDM8|NM_020226.4|non-overlapping|ATG 0 +  80197662  80197662 0,0,0  1 15, 0,
chr4  80266711  80266828 FGF5|NM_004464.3|overlapping|ATG 0 +  80266711  80266711 0,0,0  1 117, 0,
chr4 102869034 102869115 CISD2|NM_001008388.5|overlapping|TTG 0 + 102869034 102869034 0,0,0  1 81, 0,
chr4 102869065 102869158 CISD2|NM_001008388.5|overlapping|GTG 0 + 102869065 102869065 0,0,0  1 93, 0,
chr4 106316044 106325020 AIMP1|NM_004757.4|overlapping|CTG 0 + 106316044 106316044 0,0,0  2 300,36, 0,8940,
chr4 106316048 106316330 AIMP1|NM_004757.4|non-overlapping|ATT 0 + 106316048 106316048 0,0,0  1 282, 0,
chr4 106316099 106316330 AIMP1|NM_004757.4|non-overlapping|ACG 0 + 106316099 106316099 0,0,0  1 231, 0,
chr4 106316122 106325020 AIMP1|NM_004757.4|overlapping|AAG 0 + 106316122 106316122 0,0,0  2 222,36, 0,8862,
chr4 106316132 106316330 AIMP1|NM_004757.4|non-overlapping|AGG 0 + 106316132 106316132 0,0,0  1 198, 0,
chr4 106316189 106316330 AIMP1|NM_004757.4|non-overlapping|ATC 0 + 106316189 106316189 0,0,0  1 141, 0,
chr4 107931564 107931933 CYP2U1|NM_183075.3|overlapping|CTG 0 + 107931564 107931564 0,0,0  1 369, 0,
chr4 112637147 112637162 LARP7|NM_016648.4|non-overlapping|ATG 0 + 112637147 112637147 0,0,0  1 15, 0,
chr4 112637190 112637214 LARP7|NM_016648.4|non-overlapping|ATG 0 + 112637190 112637190 0,0,0  1 24, 0,
chr4 121801367 121801415 EXOSC9|NM_001034194.2|non-overlapping|ATC 0 + 121801367 121801367 0,0,0  1 48, 0,
chr4 122170622 122170667 KIAA1109|NM_015312.4|overlapping|ATG 0 + 122170622 122170622 0,0,0  1 45, 0,
chr4 122732750 122732786 BBS12|NM_152618.3|non-overlapping|ATG 0 + 122732750 122732750 0,0,0  1 36, 0,
chr4 127632965 127633001 INTU|NM_015693.4|non-overlapping|ATG 0 + 127632965 127632965 0,0,0  1 36, 0,
chr4 127880936 127881026 PLK4|NM_014264.5|non-overlapping|ATG 0 + 127880936 127880936 0,0,0  1 90, 0,
chr4 139453883 139453934 RAB33B|NM_031296.3|non-overlapping|CTG 0 + 139453883 139453883 0,0,0  1 51, 0,
chr4 139454129 139454138 RAB33B|NM_031296.3|non-overlapping|GTG 0 + 139454129 139454129 0,0,0  1 9, 0,
chr4 145639090 145639132 MMAA|NM_172250.3|non-overlapping|TTG 0 + 145639090 145639090 0,0,0  1 42, 0,
chr4 155666878 155696785 GUCY1A1|NM_000856.6|non-overlapping|CTG 0 + 155666878 155666878 0,0,0  4 87,74,94,30, 0,467,1211,29877,
chr4 155667357 155696785 GUCY1A1|NM_000856.6|non-overlapping|AGG 0 + 155667357 155667357 0,0,0  3 62,94,30, 0,732,29398,
chr4 155696787 155696853 GUCY1A1|NM_000856.6|non-overlapping|GTG 0 + 155696787 155696787 0,0,0  1 66, 0,
chr4 157076216 157076228 GLRB|NM_000824.5|non-overlapping|CTG 0 + 157076216 157076216 0,0,0  1 12, 0,
chr4 157076274 157078008 GLRB|NM_000824.5|non-overlapping|ATT 0 + 157076274 157076274 0,0,0  2 23,13, 0,1721,
chr4 158672159 158672225 ETFDH|NM_004453.4|non-overlapping|GTG 0 + 158672159 158672159 0,0,0  1 66, 0,
chr4 158672221 158672299 ETFDH|NM_004453.4|non-overlapping|ATG 0 + 158672221 158672221 0,0,0  1 78, 0,
chr4 158672257 158672299 ETFDH|NM_004453.4|non-overlapping|ATG 0 + 158672257 158672257 0,0,0  1 42, 0,
chr4 158672362 158672383 ETFDH|NM_004453.4|non-overlapping|ATG 0 + 158672362 158672362 0,0,0  1 21, 0,
chr4 165327705 165333367 MSMO1|NM_006745.5|non-overlapping|TTG 0 + 165327705 165327705 0,0,0  2 59,28, 0,5634,
chr4 165327714 165333367 MSMO1|NM_006745.5|non-overlapping|CTG 0 + 165327714 165327714 0,0,0  2 50,28, 0,5625,
chr4 165327747 165333367 MSMO1|NM_006745.5|non-overlapping|ATC 0 + 165327747 165327747 0,0,0  2 17,28, 0,5592,
chr4 183659398 183663857 TRAPPC11|NM_021942.6|non-overlapping|CTG 0 + 183659398 183659398 0,0,0  2 49,11, 0,4448,
chr5   7870781   7870790 MTRR|NM_002454.3|non-overlapping|ATG 0 +   7870781   7870781 0,0,0  1 9, 0,
chr5  14664742  14664829 OTULIN|NM_138348.6|overlapping|CTG 0 +  14664742  14664742 0,0,0  1 87, 0,
chr5  14664755  14673644 OTULIN|NM_138348.6|overlapping|CTG 0 +  14664755  14664755 0,0,0  2 222,3, 0,8886,
chr5  14664766  14664829 OTULIN|NM_138348.6|overlapping|ACG 0 +  14664766  14664766 0,0,0  1 63, 0,
chr5  14664797  14673644 OTULIN|NM_138348.6|overlapping|CTG 0 +  14664797  14664797 0,0,0  2 180,3, 0,8844,
chr5  34929643  34929823 DNAJC21|NM_001012339.3|overlapping|CTG 0 +  34929643  34929643 0,0,0  1 180, 0,
chr5  35856937  35860879 IL7R|NM_002185.5|overlapping|CTG 0 +  35856937  35856937 0,0,0  2 122,28, 0,3914,
chr5  43602738  43609248 NNT|NM_012343.4|overlapping|CTG 0 +  43602738  43602738 0,0,0  2 152,106, 0,6404,
chr5  43602793  43602826 NNT|NM_012343.4|non-overlapping|ATG 0 +  43602793  43602793 0,0,0  1 33, 0,
chr5  43602812  43609145 NNT|NM_012343.4|non-overlapping|ATC 0 +  43602812  43602812 0,0,0  2 78,3, 0,6330,
chr5  43609161  43609248 NNT|NM_012343.4|overlapping|CTG 0 +  43609161  43609161 0,0,0  1 87, 0,
chr5  60945160  60945313 NDUFAF2|NM_174889.5|overlapping|CTG 0 +  60945160  60945160 0,0,0  1 153, 0,
chr5  64768954  64768993 CWC27|NM_005869.4|non-overlapping|ATG 0 +  64768954  64768954 0,0,0  1 39, 0,
chr5  64769028  64774722 CWC27|NM_005869.4|overlapping|CTG 0 +  64769028  64769028 0,0,0  2 160,32, 0,5662,
chr5  64769047  64769089 CWC27|NM_005869.4|non-overlapping|CTG 0 +  64769047  64769047 0,0,0  1 42, 0,
chr5  64769063  64769075 CWC27|NM_005869.4|non-overlapping|GTG 0 +  64769063  64769063 0,0,0  1 12, 0,
chr5  69415155  69419376 MARVELD2|NM_001038603.3|non-overlapping|CTG 0 +  69415155  69415155 0,0,0  2 15,6, 0,4215,
chr5  69504203  69509283 OCLN|NM_002538.4|overlapping|ATT 0 +  69504203  69504203 0,0,0  2 91,143, 0,4937,
chr5  69504213  69504228 OCLN|NM_002538.4|non-overlapping|CTG 0 +  69504213  69504213 0,0,0  1 15, 0,
chr5  71455686  71455749 BDP1|NM_018429.3|non-overlapping|ATG 0 +  71455686  71455686 0,0,0  1 63, 0,
chr5  71587355  71592969 MCCC2|NM_022132.5|overlapping|AGG 0 +  71587355  71587355 0,0,0  2 199,44, 0,5570,
chr5  83077547  83077565 XRCC4|NM_022406.5|non-overlapping|TTG 0 +  83077547  83077547 0,0,0  1 18, 0,
chr5  83077583  83104916 XRCC4|NM_022406.5|non-overlapping|TTG 0 +  83077583  83077583 0,0,0  2 32,7, 0,27326,
chr5  96662270  96722681 CAST|NM_001042440.5|overlapping|CTG 0 +  96662270  96662270 0,0,0  4 227,63,72,43, 0,13268,33565,60368,
chr5 110739043 110739148 SLC25A46|NM_138773.4|overlapping|CTG 0 + 110739043 110739043 0,0,0  1 105, 0,
chr5 119452511 119473914 HSD17B4|NM_000414.4|overlapping|CTG 0 + 119452511 119452511 0,0,0  3 122,54,7, 0,3803,21396,
chr5 119452538 119473914 HSD17B4|NM_000414.4|overlapping|CTG 0 + 119452538 119452538 0,0,0  3 95,54,7, 0,3776,21369,
chr5 127290926 127331394 MEGF10|NM_032446.3|overlapping|ATT 0 + 127290926 127290926 0,0,0  3 130,51,104, 0,9069,40364,
chr5 132369780 132369795 SLC22A5|NM_003060.4|non-overlapping|GTG 0 + 132369780 132369780 0,0,0  1 15, 0,
chr5 132369823 132369994 SLC22A5|NM_003060.4|overlapping|GTG 0 + 132369823 132369823 0,0,0  1 171, 0,
chr5 132369874 132369994 SLC22A5|NM_003060.4|overlapping|CTG 0 + 132369874 132369874 0,0,0  1 120, 0,
chr5 132866636 132866979 UQCRQ|NM_014402.5|overlapping|ATG 0 + 132866636 132866636 0,0,0  2 51,111, 0,232,
chr5 132866666 132866979 UQCRQ|NM_014402.5|overlapping|GTG 0 + 132866666 132866666 0,0,0  2 21,111, 0,202,
chr5 138439099 138444432 REEP2|NM_001271803.2|overlapping|CTG 0 + 138439099 138439099 0,0,0  4 141,73,77,18, 0,1916,2285,5315,
chr5 138439156 138444432 REEP2|NM_001271803.2|overlapping|CTG 0 + 138439156 138439156 0,0,0  4 84,73,77,18, 0,1859,2228,5258,
chr5 140691515 140691590 HARS2|NM_012208.4|non-overlapping|GTG 0 + 140691515 140691515 0,0,0  1 75, 0,
chr5 149960764 149981813 SLC26A2|NM_000112.4|CDS_extension|CTG 0 + 149960764 149960764 0,0,0  3 215,724,1521, 0,16863,19528,
chr5 149960856 149960886 SLC26A2|NM_000112.4|non-overlapping|ATG 0 + 149960856 149960856 0,0,0  1 30, 0,
chr5 149960925 149977669 SLC26A2|NM_000112.4|overlapping|GTG 0 + 149960925 149960925 0,0,0  2 54,42, 0,16702,
chr5 150520877 150520895 NDST1|NM_001543.5|non-overlapping|GTG 0 + 150520877 150520877 0,0,0  1 18, 0,
chr5 150520900 150520966 NDST1|NM_001543.5|non-overlapping|ATG 0 + 150520900 150520900 0,0,0  1 66, 0,
chr5 150521013 150521025 NDST1|NM_001543.5|non-overlapping|ATG 0 + 150521013 150521013 0,0,0  1 12, 0,
chr5 150521155 150521209 NDST1|NM_001543.5|non-overlapping|TTG 0 + 150521155 150521155 0,0,0  1 54, 0,
chr5 157180894 157180936 ITK|NM_005546.4|non-overlapping|TTG 0 + 157180894 157180894 0,0,0  1 42, 0,
chr5 157180942 157180981 ITK|NM_005546.4|overlapping|ATG 0 + 157180942 157180942 0,0,0  1 39, 0,
chr5 168486490 168488623 RARS|NM_002887.4|overlapping|ATG 0 + 168486490 168486490 0,0,0  2 53,22, 0,2111,
chr5 169637286 169637349 DOCK2|NM_004946.3|overlapping|ACG 0 + 169637286 169637286 0,0,0  1 63, 0,
chr5 177600187 177604486 B4GALT7|NM_007255.3|overlapping|ATG 0 + 177600187 177600187 0,0,0  2 73,308, 0,3991,
chr6   5261531   5261564 FARS2|NM_006567.5|non-overlapping|ATG 0 +   5261531   5261531 0,0,0  1 33, 0,
chr6  31740017  31741215 MSH5|NM_025259.6|overlapping|GTG 0 +  31740017  31740017 0,0,0  3 45,160,53, 0,436,1145,
chr6  33621393  33621606 ITPR3|NM_002224.4|overlapping|ACG 0 +  33621393  33621393 0,0,0  1 213, 0,
chr6  33621440  33621545 ITPR3|NM_002224.4|non-overlapping|CTG 0 +  33621440  33621440 0,0,0  1 105, 0,
chr6  33621487  33621565 ITPR3|NM_002224.4|non-overlapping|ATC 0 +  33621487  33621487 0,0,0  1 78, 0,
chr6  33621494  33621545 ITPR3|NM_002224.4|non-overlapping|GTG 0 +  33621494  33621494 0,0,0  1 51, 0,
chr6  33621541  33621565 ITPR3|NM_002224.4|non-overlapping|CTG 0 +  33621541  33621541 0,0,0  1 24, 0,
chr6  33621553  33621565 ITPR3|NM_002224.4|non-overlapping|ACG 0 +  33621553  33621553 0,0,0  1 12, 0,
chr6  35452402  35452495 FANCE|NM_021922.3|non-overlapping|ACG 0 +  35452402  35452402 0,0,0  1 93, 0,
chr6  35452416  35452422 FANCE|NM_021922.3|non-overlapping|TTG 0 +  35452416  35452416 0,0,0  1 6, 0,
chr6  35452428  35452500 FANCE|NM_021922.3|non-overlapping|CTG 0 +  35452428  35452428 0,0,0  1 72, 0,
chr6  35452434  35452500 FANCE|NM_021922.3|non-overlapping|CTG 0 +  35452434  35452434 0,0,0  1 66, 0,
chr6  35452465  35452495 FANCE|NM_021922.3|non-overlapping|CTG 0 +  35452465  35452465 0,0,0  1 30, 0,
chr6  35452496  35452580 FANCE|NM_021922.3|overlapping|CTG 0 +  35452496  35452496 0,0,0  1 84, 0,
chr6  43576231  43576300 POLH|NM_001291969.2|non-overlapping|CTG 0 +  43576231  43576231 0,0,0  1 69, 0,
chr6  43576237  43576300 POLH|NM_001291969.2|non-overlapping|ACG 0 +  43576237  43576237 0,0,0  1 63, 0,
chr6  43576254  43576332 POLH|NM_001291969.2|non-overlapping|ATC 0 +  43576254  43576254 0,0,0  1 78, 0,
chr6  43576261  43576300 POLH|NM_001291969.2|non-overlapping|ACG 0 +  43576261  43576261 0,0,0  1 39, 0,
chr6  43576264  43576300 POLH|NM_001291969.2|non-overlapping|ATC 0 +  43576264  43576264 0,0,0  1 36, 0,
chr6  43576296  43576332 POLH|NM_001291969.2|non-overlapping|ATA 0 +  43576296  43576296 0,0,0  1 36, 0,
chr6  43576300  43576378 POLH|NM_001291969.2|non-overlapping|ATC 0 +  43576300  43576300 0,0,0  1 78, 0,
chr6  43576317  43576332 POLH|NM_001291969.2|non-overlapping|CTG 0 +  43576317  43576317 0,0,0  1 15, 0,
chr6  43576344  43583027 POLH|NM_001291969.2|overlapping|ATA 0 +  43576344  43576344 0,0,0  2 96,21, 0,6662,
chr6  43576344  43582414 POLH|NM_006502.3|overlapping|ATA 0 +  43576344  43576344 0,0,0  2 96,99, 0,5971,
chr6  43576350  43583027 POLH|NM_001291969.2|overlapping|AGG 0 +  43576350  43576350 0,0,0  2 90,21, 0,6656,
chr6  43576350  43582414 POLH|NM_006502.3|overlapping|AGG 0 +  43576350  43576350 0,0,0  2 90,99, 0,5965,
chr6  43576362  43583027 POLH|NM_001291969.2|overlapping|ATT 0 +  43576362  43576362 0,0,0  2 78,21, 0,6644,
chr6  43576362  43582414 POLH|NM_006502.3|overlapping|ATT 0 +  43576362  43576362 0,0,0  2 78,99, 0,5953,
chr6  43576392  43583027 POLH|NM_001291969.2|overlapping|ATT 0 +  43576392  43576392 0,0,0  2 48,21, 0,6614,
chr6  43576392  43582414 POLH|NM_006502.3|overlapping|ATT 0 +  43576392  43576392 0,0,0  2 48,99, 0,5923,
chr6  73461762  73461798 MTO1|NM_012123.4|non-overlapping|ATG 0 +  73461762  73461762 0,0,0  1 36, 0,
chr6  75749255  75749387 MYO6|NM_004999.4|non-overlapping|CTG 0 +  75749255  75749255 0,0,0  1 132, 0,
chr6 107490192 107490225 SOBP|NM_018013.4|non-overlapping|ATG 0 + 107490192 107490192 0,0,0  1 33, 0,
chr6 107490217 107490436 SOBP|NM_018013.4|non-overlapping|ATG 0 + 107490217 107490217 0,0,0  1 219, 0,
chr6 116370985 116371051 DSE|NM_013352.4|non-overlapping|ATG 0 + 116370985 116370985 0,0,0  1 66, 0,
chr6 116399209 116399254 DSE|NM_013352.4|overlapping|ATG 0 + 116399209 116399209 0,0,0  1 45, 0,
chr6 128883207 129049938 LAMA2|NM_000426.4|overlapping|CTG 0 + 128883207 128883207 0,0,0  2 150,21, 0,166710,
chr6 136822601 136825247 PEX7|NM_000288.4|overlapping|GTG 0 + 136822601 136822601 0,0,0  2 194,34, 0,2612,
chr6 136822619 136825247 PEX7|NM_000288.4|overlapping|ACG 0 + 136822619 136822619 0,0,0  2 176,34, 0,2594,
chr6 142302065 142302200 ADGRG6|NM_198569.3|non-overlapping|CTG 0 + 142302065 142302065 0,0,0  1 135, 0,
chr6 142302091 142302322 ADGRG6|NM_198569.3|non-overlapping|CTG 0 + 142302091 142302091 0,0,0  1 231, 0,
chr6 142302102 142302132 ADGRG6|NM_198569.3|non-overlapping|CTG 0 + 142302102 142302102 0,0,0  1 30, 0,
chr6 142302128 142302200 ADGRG6|NM_198569.3|non-overlapping|CTG 0 + 142302128 142302128 0,0,0  1 72, 0,
chr6 142302135 142302180 ADGRG6|NM_198569.3|non-overlapping|CTG 0 + 142302135 142302135 0,0,0  1 45, 0,
chr6 142302176 142302200 ADGRG6|NM_198569.3|non-overlapping|ATG 0 + 142302176 142302176 0,0,0  1 24, 0,
chr6 142302191 142302200 ADGRG6|NM_198569.3|non-overlapping|ACG 0 + 142302191 142302191 0,0,0  1 9, 0,
chr6 142302225 142309545 ADGRG6|NM_198569.3|overlapping|CTG 0 + 142302225 142302225 0,0,0  2 106,2, 0,7318,
chr6 142302286 142302322 ADGRG6|NM_198569.3|non-overlapping|ATG 0 + 142302286 142302286 0,0,0  1 36, 0,
chr6 143450884 143451016 PEX3|NM_003630.3|non-overlapping|GTG 0 + 143450884 143450884 0,0,0  1 132, 0,
chr6 143450906 143450975 PEX3|NM_003630.3|non-overlapping|ACG 0 + 143450906 143450906 0,0,0  1 69, 0,
chr6 143450941 143451016 PEX3|NM_003630.3|non-overlapping|ACG 0 + 143450941 143450941 0,0,0  1 75, 0,
chr6 143450993 143459187 PEX3|NM_003630.3|overlapping|GTG 0 + 143450993 143450993 0,0,0  2 122,103, 0,8091,
chr7   2558988   2559033 IQCE|NM_152558.5|non-overlapping|ATG 0 +   2558988   2558988 0,0,0  1 45, 0,
chr7   2559051   2559156 IQCE|NM_152558.5|non-overlapping|ATG 0 +   2559051   2559051 0,0,0  1 105, 0,
chr7   2559134   2571618 IQCE|NM_152558.5|overlapping|ACG 0 +   2559134   2559134 0,0,0  4 83,48,46,93, 0,7981,9819,12391,
chr7   4775663   4781222 AP5Z1|NM_014855.3|overlapping|CTG 0 +   4775663   4775663 0,0,0  2 93,48, 0,5511,
chr7   4775672   4781222 AP5Z1|NM_014855.3|overlapping|CTG 0 +   4775672   4775672 0,0,0  2 84,48, 0,5502,
chr7   6009280   6009307 AIMP2|NM_006303.4|non-overlapping|GTG 0 +   6009280   6009280 0,0,0  1 27, 0,
chr7   6009296   6009317 AIMP2|NM_006303.4|non-overlapping|GTG 0 +   6009296   6009296 0,0,0  1 21, 0,
chr7   6009320   6015156 AIMP2|NM_006303.4|overlapping|TTG 0 +   6009320   6009320 0,0,0  2 178,11, 0,5825,
chr7  17298725  17298731 AHR|NM_001621.5|non-overlapping|GTG 0 +  17298725  17298725 0,0,0  1 6, 0,
chr7  17298742  17298913 AHR|NM_001621.5|non-overlapping|CTG 0 +  17298742  17298742 0,0,0  1 171, 0,
chr7  17298761  17298887 AHR|NM_001621.5|non-overlapping|GTG 0 +  17298761  17298761 0,0,0  1 126, 0,
chr7  17298797  17298887 AHR|NM_001621.5|non-overlapping|CTG 0 +  17298797  17298797 0,0,0  1 90, 0,
chr7  17298957  17298984 AHR|NM_001621.5|non-overlapping|ATT 0 +  17298957  17298957 0,0,0  1 27, 0,
chr7  17299064  17299268 AHR|NM_001621.5|overlapping|CTG 0 +  17299064  17299064 0,0,0  1 204, 0,
chr7  23246792  23246825 GPNMB|NM_001005340.2|non-overlapping|TTG 0 +  23246792  23246792 0,0,0  1 33, 0,
chr7  23246828  23253351 GPNMB|NM_001005340.2|overlapping|TTG 0 +  23246828  23246828 0,0,0  2 99,45, 0,6478,
chr7  26292011  26361006 SNX10|NM_001199835.1|overlapping|TTG 0 +  26292011  26292011 0,0,0  3 122,47,32, 0,54408,68963,
chr7  26292062  26361006 SNX10|NM_001199835.1|overlapping|CTG 0 +  26292062  26292062 0,0,0  3 71,47,32, 0,54357,68912,
chr7  33129681  33129768 BBS9|NM_198428.3|non-overlapping|GTG 0 +  33129681  33129681 0,0,0  1 87, 0,
chr7  44104403  44104808 AEBP1|NM_001129.5|overlapping|ATT 0 +  44104403  44104403 0,0,0  1 405, 0,
chr7  44104449  44104623 AEBP1|NM_001129.5|non-overlapping|CTG 0 +  44104449  44104449 0,0,0  1 174, 0,
chr7  44104561  44104753 AEBP1|NM_001129.5|overlapping|CTG 0 +  44104561  44104561 0,0,0  1 192, 0,
chr7  44606632  44707999 OGDH|NM_002541.4|CDS_extension|GTG 0 +  44606632  44606632 0,0,0 23 21,249,192,103,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,121, 0,17684,38694,41024,60103,67154,67778,68545,69337,75087,87192,87791,89392,89796,90281,90737,90971,91559,93508,94910,100592,100949,101246,
chr7  44606638  44707999 OGDH|NM_002541.4|CDS_extension|CTG 0 +  44606638  44606638 0,0,0 23 15,249,192,103,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,121, 0,17678,38688,41018,60097,67148,67772,68539,69331,75081,87186,87785,89386,89790,90275,90731,90965,91553,93502,94904,100586,100943,101240,
chr7  45574532  45574730 ADCY1|NM_021116.4|overlapping|ATG 0 +  45574532  45574532 0,0,0  1 198, 0,
chr7  66075840  66081992 ASL|NM_000048.4|overlapping|GTG 0 +  66075840  66075840 0,0,0  3 16,55,190, 0,198,5962,
chr7  66076064  66081992 ASL|NM_000048.4|overlapping|ACG 0 +  66076064  66076064 0,0,0  2 29,190, 0,5738,
chr7  66628977  66629001 KCTD7|NM_153033.5|non-overlapping|ATG 0 +  66628977  66628977 0,0,0  1 24, 0,
chr7  76048087  76054840 MDH2|NM_005918.4|overlapping|GTG 0 +  76048087  76048087 0,0,0  2 139,11, 0,6742,
chr7  76048126  76054840 MDH2|NM_005918.4|overlapping|GTG 0 +  76048126  76048126 0,0,0  2 100,11, 0,6703,
chr7  87934293  87934305 ADAM22|NM_021723.5|non-overlapping|ATG 0 +  87934293  87934293 0,0,0  1 12, 0,
chr7  87934420  87934432 ADAM22|NM_021723.5|non-overlapping|ATG 0 +  87934420  87934420 0,0,0  1 12, 0,
chr7  92447502  92447745 GATAD1|NM_021167.5|overlapping|GTG 0 +  92447502  92447502 0,0,0  1 243, 0,
chr7  92447566  92448756 GATAD1|NM_021167.5|overlapping|ACG 0 +  92447566  92447566 0,0,0  2 412,5, 0,1185,
chr7  92447608  92448756 GATAD1|NM_021167.5|overlapping|GTG 0 +  92447608  92447608 0,0,0  2 370,5, 0,1143,
chr7  92447634  92447745 GATAD1|NM_021167.5|overlapping|ATC 0 +  92447634  92447634 0,0,0  1 111, 0,
chr7  92447644  92448756 GATAD1|NM_021167.5|overlapping|GTG 0 +  92447644  92447644 0,0,0  2 334,5, 0,1107,
chr7 100101592 100101622 AP4M1|NM_004722.4|non-overlapping|CTG 0 + 100101592 100101592 0,0,0  1 30, 0,
chr7 100101692 100102953 AP4M1|NM_004722.4|overlapping|TTG 0 + 100101692 100101692 0,0,0  4 80,89,107,90, 0,187,982,1171,
chr7 101127151 101127172 SERPINE1|NM_000602.5|non-overlapping|ACG 0 + 101127151 101127151 0,0,0  1 21, 0,
chr7 101127231 101128424 SERPINE1|NM_000602.5|overlapping|CTG 0 + 101127231 101127231 0,0,0  2 13,32, 0,1161,
chr7 101154476 101156594 AP1S1|NM_001283.5|overlapping|GTG 0 + 101154476 101154476 0,0,0  2 41,1, 0,2117,
chr7 101154485 101156594 AP1S1|NM_001283.5|overlapping|GTG 0 + 101154485 101154485 0,0,0  2 32,1, 0,2108,
chr7 116672204 116672492 MET|NM_001127500.3|non-overlapping|CTG 0 + 116672204 116672204 0,0,0  1 288, 0,
chr7 116672239 116672305 MET|NM_001127500.3|non-overlapping|CTG 0 + 116672239 116672239 0,0,0  1 66, 0,
chr7 116672293 116672305 MET|NM_001127500.3|non-overlapping|ATG 0 + 116672293 116672293 0,0,0  1 12, 0,
chr7 134646853 134658386 BPGM|NM_199186.3|non-overlapping|ATG 0 + 134646853 134646853 0,0,0  2 84,39, 0,11494,
chr7 134646862 134658386 BPGM|NM_199186.3|non-overlapping|AGG 0 + 134646862 134646862 0,0,0  2 75,39, 0,11485,
chr7 134646870 134658358 BPGM|NM_199186.3|non-overlapping|CTG 0 + 134646870 134646870 0,0,0  2 67,11, 0,11477,
chr8   1763806   1770936 CLN8|NM_018941.4|non-overlapping|ATG 0 +   1763806   1763806 0,0,0  2 79,5, 0,7125,
chr8  15540252  15540462 TUSC3|NM_006765.4|overlapping|ATG 0 +  15540252  15540252 0,0,0  1 210, 0,
chr8  15540351  15540462 TUSC3|NM_006765.4|overlapping|CTG 0 +  15540351  15540351 0,0,0  1 111, 0,
chr8  15540365  15623089 TUSC3|NM_006765.4|overlapping|GTG 0 +  15540365  15540365 0,0,0  2 203,10, 0,82714,
chr8  17247009  17247066 VPS37A|NM_152415.3|non-overlapping|GTG 0 +  17247009  17247009 0,0,0  1 57, 0,
chr8  17247019  17247109 VPS37A|NM_152415.3|non-overlapping|CTG 0 +  17247019  17247019 0,0,0  1 90, 0,
chr8  17247067  17247109 VPS37A|NM_152415.3|non-overlapping|ATG 0 +  17247067  17247067 0,0,0  1 42, 0,
chr8  22165352  22173643 BMP1|NM_006129.5|overlapping|ACG 0 +  22165352  22165352 0,0,0  2 201,42, 0,8249,
chr8  28701519  28701648 EXTL3|NM_001440.4|non-overlapping|ATG 0 +  28701519  28701519 0,0,0  1 129, 0,
chr8  28701588  28701648 EXTL3|NM_001440.4|non-overlapping|ACG 0 +  28701588  28701588 0,0,0  1 60, 0,
chr8  28713467  28713509 EXTL3|NM_001440.4|non-overlapping|CTG 0 +  28713467  28713467 0,0,0  1 42, 0,
chr8  28713508  28715590 EXTL3|NM_001440.4|non-overlapping|ATG 0 +  28713508  28713508 0,0,0  2 42,6, 0,2076,
chr8  28715615  28715732 EXTL3|NM_001440.4|non-overlapping|CTG 0 +  28715615  28715615 0,0,0  1 117, 0,
chr8  28715654  28715732 EXTL3|NM_001440.4|non-overlapping|GTG 0 +  28715654  28715654 0,0,0  1 78, 0,
chr8  28715667  28715718 EXTL3|NM_001440.4|non-overlapping|ATG 0 +  28715667  28715667 0,0,0  1 51, 0,
chr8  28715707  28715902 EXTL3|NM_001440.4|non-overlapping|ATG 0 +  28715707  28715707 0,0,0  1 195, 0,
chr8  28715793  28715826 EXTL3|NM_001440.4|non-overlapping|ATG 0 +  28715793  28715793 0,0,0  1 33, 0,
chr8  28716012  28716033 EXTL3|NM_001440.4|non-overlapping|ATG 0 +  28716012  28716012 0,0,0  1 21, 0,
chr8  31033890  31058435 WRN|NM_000553.6|non-overlapping|ATG 0 +  31033890  31033890 0,0,0  2 83,64, 0,24481,
chr8  31033958  31058455 WRN|NM_000553.6|overlapping|CTG 0 +  31033958  31033958 0,0,0  2 15,84, 0,24413,
chr8  31058402  31058435 WRN|NM_000553.6|non-overlapping|ATG 0 +  31058402  31058402 0,0,0  1 33, 0,
chr8  37762604  37762613 PLPBP|NM_007198.4|non-overlapping|ATG 0 +  37762604  37762604 0,0,0  1 9, 0,
chr8  38231706  38231787 DDHD2|NM_015214.3|non-overlapping|GTG 0 +  38231706  38231706 0,0,0  1 81, 0,
chr8  43093532  43122877 POMK|NM_032237.5|CDS_extension|GTG 0 +  43093532  43093532 0,0,0  5 31,92,96,303,771, 0,3991,8972,9995,28574,
chr8  43097533  43097548 POMK|NM_032237.5|non-overlapping|CTG 0 +  43097533  43097533 0,0,0  1 15, 0,
chr8  43097556  43102538 POMK|NM_032237.5|non-overlapping|ATG 0 +  43097556  43097556 0,0,0  2 59,34, 0,4948,
chr8  47960965  47962088 MCM4|NM_005914.4|overlapping|GTG 0 +  47960965  47960965 0,0,0  3 249,165,36, 0,550,1087,
chr8  73976234  73976282 TMEM70|NM_017866.6|non-overlapping|GTG 0 +  73976234  73976234 0,0,0  1 48, 0,
chr8  85464058  85465370 CA2|NM_000067.3|overlapping|CTG 0 +  85464058  85464058 0,0,0  2 57,99, 0,1213,
chr8  93700598  93701358 FAM92A|NM_145269.5|overlapping|ATC 0 +  93700598  93700598 0,0,0  2 75,135, 0,625,
chr8  93917019  93922111 PDP1|NM_018444.4|overlapping|GTG 0 +  93917019  93917019 0,0,0  2 60,96, 0,4996,
chr8  93922054  93922111 PDP1|NM_018444.4|overlapping|ATG 0 +  93922054  93922054 0,0,0  1 57, 0,
chr8  94641203  94641398 ESRP1|NM_017697.4|overlapping|GTG 0 +  94641203  94641203 0,0,0  1 195, 0,
chr8  99013318  99038466 VPS13B|NM_017890.5|overlapping|GTG 0 +  99013318  99013318 0,0,0  3 29,176,44, 0,441,25104,
chr8 103298854 103298953 FZD6|NM_003506.4|non-overlapping|ATC 0 + 103298854 103298854 0,0,0  1 99, 0,
chr8 103298875 103298953 FZD6|NM_003506.4|non-overlapping|GTG 0 + 103298875 103298875 0,0,0  1 78, 0,
chr8 103298905 103298953 FZD6|NM_003506.4|non-overlapping|ACG 0 + 103298905 103298905 0,0,0  1 48, 0,
chr8 103298932 103298953 FZD6|NM_003506.4|non-overlapping|CTG 0 + 103298932 103298932 0,0,0  1 21, 0,
chr8 103298944 103298953 FZD6|NM_003506.4|non-overlapping|GTG 0 + 103298944 103298944 0,0,0  1 9, 0,
chr8 103298953 103299958 FZD6|NM_003506.4|non-overlapping|ACG 0 + 103298953 103298953 0,0,0  2 42,3, 0,1002,
chr8 103298959 103299958 FZD6|NM_003506.4|non-overlapping|ACG 0 + 103298959 103298959 0,0,0  2 36,3, 0,996,
chr8 103299992 103300013 FZD6|NM_003506.4|non-overlapping|ATG 0 + 103299992 103299992 0,0,0  1 21, 0,
chr8 103300009 103300102 FZD6|NM_003506.4|non-overlapping|ATG 0 + 103300009 103300009 0,0,0  1 93, 0,
chr8 103300037 103300052 FZD6|NM_003506.4|non-overlapping|ATG 0 + 103300037 103300037 0,0,0  1 15, 0,
chr8 103300054 103300102 FZD6|NM_003506.4|non-overlapping|ATG 0 + 103300054 103300054 0,0,0  1 48, 0,
chr8 103300079 103300088 FZD6|NM_003506.4|non-overlapping|ATG 0 + 103300079 103300079 0,0,0  1 9, 0,
chr8 124539139 124539187 NDUFB9|NM_005005.3|non-overlapping|GTG 0 + 124539139 124539139 0,0,0  1 48, 0,
chr8 125091925 125102122 NSMCE2|NM_173685.4|non-overlapping|GTG 0 + 125091925 125091925 0,0,0  2 33,72, 0,10125,
chr8 125091935 125102078 NSMCE2|NM_173685.4|non-overlapping|ACG 0 + 125091935 125091935 0,0,0  2 23,28, 0,10115,
chr8 125102092 125102122 NSMCE2|NM_173685.4|non-overlapping|CTG 0 + 125102092 125102092 0,0,0  1 30, 0,
chr8 144082665 144082686 GPAA1|NM_003801.4|non-overlapping|CTG 0 + 144082665 144082665 0,0,0  1 21, 0,
chr9   2621842   2639861 VLDLR|NM_003383.5|overlapping|CTG 0 +   2621842   2621842 0,0,0  3 429,120,3, 0,13610,18016,
chr9   2621927   2622014 VLDLR|NM_003383.5|non-overlapping|ATT 0 +   2621927   2621927 0,0,0  1 87, 0,
chr9   2622121   2639861 VLDLR|NM_003383.5|overlapping|CTG 0 +   2622121   2622121 0,0,0  3 150,120,3, 0,13331,17737,
chr9   2622134   2635471 VLDLR|NM_003383.5|overlapping|GTG 0 +   2622134   2622134 0,0,0  2 137,19, 0,13318,
chr9  26956443  26962028 IFT74|NM_025103.4|overlapping|CTG 0 +  26956443  26956443 0,0,0  2 73,80, 0,5505,
chr9  26956449  26962028 IFT74|NM_025103.4|overlapping|GTG 0 +  26956449  26956449 0,0,0  2 67,80, 0,5499,
chr9  26956491  26962028 IFT74|NM_025103.4|overlapping|CTG 0 +  26956491  26956491 0,0,0  2 25,80, 0,5457,
chr9  35546445  35546529 RUSC2|NM_001135999.1|overlapping|ATG 0 +  35546445  35546445 0,0,0  1 84, 0,
chr9  35546450  35546498 RUSC2|NM_001135999.1|non-overlapping|ATG 0 +  35546450  35546450 0,0,0  1 48, 0,
chr9  35546465  35546498 RUSC2|NM_001135999.1|non-overlapping|CTG 0 +  35546465  35546465 0,0,0  1 33, 0,
chr9  37422718  37422754 GRHPR|NM_012203.2|overlapping|CTG 0 +  37422718  37422718 0,0,0  1 36, 0,
chr9  77177691  77199975 VPS13A|NM_033305.3|overlapping|ACG 0 +  77177691  77177691 0,0,0  2 113,31, 0,22253,
chr9  78236102  78236177 CEP78|NM_001098802.3|non-overlapping|ATG 0 +  78236102  78236102 0,0,0  1 75, 0,
chr9  78236186  78236354 CEP78|NM_001098802.3|overlapping|CTG 0 +  78236186  78236186 0,0,0  1 168, 0,
chr9  95875767  95875857 ERCC6L2|NM_020207.7|non-overlapping|GTG 0 +  95875767  95875767 0,0,0  1 90, 0,
chr9  95875779  95875857 ERCC6L2|NM_020207.7|non-overlapping|TTG 0 +  95875779  95875779 0,0,0  1 78, 0,
chr9  95875802  95880940 ERCC6L2|NM_020207.7|overlapping|CTG 0 +  95875802  95875802 0,0,0  2 282,72, 0,5066,
chr9  95875874  95880940 ERCC6L2|NM_020207.7|overlapping|ATC 0 +  95875874  95875874 0,0,0  2 210,72, 0,4994,
chr9  95875890  95880914 ERCC6L2|NM_020207.7|overlapping|CTG 0 +  95875890  95875890 0,0,0  2 194,46, 0,4978,
chr9  95875916  95880940 ERCC6L2|NM_020207.7|overlapping|ATG 0 +  95875916  95875916 0,0,0  2 168,72, 0,4952,
chr9  97412171  97428521 TDRD7|NM_014290.3|overlapping|CTG 0 +  97412171  97412171 0,0,0  2 67,62, 0,16288,
chr9  97412180  97428521 TDRD7|NM_014290.3|overlapping|ACG 0 +  97412180  97412180 0,0,0  2 58,62, 0,16279,
chr9  98056774  98060795 NANS|NM_018946.4|overlapping|CTG 0 +  98056774  98056774 0,0,0  2 166,14, 0,4007,
chr9 100099392 100300674 INVS|NM_014425.5|CDS_extension|ACG 0 + 100099392 100099392 0,0,0 17 24,130,167,174,168,181,110,172,156,230,107,213,284,718,230,75,107, 0,5105,26990,126669,130267,140667,143177,147223,152890,153514,165429,173471,184927,192933,197524,198543,201175,
chr9 105558150 105573678 FKTN|NM_001079802.2|non-overlapping|CTG 0 + 105558150 105558150 0,0,0  2 15,24, 0,15504,
chr9 105573674 105573689 FKTN|NM_001079802.2|non-overlapping|ATG 0 + 105573674 105573674 0,0,0  1 15, 0,
chr9 105573698 105573716 FKTN|NM_001079802.2|non-overlapping|ATC 0 + 105573698 105573698 0,0,0  1 18, 0,
chr9 105574952 105575033 FKTN|NM_001079802.2|non-overlapping|ATT 0 + 105574952 105574952 0,0,0  1 81, 0,
chr9 105574979 105575033 FKTN|NM_001079802.2|non-overlapping|ATG 0 + 105574979 105574979 0,0,0  1 54, 0,
chr9 114155694 114155856 COL27A1|NM_032888.4|non-overlapping|GTG 0 + 114155694 114155694 0,0,0  1 162, 0,
chr9 116697683 116697719 TRIM32|NM_012210.4|non-overlapping|ATG 0 + 116697683 116697683 0,0,0  1 36, 0,
chr9 127452016 127454562 LRSAM1|NM_138361.5|overlapping|GTG 0 + 127452016 127452016 0,0,0  2 68,67, 0,2479,
chr9 128322626 128322656 COQ4|NM_016035.5|non-overlapping|ATG 0 + 128322626 128322626 0,0,0  1 30, 0,
chr9 128322700 128322745 COQ4|NM_016035.5|non-overlapping|ATG 0 + 128322700 128322700 0,0,0  1 45, 0,
chr9 128504788 128504839 GLE1|NM_001003722.2|overlapping|CTG 0 + 128504788 128504788 0,0,0  1 51, 0,
chr9 131503013 131523106 POMT1|NM_007171.4|CDS_extension|ACG 0 + 131503013 131503013 0,0,0 20 60,152,107,51,147,112,66,160,156,131,96,93,97,93,121,98,114,127,178,175, 0,1175,3100,3389,4354,5897,6729,6889,7246,8323,9027,10225,12412,15431,15823,16375,17066,18332,19033,19918,
chr9 131503049 131523106 POMT1|NM_007171.4|CDS_extension|CTG 0 + 131503049 131503049 0,0,0 20 24,152,107,51,147,112,66,160,156,131,96,93,97,93,121,98,114,127,178,175, 0,1139,3064,3353,4318,5861,6693,6853,7210,8287,8991,10189,12376,15395,15787,16339,17030,18296,18997,19882,
chr10  25935803  25952123 MYO3A|NM_017433.5|overlapping|ATG 0 +  25935803  25935803 0,0,0  2 27,30, 0,16290,
chr10  58385432  58386303 TFAM|NM_003201.3|overlapping|ATG 0 +  58385432  58385432 0,0,0  2 216,84, 0,787,
chr10  69802001  69802040 COL13A1|NM_001130103.2|non-overlapping|ATG 0 +  69802001  69802001 0,0,0  1 39, 0,
chr10  70816018  70816054 SGPL1|NM_003901.4|non-overlapping|CTG 0 +  70816018  70816018 0,0,0  1 36, 0,
chr10  70816050  70816122 SGPL1|NM_003901.4|non-overlapping|CTG 0 +  70816050  70816050 0,0,0  1 72, 0,
chr10  70816068  70816122 SGPL1|NM_003901.4|non-overlapping|GTG 0 +  70816068  70816068 0,0,0  1 54, 0,
chr10  70816107  70816122 SGPL1|NM_003901.4|non-overlapping|CTG 0 +  70816107  70816107 0,0,0  1 15, 0,
chr10  71964589  72005897 CHST3|NM_004273.5|overlapping|CTG 0 +  71964589  71964589 0,0,0  2 105,162, 0,41146,
chr10  71964597  72005782 CHST3|NM_004273.5|non-overlapping|ATC 0 +  71964597  71964597 0,0,0  2 97,47, 0,41138,
chr10  71964629  72005757 CHST3|NM_004273.5|non-overlapping|ATG 0 +  71964629  71964629 0,0,0  2 65,22, 0,41106,
chr10  74176796  74200802 ADK|NM_001123.4|overlapping|GTG 0 +  74176796  74176796 0,0,0  2 90,39, 0,23967,
chr10  74176846  74176876 ADK|NM_001123.4|overlapping|GTG 0 +  74176846  74176846 0,0,0  1 30, 0,
chr10  87659927  87745970 PAPSS2|NM_001015880.2|CDS_extension|CTG 0 +  87659927  87659927 0,0,0 13 81,118,236,139,119,114,112,15,206,136,269,230,139, 0,49268,53147,54116,54817,55057,55804,61828,67356,81307,83445,85074,85904,
chr10  87659943  87709223 PAPSS2|NM_001015880.2|overlapping|CTG 0 +  87659943  87659943 0,0,0  2 65,28, 0,49252,
chr10  95756189  95823248 ENTPD1|NM_001776.6|overlapping|CTG 0 +  95756189  95756189 0,0,0  2 66,12, 0,67047,
chr10 110008051 110008204 ADD3|NM_016824.5|non-overlapping|ATT 0 + 110008051 110008051 0,0,0  1 153, 0,
chr10 110008101 110100657 ADD3|NM_016824.5|overlapping|GTG 0 + 110008101 110008101 0,0,0  2 198,33, 0,92523,
chr10 110008117 110008204 ADD3|NM_016824.5|non-overlapping|CTG 0 + 110008117 110008117 0,0,0  1 87, 0,
chr10 110008183 110008204 ADD3|NM_016824.5|non-overlapping|CTG 0 + 110008183 110008183 0,0,0  1 21, 0,
chr10 110008191 110100657 ADD3|NM_016824.5|overlapping|CTG 0 + 110008191 110008191 0,0,0  2 108,33, 0,92433,
chr10 110008287 110100657 ADD3|NM_016824.5|overlapping|ACG 0 + 110008287 110008287 0,0,0  2 12,33, 0,92337,
chr10 113854715 113854724 NHLRC2|NM_198514.4|non-overlapping|ATG 0 + 113854715 113854715 0,0,0  1 9, 0,
chr10 113854775 113854805 NHLRC2|NM_198514.4|non-overlapping|ATG 0 + 113854775 113854775 0,0,0  1 30, 0,
chr10 113854801 113854936 NHLRC2|NM_198514.4|overlapping|GTG 0 + 113854801 113854801 0,0,0  1 135, 0,
chr11    709343    710422 EPS8L2|NM_022772.4|overlapping|CTG 0 +    709343    709343 0,0,0  3 108,56,1, 0,209,1078,
chr11   2377329   2390458 CD81|NM_004356.4|overlapping|ACG 0 +   2377329   2377329 0,0,0  2 286,47, 0,13082,
chr11   2377338   2390458 CD81|NM_004356.4|overlapping|ACG 0 +   2377338   2377338 0,0,0  2 277,47, 0,13073,
chr11   2377362   2390458 CD81|NM_004356.4|overlapping|CTG 0 +   2377362   2377362 0,0,0  2 253,47, 0,13049,
chr11   3855708   3856266 STIM1|NM_001277961.3|non-overlapping|CTG 0 +   3855708   3855708 0,0,0  1 558, 0,
chr11  18394601  18396855 LDHA|NM_005566.4|overlapping|ACG 0 +  18394601  18394601 0,0,0  2 35,37, 0,2217,
chr11  18394612  18407281 LDHA|NM_005566.4|CDS_extension|ACG 0 +  18394612  18394612 0,0,0  8 24,150,118,174,174,118,124,165, 0,2206,4818,6224,8227,9081,10836,12504,
chr11  36568042  36568063 RAG1|NM_000448.3|non-overlapping|TTG 0 +  36568042  36568042 0,0,0  1 21, 0,
chr11  36568077  36573410 RAG1|NM_000448.3|overlapping|ATT 0 +  36568077  36568077 0,0,0  2 45,120, 0,5213,
chr11  36568086  36573410 RAG1|NM_000448.3|overlapping|ATC 0 +  36568086  36568086 0,0,0  2 36,120, 0,5204,
chr11  45805208  45805604 SLC35C1|NM_018389.5|non-overlapping|GTG 0 +  45805208  45805208 0,0,0  1 396, 0,
chr11  45805263  45805365 SLC35C1|NM_018389.5|non-overlapping|CTG 0 +  45805263  45805263 0,0,0  1 102, 0,
chr11  45805314  45805365 SLC35C1|NM_018389.5|non-overlapping|CTG 0 +  45805314  45805314 0,0,0  1 51, 0,
chr11  45805361  45805604 SLC35C1|NM_018389.5|non-overlapping|ATG 0 +  45805361  45805361 0,0,0  1 243, 0,
chr11  45805654  45805735 SLC35C1|NM_018389.5|non-overlapping|ATG 0 +  45805654  45805654 0,0,0  1 81, 0,
chr11  45805663  45805735 SLC35C1|NM_018389.5|non-overlapping|ATG 0 +  45805663  45805663 0,0,0  1 72, 0,
chr11  46277683  46277896 CREB3L1|NM_052854.4|non-overlapping|GTG 0 +  46277683  46277683 0,0,0  1 213, 0,
chr11  46277817  46277868 CREB3L1|NM_052854.4|non-overlapping|ATG 0 +  46277817  46277817 0,0,0  1 51, 0,
chr11  47215091  47215106 DDB2|NM_000107.3|non-overlapping|ATG 0 +  47215091  47215091 0,0,0  1 15, 0,
chr11  47408621  47412352 SLC39A13|NM_152264.5|overlapping|ATG 0 +  47408621  47408621 0,0,0  4 41,330,114,7, 0,1444,3304,3724,
chr11  57597698  57598257 SERPING1|NM_000062.3|non-overlapping|CTG 0 +  57597698  57597698 0,0,0  2 24,9, 0,550,
chr11  57657798  57657807 CLP1|NM_006831.3|non-overlapping|TTG 0 +  57657798  57657798 0,0,0  1 9, 0,
chr11  60455923  60455929 MS4A1|NM_152866.3|non-overlapping|ATT 0 +  60455923  60455923 0,0,0  1 6, 0,
chr11  61362386  61362398 TMEM138|NM_016464.5|non-overlapping|ATG 0 +  61362386  61362386 0,0,0  1 12, 0,
chr11  61362394  61364264 TMEM138|NM_016464.5|non-overlapping|ATG 0 +  61362394  61362394 0,0,0  2 26,13, 0,1857,
chr11  61364312  61368709 TMEM138|NM_016464.5|CDS_extension|GTG 0 +  61364312  61364312 0,0,0  4 206,172,76,113, 0,1732,3610,4284,
chr11  61392465  61392531 TMEM216|NM_001173990.3|non-overlapping|CTG 0 +  61392465  61392465 0,0,0  1 66, 0,
chr11  63974630  63974651 COX8A|NM_004074.3|non-overlapping|CTG 0 +  63974630  63974630 0,0,0  1 21, 0,
chr11  64206716  64211094 FERMT3|NM_031471.6|overlapping|CTG 0 +  64206716  64206716 0,0,0  4 98,174,234,43, 0,634,3894,4335,
chr11  66002307  66002469 BANF1|NM_001143985.1|non-overlapping|CTG 0 +  66002307  66002307 0,0,0  1 162, 0,
chr11  66002441  66002456 BANF1|NM_001143985.1|non-overlapping|ATG 0 +  66002441  66002441 0,0,0  1 15, 0,
chr11  66002503  66002512 BANF1|NM_001143985.1|non-overlapping|GTG 0 +  66002503  66002503 0,0,0  1 9, 0,
chr11  66257782  66257824 KLC2|NM_022822.3|non-overlapping|ATG 0 +  66257782  66257782 0,0,0  1 42, 0,
chr11  66257808  66266956 KLC2|NM_022822.3|CDS_extension|GTG 0 +  66257808  66257808 0,0,0 16 63,276,231,70,223,88,102,174,100,50,68,109,159,125,58,84, 0,738,3933,4314,5005,5851,6042,6237,6536,7214,7359,7846,8045,8284,8624,9064,
chr11  67606963  67606981 NDUFV1|NM_007103.4|non-overlapping|ATG 0 +  67606963  67606963 0,0,0  1 18, 0,
chr11  68030693  68032971 NDUFS8|NM_002496.4|overlapping|CTG 0 +  68030693  68030693 0,0,0  4 40,58,51,49, 0,1458,1592,2229,
chr11  68030698  68032164 NDUFS8|NM_002496.4|overlapping|CTG 0 +  68030698  68030698 0,0,0  2 35,13, 0,1453,
chr11  68039033  68039054 TCIRG1|NM_006019.4|non-overlapping|CTG 0 +  68039033  68039033 0,0,0  1 21, 0,
chr11  70203332  70206151 FADD|NM_003824.4|overlapping|GTG 0 +  70203332  70203332 0,0,0  2 413,19, 0,2800,
chr11  70203346  70203520 FADD|NM_003824.4|overlapping|GTG 0 +  70203346  70203346 0,0,0  1 174, 0,
chr11  72080864  72088314 LRTOMT|NM_145309.6|non-overlapping|CTG 0 +  72080864  72080864 0,0,0  2 21,18, 0,7432,
chr11  72080864  72093504 LRTOMT|NM_001145308.5|non-overlapping|CTG 0 +  72080864  72080864 0,0,0  2 21,9, 0,12631,
chr11  72088341  72088353 LRTOMT|NM_145309.6|non-overlapping|ATG 0 +  72088341  72088341 0,0,0  1 12, 0,
chr11  72089071  72089080 LRTOMT|NM_145309.6|non-overlapping|ATG 0 +  72089071  72089071 0,0,0  1 9, 0,
chr11  72224863  72224923 INPPL1|NM_001567.4|non-overlapping|CTG 0 +  72224863  72224863 0,0,0  1 60, 0,
chr11  72224919  72224970 INPPL1|NM_001567.4|non-overlapping|CTG 0 +  72224919  72224919 0,0,0  1 51, 0,
chr11  75562146  75562254 SERPINH1|NM_001235.5|non-overlapping|CTG 0 +  75562146  75562146 0,0,0  1 108, 0,
chr11  75562289  75562304 SERPINH1|NM_001235.5|non-overlapping|ACG 0 +  75562289  75562289 0,0,0  1 15, 0,
chr11  85647991  85648009 TMEM126A|NM_032273.4|non-overlapping|ATG 0 +  85647991  85647991 0,0,0  1 18, 0,
chr11  85648026  85650269 TMEM126A|NM_032273.4|overlapping|GTG 0 +  85648026  85648026 0,0,0  2 63,21, 0,2222,
chr11  85648038  85650269 TMEM126A|NM_032273.4|overlapping|GTG 0 +  85648038  85648038 0,0,0  2 51,21, 0,2210,
chr11  86302251  86302380 HIKESHI|NM_016401.4|non-overlapping|GTG 0 +  86302251  86302251 0,0,0  1 129, 0,
chr11  86302307  86302370 HIKESHI|NM_016401.4|non-overlapping|CTG 0 +  86302307  86302307 0,0,0  1 63, 0,
chr11  86302321  86302327 HIKESHI|NM_016401.4|non-overlapping|ATG 0 +  86302321  86302321 0,0,0  1 6, 0,
chr11  86302355  86302370 HIKESHI|NM_016401.4|non-overlapping|CTG 0 +  86302355  86302355 0,0,0  1 15, 0,
chr11  86302420  86306279 HIKESHI|NM_016401.4|overlapping|CTG 0 +  86302420  86302420 0,0,0  2 58,35, 0,3824,
chr11  86302431  86306425 HIKESHI|NM_016401.4|overlapping|ACG 0 +  86302431  86302431 0,0,0  2 47,181, 0,3813,
chr11  93784364  93784400 MED17|NM_004268.5|non-overlapping|CTG 0 +  93784364  93784364 0,0,0  1 36, 0,
chr11  95790528  95790657 CEP57|NM_014679.5|non-overlapping|CTG 0 +  95790528  95790528 0,0,0  1 129, 0,
chr11  95790574  95790604 CEP57|NM_014679.5|non-overlapping|TTG 0 +  95790574  95790574 0,0,0  1 30, 0,
chr11  95790586  95790604 CEP57|NM_014679.5|non-overlapping|ATC 0 +  95790586  95790586 0,0,0  1 18, 0,
chr11  95790612  95790657 CEP57|NM_014679.5|non-overlapping|CTG 0 +  95790612  95790612 0,0,0  1 45, 0,
chr11  95790633  95790657 CEP57|NM_014679.5|non-overlapping|TTG 0 +  95790633  95790633 0,0,0  1 24, 0,
chr11  95790645  95790657 CEP57|NM_014679.5|non-overlapping|ACG 0 +  95790645  95790645 0,0,0  1 12, 0,
chr11 103109521 103109644 DYNC2H1|NM_001080463.2|overlapping|CTG 0 + 103109521 103109521 0,0,0  1 123, 0,
chr11 108121577 108131913 ACAT1|NM_000019.4|overlapping|GTG 0 + 108121577 108121577 0,0,0  2 101,7, 0,10329,
chr11 112025173 112025509 DLAT|NM_001931.5|overlapping|ATG 0 + 112025173 112025173 0,0,0  1 336, 0,
chr11 112226375 112226447 PTS|NM_000317.3|overlapping|GTG 0 + 112226375 112226375 0,0,0  1 72, 0,
chr11 118304907 118304934 CD3E|NM_000733.4|non-overlapping|CTG 0 + 118304907 118304907 0,0,0  1 27, 0,
chr11 118304941 118312650 CD3E|NM_000733.4|overlapping|ATG 0 + 118304941 118304941 0,0,0  5 60,21,15,18,33, 0,2346,3485,7211,7676,
chr11 118344362 118344422 CD3G|NM_000073.3|non-overlapping|CTG 0 + 118344362 118344362 0,0,0  1 60, 0,
chr11 118344374 118344422 CD3G|NM_000073.3|non-overlapping|CTG 0 + 118344374 118344374 0,0,0  1 48, 0,
chr11 118344395 118344422 CD3G|NM_000073.3|non-overlapping|ACG 0 + 118344395 118344395 0,0,0  1 27, 0,
chr11 121292698 121292767 SC5D|NM_006918.5|non-overlapping|ATG 0 + 121292698 121292698 0,0,0  1 69, 0,
chr11 121292783 121303452 SC5D|NM_006918.5|overlapping|GTG 0 + 121292783 121292783 0,0,0  2 33,87, 0,10582,
chr11 125592875 125592905 STT3A|NM_001278503.2|non-overlapping|ATG 0 + 125592875 125592875 0,0,0  1 30, 0,
chr11 125595907 125595919 STT3A|NM_001278503.2|overlapping|ATG 0 + 125595907 125595907 0,0,0  1 12, 0,
chr11 126269122 126269146 FOXRED1|NM_017547.4|non-overlapping|ATG 0 + 126269122 126269122 0,0,0  1 24, 0,
chr11 126269171 126269210 FOXRED1|NM_017547.4|overlapping|GTG 0 + 126269171 126269171 0,0,0  1 39, 0,
chr11 130159793 130159955 ST14|NM_021978.4|non-overlapping|CTG 0 + 130159793 130159793 0,0,0  1 162, 0,
chr11 130159864 130188584 ST14|NM_021978.4|overlapping|CTG 0 + 130159864 130159864 0,0,0  3 196,160,55, 0,28249,28665,
chr11 130159919 130159955 ST14|NM_021978.4|non-overlapping|ATG 0 + 130159919 130159919 0,0,0  1 36, 0,
chr12   6494116   6495091 NCAPD2|NM_014865.4|non-overlapping|CTG 0 +   6494116   6494116 0,0,0  2 38,16, 0,959,
chr12   6867514   6867541 TPI1|NM_000365.6|non-overlapping|GTG 0 +   6867514   6867514 0,0,0  1 27, 0,
chr12   6867537   6867612 TPI1|NM_000365.6|overlapping|CTG 0 +   6867537   6867537 0,0,0  1 75, 0,
chr12   6943854   6943935 C12orf57|NM_138425.4|non-overlapping|CTG 0 +   6943854   6943854 0,0,0  1 81, 0,
chr12   7189810   7189924 PEX5|NM_001131025.2|non-overlapping|GTG 0 +   7189810   7189810 0,0,0  1 114, 0,
chr12   7189933   7190432 PEX5|NM_001131025.2|overlapping|ATG 0 +   7189933   7189933 0,0,0  2 283,71, 0,428,
chr12  21437686  21437710 PYROXD1|NM_024854.5|non-overlapping|TTG 0 +  21437686  21437686 0,0,0  1 24, 0,
chr12  32679325  32679376 DNM1L|NM_012062.5|overlapping|GTG 0 +  32679325  32679325 0,0,0  1 51, 0,
chr12  45216088  45216205 ANO6|NM_001025356.3|non-overlapping|ATG 0 +  45216088  45216088 0,0,0  1 117, 0,
chr12  45216137  45216314 ANO6|NM_001025356.3|non-overlapping|CTG 0 +  45216137  45216137 0,0,0  1 177, 0,
chr12  45216181  45216205 ANO6|NM_001025356.3|non-overlapping|CTG 0 +  45216181  45216181 0,0,0  1 24, 0,
chr12  45216218  45216314 ANO6|NM_001025356.3|non-overlapping|ACG 0 +  45216218  45216218 0,0,0  1 96, 0,
chr12  45216263  45216314 ANO6|NM_001025356.3|non-overlapping|CTG 0 +  45216263  45216263 0,0,0  1 51, 0,
chr12  50103983  50104058 GPD1|NM_005276.4|overlapping|ATG 0 +  50103983  50103983 0,0,0  1 75, 0,
chr12  50112236  50120069 COX14|NM_032901.4|overlapping|GTG 0 +  50112236  50112236 0,0,0  2 65,34, 0,7799,
chr12  50112250  50112262 COX14|NM_032901.4|non-overlapping|CTG 0 +  50112250  50112250 0,0,0  1 12, 0,
chr12  50112254  50120069 COX14|NM_032901.4|overlapping|CTG 0 +  50112254  50112254 0,0,0  2 47,34, 0,7781,
chr12  50112277  50120065 COX14|NM_032901.4|overlapping|ATG 0 +  50112277  50112277 0,0,0  2 24,30, 0,7758,
chr12  52949147  52949177 KRT18|NM_000224.3|overlapping|CTG 0 +  52949147  52949147 0,0,0  1 30, 0,
chr12  53938901  53938910 HOXC13|NM_017410.3|overlapping|ATG 0 +  53938901  53938901 0,0,0  1 9, 0,
chr12  55997299  55997311 SUOX|NM_000456.3|non-overlapping|CTG 0 +  55997299  55997299 0,0,0  1 12, 0,
chr12  55997644  55997722 SUOX|NM_000456.3|non-overlapping|CTG 0 +  55997644  55997644 0,0,0  1 78, 0,
chr12  55997690  55997699 SUOX|NM_000456.3|non-overlapping|CTG 0 +  55997690  55997690 0,0,0  1 9, 0,
chr12  57128520  57128529 LRP1|NM_002332.3|non-overlapping|ATG 0 +  57128520  57128520 0,0,0  1 9, 0,
chr12  57128664  57128676 LRP1|NM_002332.3|non-overlapping|ATG 0 +  57128664  57128664 0,0,0  1 12, 0,
chr12  57128828  57138465 LRP1|NM_002332.3|overlapping|TTG 0 +  57128828  57128828 0,0,0  2 203,7, 0,9630,
chr12  63779872  63781040 RXYLT1|NM_014254.3|overlapping|CTG 0 +  63779872  63779872 0,0,0  2 257,22, 0,1146,
chr12  63779925  63779943 RXYLT1|NM_014254.3|non-overlapping|ATG 0 +  63779925  63779925 0,0,0  1 18, 0,
chr12  63779935  63781040 RXYLT1|NM_014254.3|overlapping|ATG 0 +  63779935  63779935 0,0,0  2 194,22, 0,1083,
chr12  68687011  68687020 NUP107|NM_020401.4|non-overlapping|ACG 0 +  68687011  68687011 0,0,0  1 9, 0,
chr12  68687025  68689551 NUP107|NM_020401.4|overlapping|CTG 0 +  68687025  68687025 0,0,0  3 48,92,19, 0,1936,2507,
chr12  88142403  88142460 TMTC3|NM_181783.4|non-overlapping|ATG 0 +  88142403  88142403 0,0,0  1 57, 0,
chr12  93677387  93677414 CRADD|NM_003805.5|non-overlapping|ATG 0 +  93677387  93677387 0,0,0  1 27, 0,
chr12 104456992 104457001 CHST11|NM_018413.6|non-overlapping|ATG 0 + 104456992 104456992 0,0,0  1 9, 0,
chr12 104457134 104757037 CHST11|NM_018413.6|overlapping|ATC 0 + 104457134 104457134 0,0,0  3 395,86,89, 0,144771,299814,
chr12 104457193 104457295 CHST11|NM_018413.6|non-overlapping|ACG 0 + 104457193 104457193 0,0,0  1 102, 0,
chr12 104457197 104757037 CHST11|NM_018413.6|overlapping|ATC 0 + 104457197 104457197 0,0,0  3 332,86,89, 0,144708,299751,
chr12 104457238 104457295 CHST11|NM_018413.6|non-overlapping|CTG 0 + 104457238 104457238 0,0,0  1 57, 0,
chr12 104457291 104757803 CHST11|NM_018413.6|CDS_extension|CTG 0 + 104457291 104457291 0,0,0  3 238,86,855, 0,144614,299657,
chr12 109477650 109477710 UBE3B|NM_130466.4|non-overlapping|ATG 0 + 109477650 109477650 0,0,0  1 60, 0,
chr12 109477659 109477710 UBE3B|NM_130466.4|non-overlapping|GTG 0 + 109477659 109477659 0,0,0  1 51, 0,
chr12 109477696 109477762 UBE3B|NM_130466.4|non-overlapping|GTG 0 + 109477696 109477696 0,0,0  1 66, 0,
chr12 109478001 109478103 UBE3B|NM_130466.4|non-overlapping|ATG 0 + 109478001 109478001 0,0,0  1 102, 0,
chr12 109481702 109483595 UBE3B|NM_130466.4|overlapping|ATG 0 + 109481702 109481702 0,0,0  2 40,65, 0,1828,
chr12 109573818 109596577 MVK|NM_000431.4|CDS_extension|CTG 0 + 109573818 109573818 0,0,0 11 55,92,148,145,156,104,46,91,117,154,152, 0,990,2179,5983,7576,12203,12935,16952,17422,21209,22607,
chr12 110124375 110124390 IFT81|NM_014055.4|non-overlapping|CTG 0 + 110124375 110124375 0,0,0  1 15, 0,
chr12 110124475 110124559 IFT81|NM_014055.4|non-overlapping|CTG 0 + 110124475 110124475 0,0,0  1 84, 0,
chr12 110124520 110124559 IFT81|NM_014055.4|non-overlapping|ATG 0 + 110124520 110124520 0,0,0  1 39, 0,
chr12 110124624 110124660 IFT81|NM_014055.4|non-overlapping|ATG 0 + 110124624 110124624 0,0,0  1 36, 0,
chr12 110614150 110614186 TCTN1|NM_001082538.3|overlapping|ATG 0 + 110614150 110614150 0,0,0  1 36, 0,
chr12 120438105 120440537 COX6A1|NM_004373.4|CDS_extension|CTG 0 + 120438105 120438105 0,0,0  3 124,143,84, 0,273,2348,
chr12 120725872 120727038 ACADS|NM_000017.4|overlapping|GTG 0 + 120725872 120725872 0,0,0  2 59,13, 0,1153,
chr12 123233458 123233482 C12orf65|NM_152269.5|non-overlapping|ATT 0 + 123233458 123233458 0,0,0  1 24, 0,
chr12 123233478 123233505 C12orf65|NM_152269.5|non-overlapping|GTG 0 + 123233478 123233478 0,0,0  1 27, 0,
chr12 123233509 123253678 C12orf65|NM_152269.5|overlapping|ACG 0 + 123233509 123233509 0,0,0  2 22,32, 0,20137,
chr12 123671137 123671179 TCTN2|NM_024809.5|non-overlapping|ATG 0 + 123671137 123671137 0,0,0  1 42, 0,
chr12 123671154 123671274 TCTN2|NM_024809.5|overlapping|GTG 0 + 123671154 123671154 0,0,0  1 120, 0,
chr12 123671161 123671179 TCTN2|NM_024809.5|non-overlapping|CTG 0 + 123671161 123671161 0,0,0  1 18, 0,
chr12 123671196 123671274 TCTN2|NM_024809.5|overlapping|ATG 0 + 123671196 123671196 0,0,0  1 78, 0,
chr12 123712370 123712496 ATP6V0A2|NM_012463.4|non-overlapping|GTG 0 + 123712370 123712370 0,0,0  1 126, 0,
chr12 123712397 123712496 ATP6V0A2|NM_012463.4|non-overlapping|GTG 0 + 123712397 123712397 0,0,0  1 99, 0,
chr12 123712439 123712496 ATP6V0A2|NM_012463.4|non-overlapping|GTG 0 + 123712439 123712439 0,0,0  1 57, 0,
chr12 131929292 131929409 PUS1|NM_025215.6|non-overlapping|ATG 0 + 131929292 131929292 0,0,0  1 117, 0,
chr12 131929410 131929437 PUS1|NM_025215.6|non-overlapping|CTG 0 + 131929410 131929410 0,0,0  1 27, 0,
chr12 131929524 131929641 PUS1|NM_025215.6|non-overlapping|CTG 0 + 131929524 131929524 0,0,0  1 117, 0,
chr12 131929614 131929641 PUS1|NM_025215.6|non-overlapping|CTG 0 + 131929614 131929614 0,0,0  1 27, 0,
chr13  28659117  28659144 POMP|NM_015932.6|non-overlapping|ACG 0 +  28659117  28659117 0,0,0  1 27, 0,
chr13  28659149  28662410 POMP|NM_015932.6|overlapping|ACG 0 +  28659149  28659149 0,0,0  2 38,1, 0,3260,
chr13  32315528  32315594 BRCA2|NM_000059.4|non-overlapping|CTG 0 +  32315528  32315528 0,0,0  1 66, 0,
chr13  32315606  32316498 BRCA2|NM_000059.4|overlapping|GTG 0 +  32315606  32315606 0,0,0  2 61,77, 0,815,
chr13  32315650  32316458 BRCA2|NM_000059.4|non-overlapping|CTG 0 +  32315650  32315650 0,0,0  2 17,37, 0,771,
chr13  36819268  36819277 RFXAP|NM_000538.4|non-overlapping|GTG 0 +  36819268  36819268 0,0,0  1 9, 0,
chr13  36819273  36819303 RFXAP|NM_000538.4|non-overlapping|CTG 0 +  36819273  36819273 0,0,0  1 30, 0,
chr13  36819293  36819353 RFXAP|NM_000538.4|non-overlapping|GTG 0 +  36819293  36819293 0,0,0  1 60, 0,
chr13  36819331  36819376 RFXAP|NM_000538.4|overlapping|GTG 0 +  36819331  36819331 0,0,0  1 45, 0,
chr13  38349897  38350016 UFM1|NM_001286704.2|non-overlapping|CTG 0 +  38349897  38349897 0,0,0  2 24,18, 0,101,
chr13  38687088  38687118 FREM2|NM_207361.6|non-overlapping|ATT 0 +  38687088  38687088 0,0,0  1 30, 0,
chr13  40789531  40789585 SLC25A15|NM_014252.4|non-overlapping|ATG 0 +  40789531  40789531 0,0,0  1 54, 0,
chr13  50909777  50909795 RNASEH2B|NM_024570.4|non-overlapping|ATG 0 +  50909777  50909777 0,0,0  1 18, 0,
chr13  50909905  50910031 RNASEH2B|NM_024570.4|non-overlapping|CTG 0 +  50909905  50909905 0,0,0  1 126, 0,
chr13  72782191  72782233 PIBF1|NM_006346.4|non-overlapping|ATG 0 +  72782191  72782191 0,0,0  1 42, 0,
chr13  72782302  72782335 PIBF1|NM_006346.4|non-overlapping|CTG 0 +  72782302  72782302 0,0,0  1 33, 0,
chr13  72782326  72782335 PIBF1|NM_006346.4|non-overlapping|GTG 0 +  72782326  72782326 0,0,0  1 9, 0,
chr13 102845902 102846058 ERCC5|NM_000123.4|non-overlapping|CTG 0 + 102845902 102845902 0,0,0  1 156, 0,
chr13 102846044 102846104 ERCC5|NM_000123.4|non-overlapping|GTG 0 + 102846044 102846044 0,0,0  1 60, 0,
chr13 102846059 102846104 ERCC5|NM_000123.4|non-overlapping|ACG 0 + 102846059 102846059 0,0,0  1 45, 0,
chr13 102846061 102846193 ERCC5|NM_000123.4|non-overlapping|GTG 0 + 102846061 102846061 0,0,0  1 132, 0,
chr13 102846089 102846104 ERCC5|NM_000123.4|non-overlapping|ATG 0 + 102846089 102846089 0,0,0  1 15, 0,
chr13 102846126 102846162 ERCC5|NM_000123.4|non-overlapping|GTG 0 + 102846126 102846126 0,0,0  1 36, 0,
chr13 102846199 102846229 ERCC5|NM_000123.4|non-overlapping|GTG 0 + 102846199 102846199 0,0,0  1 30, 0,
chr13 110615545 110622221 NAXD|NM_001242882.2|overlapping|ATG 0 + 110615545 110615545 0,0,0  2 102,6, 0,6670,
chr14  20469431  20469449 PNP|NM_000270.4|non-overlapping|TTG 0 +  20469431  20469431 0,0,0  1 18, 0,
chr14  20469445  20472319 PNP|NM_000270.4|overlapping|ATA 0 +  20469445  20469445 0,0,0  2 90,12, 0,2862,
chr14  20469477  20472384 PNP|NM_000270.4|overlapping|ATC 0 +  20469477  20469477 0,0,0  2 58,77, 0,2830,
chr14  20469501  20472384 PNP|NM_000270.4|overlapping|ATC 0 +  20469501  20469501 0,0,0  2 34,77, 0,2806,
chr14  20469514  20472319 PNP|NM_000270.4|overlapping|CTG 0 +  20469514  20469514 0,0,0  2 21,12, 0,2793,
chr14  24094349  24096911 PCK2|NM_004563.4|overlapping|ATA 0 +  24094349  24094349 0,0,0  2 85,20, 0,2542,
chr14  24094374  24096897 PCK2|NM_004563.4|overlapping|CTG 0 +  24094374  24094374 0,0,0  2 60,6, 0,2517,
chr14  45135954  45136032 FANCM|NM_020937.4|non-overlapping|ATG 0 +  45135954  45135954 0,0,0  1 78, 0,
chr14  49620858  49620870 MGAT2|NM_002408.4|non-overlapping|CTG 0 +  49620858  49620858 0,0,0  1 12, 0,
chr14  49620883  49620925 MGAT2|NM_002408.4|non-overlapping|ATG 0 +  49620883  49620883 0,0,0  1 42, 0,
chr14  49620983  49621022 MGAT2|NM_002408.4|non-overlapping|ATG 0 +  49620983  49620983 0,0,0  1 39, 0,
chr14  49621061  49621094 MGAT2|NM_002408.4|non-overlapping|ATG 0 +  49621061  49621061 0,0,0  1 33, 0,
chr14  60509277  60509454 SIX6|NM_007374.3|overlapping|GTG 0 +  60509277  60509277 0,0,0  1 177, 0,
chr14  60509285  60509420 SIX6|NM_007374.3|overlapping|CTG 0 +  60509285  60509285 0,0,0  1 135, 0,
chr14  64388340  64458303 MTHFD1|NM_005956.4|CDS_extension|GTG 0 +  64388340  64388340 0,0,0 27 128,85,60,54,137,101,137,112,128,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,90, 0,12452,22749,24131,27017,27298,29547,31473,36463,37389,37678,38996,41843,43191,43446,47228,50755,51785,53044,53713,53922,56352,59876,61104,65413,66382,69873,
chr14  64388374  64388419 MTHFD1|NM_005956.4|non-overlapping|GTG 0 +  64388374  64388374 0,0,0  1 45, 0,
chr14  66508161  66508311 GPHN|NM_020806.5|non-overlapping|CTG 0 +  66508161  66508161 0,0,0  1 150, 0,
chr14  66508177  66508513 GPHN|NM_020806.5|non-overlapping|TTG 0 +  66508177  66508177 0,0,0  1 336, 0,
chr14  66508224  66508311 GPHN|NM_020806.5|non-overlapping|CTG 0 +  66508224  66508224 0,0,0  1 87, 0,
chr14  66508372  66508513 GPHN|NM_020806.5|non-overlapping|GTG 0 +  66508372  66508372 0,0,0  1 141, 0,
chr14  66508419  66508431 GPHN|NM_020806.5|non-overlapping|CTG 0 +  66508419  66508419 0,0,0  1 12, 0,
chr14  75002949  75002973 EIF2B2|NM_014239.4|non-overlapping|GTG 0 +  75002949  75002949 0,0,0  1 24, 0,
chr14  75126823  75126949 NEK9|NM_033116.6|overlapping|CTG 0 -  75126823  75126823 0,0,0  1 126, 0,
chr14  75578638  75578830 FLVCR2|NM_017791.3|non-overlapping|GTG 0 +  75578638  75578638 0,0,0  1 192, 0,
chr14  75578682  75578850 FLVCR2|NM_017791.3|non-overlapping|GTG 0 +  75578682  75578682 0,0,0  1 168, 0,
chr14  75578760  75578850 FLVCR2|NM_017791.3|non-overlapping|GTG 0 +  75578760  75578760 0,0,0  1 90, 0,
chr14  75578862  75578871 FLVCR2|NM_017791.3|non-overlapping|CTG 0 +  75578862  75578862 0,0,0  1 9, 0,
chr14  75578923  75578983 FLVCR2|NM_017791.3|overlapping|CTG 0 +  75578923  75578923 0,0,0  1 60, 0,
chr14  75661311  75663080 TTLL5|NM_015072.5|non-overlapping|CTG 0 +  75661311  75661311 0,0,0  2 76,26, 0,1743,
chr14  75661370  75661382 TTLL5|NM_015072.5|non-overlapping|ATG 0 +  75661370  75661370 0,0,0  1 12, 0,
chr14  75663130  75663205 TTLL5|NM_015072.5|overlapping|ATG 0 +  75663130  75663130 0,0,0  1 75, 0,
chr14  77321070  77326849 GSTZ1|NM_145870.3|overlapping|ACG 0 +  77321070  77321070 0,0,0  3 113,52,12, 0,3799,5767,
chr14  77321076  77326849 GSTZ1|NM_145870.3|overlapping|CTG 0 +  77321076  77321076 0,0,0  3 107,52,12, 0,3793,5761,
chr14  77321094  77326849 GSTZ1|NM_145870.3|overlapping|CTG 0 +  77321094  77321094 0,0,0  3 89,52,12, 0,3775,5743,
chr14  77321113  77327479 GSTZ1|NM_145870.3|overlapping|AGG 0 +  77321113  77321113 0,0,0  4 70,52,68,8, 0,3756,5724,6358,
chr14  77321139  77326849 GSTZ1|NM_145870.3|overlapping|CTG 0 +  77321139  77321139 0,0,0  3 44,52,12, 0,3730,5698,
chr14  88385681  88385816 SPATA7|NM_018418.5|non-overlapping|CTG 0 +  88385681  88385681 0,0,0  1 135, 0,
chr14  88385748  88391429 SPATA7|NM_018418.5|overlapping|CTG 0 +  88385748  88385748 0,0,0  2 89,49, 0,5632,
chr14  88385786  88385816 SPATA7|NM_018418.5|non-overlapping|GTG 0 +  88385786  88385786 0,0,0  1 30, 0,
chr14  88563108  88563661 ZC3H14|NM_024824.5|overlapping|CTG 0 +  88563108  88563108 0,0,0  2 61,11, 0,542,
chr14  89955951  89956630 TDP1|NM_018319.4|non-overlapping|TTG 0 +  89955951  89955951 0,0,0  2 19,53, 0,626,
chr14  89956579  89956630 TDP1|NM_018319.4|non-overlapping|TTG 0 +  89956579  89956579 0,0,0  1 51, 0,
chr14  89956592  89956601 TDP1|NM_018319.4|non-overlapping|CTG 0 +  89956592  89956592 0,0,0  1 9, 0,
chr14  99793415  99793424 EML1|NM_004434.3|non-overlapping|GTG 0 +  99793415  99793415 0,0,0  1 9, 0,
chr14 102362994 102376677 TECPR2|NM_014844.5|non-overlapping|CTG 0 + 102362994 102362994 0,0,0  2 122,28, 0,13655,
chr14 102376666 102376939 TECPR2|NM_014844.5|overlapping|ATG 0 + 102376666 102376666 0,0,0  1 273, 0,
chr14 103385477 103385498 MARK3|NM_001128918.3|non-overlapping|CTG 0 + 103385477 103385477 0,0,0  1 21, 0,
chr14 103385545 103385662 MARK3|NM_001128918.3|non-overlapping|ATG 0 + 103385545 103385545 0,0,0  1 117, 0,
chr14 103385725 103385887 MARK3|NM_001128918.3|non-overlapping|CTG 0 + 103385725 103385725 0,0,0  1 162, 0,
chr14 103385788 103385887 MARK3|NM_001128918.3|non-overlapping|CTG 0 + 103385788 103385788 0,0,0  1 99, 0,
chr14 104724205 104724370 ADSSL1|NM_152328.5|overlapping|ATG 0 + 104724205 104724205 0,0,0  1 165, 0,
chr15  30903982  30904542 FAN1|NM_014967.5|non-overlapping|GTG 0 +  30903982  30903982 0,0,0  2 29,31, 0,529,
chr15  30904538  30904658 FAN1|NM_014967.5|non-overlapping|ATG 0 +  30904538  30904538 0,0,0  1 120, 0,
chr15  40471085  40471208 CHST14|NM_130468.4|non-overlapping|CTG 0 +  40471085  40471085 0,0,0  1 123, 0,
chr15  40594309  40594324 KNL1|NM_170589.5|non-overlapping|CTG 0 +  40594309  40594309 0,0,0  1 15, 0,
chr15  40594356  40605120 KNL1|NM_170589.5|overlapping|CTG 0 +  40594356  40594356 0,0,0  3 36,52,11, 0,8558,10753,
chr15  40594365  40605120 KNL1|NM_170589.5|overlapping|ATT 0 +  40594365  40594365 0,0,0  3 27,52,11, 0,8549,10744,
chr15  41774563  41775224 MAPKBP1|NM_001128608.2|non-overlapping|ATG 0 +  41774563  41774563 0,0,0  2 47,58, 0,603,
chr15  43371146  43371227 TUBGCP4|NM_014444.5|non-overlapping|CTG 0 +  43371146  43371146 0,0,0  1 81, 0,
chr15  43371209  43371227 TUBGCP4|NM_014444.5|non-overlapping|ATT 0 +  43371209  43371209 0,0,0  1 18, 0,
chr15  45587388  45592144 BLOC1S6|NM_012388.4|overlapping|TTG 0 +  45587388  45587388 0,0,0  2 137,10, 0,4746,
chr15  45587433  45592144 BLOC1S6|NM_012388.4|overlapping|CTG 0 +  45587433  45587433 0,0,0  2 92,10, 0,4701,
chr15  64387844  64393963 TRIP4|NM_016213.5|overlapping|CTG 0 +  64387844  64387844 0,0,0  2 120,18, 0,6101,
chr15  89247637  89247730 FANCI|NM_001113378.2|overlapping|ATG 0 +  89247637  89247637 0,0,0  1 93, 0,
chr15 100879843 100879876 ALDH1A3|NM_000693.4|non-overlapping|GTG 0 + 100879843 100879843 0,0,0  1 33, 0,
chr16   1493400   1494403 TELO2|NM_016111.4|overlapping|CTG 0 +   1493400   1493400 0,0,0  2 205,158, 0,845,
chr16   1493473   1494260 TELO2|NM_016111.4|non-overlapping|GTG 0 +   1493473   1493473 0,0,0  2 132,15, 0,772,
chr16   1493501   1493573 TELO2|NM_016111.4|non-overlapping|ATC 0 +   1493501   1493501 0,0,0  1 72, 0,
chr16   1493530   1494260 TELO2|NM_016111.4|non-overlapping|GTG 0 +   1493530   1493530 0,0,0  2 75,15, 0,715,
chr16   1493555   1493573 TELO2|NM_016111.4|non-overlapping|GTG 0 +   1493555   1493555 0,0,0  1 18, 0,
chr16   1493578   1494260 TELO2|NM_016111.4|non-overlapping|CTG 0 +   1493578   1493578 0,0,0  2 27,15, 0,667,
chr16   3024104   3024155 THOC6|NM_024339.5|non-overlapping|GTG 0 +   3024104   3024104 0,0,0  1 51, 0,
chr16   3024154   3024238 THOC6|NM_024339.5|non-overlapping|ATG 0 +   3024154   3024154 0,0,0  1 84, 0,
chr16  10877205  10877271 CIITA|NM_000246.4|non-overlapping|ATG 0 +  10877205  10877205 0,0,0  1 66, 0,
chr16  19067639  19073964 COQ7|NM_016138.5|overlapping|GTG 0 +  19067639  19067639 0,0,0  3 98,179,44, 0,4288,6281,
chr16  28985206  28985230 LAT|NM_001014987.2|non-overlapping|CTG 0 +  28985206  28985206 0,0,0  1 24, 0,
chr16  30065832  30065862 ALDOA|NM_184041.5|non-overlapping|CTG 0 +  30065832  30065832 0,0,0  1 30, 0,
chr16  30065835  30065862 ALDOA|NM_184041.5|non-overlapping|GTG 0 +  30065835  30065835 0,0,0  1 27, 0,
chr16  30748465  30748849 PHKG2|NM_000294.3|overlapping|CTG 0 +  30748465  30748465 0,0,0  2 25,47, 0,337,
chr16  30985237  30985288 HSD3B7|NM_025193.4|non-overlapping|CTG 0 +  30985237  30985237 0,0,0  1 51, 0,
chr16  30985279  30985288 HSD3B7|NM_025193.4|non-overlapping|CTG 0 +  30985279  30985279 0,0,0  1 9, 0,
chr16  46884383  46884434 GPT2|NM_133443.4|non-overlapping|ATG 0 +  46884383  46884383 0,0,0  1 51, 0,
chr16  46884438  46928997 GPT2|NM_133443.4|CDS_extension|GTG 0 +  46884438  46884438 0,0,0 12 29,265,90,109,134,244,80,137,175,156,113,91, 0,255,13209,16243,22403,25245,32189,34182,37803,39950,42486,44468,
chr16  54930909  54931302 IRX5|NM_005853.6|overlapping|GTG 0 +  54930909  54930909 0,0,0  1 393, 0,
chr16  54930976  54933873 IRX5|NM_005853.6|CDS_extension|CTG 0 +  54930976  54930976 0,0,0  3 471,406,797, 0,1521,2100,
chr16  55479240  55479252 MMP2|NM_004530.6|non-overlapping|CTG 0 +  55479240  55479240 0,0,0  1 12, 0,
chr16  55479264  55479327 MMP2|NM_004530.6|non-overlapping|ATT 0 +  55479264  55479264 0,0,0  1 63, 0,
chr16  55479275  55479335 MMP2|NM_004530.6|non-overlapping|CTG 0 +  55479275  55479275 0,0,0  1 60, 0,
chr16  55479323  55479335 MMP2|NM_004530.6|non-overlapping|ATG 0 +  55479323  55479323 0,0,0  1 12, 0,
chr16  55479427  55483018 MMP2|NM_004530.6|overlapping|ACG 0 +  55479427  55479427 0,0,0  2 205,110, 0,3481,
chr16  56730182  56748258 NUP93|NM_014669.5|overlapping|CTG 0 +  56730182  56730182 0,0,0  2 29,25, 0,18051,
chr16  56730195  56844609 NUP93|NM_014669.5|CDS_extension|ACG 0 +  56730195  56730195 0,0,0 22 16,193,118,63,129,75,90,140,133,158,166,94,192,127,73,45,117,119,118,84,129,111, 0,18038,28342,68280,75308,88468,91308,93511,98781,100332,101646,102099,103019,103932,104174,104538,106405,107412,108756,109325,111509,114303,
chr16  57245318  57246094 ARL2BP|NM_012106.4|overlapping|ATG 0 +  57245318  57245318 0,0,0  2 87,15, 0,761,
chr16  57736994  57737009 KATNB1|NM_005886.3|non-overlapping|ATG 0 +  57736994  57736994 0,0,0  1 15, 0,
chr16  58001473  58001533 USB1|NM_024598.4|overlapping|ATG 0 +  58001473  58001473 0,0,0  1 60, 0,
chr16  72093886  72093907 DHX38|NM_014003.4|non-overlapping|ATG 0 +  72093886  72093886 0,0,0  1 21, 0,
chr16  72093937  72093973 DHX38|NM_014003.4|non-overlapping|ATG 0 +  72093937  72093937 0,0,0  1 36, 0,
chr16  89918887  89918992 MC1R|NM_002386.4|non-overlapping|CTG 0 +  89918887  89918887 0,0,0  1 105, 0,
chr17   3636776   3637243 CTNS|NM_004937.3|non-overlapping|CTG 0 +   3636776   3636776 0,0,0  2 55,137, 0,330,
chr17   3636788   3637243 CTNS|NM_004937.3|non-overlapping|ATG 0 +   3636788   3636788 0,0,0  2 43,137, 0,318,
chr17   3637220   3637262 CTNS|NM_004937.3|non-overlapping|CTG 0 +   3637220   3637220 0,0,0  1 42, 0,
chr17   4998075   5000293 KIF1C|NM_006612.6|overlapping|ATC 0 +   4998075   4998075 0,0,0  3 81,121,74, 0,1774,2144,
chr17   4998095   5000223 KIF1C|NM_006612.6|non-overlapping|ACG 0 +   4998095   4998095 0,0,0  3 61,121,4, 0,1754,2124,
chr17   4998111   5000293 KIF1C|NM_006612.6|overlapping|TTG 0 +   4998111   4998111 0,0,0  3 45,121,74, 0,1738,2108,
chr17   4998129   5000293 KIF1C|NM_006612.6|overlapping|CTG 0 +   4998129   4998129 0,0,0  3 27,121,74, 0,1720,2090,
chr17   4999896   5000223 KIF1C|NM_006612.6|non-overlapping|ATG 0 +   4999896   4999896 0,0,0  2 74,4, 0,323,
chr17   7219941   7220498 ACADVL|NM_000018.4|overlapping|CTG 0 +   7219941   7219941 0,0,0  3 105,76,35, 0,180,522,
chr17   7688396   7688453 WRAP53|NM_018081.2|non-overlapping|ATG 0 +   7688396   7688396 0,0,0  1 57, 0,
chr17   7688492   7688594 WRAP53|NM_018081.2|non-overlapping|TTG 0 +   7688492   7688492 0,0,0  1 102, 0,
chr17   7688610   7688652 WRAP53|NM_018081.2|overlapping|CTG 0 +   7688610   7688610 0,0,0  1 42, 0,
chr17  14069533  14069557 COX10|NM_001303.4|non-overlapping|ATG 0 +  14069533  14069533 0,0,0  1 24, 0,
chr17  19648822  19648834 ALDH3A2|NM_000382.3|non-overlapping|CTG 0 +  19648822  19648822 0,0,0  1 12, 0,
chr17  19648909  19649098 ALDH3A2|NM_000382.3|overlapping|ATG 0 +  19648909  19648909 0,0,0  1 189, 0,
chr17  36535059  36535086 PIGW|NM_178517.5|non-overlapping|ATG 0 +  36535059  36535059 0,0,0  1 27, 0,
chr17  36535294  36535390 PIGW|NM_178517.5|non-overlapping|ATG 0 +  36535294  36535294 0,0,0  1 96, 0,
chr17  40287946  40287973 CDC6|NM_001254.4|non-overlapping|GTG 0 +  40287946  40287946 0,0,0  1 27, 0,
chr17  40288003  40288045 CDC6|NM_001254.4|non-overlapping|GTG 0 +  40288003  40288003 0,0,0  1 42, 0,
chr17  40288032  40288089 CDC6|NM_001254.4|non-overlapping|CTG 0 +  40288032  40288032 0,0,0  1 57, 0,
chr17  41930662  41930815 TTC25|NM_031421.5|overlapping|ATA 0 +  41930662  41930662 0,0,0  1 153, 0,
chr17  42562185  42562212 COASY|NM_025233.7|non-overlapping|GTG 0 +  42562185  42562185 0,0,0  1 27, 0,
chr17  42562194  42562212 COASY|NM_025233.7|non-overlapping|GTG 0 +  42562194  42562194 0,0,0  1 18, 0,
chr17  42562236  42562260 COASY|NM_025233.7|non-overlapping|GTG 0 +  42562236  42562236 0,0,0  1 24, 0,
chr17  42562286  42562415 COASY|NM_025233.7|non-overlapping|CTG 0 +  42562286  42562286 0,0,0  1 129, 0,
chr17  42562411  42562498 COASY|NM_025233.7|non-overlapping|ATG 0 +  42562411  42562411 0,0,0  1 87, 0,
chr17  42682753  42682783 CNTNAP1|NM_003632.3|non-overlapping|TTG 0 +  42682753  42682753 0,0,0  1 30, 0,
chr17  44004628  44004679 NAGS|NM_153006.3|overlapping|CTG 0 +  44004628  44004628 0,0,0  1 51, 0,
chr17  44070896  44076043 G6PC3|NM_138387.4|CDS_extension|CTG 0 +  44070896  44070896 0,0,0  6 287,107,91,119,142,364, 0,3263,3783,4072,4413,4783,
chr17  44070927  44070996 G6PC3|NM_138387.4|overlapping|CTG 0 +  44070927  44070927 0,0,0  1 69, 0,
chr17  44899766  44899847 CCDC103|NM_213607.3|non-overlapping|CTG 0 +  44899766  44899766 0,0,0  1 81, 0,
chr17  44899823  44899847 CCDC103|NM_213607.3|non-overlapping|GTG 0 +  44899823  44899823 0,0,0  1 24, 0,
chr17  45894672  45962324 MAPT|NM_005910.6|non-overlapping|CTG 0 +  45894672  45894672 0,0,0  2 14,4, 0,67648,
chr17  50056129  50056372 ITGA3|NM_002204.4|non-overlapping|ATC 0 +  50056129  50056129 0,0,0  1 243, 0,
chr17  50056172  50056277 ITGA3|NM_002204.4|non-overlapping|CTG 0 +  50056172  50056172 0,0,0  1 105, 0,
chr17  50056273  50056372 ITGA3|NM_002204.4|non-overlapping|GTG 0 +  50056273  50056273 0,0,0  1 99, 0,
chr17  50056279  50056372 ITGA3|NM_002204.4|non-overlapping|CTG 0 +  50056279  50056279 0,0,0  1 93, 0,
chr17  50056402  50064175 ITGA3|NM_002204.4|overlapping|ACG 0 +  50056402  50056402 0,0,0  2 243,99, 0,7674,
chr17  56834180  56834862 DGKE|NM_003647.3|overlapping|CTG 0 +  56834180  56834180 0,0,0  2 80,85, 0,597,
chr17  56834205  56834917 DGKE|NM_003647.3|overlapping|CTG 0 +  56834205  56834205 0,0,0  2 55,140, 0,572,
chr17  63600926  63600938 TACO1|NM_016360.4|non-overlapping|ATT 0 +  63600926  63600926 0,0,0  1 12, 0,
chr17  63600973  63601057 TACO1|NM_016360.4|non-overlapping|GTG 0 +  63600973  63600973 0,0,0  1 84, 0,
chr17  63601005  63601065 TACO1|NM_016360.4|non-overlapping|CTG 0 +  63601005  63601005 0,0,0  1 60, 0,
chr17  63601020  63601065 TACO1|NM_016360.4|non-overlapping|GTG 0 +  63601020  63601020 0,0,0  1 45, 0,
chr17  68306958  68307000 ARSG|NM_014960.5|non-overlapping|ATG 0 +  68306958  68306958 0,0,0  1 42, 0,
chr17  68307061  68307091 ARSG|NM_014960.5|non-overlapping|ATG 0 +  68307061  68307061 0,0,0  1 30, 0,
chr17  68307245  68307329 ARSG|NM_014960.5|non-overlapping|ATG 0 +  68307245  68307245 0,0,0  1 84, 0,
chr17  75261740  75261779 MRPS7|NM_015971.4|non-overlapping|TTG 0 +  75261740  75261740 0,0,0  1 39, 0,
chr17  75261790  75261820 MRPS7|NM_015971.4|non-overlapping|GTG 0 +  75261790  75261790 0,0,0  1 30, 0,
chr17  75456659  75456695 TMEM94|NM_014738.6|non-overlapping|ATG 0 +  75456659  75456659 0,0,0  1 36, 0,
chr17  76726871  76726883 METTL23|NM_001080510.5|non-overlapping|CTG 0 +  76726871  76726871 0,0,0  1 12, 0,
chr17  76726895  76733102 METTL23|NM_001080510.5|overlapping|TTG 0 +  76726895  76726895 0,0,0  3 283,105,125, 0,2794,6082,
chr17  76726933  76729792 METTL23|NM_001080510.5|overlapping|ATC 0 +  76726933  76726933 0,0,0  2 245,103, 0,2756,
chr17  76726943  76733102 METTL23|NM_001080510.5|overlapping|CTG 0 +  76726943  76726943 0,0,0  3 235,105,125, 0,2746,6034,
chr17  76726969  76729792 METTL23|NM_001080510.5|overlapping|GTG 0 +  76726969  76726969 0,0,0  2 209,103, 0,2720,
chr17  76729705  76729792 METTL23|NM_001080510.5|overlapping|ATG 0 +  76729705  76729705 0,0,0  1 87, 0,
chr17  80101874  80104562 GAA|NM_001079803.3|non-overlapping|CTG 0 +  80101874  80101874 0,0,0  2 16,8, 0,2680,
chr17  82752121  82752139 TBCD|NM_005993.5|non-overlapping|CTG 0 +  82752121  82752121 0,0,0  1 18, 0,
chr17  82752143  82752164 TBCD|NM_005993.5|non-overlapping|GTG 0 +  82752143  82752143 0,0,0  1 21, 0,
chr18   9102731   9134279 NDUFV2|NM_021074.5|CDS_extension|GTG 0 +   9102731   9102731 0,0,0  8 66,66,63,117,169,110,77,94, 0,15106,16594,16742,19781,22142,24099,31454,
chr18  22933410  22933458 RBBP8|NM_002894.3|non-overlapping|CTG 0 +  22933410  22933410 0,0,0  1 48, 0,
chr18  22933438  22936792 RBBP8|NM_002894.3|non-overlapping|AGG 0 +  22933438  22933438 0,0,0  2 126,39, 0,3315,
chr18  22933443  22933458 RBBP8|NM_002894.3|non-overlapping|TTG 0 +  22933443  22933443 0,0,0  1 15, 0,
chr18  22933511  22936781 RBBP8|NM_002894.3|non-overlapping|GTG 0 +  22933511  22933511 0,0,0  2 53,28, 0,3242,
chr18  22936772  22936781 RBBP8|NM_002894.3|non-overlapping|ACG 0 +  22936772  22936772 0,0,0  1 9, 0,
chr18  22936791  22936797 RBBP8|NM_002894.3|non-overlapping|ATG 0 +  22936791  22936791 0,0,0  1 6, 0,
chr18  36187522  36187531 MOCOS|NM_017947.4|non-overlapping|ATG 0 +  36187522  36187522 0,0,0  1 9, 0,
chr18  58671512  58681177 MALT1|NM_006785.4|overlapping|GTG 0 +  58671512  58671512 0,0,0  2 340,8, 0,9657,
chr18  58671543  58671597 MALT1|NM_006785.4|non-overlapping|CTG 0 +  58671543  58671543 0,0,0  1 54, 0,
chr18  58671573  58671597 MALT1|NM_006785.4|non-overlapping|GTG 0 +  58671573  58671573 0,0,0  1 24, 0,
chr18  58671596  58681177 MALT1|NM_006785.4|overlapping|ACG 0 +  58671596  58671596 0,0,0  2 256,8, 0,9573,
chr18  79679844  79679886 CTDP1|NM_004715.5|non-overlapping|AGG 0 +  79679844  79679844 0,0,0  1 42, 0,
chr18  79679864  79679900 CTDP1|NM_004715.5|non-overlapping|CTG 0 +  79679864  79679864 0,0,0  1 36, 0,
chr19   1241810   1244367 ATP5F1D|NM_001687.5|overlapping|CTG 0 +   1241810   1241810 0,0,0  4 181,154,89,53, 0,645,2286,2504,
chr19   1905403   1911916 ADAT3|NM_138422.4|non-overlapping|TTG 0 +   1905403   1905403 0,0,0  2 36,27, 0,6486,
chr19   1905414   1911906 ADAT3|NM_138422.4|non-overlapping|CTG 0 +   1905414   1905414 0,0,0  2 25,17, 0,6475,
chr19   1911902   1912160 ADAT3|NM_138422.4|overlapping|ATG 0 +   1911902   1911902 0,0,0  1 258, 0,
chr19   2977583   2995004 TLE6|NM_001143986.2|CDS_extension|TTG 0 +   2977583   2977583 0,0,0 17 27,87,83,46,42,63,256,17,67,77,38,253,251,142,151,77,105, 0,614,2516,3954,4564,9245,9399,9772,10140,10314,10507,11477,11951,14259,15848,16435,17316,
chr19   7522635   7522683 MCOLN1|NM_020533.3|non-overlapping|ATG 0 +   7522635   7522635 0,0,0  1 48, 0,
chr19   7522707   7526461 MCOLN1|NM_020533.3|overlapping|CTG 0 +   7522707   7522707 0,0,0  3 74,206,23, 0,2253,3731,
chr19   7534205   7534784 PNPLA6|NM_006702.5|non-overlapping|TTG 0 +   7534205   7534205 0,0,0  2 34,35, 0,544,
chr19   7535524   7535789 PNPLA6|NM_001166111.2|overlapping|ATC 0 +   7535524   7535524 0,0,0  2 53,1, 0,264,
chr19   7535524   7535945 PNPLA6|NM_006702.5|overlapping|ATC 0 +   7535524   7535524 0,0,0  2 53,13, 0,408,
chr19   7535537   7539989 PNPLA6|NM_001166111.2|overlapping|CTG 0 +   7535537   7535537 0,0,0  5 40,232,83,98,72, 0,251,653,911,4380,
chr19  12806629  12806641 RNASEH2A|NM_006397.3|non-overlapping|CTG 0 +  12806629  12806629 0,0,0  1 12, 0,
chr19  12806636  12806777 RNASEH2A|NM_006397.3|overlapping|ATT 0 +  12806636  12806636 0,0,0  1 141, 0,
chr19  12806656  12806722 RNASEH2A|NM_006397.3|overlapping|GTG 0 +  12806656  12806656 0,0,0  1 66, 0,
chr19  12891180  12891314 GCDH|NM_000159.4|overlapping|GTG 0 +  12891180  12891180 0,0,0  2 22,44, 0,90,
chr19  13906338  13909839 CC2D1A|NM_017721.5|overlapping|GTG 0 +  13906338  13906338 0,0,0  2 163,17, 0,3484,
chr19  14529606  14529627 TECR|NM_138501.6|non-overlapping|CTG 0 +  14529606  14529606 0,0,0  1 21, 0,
chr19  14529632  14563252 TECR|NM_138501.6|overlapping|CTG 0 +  14529632  14529632 0,0,0  3 79,51,47, 0,32892,33573,
chr19  14529683  14563252 TECR|NM_138501.6|overlapping|GTG 0 +  14529683  14529683 0,0,0  3 28,51,47, 0,32841,33522,
chr19  17555687  17555696 COLGALT1|NM_024656.4|non-overlapping|ACG 0 +  17555687  17555687 0,0,0  1 9, 0,
chr19  34365207  34365339 GPI|NM_000175.5|overlapping|CTG 0 +  34365207  34365207 0,0,0  1 132, 0,
chr19  34365246  34365339 GPI|NM_000175.5|overlapping|GTG 0 +  34365246  34365246 0,0,0  1 93, 0,
chr19  35648346  35648403 COX6B1|NM_001863.5|non-overlapping|GTG 0 +  35648346  35648346 0,0,0  1 57, 0,
chr19  35648358  35648403 COX6B1|NM_001863.5|non-overlapping|CTG 0 +  35648358  35648358 0,0,0  1 45, 0,
chr19  35648370  35648403 COX6B1|NM_001863.5|non-overlapping|TTG 0 +  35648370  35648370 0,0,0  1 33, 0,
chr19  35648382  35648403 COX6B1|NM_001863.5|non-overlapping|TTG 0 +  35648382  35648382 0,0,0  1 21, 0,
chr19  35995210  35995252 SDHAF1|NM_001042631.3|non-overlapping|CTG 0 +  35995210  35995210 0,0,0  1 42, 0,
chr19  35995216  35995252 SDHAF1|NM_001042631.3|non-overlapping|GTG 0 +  35995216  35995216 0,0,0  1 36, 0,
chr19  35995248  35995266 SDHAF1|NM_001042631.3|non-overlapping|CTG 0 +  35995248  35995248 0,0,0  1 18, 0,
chr19  38264619  38264670 SPINT2|NM_021102.4|non-overlapping|CTG 0 +  38264619  38264619 0,0,0  1 51, 0,
chr19  38264628  38264670 SPINT2|NM_021102.4|non-overlapping|CTG 0 +  38264628  38264628 0,0,0  1 42, 0,
chr19  38264666  38264885 SPINT2|NM_021102.4|non-overlapping|GTG 0 +  38264666  38264666 0,0,0  1 219, 0,
chr19  38264685  38264721 SPINT2|NM_021102.4|non-overlapping|ATC 0 +  38264685  38264685 0,0,0  1 36, 0,
chr19  38264717  38264885 SPINT2|NM_021102.4|non-overlapping|CTG 0 +  38264717  38264717 0,0,0  1 168, 0,
chr19  38264816  38264885 SPINT2|NM_021102.4|non-overlapping|TTG 0 +  38264816  38264816 0,0,0  1 69, 0,
chr19  38264851  38264914 SPINT2|NM_021102.4|overlapping|ACG 0 +  38264851  38264851 0,0,0  1 63, 0,
chr19  37907253  38029103 SIPA1L3|NM_015073.3|non-overlapping|CTG 0 +  37907253  37907253 0,0,0  2 105,15, 0,121835,
chr19  37907308  38029137 SIPA1L3|NM_015073.3|non-overlapping|CTG 0 +  37907308  37907308 0,0,0  2 50,49, 0,121780,
chr19  38029099  38029144 SIPA1L3|NM_015073.3|non-overlapping|CTG 0 +  38029099  38029099 0,0,0  1 45, 0,
chr19  38081277  38081328 SIPA1L3|NM_015073.3|non-overlapping|CTG 0 +  38081277  38081277 0,0,0  1 51, 0,
chr19  39412807  39413110 PLEKHG2|NM_022835.3|non-overlapping|CTG 0 +  39412807  39412807 0,0,0  1 303, 0,
chr19  39412927  39413110 PLEKHG2|NM_022835.3|non-overlapping|ATC 0 +  39412927  39412927 0,0,0  1 183, 0,
chr19  39412975  39413110 PLEKHG2|NM_022835.3|non-overlapping|TTG 0 +  39412975  39412975 0,0,0  1 135, 0,
chr19  39413024  39413219 PLEKHG2|NM_022835.3|non-overlapping|CTG 0 +  39413024  39413024 0,0,0  1 195, 0,
chr19  39413035  39413110 PLEKHG2|NM_022835.3|non-overlapping|ATC 0 +  39413035  39413035 0,0,0  1 75, 0,
chr19  39413082  39413196 PLEKHG2|NM_022835.3|non-overlapping|CTG 0 +  39413082  39413082 0,0,0  1 114, 0,
chr19  39413111  39413219 PLEKHG2|NM_022835.3|non-overlapping|ATT 0 +  39413111  39413111 0,0,0  1 108, 0,
chr19  39413169  39413196 PLEKHG2|NM_022835.3|non-overlapping|ATG 0 +  39413169  39413169 0,0,0  1 27, 0,
chr19  42325784  42325910 MEGF8|NM_001410.3|non-overlapping|CTG 0 +  42325784  42325784 0,0,0  1 126, 0,
chr19  42325645  42325684 MEGF8|NM_001410.3|non-overlapping|CTG 0 +  42325645  42325645 0,0,0  1 39, 0,
chr19  42325699  42325726 MEGF8|NM_001410.3|non-overlapping|CTG 0 +  42325699  42325699 0,0,0  1 27, 0,
chr19  42325728  42325803 MEGF8|NM_001410.3|non-overlapping|ACG 0 +  42325728  42325728 0,0,0  1 75, 0,
chr19  42325825  42325849 MEGF8|NM_001410.3|non-overlapping|ATG 0 +  42325825  42325825 0,0,0  1 24, 0,
chr19  42326135  42326150 MEGF8|NM_001410.3|non-overlapping|ATG 0 +  42326135  42326135 0,0,0  1 15, 0,
chr19  45001532  45001685 RELB|NM_006509.4|overlapping|ATC 0 +  45001532  45001532 0,0,0  1 153, 0,
chr19  45178824  45179727 BLOC1S3|NM_212550.5|overlapping|CTG 0 +  45178824  45178824 0,0,0  2 7,440, 0,463,
chr19  46746068  46748085 FKRP|NM_024301.5|non-overlapping|ATG 0 +  46746068  46746068 0,0,0  2 22,59, 0,1958,
chr19  46748039  46748573 FKRP|NM_024301.5|non-overlapping|CTG 0 +  46748039  46748039 0,0,0  2 49,59, 0,475,
chr19  46748050  46748527 FKRP|NM_024301.5|non-overlapping|CTG 0 +  46748050  46748050 0,0,0  2 38,13, 0,464,
chr19  48695986  48703988 FUT2|NM_000511.6|CDS_extension|AGG 0 +  48695986  48695986 0,0,0  2 103,1034, 0,6968,
chr19  48696029  48696083 FUT2|NM_000511.6|non-overlapping|CTG 0 +  48696029  48696029 0,0,0  1 54, 0,
chr19  48696051  48703687 FUT2|NM_000511.6|overlapping|CTG 0 +  48696051  48696051 0,0,0  2 38,733, 0,6903,
chr20    408086    408104 RBCK1|NM_031229.4|non-overlapping|ATG 0 +    408086    408086 0,0,0  1 18, 0,
chr20    408342    408705 RBCK1|NM_031229.4|non-overlapping|CTG 0 +    408342    408342 0,0,0  1 363, 0,
chr20    408518    408662 RBCK1|NM_031229.4|non-overlapping|CTG 0 +    408518    408518 0,0,0  1 144, 0,
chr20    408585    408705 RBCK1|NM_031229.4|non-overlapping|ATG 0 +    408585    408585 0,0,0  1 120, 0,
chr20   3209522   3209591 ITPA|NM_033453.4|overlapping|GTG 0 +   3209522   3209522 0,0,0  1 69, 0,
chr20   3209531   3209591 ITPA|NM_033453.4|overlapping|CTG 0 +   3209531   3209531 0,0,0  1 60, 0,
chr20   8132293   8132302 PLCB1|NM_015192.4|non-overlapping|ATG 0 +   8132293   8132293 0,0,0  1 9, 0,
chr20   9217417   9307806 PLCB4|NM_000933.4|non-overlapping|GTG 0 +   9217417   9217417 0,0,0  2 35,7, 0,90382,
chr20  17969074  17969119 MGME1|NM_052865.4|non-overlapping|ATG 0 +  17969074  17969074 0,0,0  1 45, 0,
chr20  17969129  17969842 MGME1|NM_052865.4|non-overlapping|GTG 0 +  17969129  17969129 0,0,0  2 12,42, 0,671,
chr20  17969810  17969837 MGME1|NM_052865.4|non-overlapping|ATA 0 +  17969810  17969810 0,0,0  1 27, 0,
chr20  21126096  21132099 KIZ|NM_018474.6|overlapping|CTG 0 +  21126096  21126096 0,0,0  2 108,3, 0,6000,
chr20  23362212  23364430 GZF1|NM_022482.5|overlapping|CTG 0 +  23362212  23362212 0,0,0  2 25,68, 0,2150,
chr20  25407712  25407724 GINS1|NM_021067.5|non-overlapping|CTG 0 +  25407712  25407712 0,0,0  1 12, 0,
chr20  25407740  25407848 GINS1|NM_021067.5|overlapping|GTG 0 +  25407740  25407740 0,0,0  1 108, 0,
chr20  25407768  25407777 GINS1|NM_021067.5|non-overlapping|TTG 0 +  25407768  25407768 0,0,0  1 9, 0,
chr20  32762431  32762569 DNMT3B|NM_006892.4|non-overlapping|CTG 0 +  32762431  32762431 0,0,0  1 138, 0,
chr20  32762460  32762556 DNMT3B|NM_006892.4|non-overlapping|GTG 0 +  32762460  32762460 0,0,0  1 96, 0,
chr20  32762483  32807903 DNMT3B|NM_006892.4|CDS_extension|ACG 0 +  32762483  32762483 0,0,0 23 216,148,62,102,126,222,159,108,145,60,126,45,80,113,184,85,146,91,149,86,70,119,142, 0,17834,18869,22274,24018,24746,26370,29117,30142,31052,32925,33166,34306,34703,35976,36760,37669,38351,38794,39901,42854,43725,45278,
chr20  32762501  32807903 DNMT3B|NM_006892.4|CDS_extension|CTG 0 +  32762501  32762501 0,0,0 23 198,148,62,102,126,222,159,108,145,60,126,45,80,113,184,85,146,91,149,86,70,119,142, 0,17816,18851,22256,24000,24728,26352,29099,30124,31034,32907,33148,34288,34685,35958,36742,37651,38333,38776,39883,42836,43707,45260,
chr20  32762546  32807903 DNMT3B|NM_006892.4|CDS_extension|CTG 0 +  32762546  32762546 0,0,0 23 153,148,62,102,126,222,159,108,145,60,126,45,80,113,184,85,146,91,149,86,70,119,142, 0,17771,18806,22211,23955,24683,26307,29054,30079,30989,32862,33103,34243,34640,35913,36697,37606,38288,38731,39838,42791,43662,45215,
chr20  32762582  32807903 DNMT3B|NM_006892.4|CDS_extension|ATC 0 +  32762582  32762582 0,0,0 23 117,148,62,102,126,222,159,108,145,60,126,45,80,113,184,85,146,91,149,86,70,119,142, 0,17735,18770,22175,23919,24647,26271,29018,30043,30953,32826,33067,34207,34604,35877,36661,37570,38252,38695,39802,42755,43626,45179,
chr20  32762595  32780327 DNMT3B|NM_006892.4|overlapping|ATT 0 +  32762595  32762595 0,0,0  2 104,10, 0,17722,
chr20  34369416  34369449 ITCH|NM_031483.7|non-overlapping|TTG 0 +  34369416  34369416 0,0,0  1 33, 0,
chr20  35458334  35458361 CEP250|NM_007186.6|non-overlapping|GTG 0 +  35458334  35458334 0,0,0  1 27, 0,
chr20  35458337  35458361 CEP250|NM_007186.6|non-overlapping|CTG 0 +  35458337  35458337 0,0,0  1 24, 0,
chr20  35460003  35460012 CEP250|NM_007186.6|non-overlapping|CTG 0 +  35460003  35460003 0,0,0  1 9, 0,
chr20  35460016  35460073 CEP250|NM_007186.6|non-overlapping|ATA 0 +  35460016  35460016 0,0,0  1 57, 0,
chr20  35460033  35460063 CEP250|NM_007186.6|non-overlapping|CTG 0 +  35460033  35460033 0,0,0  1 30, 0,
chr20  35460058  35460073 CEP250|NM_007186.6|non-overlapping|ATT 0 +  35460058  35460058 0,0,0  1 15, 0,
chr20  35460089  35460098 CEP250|NM_007186.6|non-overlapping|ATT 0 +  35460089  35460089 0,0,0  1 9, 0,
chr20  35462292  35462337 CEP250|NM_007186.6|non-overlapping|ATG 0 +  35462292  35462292 0,0,0  1 45, 0,
chr20  43591012  43594696 IFT52|NM_001303458.3|non-overlapping|ATG 0 +  43591012  43591012 0,0,0  2 17,4, 0,3680,
chr20  48921735  48921771 ARFGEF2|NM_006420.3|non-overlapping|ATG 0 +  48921735  48921735 0,0,0  1 36, 0,
chr20  48921767  48921947 ARFGEF2|NM_006420.3|overlapping|CTG 0 +  48921767  48921767 0,0,0  1 180, 0,
chr21  33403454  33403478 IFNGR2|NM_005534.4|non-overlapping|ATG 0 +  33403454  33403454 0,0,0  1 24, 0,
chr21  33403472  33403478 IFNGR2|NM_005534.4|non-overlapping|ACG 0 +  33403472  33403472 0,0,0  1 6, 0,
chr21  45405175  45405214 COL18A1|NM_001379500.1|non-overlapping|GTG 0 +  45405175  45405175 0,0,0  1 39, 0,
chr21  45405199  45405214 COL18A1|NM_001379500.1|non-overlapping|ATC 0 +  45405199  45405199 0,0,0  1 15, 0,
chr21  45405210  45468505 COL18A1|NM_001379500.1|overlapping|CTG 0 +  45405210  45405210 0,0,0  3 31,95,264, 0,168,63031,
chr21  45405219  45468505 COL18A1|NM_001379500.1|overlapping|CTG 0 +  45405219  45405219 0,0,0  3 22,95,264, 0,159,63022,
chr22  17084991  17097797 IL17RA|NM_014339.7|overlapping|GTG 0 +  17084991  17084991 0,0,0  3 238,25,1, 0,12070,12805,
chr22  17085045  17097797 IL17RA|NM_014339.7|overlapping|CTG 0 +  17085045  17085045 0,0,0  3 184,25,1, 0,12016,12751,
chr22  18150178  18157657 USP18|NM_017414.4|non-overlapping|GTG 0 +  18150178  18150178 0,0,0  2 44,100, 0,7379,
chr22  18150198  18157584 USP18|NM_017414.4|non-overlapping|CTG 0 +  18150198  18150198 0,0,0  2 24,27, 0,7359,
chr22  18150210  18157584 USP18|NM_017414.4|non-overlapping|ATG 0 +  18150210  18150210 0,0,0  2 12,27, 0,7347,
chr22  18157567  18157657 USP18|NM_017414.4|non-overlapping|GTG 0 +  18157567  18157567 0,0,0  1 90, 0,
chr22  18157613  18157667 USP18|NM_017414.4|overlapping|CTG 0 +  18157613  18157613 0,0,0  1 54, 0,
chr22  25742259  25763366 MYO18B|NM_032608.7|overlapping|GTG 0 +  25742259  25742259 0,0,0  3 34,148,136, 0,18724,20971,
chr22  30607198  30607210 TCN2|NM_000355.4|non-overlapping|ATG 0 +  30607198  30607198 0,0,0  1 12, 0,
chr22  32474829  32475006 FBXO7|NM_012179.4|overlapping|GTG 0 +  32474829  32474829 0,0,0  1 177, 0,
chr22  32474846  32474897 FBXO7|NM_012179.4|non-overlapping|GTG 0 +  32474846  32474846 0,0,0  1 51, 0,
chr22  35400161  35400191 MCM5|NM_006739.4|non-overlapping|GTG 0 +  35400161  35400161 0,0,0  1 30, 0,
chr22  40346536  40346650 ADSL|NM_000026.4|overlapping|CTG 0 +  40346536  40346536 0,0,0  1 114, 0,
chr22  40857162  40881980 XPNPEP3|NM_022098.4|overlapping|ACG 0 +  40857162  40857162 0,0,0  3 83,117,211, 0,11836,24607,
chrX  21839640  21839655 MBTPS2|NM_015884.4|non-overlapping|ATG 0 +  21839640  21839640 0,0,0  1 15, 0,
chrX  21839643  21839655 MBTPS2|NM_015884.4|non-overlapping|CTG 0 +  21839643  21839643 0,0,0  1 12, 0,
chrX  21940753  21967216 SMS|NM_004595.5|overlapping|CTG 0 +  21940753  21940753 0,0,0  2 120,21, 0,26442,
chrX  21940801  21967216 SMS|NM_004595.5|overlapping|ATG 0 +  21940801  21940801 0,0,0  2 72,21, 0,26394,
chrX  40580995  40589007 ATP6AP2|NM_005765.3|overlapping|CTG 0 +  40580995  40580995 0,0,0  2 107,22, 0,7990,
chrX  41085466  41085499 USP9X|NM_001039590.3|non-overlapping|ACG 0 +  41085466  41085466 0,0,0  1 33, 0,
chrX  47145284  47145302 RBM10|NM_005676.5|non-overlapping|GTG 0 +  47145284  47145284 0,0,0  1 18, 0,
chrX  47145292  47186599 RBM10|NM_005676.5|CDS_extension|CTG 0 +  47145292  47145292 0,0,0 24 193,142,184,231,70,74,87,61,177,161,98,88,187,140,118,92,165,150,66,189,75,107,130,126, 0,2064,24022,25735,27835,29726,31207,33810,34026,34587,34919,35126,35922,36214,36456,36658,36869,39762,40009,40149,40423,40772,40965,41181,
chrX  47145292  47147399 RBM10|NM_001204468.2|overlapping|CTG 0 +  47145292  47145292 0,0,0  2 224,43, 0,2064,
chrX  47145318  47145408 RBM10|NM_005676.5|non-overlapping|CTG 0 +  47145318  47145318 0,0,0  1 90, 0,
chrX  47145360  47145408 RBM10|NM_005676.5|non-overlapping|CTG 0 +  47145360  47145360 0,0,0  1 48, 0,
chrX  47145378  47145408 RBM10|NM_005676.5|non-overlapping|TTG 0 +  47145378  47145378 0,0,0  1 30, 0,
chrX  47193858  47193987 UBA1|NM_003334.4|non-overlapping|GTG 0 +  47193858  47193858 0,0,0  1 129, 0,
chrX  47193882  47193987 UBA1|NM_003334.4|non-overlapping|ACG 0 +  47193882  47193882 0,0,0  1 105, 0,
chrX  47193913  47214929 UBA1|NM_003334.4|CDS_extension|ATT 0 +  47193913  47193913 0,0,0 26 111,117,59,169,135,107,91,133,98,147,177,105,81,156,166,197,65,196,75,190,89,93,192,102,101,136, 0,4889,5134,5295,5566,6980,7362,7564,8242,8444,8724,9029,9220,9627,12034,12334,15709,16014,16928,17122,18510,18857,19076,20413,20623,20880,
chrX  47193956  47198803 UBA1|NM_003334.4|non-overlapping|GTG 0 +  47193956  47193956 0,0,0  2 68,1, 0,4846,
chrX  47193969  47193987 UBA1|NM_003334.4|non-overlapping|TTG 0 +  47193969  47193969 0,0,0  1 18, 0,
chrX  48476241  48476274 FTSJ1|NM_012280.4|non-overlapping|ATG 0 +  48476241  48476241 0,0,0  1 33, 0,
chrX  48476314  48476326 FTSJ1|NM_012280.4|non-overlapping|CTG 0 +  48476314  48476314 0,0,0  1 12, 0,
chrX  48476379  48477973 FTSJ1|NM_012280.4|non-overlapping|CTG 0 +  48476379  48476379 0,0,0  2 17,13, 0,1581,
chrX  48477995  48478031 FTSJ1|NM_012280.4|non-overlapping|CTG 0 +  48477995  48477995 0,0,0  1 36, 0,
chrX  48898269  48898347 PQBP1|NM_005710.2|non-overlapping|CTG 0 +  48898269  48898269 0,0,0  1 78, 0,
chrX  48898314  48898347 PQBP1|NM_005710.2|non-overlapping|ATG 0 +  48898314  48898314 0,0,0  1 33, 0,
chrX  49235478  49235535 CCDC22|NM_014008.5|non-overlapping|ATG 0 +  49235478  49235478 0,0,0  1 57, 0,
chrX  49235539  49237130 CCDC22|NM_014008.5|overlapping|CTG 0 +  49235539  49235539 0,0,0  2 147,45, 0,1546,
chrX  49235554  49237130 CCDC22|NM_014008.5|overlapping|ACG 0 +  49235554  49235554 0,0,0  2 132,45, 0,1531,
chrX  49235601  49237141 CCDC22|NM_014008.5|overlapping|CTG 0 +  49235601  49235601 0,0,0  2 85,56, 0,1484,
chrX  54807774  54809328 MAGED2|NM_177433.3|non-overlapping|ACG 0 +  54807774  54807774 0,0,0  2 28,26, 0,1528,
chrX  54809311  54809365 MAGED2|NM_177433.3|overlapping|TTG 0 +  54809311  54809311 0,0,0  1 54, 0,
chrX  54809323  54809365 MAGED2|NM_177433.3|overlapping|ATT 0 +  54809323  54809323 0,0,0  1 42, 0,
chrX  65667774  65716897 MSN|NM_002444.3|overlapping|CTG 0 +  65667774  65667774 0,0,0  2 79,80, 0,49043,
chrX  70290127  70290438 KIF4A|NM_012310.5|non-overlapping|ACG 0 +  70290127  70290127 0,0,0  2 23,1, 0,310,
chrX  70452361  70452595 DLG3|NM_020730.3|non-overlapping|CTG 0 +  70452361  70452361 0,0,0  1 234, 0,
chrX  70452372  70452384 DLG3|NM_020730.3|non-overlapping|ATT 0 +  70452372  70452372 0,0,0  1 12, 0,
chrX  70452410  70452425 DLG3|NM_020730.3|non-overlapping|CTG 0 +  70452410  70452410 0,0,0  1 15, 0,
chrX  71118563  71118776 MED12|NM_005120.3|overlapping|ATG 0 +  71118563  71118563 0,0,0  1 213, 0,
chrX  71118606  71118624 MED12|NM_005120.3|non-overlapping|ATG 0 +  71118606  71118606 0,0,0  1 18, 0,
chrX  71118714  71119377 MED12|NM_005120.3|overlapping|CTG 0 +  71118714  71118714 0,0,0  2 139,5, 0,658,
chrX  71533125  71533137 OGT|NM_181672.3|non-overlapping|ATG 0 +  71533125  71533125 0,0,0  1 12, 0,
chrX  77910729  77910750 ATP7A|NM_000052.7|non-overlapping|GTG 0 +  77910729  77910729 0,0,0  1 21, 0,
chrX  77910788  77910815 ATP7A|NM_000052.7|non-overlapping|ACG 0 +  77910788  77910788 0,0,0  1 27, 0,
chrX  77910817  77910826 ATP7A|NM_000052.7|non-overlapping|ATA 0 +  77910817  77910817 0,0,0  1 9, 0,
chrX  78104257  78104302 PGK1|NM_000291.4|non-overlapping|CTG 0 +  78104257  78104257 0,0,0  1 45, 0,
chrX  78104276  78104354 PGK1|NM_000291.4|overlapping|ACG 0 +  78104276  78104276 0,0,0  1 78, 0,
chrX  78104306  78104354 PGK1|NM_000291.4|overlapping|ATC 0 +  78104306  78104306 0,0,0  1 48, 0,
chrX 107628517 107628529 PRPS1|NM_002764.4|non-overlapping|ATG 0 + 107628517 107628517 0,0,0  1 12, 0,
chrX 107628579 107628594 PRPS1|NM_002764.4|non-overlapping|CTG 0 + 107628579 107628579 0,0,0  1 15, 0,
chrX 107628590 107628602 PRPS1|NM_002764.4|non-overlapping|GTG 0 + 107628590 107628590 0,0,0  1 12, 0,
chrX 119574625 119574956 UBE2A|NM_003336.4|overlapping|CTG 0 + 119574625 119574625 0,0,0  2 130,56, 0,275,
chrX 119574683 119574698 UBE2A|NM_003336.4|non-overlapping|ATG 0 + 119574683 119574683 0,0,0  1 15, 0,
chrX 119871888 119871897 NDUFA1|NM_004541.4|non-overlapping|TTG 0 + 119871888 119871888 0,0,0  1 9, 0,
chrX 119871900 119871963 NDUFA1|NM_004541.4|overlapping|ACG 0 + 119871900 119871900 0,0,0  1 63, 0,
chrX 123860167 123885666 XIAP|NM_001167.4|overlapping|CTG 0 + 123860167 123860167 0,0,0  2 126,36, 0,25463,
chrX 123860191 123885666 XIAP|NM_001167.4|overlapping|TTG 0 + 123860191 123860191 0,0,0  2 102,36, 0,25439,
chrX 123860242 123885666 XIAP|NM_001167.4|overlapping|TTG 0 + 123860242 123860242 0,0,0  2 51,36, 0,25388,
chrX 129540329 129540422 OCRL|NM_000276.4|non-overlapping|CTG 0 + 129540329 129540329 0,0,0  1 93, 0,
chrX 134373342 134377581 PHF6|NM_032458.3|non-overlapping|ATG 0 + 134373342 134373342 0,0,0  2 125,10, 0,4229,
chrX 134373389 134377601 PHF6|NM_032458.3|non-overlapping|CTG 0 + 134373389 134373389 0,0,0  2 78,30, 0,4182,
chrX 134373427 134377588 PHF6|NM_032458.3|non-overlapping|TTG 0 + 134373427 134373427 0,0,0  2 40,17, 0,4144,
chrX 134377589 134377601 PHF6|NM_032458.3|non-overlapping|GTG 0 + 134377589 134377589 0,0,0  1 12, 0,
chrX 134460181 134460280 HPRT1|NM_000194.3|non-overlapping|ACG 0 + 134460181 134460181 0,0,0  1 99, 0,
chrX 134460276 134473359 HPRT1|NM_000194.3|overlapping|CTG 0 + 134460276 134460276 0,0,0  2 62,1, 0,13082,
chrX 136147603 136206520 FHL1|NM_001449.5|overlapping|CTG 0 + 136147603 136147603 0,0,0  3 25,74,114, 0,22303,58803,
chrX 136169959 136206520 FHL1|NM_001449.5|overlapping|CTG 0 + 136169959 136169959 0,0,0  2 21,114, 0,36447,
chrX 137566293 137566413 ZIC3|NM_003413.4|non-overlapping|CTG 0 + 137566293 137566293 0,0,0  1 120, 0,
chrX 137566418 137566424 ZIC3|NM_003413.4|non-overlapping|ATC 0 + 137566418 137566418 0,0,0  1 6, 0,
chrX 137566564 137566783 ZIC3|NM_003413.4|overlapping|TTG 0 + 137566564 137566564 0,0,0  1 219, 0,
chrX 137566611 137566695 ZIC3|NM_003413.4|overlapping|ACG 0 + 137566611 137566611 0,0,0  1 84, 0,
chrX 148500824 148500977 AFF2|NM_002025.4|non-overlapping|CTG 0 + 148500824 148500824 0,0,0  1 153, 0,
chrX 148500956 148500977 AFF2|NM_002025.4|non-overlapping|ATG 0 + 148500956 148500956 0,0,0  1 21, 0,
chrX 148501026 148652123 AFF2|NM_002025.4|overlapping|CTG 0 + 148501026 148501026 0,0,0  2 118,125, 0,150972,
chrX 150568631 150596564 MTM1|NM_000252.3|overlapping|CTG 0 + 150568631 150568631 0,0,0  3 31,73,67, 0,23973,27866,
chrX 151397297 151397336 VMA21|NM_001017980.4|overlapping|ACG 0 + 151397297 151397297 0,0,0  1 39, 0,
chrX 152831085 152869116 NSDHL|NM_015922.3|CDS_extension|CTG 0 + 152831085 152831085 0,0,0  8 32,151,159,147,129,143,103,333, 0,15196,19179,27684,31510,34733,36485,37698,
chrX 153494992 153495010 BGN|NM_001711.6|non-overlapping|CTG 0 + 153494992 153494992 0,0,0  1 18, 0,
chrX 153495047 153504671 BGN|NM_001711.6|overlapping|GTG 0 + 153495047 153495047 0,0,0  2 66,51, 0,9573,
chrX 153687949 153687964 SLC6A8|NM_005629.4|non-overlapping|GTG 0 + 153687949 153687949 0,0,0  1 15, 0,
chrX 153688179 153688200 SLC6A8|NM_005629.4|non-overlapping|ATG 0 + 153688179 153688179 0,0,0  1 21, 0,
chrX 153688341 153688389 SLC6A8|NM_005629.4|non-overlapping|ATG 0 + 153688341 153688341 0,0,0  1 48, 0,
chrX 153724873 153725164 ABCD1|NM_000033.4|non-overlapping|CTG 0 + 153724873 153724873 0,0,0  1 291, 0,
chrX 153724951 153725164 ABCD1|NM_000033.4|non-overlapping|AAG 0 + 153724951 153724951 0,0,0  1 213, 0,
chrX 153725039 153725312 ABCD1|NM_000033.4|overlapping|TTG 0 + 153725039 153725039 0,0,0  1 273, 0,
chrX 153725065 153725164 ABCD1|NM_000033.4|non-overlapping|CTG 0 + 153725065 153725065 0,0,0  1 99, 0,
chrX 154379317 154379362 EMD|NM_000117.3|non-overlapping|ACG 0 + 154379317 154379317 0,0,0  1 45, 0,
chrX 154379336 154379471 EMD|NM_000117.3|non-overlapping|GTG 0 + 154379336 154379336 0,0,0  1 135, 0,
chrX 154379358 154379442 EMD|NM_000117.3|non-overlapping|GTG 0 + 154379358 154379358 0,0,0  1 84, 0,
chrX 154379382 154379442 EMD|NM_000117.3|non-overlapping|ATG 0 + 154379382 154379382 0,0,0  1 60, 0,
chrX 154398317 154398353 RPL10|NM_006013.5|non-overlapping|ATG 0 + 154398317 154398317 0,0,0  1 36, 0,
chrX 154398275 154398353 RPL10|NM_006013.5|non-overlapping|ATG 0 + 154398275 154398275 0,0,0  1 78, 0,
chrX 154398356 154398503 RPL10|NM_006013.5|non-overlapping|ATG 0 + 154398356 154398356 0,0,0  2 38,7, 0,140,
chrX 154411611 154414128 TAZ|NM_000116.5|overlapping|ACG 0 + 154411611 154411611 0,0,0  5 341,129,46,86,28, 0,474,1595,1870,2489,
chrX 154411675 154411786 TAZ|NM_000116.5|non-overlapping|CTG 0 + 154411675 154411675 0,0,0  1 111, 0,
chrX 154411755 154414128 TAZ|NM_000116.5|overlapping|GTG 0 + 154411755 154411755 0,0,0  5 197,129,46,86,28, 0,330,1451,1726,2345,
chr1   2412468   2412534 PEX10|NM_153818.2|overlapping|GTG 0 -   2412468   2412468 0,0,0  1 66, 0,
chr1   3856991   3857192 CEP104|NM_014704.4|non-overlapping|ATG 0 -   3856991   3856991 0,0,0  1 201, 0,
chr1   5992295   5992310 NPHP4|NM_015102.5|non-overlapping|GTG 0 -   5992295   5992295 0,0,0  1 15, 0,
chr1   5992243   5992354 NPHP4|NM_015102.5|non-overlapping|GTG 0 -   5992243   5992243 0,0,0  1 111, 0,
chr1  11847680  11847710 NPPA|NM_006172.4|overlapping|GTG 0 -  11847680  11847680 0,0,0  1 30, 0,
chr1  17005067  17011757 ATP13A2|NM_022089.4|overlapping|ATG 0 -  17005067  17005067 0,0,0  4 5,183,95,29, 0,306,616,6661,
chr1  17011734  17011875 ATP13A2|NM_022089.4|overlapping|CTG 0 -  17011734  17011734 0,0,0  1 141, 0,
chr1  18902676  18902712 ALDH4A1|NM_003748.4|non-overlapping|ATG 0 -  18902676  18902676 0,0,0  1 36, 0,
chr1  27154437  27154452 SLC9A1|NM_003047.5|non-overlapping|ATG 0 -  27154437  27154437 0,0,0  1 15, 0,
chr1  27154455  27154467 SLC9A1|NM_003047.5|non-overlapping|ATG 0 -  27154455  27154455 0,0,0  1 12, 0,
chr1  27154455  27154473 SLC9A1|NM_003047.5|non-overlapping|ATG 0 -  27154455  27154455 0,0,0  1 18, 0,
chr1  27154455  27154527 SLC9A1|NM_003047.5|non-overlapping|TTG 0 -  27154455  27154455 0,0,0  1 72, 0,
chr1  27154405  27154576 SLC9A1|NM_003047.5|non-overlapping|TTG 0 -  27154405  27154405 0,0,0  1 171, 0,
chr1  27154455  27154653 SLC9A1|NM_003047.5|non-overlapping|CTG 0 -  27154455  27154455 0,0,0  1 198, 0,
chr1  27154742  27154802 SLC9A1|NM_003047.5|non-overlapping|CTG 0 -  27154742  27154742 0,0,0  1 60, 0,
chr1  27154768  27155005 SLC9A1|NM_003047.5|non-overlapping|CTG 0 -  27154768  27154768 0,0,0  1 237, 0,
chr1  27154768  27155083 SLC9A1|NM_003047.5|non-overlapping|CTG 0 -  27154768  27154768 0,0,0  1 315, 0,
chr1  27154768  27155089 SLC9A1|NM_003047.5|non-overlapping|CTG 0 -  27154768  27154768 0,0,0  1 321, 0,
chr1  33036866  33036878 AK2|NM_001625.4|non-overlapping|CTG 0 -  33036866  33036866 0,0,0  1 12, 0,
chr1  37554074  37554260 SNIP1|NM_024700.4|overlapping|CTG 0 -  37554074  37554074 0,0,0  1 186, 0,
chr1  42740095  42740134 CLDN19|NM_148960.3|non-overlapping|ATG 0 -  42740095  42740095 0,0,0  1 39, 0,
chr1  44986497  44986524 EIF2B3|NM_020365.5|non-overlapping|CTG 0 -  44986497  44986497 0,0,0  1 27, 0,
chr1  44986497  44986536 EIF2B3|NM_020365.5|non-overlapping|GTG 0 -  44986497  44986497 0,0,0  1 39, 0,
chr1  44986538  44986586 EIF2B3|NM_020365.5|non-overlapping|GTG 0 -  44986538  44986538 0,0,0  1 48, 0,
chr1  45521824  45521869 PRDX1|NM_002574.4|non-overlapping|CTG 0 -  45521824  45521824 0,0,0  1 45, 0,
chr1  45521824  45521842 PRDX1|NM_002574.4|non-overlapping|TTG 0 -  45521824  45521824 0,0,0  1 18, 0,
chr1  46197835  46197859 POMGNT1|NM_017739.4|non-overlapping|ATG 0 -  46197835  46197835 0,0,0  1 24, 0,
chr1  46198377  46198419 POMGNT1|NM_017739.4|non-overlapping|ATG 0 -  46198377  46198377 0,0,0  1 42, 0,
chr1  52404361  52404379 ORC1|NM_004153.4|non-overlapping|CTG 0 -  52404361  52404361 0,0,0  1 18, 0,
chr1  54887058  54887175 DHCR24|NM_014762.4|overlapping|CTG 0 -  54887058  54887058 0,0,0  1 117, 0,
chr1  62663109  62688370 DOCK7|NM_001271999.2|overlapping|CTG 0 -  62663109  62663109 0,0,0  2 21,144, 0,25117,
chr1  67054047  67054218 SLC35D1|NM_015139.3|non-overlapping|ATG 0 -  67054047  67054047 0,0,0  1 171, 0,
chr1  67054342  67054348 SLC35D1|NM_015139.3|non-overlapping|ATG 0 -  67054342  67054342 0,0,0  1 6, 0,
chr1  85276303  85276441 BCL10|NM_003921.5|overlapping|ATT 0 -  85276303  85276303 0,0,0  1 138, 0,
chr1  97920930  97920951 DPYD|NM_000110.4|non-overlapping|CTG 0 -  97920930  97920930 0,0,0  1 21, 0,
chr1  97920972  97920987 DPYD|NM_000110.4|non-overlapping|CTG 0 -  97920972  97920972 0,0,0  1 15, 0,
chr1 100085327 100132856 SASS6|NM_194292.3|CDS_extension|CTG 0 - 100085327 100085327 0,0,0 17 107,95,98,129,137,82,180,90,195,192,120,66,172,105,80,61,107, 0,208,2811,17627,20439,21584,22046,22300,22482,24964,33690,35066,36050,37052,37882,40554,47422,
chr1 109075964 109075973 TAF13|NM_005645.4|non-overlapping|ACG 0 - 109075964 109075964 0,0,0  1 9, 0,
chr1 109064522 109075992 TAF13|NM_005645.4|CDS_extension|CTG 0 - 109064522 109064522 0,0,0  4 171,98,79,72, 0,1612,10464,11398,
chr1 115293669 115293714 NGF|NM_002506.3|non-overlapping|ATG 0 - 115293669 115293669 0,0,0  1 45, 0,
chr1 115768470 115768710 CASQ2|NM_001232.4|overlapping|CTG 0 - 115768470 115768470 0,0,0  1 240, 0,
chr1 116666735 116666852 IGSF3|NM_001542.4|non-overlapping|ATG 0 - 116666735 116666735 0,0,0  1 117, 0,
chr1 116666891 116666924 IGSF3|NM_001542.4|non-overlapping|CTG 0 - 116666891 116666891 0,0,0  1 33, 0,
chr1 116667659 116667668 IGSF3|NM_001542.4|non-overlapping|ATG 0 - 116667659 116667659 0,0,0  1 9, 0,
chr1 117920401 117929466 GDAP2|NM_017686.4|non-overlapping|ATG 0 - 117920401 117920401 0,0,0  2 23,19, 0,9046,
chr1 117929487 117929520 GDAP2|NM_017686.4|non-overlapping|ATG 0 - 117929487 117929487 0,0,0  1 33, 0,
chr1 117920295 117929564 GDAP2|NM_017686.4|overlapping|TTG 0 - 117920295 117920295 0,0,0  2 129,117, 0,9152,
chr1 150067792 150067861 VPS45|NM_007259.5|overlapping|CTG 0 + 150067792 150067792 0,0,0  1 69, 0,
chr1 151346507 151346564 RFX5|NM_000449.4|non-overlapping|ATG 0 - 151346507 151346507 0,0,0  1 57, 0,
chr1 151347223 151347232 RFX5|NM_000449.4|non-overlapping|CTG 0 - 151347223 151347223 0,0,0  1 9, 0,
chr1 155969193 155978535 ARHGEF2|NM_004723.4|overlapping|CTG 0 - 155969193 155969193 0,0,0  2 107,469, 0,8873,
chr1 160031792 160031834 PIGM|NM_145167.3|non-overlapping|ATG 0 - 160031792 160031792 0,0,0  1 42, 0,
chr1 165768774 165768807 TMCO1|NM_019026.6|non-overlapping|CTG 0 - 165768774 165768774 0,0,0  1 33, 0,
chr1 165768774 165768846 TMCO1|NM_019026.6|non-overlapping|GTG 0 - 165768774 165768774 0,0,0  1 72, 0,
chr1 167518461 167518482 CD247|NM_198053.3|overlapping|CTG 0 - 167518461 167518461 0,0,0  1 21, 0,
chr1 167518461 167518512 CD247|NM_198053.3|overlapping|CTG 0 - 167518461 167518461 0,0,0  1 51, 0,
chr1 167431680 167518558 CD247|NM_198053.3|CDS_extension|ATA 0 - 167431680 167431680 0,0,0  8 66,36,57,36,81,57,104,151, 0,1343,2339,3718,6889,7663,8983,86727,
chr1 167518565 167518577 CD247|NM_198053.3|non-overlapping|CTG 0 - 167518565 167518565 0,0,0  1 12, 0,
chr1 169485908 169485923 SLC19A2|NM_006996.3|non-overlapping|CTG 0 - 169485908 169485908 0,0,0  1 15, 0,
chr1 172442639 172442657 PIGC|NM_002642.4|non-overlapping|ATG 0 - 172442639 172442639 0,0,0  1 18, 0,
chr1 172442690 172442729 PIGC|NM_002642.4|non-overlapping|ATG 0 - 172442690 172442690 0,0,0  1 39, 0,
chr1 172442743 172442773 PIGC|NM_002642.4|non-overlapping|CTG 0 - 172442743 172442743 0,0,0  1 30, 0,
chr1 172442763 172442817 PIGC|NM_002642.4|non-overlapping|TTG 0 - 172442763 172442763 0,0,0  1 54, 0,
chr1 172442763 172444032 PIGC|NM_002642.4|non-overlapping|CTG 0 - 172442763 172442763 0,0,0  2 90,45, 0,1224,
chr1 182390728 182390800 GLUL|NM_002065.7|non-overlapping|ATG 0 - 182390728 182390728 0,0,0  1 72, 0,
chr1 182390728 182390809 GLUL|NM_002065.7|non-overlapping|ATG 0 - 182390728 182390728 0,0,0  1 81, 0,
chr1 182384404 182391693 GLUL|NM_002065.7|CDS_extension|CTG 0 - 182384404 182384404 0,0,0  8 319,200,128,147,162,179,356,15, 0,952,1355,1851,2726,4167,6092,7274,
chr1 182391726 182391750 GLUL|NM_002065.7|non-overlapping|CTG 0 - 182391726 182391726 0,0,0  1 24, 0,
chr1 182391756 182391780 GLUL|NM_002065.7|non-overlapping|GTG 0 - 182391756 182391756 0,0,0  1 24, 0,
chr1 197084323 197146533 ASPM|NM_018136.5|CDS_extension|CTG 0 - 197084323 197084323 0,0,0 28 103,170,177,155,193,192,150,210,97,167,4755,195,129,143,208,222,86,146,176,131,142,68,246,147,105,1480,144,393, 0,2479,3932,5606,5872,6526,7583,8728,9760,11674,16107,33465,37591,37835,38064,39786,40546,40722,44166,44863,45591,47961,49026,50772,55443,58007,59633,61817,
chr1 200618806 200618818 KIF14|NM_014875.3|non-overlapping|ATG 0 - 200618806 200618806 0,0,0  1 12, 0,
chr1 200618833 200620492 KIF14|NM_014875.3|non-overlapping|CTG 0 - 200618833 200618833 0,0,0  2 5,82, 0,1577,
chr1 200620413 200620548 KIF14|NM_014875.3|non-overlapping|ATT 0 - 200620413 200620413 0,0,0  1 135, 0,
chr1 200618833 200620639 KIF14|NM_014875.3|non-overlapping|CTG 0 - 200618833 200618833 0,0,0  2 5,229, 0,1577,
chr1 200666718 200669838 DDX59|NM_001031725.6|overlapping|CTG 0 - 200666718 200666718 0,0,0  2 33,72, 0,3048,
chr1 202335732 202335798 UBE2T|NM_014176.4|overlapping|GTG 0 - 202335732 202335732 0,0,0  1 66, 0,
chr1 202808117 202808405 KDM5B|NM_006618.5|overlapping|CTG 0 - 202808117 202808117 0,0,0  1 288, 0,
chr1 204411486 204411642 PPP1R15B|NM_032833.5|non-overlapping|ATG 0 - 204411486 204411486 0,0,0  1 156, 0,
chr1 204411663 204411690 PPP1R15B|NM_032833.5|non-overlapping|ATG 0 - 204411663 204411663 0,0,0  1 27, 0,
chr1 204411680 204411737 PPP1R15B|NM_032833.5|non-overlapping|CTG 0 - 204411680 204411680 0,0,0  1 57, 0,
chr1 204411451 204411766 PPP1R15B|NM_032833.5|non-overlapping|ATC 0 - 204411451 204411451 0,0,0  1 315, 0,
chr1 211675462 211675516 NEK2|NM_001204183.2|overlapping|CTG 0 - 211675462 211675462 0,0,0  1 54, 0,
chr1 211675508 211675601 NEK2|NM_001204183.2|non-overlapping|GTG 0 - 211675508 211675508 0,0,0  1 93, 0,
chr1 214464862 214464931 PTPN14|NM_005401.5|non-overlapping|ATG 0 - 214464862 214464862 0,0,0  1 69, 0,
chr1 214551186 214551201 PTPN14|NM_005401.5|non-overlapping|ACG 0 - 214551186 214551186 0,0,0  1 15, 0,
chr1 214464885 214551275 PTPN14|NM_005401.5|non-overlapping|CTG 0 - 214464885 214464885 0,0,0  2 72,93, 0,86297,
chr1 214551186 214551312 PTPN14|NM_005401.5|non-overlapping|CTG 0 - 214551186 214551186 0,0,0  1 126, 0,
chr1 214464885 214551467 PTPN14|NM_005401.5|non-overlapping|CTG 0 - 214464885 214464885 0,0,0  2 72,285, 0,86297,
chr1 214551485 214551512 PTPN14|NM_005401.5|non-overlapping|CTG 0 - 214551485 214551485 0,0,0  1 27, 0,
chr1 214551397 214551547 PTPN14|NM_005401.5|non-overlapping|TTG 0 - 214551397 214551397 0,0,0  1 150, 0,
chr1 214551441 214551627 PTPN14|NM_005401.5|non-overlapping|CTG 0 - 214551441 214551441 0,0,0  1 186, 0,
chr1 220272373 220272424 RAB3GAP2|NM_012414.4|non-overlapping|ATT 0 - 220272373 220272373 0,0,0  1 51, 0,
chr1 225924106 225924154 PYCR2|NM_013328.4|overlapping|CTG 0 - 225924106 225924106 0,0,0  1 48, 0,
chr1 225924150 225924240 PYCR2|NM_013328.4|non-overlapping|CTG 0 - 225924150 225924150 0,0,0  1 90, 0,
chr1 225924106 225924250 PYCR2|NM_013328.4|overlapping|ATC 0 - 225924106 225924106 0,0,0  1 144, 0,
chr1 229508151 229508295 NUP133|NM_018230.3|overlapping|CTG 0 - 229508151 229508151 0,0,0  1 144, 0,
chr1 229508074 229508302 NUP133|NM_018230.3|overlapping|CTG 0 - 229508074 229508074 0,0,0  1 228, 0,
chr1 230710824 230714104 AGT|NM_001384479.1|non-overlapping|CTG 0 - 230710824 230710824 0,0,0  2 29,19, 0,3261,
chr1 235494777 235504287 B3GALNT2|NM_152490.5|overlapping|ACG 0 - 235494777 235494777 0,0,0  2 51,147, 0,9363,
chr1 235494777 235504314 B3GALNT2|NM_152490.5|overlapping|TTG 0 - 235494777 235494777 0,0,0  2 51,174, 0,9363,
chr1 235494785 235504352 B3GALNT2|NM_152490.5|overlapping|GTG 0 - 235494785 235494785 0,0,0  2 43,212, 0,9355,
chr1 235833584 235833602 LYST|NM_000081.4|non-overlapping|ATG 0 - 235833584 235833584 0,0,0  1 18, 0,
chr1 235833609 235833618 LYST|NM_000081.4|non-overlapping|ATG 0 - 235833609 235833609 0,0,0  1 9, 0,
chr1 235830400 235833628 LYST|NM_000081.4|overlapping|ATG 0 - 235830400 235830400 0,0,0  2 24,51, 0,3177,
chr1 235833631 235833646 LYST|NM_000081.4|non-overlapping|ATT 0 - 235833631 235833631 0,0,0  1 15, 0,
chr1 235833650 235833659 LYST|NM_000081.4|non-overlapping|TTG 0 - 235833650 235833650 0,0,0  1 9, 0,
chr2   1693119   1744495 PXDN|NM_012293.3|overlapping|GTG 0 -   1693119   1693119 0,0,0  2 15,240, 0,51136,
chr2   3558256   3558286 RNASEH1|NM_002936.6|overlapping|ATG 0 -   3558256   3558256 0,0,0  1 30, 0,
chr2   3558325   3558343 RNASEH1|NM_002936.6|non-overlapping|ACG 0 -   3558325   3558325 0,0,0  1 18, 0,
chr2   9555601   9555643 ADAM17|NM_003183.6|overlapping|CTG 0 -   9555601   9555601 0,0,0  1 42, 0,
chr2   9555673   9555679 ADAM17|NM_003183.6|non-overlapping|ATG 0 -   9555673   9555673 0,0,0  1 6, 0,
chr2   9555739   9555763 ADAM17|NM_003183.6|non-overlapping|CTG 0 -   9555739   9555739 0,0,0  1 24, 0,
chr2   9555739   9555778 ADAM17|NM_003183.6|non-overlapping|CTG 0 -   9555739   9555739 0,0,0  1 39, 0,
chr2  19989999  19990062 WDR35|NM_001006657.2|overlapping|TTG 0 -  19989999  19989999 0,0,0  1 63, 0,
chr2  19990071  19990083 WDR35|NM_001006657.2|non-overlapping|TTG 0 -  19990071  19990071 0,0,0  1 12, 0,
chr2  24920068  24920134 ADCY3|NM_004036.5|non-overlapping|ATG 0 -  24920068  24920068 0,0,0  1 66, 0,
chr2  24919974  24920184 ADCY3|NM_004036.5|non-overlapping|ACG 0 -  24919974  24919974 0,0,0  1 210, 0,
chr2  24920068  24920191 ADCY3|NM_004036.5|non-overlapping|GTG 0 -  24920068  24920068 0,0,0  1 123, 0,
chr2  27380613  27380637 ZNF513|NM_144631.6|non-overlapping|ATG 0 -  27380613  27380613 0,0,0  1 24, 0,
chr2  27380613  27380724 ZNF513|NM_144631.6|non-overlapping|ATG 0 -  27380613  27380613 0,0,0  1 111, 0,
chr2  27489679  27489700 IFT172|NM_015662.3|non-overlapping|ACG 0 -  27489679  27489679 0,0,0  1 21, 0,
chr2  38076038  38076089 CYP1B1|NM_000104.4|non-overlapping|ATG 0 -  38076038  38076038 0,0,0  1 51, 0,
chr2  38075911  38076163 CYP1B1|NM_000104.4|non-overlapping|ATG 0 -  38075911  38075911 0,0,0  1 252, 0,
chr2  44359815  44359848 PREPL|NM_006036.4|non-overlapping|ATG 0 -  44359815  44359815 0,0,0  1 33, 0,
chr2  44359932  44359941 PREPL|NM_006036.4|non-overlapping|ATG 0 -  44359932  44359932 0,0,0  1 9, 0,
chr2  44359937  44359973 PREPL|NM_006036.4|non-overlapping|ATG 0 -  44359937  44359937 0,0,0  1 36, 0,
chr2  55419550  55419577 CCDC88A|NM_001135597.2|non-overlapping|ATG 0 -  55419550  55419550 0,0,0  1 27, 0,
chr2  55419739  55419751 CCDC88A|NM_001135597.2|non-overlapping|CTG 0 -  55419739  55419739 0,0,0  1 12, 0,
chr2  55419739  55419769 CCDC88A|NM_001135597.2|non-overlapping|CTG 0 -  55419739  55419739 0,0,0  1 30, 0,
chr2  69374095  69387100 GFPT1|NM_001244710.2|overlapping|CTG 0 -  69374095  69374095 0,0,0  2 18,36, 0,12969,
chr2  69374095  69387151 GFPT1|NM_001244710.2|overlapping|TTG 0 -  69374095  69374095 0,0,0  2 18,87, 0,12969,
chr2  69374013  69387222 GFPT1|NM_001244710.2|overlapping|CTG 0 -  69374013  69374013 0,0,0  2 100,158, 0,13051,
chr2  70248509  70248572 TIA1|NM_022173.4|non-overlapping|ATT 0 -  70248509  70248509 0,0,0  1 63, 0,
chr2  74464925  74465267 MOGS|NM_006302.3|overlapping|ACG 0 -  74464925  74464925 0,0,0  1 342, 0,
chr2  74464925  74465291 MOGS|NM_006302.3|overlapping|CTG 0 -  74464925  74464925 0,0,0  1 366, 0,
chr2  74465266  74465347 MOGS|NM_006302.3|non-overlapping|GTG 0 -  74465266  74465266 0,0,0  1 81, 0,
chr2  74465354  74465375 MOGS|NM_006302.3|non-overlapping|CTG 0 -  74465354  74465354 0,0,0  1 21, 0,
chr2  85560981  85561456 GGCX|NM_000821.7|overlapping|GTG 0 -  85560981  85560981 0,0,0  2 4,71, 0,404,
chr2  85561452  85561485 GGCX|NM_000821.7|non-overlapping|CTG 0 -  85561452  85561452 0,0,0  1 33, 0,
chr2  85888906  85888984 ST3GAL5|NM_003896.4|non-overlapping|ATG 0 -  85888906  85888906 0,0,0  1 78, 0,
chr2  88627273  88627300 EIF2AK3|NM_004836.7|non-overlapping|ATG 0 -  88627273  88627273 0,0,0  1 27, 0,
chr2  88627273  88627357 EIF2AK3|NM_004836.7|non-overlapping|TTG 0 -  88627273  88627273 0,0,0  1 84, 0,
chr2  88627273  88627363 EIF2AK3|NM_004836.7|non-overlapping|ACG 0 -  88627273  88627273 0,0,0  1 90, 0,
chr2  98608397  98608454 COA5|NM_001008215.3|overlapping|GTG 0 -  98608397  98608397 0,0,0  1 57, 0,
chr2  99117683  99117734 TSGA10|NM_182911.4|non-overlapping|ATG 0 -  99117683  99117683 0,0,0  1 51, 0,
chr2  99127145  99127160 TSGA10|NM_182911.4|non-overlapping|ATG 0 -  99127145  99127145 0,0,0  1 15, 0,
chr2 127106915 127106993 BIN1|NM_139343.3|overlapping|ATC 0 - 127106915 127106915 0,0,0  1 78, 0,
chr2 127294086 127294137 ERCC3|NM_000122.2|non-overlapping|ATG 0 - 127294086 127294086 0,0,0  1 51, 0,
chr2 135983417 135985518 DARS|NM_001349.4|overlapping|ACG 0 - 135983417 135983417 0,0,0  2 37,116, 0,1985,
chr2 147975954 148020628 ORC4|NM_002552.5|overlapping|ATG 0 - 147975954 147975954 0,0,0  2 21,21, 0,44653,
chr2 148020636 148020666 ORC4|NM_002552.5|non-overlapping|ATT 0 - 148020636 148020636 0,0,0  1 30, 0,
chr2 147935509 148020674 ORC4|NM_002552.5|CDS_extension|GTG 0 - 147935509 147935509 0,0,0 14 189,68,96,109,87,174,152,49,86,76,91,77,74,67, 0,2636,2788,3630,7926,12541,16863,19837,22788,23281,37229,37938,40392,85098,
chr2 148020670 148020679 ORC4|NM_002552.5|non-overlapping|ATT 0 - 148020670 148020670 0,0,0  1 9, 0,
chr2 148020670 148020709 ORC4|NM_002552.5|non-overlapping|GTG 0 - 148020670 148020670 0,0,0  1 39, 0,
chr2 149582260 149587125 MMADHC|NM_015702.3|overlapping|ATT 0 - 149582260 149582260 0,0,0  2 11,37, 0,4828,
chr2 149587666 149587714 MMADHC|NM_015702.3|non-overlapping|ATG 0 - 149587666 149587666 0,0,0  1 48, 0,
chr2 160200139 160200169 ITGB6|NM_000888.5|non-overlapping|ATG 0 - 160200139 160200139 0,0,0  1 30, 0,
chr2 160200215 160200230 ITGB6|NM_000888.5|non-overlapping|ATG 0 - 160200215 160200215 0,0,0  1 15, 0,
chr2 165770687 165770771 GALNT3|NM_004482.4|overlapping|ATG 0 - 165770687 165770687 0,0,0  1 84, 0,
chr2 165770767 165794126 GALNT3|NM_004482.4|non-overlapping|GTG 0 - 165770767 165770767 0,0,0  2 41,112, 0,23247,
chr2 165794074 165794251 GALNT3|NM_004482.4|non-overlapping|CTG 0 - 165794074 165794074 0,0,0  1 177, 0,
chr2 175995587 175995623 LNPK|NM_030650.3|non-overlapping|ATG 0 - 175995587 175995587 0,0,0  1 36, 0,
chr2 190310790 190319805 HIBCH|NM_014362.4|overlapping|CTG 0 - 190310790 190310790 0,0,0  2 6,90, 0,8925,
chr2 201768888 201768906 ALS2|NM_020919.4|non-overlapping|ATG 0 - 201768888 201768888 0,0,0  1 18, 0,
chr2 201768905 201768917 ALS2|NM_020919.4|non-overlapping|ATG 0 - 201768905 201768905 0,0,0  1 12, 0,
chr2 201768924 201780909 ALS2|NM_020919.4|non-overlapping|ATG 0 - 201768924 201768924 0,0,0  2 21,33, 0,11952,
chr2 206159480 206159495 NDUFS1|NM_005006.7|non-overlapping|ATG 0 - 206159480 206159480 0,0,0  1 15, 0,
chr2 231781077 231781179 PDE6D|NM_002601.4|overlapping|CTG 0 - 231781077 231781077 0,0,0  1 102, 0,
chr2 231781077 231781200 PDE6D|NM_002601.4|overlapping|CTG 0 - 231781077 231781077 0,0,0  1 123, 0,
chr2 232486693 232486738 ECEL1|NM_004826.4|non-overlapping|ATG 0 - 232486693 232486693 0,0,0  1 45, 0,
chr3  14145940  14178592 XPC|NM_004628.5|CDS_extension|GTG 0 -  14145940  14145940 0,0,0 16 219,90,94,170,135,82,161,882,90,121,158,85,124,113,196,127, 0,1349,1967,2621,2873,6394,10394,12070,13800,18872,19487,21228,22316,24497,26926,32525,
chr3  20186189  20186204 SGO1|NM_001199252.3|non-overlapping|ATG 0 -  20186189  20186189 0,0,0  1 15, 0,
chr3  20186096  20186102 SGO1|NM_001199252.3|non-overlapping|ATG 0 -  20186096  20186096 0,0,0  1 6, 0,
chr3  38024365  38024491 PLCD1|NM_001130964.2|overlapping|CTG 0 -  38024365  38024365 0,0,0  1 126, 0,
chr3  38024501  38024510 PLCD1|NM_001130964.2|non-overlapping|GTG 0 -  38024501  38024501 0,0,0  1 9, 0,
chr3  43081451  43081517 POMGNT2|NM_032806.6|non-overlapping|ATG 0 -  43081451  43081451 0,0,0  1 66, 0,
chr3  43081507  43105866 POMGNT2|NM_032806.6|non-overlapping|GTG 0 -  43081507  43081507 0,0,0  2 29,31, 0,24328,
chr3  43081507  43105974 POMGNT2|NM_032806.6|non-overlapping|CTG 0 -  43081507  43081507 0,0,0  2 29,139, 0,24328,
chr3  43081497  43106015 POMGNT2|NM_032806.6|non-overlapping|GTG 0 -  43081497  43081497 0,0,0  2 39,180, 0,24338,
chr3  43081497  43106021 POMGNT2|NM_032806.6|non-overlapping|CTG 0 -  43081497  43081497 0,0,0  2 39,186, 0,24338,
chr3  45984993  45985014 FYCO1|NM_024513.4|non-overlapping|ATG 0 -  45984993  45984993 0,0,0  1 21, 0,
chr3  45985003  45995804 FYCO1|NM_024513.4|non-overlapping|ATG 0 -  45985003  45985003 0,0,0  2 19,83, 0,10718,
chr3  49358259  49358322 GPX1|NM_000581.4|overlapping|GTG 0 -  49358259  49358259 0,0,0  1 63, 0,
chr3  49723634  49723775 GMPPB|NM_013334.4|overlapping|CTG 0 -  49723634  49723634 0,0,0  1 141, 0,
chr3  49723722  49723863 GMPPB|NM_013334.4|overlapping|GTG 0 -  49723722  49723722 0,0,0  1 141, 0,
chr3  49723831  49723897 GMPPB|NM_013334.4|non-overlapping|CTG 0 -  49723831  49723831 0,0,0  1 66, 0,
chr3  49723722  49723923 GMPPB|NM_013334.4|overlapping|GTG 0 -  49723722  49723722 0,0,0  1 201, 0,
chr3  49856493  49856499 TRAIP|NM_005879.3|non-overlapping|CTG 0 -  49856493  49856493 0,0,0  1 6, 0,
chr3  49856538  49856556 TRAIP|NM_005879.3|non-overlapping|CTG 0 -  49856538  49856538 0,0,0  1 18, 0,
chr3  50345631  50345721 ZMYND10|NM_015896.4|non-overlapping|ATG 0 -  50345631  50345631 0,0,0  1 90, 0,
chr3  52075886  52154411 POC1A|NM_015426.5|CDS_extension|ACG 0 -  52075886  52075886 0,0,0 11 99,144,99,69,134,116,108,180,172,85,57, 0,20682,46492,49226,62282,69959,71101,73323,73929,75129,78468,
chr3  53125978  53130414 RFT1|NM_052859.4|overlapping|CTG 0 -  53125978  53125978 0,0,0  2 16,77, 0,4359,
chr3  69012566  69012608 EOGT|NM_001278689.2|non-overlapping|ATG 0 -  69012566  69012566 0,0,0  1 42, 0,
chr3  69012566  69012704 EOGT|NM_001278689.2|non-overlapping|CTG 0 -  69012566  69012566 0,0,0  1 138, 0,
chr3  69012553  69012727 EOGT|NM_001278689.2|non-overlapping|CTG 0 -  69012553  69012553 0,0,0  1 174, 0,
chr3  69012728  69012743 EOGT|NM_001278689.2|non-overlapping|CTG 0 -  69012728  69012728 0,0,0  1 15, 0,
chr3  69012759  69013650 EOGT|NM_001278689.2|non-overlapping|ATG 0 -  69012759  69012759 0,0,0  2 40,77, 0,814,
chr3  93874244  93973854 PROS1|NM_000313.4|CDS_extension|ACG 0 -  93874244  93874244 0,0,0 15 161,226,152,169,168,190,116,122,126,132,123,87,25,158,181, 0,2721,4918,10483,12091,18688,22331,24203,26559,31539,31776,36374,49995,53005,99429,
chr3 108222373 108222400 IFT57|NM_018010.4|non-overlapping|CTG 0 - 108222373 108222373 0,0,0  1 27, 0,
chr3 108222373 108222409 IFT57|NM_018010.4|non-overlapping|GTG 0 - 108222373 108222373 0,0,0  1 36, 0,
chr3 121828913 121834406 IQCB1|NM_001023570.4|overlapping|GTG 0 - 121828913 121828913 0,0,0  2 59,16, 0,5477,
chr3 121834460 121835012 IQCB1|NM_001023570.4|non-overlapping|GTG 0 - 121834460 121834460 0,0,0  2 19,47, 0,505,
chr3 121835018 121835024 IQCB1|NM_001023570.4|non-overlapping|CTG 0 - 121835018 121835018 0,0,0  1 6, 0,
chr3 131502824 131502896 MRPL3|NM_007208.4|non-overlapping|GTG 0 - 131502824 131502824 0,0,0  1 72, 0,
chr3 131502824 131502902 MRPL3|NM_007208.4|non-overlapping|GTG 0 - 131502824 131502824 0,0,0  1 78, 0,
chr3 132722376 132722403 NPHP3|NM_153240.5|non-overlapping|CTG 0 - 132722376 132722376 0,0,0  1 27, 0,
chr3 138062815 138115546 DZIP1L|NM_173543.3|CDS_extension|CTG 0 - 138062815 138062815 0,0,0 16 162,140,170,217,193,134,54,31,141,63,129,162,122,85,582,219, 0,1812,4715,5335,8827,14683,17751,18918,21297,24145,25563,29567,32046,34947,40655,52512,
chr3 139389585 139389600 COPB2|NM_004766.3|non-overlapping|CTG 0 - 139389585 139389585 0,0,0  1 15, 0,
chr3 139389585 139389636 COPB2|NM_004766.3|non-overlapping|CTG 0 - 139389585 139389585 0,0,0  1 51, 0,
chr3 146124225 146161062 PLOD2|NM_182943.3|overlapping|CTG 0 - 146124225 146124225 0,0,0  2 4,182, 0,36655,
chr3 146124225 146161164 PLOD2|NM_182943.3|overlapping|ACG 0 - 146124225 146124225 0,0,0  2 4,284, 0,36655,
chr3 146124225 146161176 PLOD2|NM_182943.3|overlapping|GTG 0 - 146124225 146124225 0,0,0  2 4,296, 0,36655,
chr3 160399146 160399206 IFT80|NM_020800.3|non-overlapping|ATG 0 - 160399146 160399146 0,0,0  1 60, 0,
chr3 171460133 171460154 TNIK|NM_015028.4|non-overlapping|ATG 0 - 171460133 171460133 0,0,0  1 21, 0,
chr3 171460320 171460362 TNIK|NM_015028.4|non-overlapping|ATG 0 - 171460320 171460320 0,0,0  1 42, 0,
chr3 171460320 171460395 TNIK|NM_015028.4|non-overlapping|ATG 0 - 171460320 171460320 0,0,0  1 75, 0,
chr3 171738052 171810449 PLD1|NM_002662.5|non-overlapping|CTG 0 - 171738052 171738052 0,0,0  2 30,51, 0,72346,
chr3 171810445 171810469 PLD1|NM_002662.5|non-overlapping|GTG 0 - 171810445 171810445 0,0,0  1 24, 0,
chr3 180986999 180989630 DNAJC19|NM_145261.4|overlapping|GTG 0 - 180986999 180986999 0,0,0  4 23,74,52,31, 0,1023,1178,2600,
chr3 180986999 180989639 DNAJC19|NM_145261.4|overlapping|GTG 0 - 180986999 180986999 0,0,0  4 23,74,52,40, 0,1023,1178,2600,
chr3 180988213 180989646 DNAJC19|NM_145261.4|overlapping|ATG 0 - 180988213 180988213 0,0,0  2 16,47, 0,1386,
chr3 180989642 180989651 DNAJC19|NM_145261.4|non-overlapping|CTG 0 - 180989642 180989642 0,0,0  1 9, 0,
chr3 180989642 180989678 DNAJC19|NM_145261.4|non-overlapping|GTG 0 - 180989642 180989642 0,0,0  1 36, 0,
chr3 180989642 180989708 DNAJC19|NM_145261.4|non-overlapping|TTG 0 - 180989642 180989642 0,0,0  1 66, 0,
chr3 183015437 183099464 MCCC1|NM_020166.5|CDS_extension|ACG 0 - 183015437 183015437 0,0,0 19 129,72,108,138,50,87,217,110,184,128,82,112,122,148,122,96,137,47,113, 0,1828,4692,6979,10317,18553,21780,23588,26129,29975,36721,41873,55561,55772,56928,71255,76971,79121,83914,
chr3 183092442 183099474 MCCC1|NM_020166.5|overlapping|CTG 0 - 183092442 183092442 0,0,0  3 103,47,123, 0,2116,6909,
chr3 183015437 183099491 MCCC1|NM_020166.5|CDS_extension|ACG 0 - 183015437 183015437 0,0,0 19 129,72,108,138,50,87,217,110,184,128,82,112,122,148,122,96,137,47,140, 0,1828,4692,6979,10317,18553,21780,23588,26129,29975,36721,41873,55561,55772,56928,71255,76971,79121,83914,
chr3 183094576 183099517 MCCC1|NM_020166.5|overlapping|GTG 0 - 183094576 183094576 0,0,0  2 29,166, 0,4775,
chr3 185552500 185552542 LIPH|NM_139248.3|non-overlapping|GTG 0 - 185552500 185552500 0,0,0  1 42, 0,
chr3 187285933 187291678 MASP1|NM_139125.4|overlapping|CTG 0 - 187285933 187285933 0,0,0  2 123,51, 0,5694,
chr3 190120739 190120784 P3H2|NM_018192.4|non-overlapping|GTG 0 - 190120739 190120739 0,0,0  1 45, 0,
chr3 190120758 190120866 P3H2|NM_018192.4|non-overlapping|CTG 0 - 190120758 190120758 0,0,0  1 108, 0,
chr3 196077082 196077112 TFRC|NM_003234.4|overlapping|GTG 0 - 196077082 196077082 0,0,0  1 30, 0,
chr3 196082038 196082059 TFRC|NM_003234.4|non-overlapping|ACG 0 - 196082038 196082038 0,0,0  1 21, 0,
chr3 196082024 196082072 TFRC|NM_003234.4|non-overlapping|GTG 0 - 196082024 196082024 0,0,0  1 48, 0,
chr3 196082043 196082079 TFRC|NM_003234.4|non-overlapping|ATA 0 - 196082043 196082043 0,0,0  1 36, 0,
chr3 196283498 196287652 PCYT1A|NM_005017.4|non-overlapping|ATC 0 - 196283498 196283498 0,0,0  2 40,38, 0,4116,
chr3 196283498 196287670 PCYT1A|NM_005017.4|non-overlapping|ACG 0 - 196283498 196283498 0,0,0  2 40,56, 0,4116,
chr3 196291326 196318176 TCTEX1D2|NM_152773.5|CDS_extension|ACG 0 - 196291326 196291326 0,0,0  5 48,64,70,134,137, 0,4679,15616,24771,26713,
chr3 196318102 196318186 TCTEX1D2|NM_152773.5|overlapping|ATC 0 - 196318102 196318102 0,0,0  1 84, 0,
chr3 196291326 196318194 TCTEX1D2|NM_152773.5|CDS_extension|AGG 0 - 196291326 196291326 0,0,0  5 48,64,70,134,155, 0,4679,15616,24771,26713,
chr3 196318192 196318237 TCTEX1D2|NM_152773.5|non-overlapping|CTG 0 - 196318192 196318192 0,0,0  1 45, 0,
chr3 196503293 196503395 RNF168|NM_152617.4|non-overlapping|ATG 0 - 196503293 196503293 0,0,0  1 102, 0,
chr3 196503397 196503466 RNF168|NM_152617.4|non-overlapping|ATG 0 - 196503397 196503397 0,0,0  1 69, 0,
chr3 196503276 196503552 RNF168|NM_152617.4|non-overlapping|CTG 0 - 196503276 196503276 0,0,0  1 276, 0,
chr3 196503548 196503614 RNF168|NM_152617.4|non-overlapping|ATG 0 - 196503548 196503548 0,0,0  1 66, 0,
chr3 196503548 196503659 RNF168|NM_152617.4|non-overlapping|ACG 0 - 196503548 196503548 0,0,0  1 111, 0,
chr3 196503714 196503726 RNF168|NM_152617.4|non-overlapping|CTG 0 - 196503714 196503714 0,0,0  1 12, 0,
chr3 196503661 196503739 RNF168|NM_152617.4|non-overlapping|ACG 0 - 196503661 196503661 0,0,0  1 78, 0,
chr3 196503714 196503747 RNF168|NM_152617.4|non-overlapping|CTG 0 - 196503714 196503714 0,0,0  1 33, 0,
chr3 196503714 196503759 RNF168|NM_152617.4|non-overlapping|GTG 0 - 196503714 196503714 0,0,0  1 45, 0,
chr3 196708680 196711998 CEP19|NM_032898.5|non-overlapping|GTG 0 - 196708680 196708680 0,0,0  2 47,70, 0,3248,
chr3 196711970 196712081 CEP19|NM_032898.5|non-overlapping|CTG 0 - 196711970 196711970 0,0,0  1 111, 0,
chr3 196712022 196712139 CEP19|NM_032898.5|non-overlapping|GTG 0 - 196712022 196712022 0,0,0  1 117, 0,
chr3 196711970 196712210 CEP19|NM_032898.5|non-overlapping|CTG 0 - 196711970 196711970 0,0,0  1 240, 0,
chr3 196712131 196712242 CEP19|NM_032898.5|non-overlapping|GTG 0 - 196712131 196712131 0,0,0  1 111, 0,
chr4    826064    826100 CPLX1|NM_006651.4|non-overlapping|ATG 0 -    826064    826064 0,0,0  1 36, 0,
chr4  13484298  13484316 RAB28|NM_004249.4|non-overlapping|ATG 0 -  13484298  13484298 0,0,0  1 18, 0,
chr4  16076096  16084000 PROM1|NM_006017.3|non-overlapping|ATG 0 -  16076096  16076096 0,0,0  2 22,23, 0,7881,
chr4  17509299  17512068 QDPR|NM_000320.3|overlapping|CTG 0 -  17509299  17509299 0,0,0  2 64,119, 0,2650,
chr4  25160365  25160386 SEPSECS|NM_016955.4|overlapping|CTG 0 -  25160365  25160365 0,0,0  1 21, 0,
chr4  25160365  25160422 SEPSECS|NM_016955.4|overlapping|CTG 0 -  25160365  25160365 0,0,0  1 57, 0,
chr4  64409375  64409411 TECRL|NM_001010874.5|non-overlapping|AAG 0 -  64409375  64409375 0,0,0  1 36, 0,
chr4  64409375  64409417 TECRL|NM_001010874.5|non-overlapping|ATG 0 -  64409375  64409375 0,0,0  1 42, 0,
chr4  76213488  76213593 SCARB2|NM_005506.4|overlapping|TTG 0 -  76213488  76213488 0,0,0  1 105, 0,
chr4  76195838  76213688 SCARB2|NM_005506.4|overlapping|CTG 0 -  76195838  76195838 0,0,0  2 26,262, 0,17588,
chr4  76213488  76213845 SCARB2|NM_005506.4|overlapping|ACG 0 -  76213488  76213488 0,0,0  1 357, 0,
chr4  80072429  80072612 ANTXR2|NM_058172.6|overlapping|CTG 0 -  80072429  80072429 0,0,0  1 183, 0,
chr4  80071583  80072802 ANTXR2|NM_058172.6|overlapping|CTG 0 -  80071583  80071583 0,0,0  2 71,394, 0,825,
chr4  80072635  80072998 ANTXR2|NM_058172.6|non-overlapping|TTG 0 -  80072635  80072635 0,0,0  1 363, 0,
chr4  88523724  88523733 PIGY|NM_001042616.3|non-overlapping|CTG 0 -  88523724  88523724 0,0,0  1 9, 0,
chr4  99563567  99563579 TRMT10A|NM_152292.5|non-overlapping|ATC 0 -  99563567  99563567 0,0,0  1 12, 0,
chr4 102344756 102344852 SLC39A8|NM_022154.5|non-overlapping|ATG 0 - 102344756 102344756 0,0,0  1 96, 0,
chr4 102344779 102344992 SLC39A8|NM_022154.5|non-overlapping|ACG 0 - 102344779 102344779 0,0,0  1 213, 0,
chr4 102344756 102345023 SLC39A8|NM_022154.5|non-overlapping|ATG 0 - 102344756 102344756 0,0,0  1 267, 0,
chr4 102344779 102345076 SLC39A8|NM_022154.5|non-overlapping|ATG 0 - 102344779 102344779 0,0,0  1 297, 0,
chr4 102760722 102760938 MANBA|NM_005908.4|overlapping|CTG 0 - 102760722 102760722 0,0,0  1 216, 0,
chr4 106316029 106316050 TBCK|NM_001163435.3|non-overlapping|ATG 0 - 106316029 106316029 0,0,0  1 21, 0,
chr4 109766747 109802023 CFI|NM_000204.5|overlapping|CTG 0 - 109766747 109766747 0,0,0  2 77,109, 0,35167,
chr4 118352655 118352748 PRSS12|NM_003619.4|overlapping|ATG 0 - 118352655 118352655 0,0,0  1 93, 0,
chr4 118833695 118833710 SEC24D|NM_014822.4|non-overlapping|ATG 0 - 118833695 118833695 0,0,0  1 15, 0,
chr4 118833706 118833715 SEC24D|NM_014822.4|non-overlapping|ATG 0 - 118833706 118833706 0,0,0  1 9, 0,
chr4 118833695 118835958 SEC24D|NM_014822.4|non-overlapping|GTG 0 - 118833695 118833695 0,0,0  2 42,18, 0,2245,
chr4 118836071 118836086 SEC24D|NM_014822.4|non-overlapping|GTG 0 - 118836071 118836071 0,0,0  1 15, 0,
chr4 118836071 118836119 SEC24D|NM_014822.4|non-overlapping|GTG 0 - 118836071 118836071 0,0,0  1 48, 0,
chr4 120922637 120922673 PRDM5|NM_018699.4|non-overlapping|ATG 0 - 120922637 120922637 0,0,0  1 36, 0,
chr4 120922781 120922832 PRDM5|NM_018699.4|non-overlapping|ATG 0 - 120922781 120922781 0,0,0  1 51, 0,
chr4 121870331 121870355 BBS7|NM_176824.3|non-overlapping|CTG 0 - 121870331 121870331 0,0,0  1 24, 0,
chr4 121870318 121870426 BBS7|NM_176824.3|non-overlapping|CTG 0 - 121870318 121870318 0,0,0  1 108, 0,
chr4 127965144 127965192 MFSD8|NM_152778.3|non-overlapping|ATG 0 - 127965144 127965144 0,0,0  1 48, 0,
chr4 146521722 146521827 SLC10A7|NM_001300842.3|non-overlapping|ATG 0 - 146521722 146521722 0,0,0  1 105, 0,
chr4 146521781 146521844 SLC10A7|NM_001300842.3|non-overlapping|TTG 0 - 146521781 146521781 0,0,0  1 63, 0,
chr4 146521840 146521918 SLC10A7|NM_001300842.3|non-overlapping|CTG 0 - 146521840 146521840 0,0,0  1 78, 0,
chr4 151014649 151014676 LRBA|NM_006726.4|non-overlapping|GTG 0 - 151014649 151014649 0,0,0  1 27, 0,
chr4 151014644 151014749 LRBA|NM_006726.4|non-overlapping|TTG 0 - 151014644 151014644 0,0,0  1 105, 0,
chr4 151014644 151014767 LRBA|NM_006726.4|non-overlapping|TTG 0 - 151014644 151014644 0,0,0  1 123, 0,
chr4 151014672 151014828 LRBA|NM_006726.4|non-overlapping|ATT 0 - 151014672 151014672 0,0,0  1 156, 0,
chr4 151014672 151014852 LRBA|NM_006726.4|non-overlapping|TTG 0 - 151014672 151014672 0,0,0  1 180, 0,
chr4 177442265 177442421 AGA|NM_000027.4|overlapping|CTG 0 - 177442265 177442265 0,0,0  1 156, 0,
chr5  37247711  37247735 CPLANE1|NM_023073.4|non-overlapping|CTG 0 -  37247711  37247711 0,0,0  1 24, 0,
chr5  37247711  37249270 CPLANE1|NM_023073.4|non-overlapping|CTG 0 -  37247711  37247711 0,0,0  2 34,26, 0,1533,
chr5  37249285  37249321 CPLANE1|NM_023073.4|non-overlapping|CTG 0 -  37249285  37249285 0,0,0  1 36, 0,
chr5  37371011  37371044 NUP155|NM_004298.4|non-overlapping|TTG 0 -  37371011  37371011 0,0,0  1 33, 0,
chr5  60928935  60945048 ERCC8|NM_000082.4|overlapping|ATG 0 -  60928935  60928935 0,0,0  2 24,117, 0,15996,
chr5  78294565  78294640 AP3B1|NM_003664.5|overlapping|CTG 0 -  78294565  78294565 0,0,0  1 75, 0,
chr5  78985082  78985310 ARSB|NM_198709.3|overlapping|ATT 0 -  78985082  78985082 0,0,0  1 228, 0,
chr5  95550583  95550643 TTC37|NM_014639.4|non-overlapping|ATG 0 -  95550583  95550583 0,0,0  1 60, 0,
chr5 131165194 131165266 HINT1|NM_005340.7|overlapping|CTG 0 - 131165194 131165194 0,0,0  1 72, 0,
chr5 134632088 134632749 SAR1B|NM_001033503.3|non-overlapping|ATT 0 - 134632088 134632088 0,0,0  2 107,22, 0,639,
chr5 139127845 139198284 SIL1|NM_022464.5|non-overlapping|CTG 0 - 139127845 139127845 0,0,0  2 8,16, 0,70423,
chr5 139127845 139198299 SIL1|NM_022464.5|non-overlapping|GTG 0 - 139127845 139127845 0,0,0  2 8,31, 0,70423,
chr5 139127845 139198308 SIL1|NM_022464.5|non-overlapping|GTG 0 - 139127845 139127845 0,0,0  2 8,40, 0,70423,
chr5 146177631 146182588 LARS|NM_020117.11|overlapping|CTG 0 - 146177631 146177631 0,0,0  2 34,101, 0,4856,
chr5 146182601 146182637 LARS|NM_020117.11|non-overlapping|ATG 0 - 146182601 146182601 0,0,0  1 36, 0,
chr5 151674654 151686894 SPARC|NM_003118.4|overlapping|CTG 0 - 151674654 151674654 0,0,0  3 20,70,30, 0,1477,12210,
chr5 151674654 151686912 SPARC|NM_003118.4|overlapping|CTG 0 - 151674654 151674654 0,0,0  3 20,70,48, 0,1477,12210,
chr5 172454321 172454408 SH3PXD2B|NM_001017995.3|overlapping|CTG 0 - 172454321 172454321 0,0,0  1 87, 0,
chr5 172454321 172454465 SH3PXD2B|NM_001017995.3|overlapping|CTG 0 - 172454321 172454321 0,0,0  1 144, 0,
chr5 178153879 178153894 NHP2|NM_017838.4|non-overlapping|ATG 0 - 178153879 178153879 0,0,0  1 15, 0,
chr5 178153835 178153880 NHP2|NM_017838.4|non-overlapping|ATG 0 - 178153835 178153835 0,0,0  1 45, 0,
chr5 179343807 179345402 ADAMTS2|NM_014244.5|overlapping|ATG 0 - 179343807 179343807 0,0,0  2 354,213, 0,1382,
chr6   5216693   5260806 LYRM4|NM_020408.6|overlapping|CTG 0 -   5216693   5216693 0,0,0  2 45,159, 0,43954,
chr6   5216693   5260836 LYRM4|NM_020408.6|overlapping|ATT 0 -   5216693   5216693 0,0,0  2 45,189, 0,43954,
chr6   5216693   5260857 LYRM4|NM_020408.6|overlapping|CTG 0 -   5216693   5216693 0,0,0  2 45,210, 0,43954,
chr6   5260873   5260885 LYRM4|NM_020408.6|non-overlapping|CTG 0 -   5260873   5260873 0,0,0  1 12, 0,
chr6  15662838  15662898 DTNBP1|NM_032122.5|overlapping|CTG 0 -  15662838  15662838 0,0,0  1 60, 0,
chr6  15662894  15662939 DTNBP1|NM_032122.5|non-overlapping|GTG 0 -  15662894  15662894 0,0,0  1 45, 0,
chr6  18155037  18155058 TPMT|NM_000367.5|non-overlapping|ATG 0 -  18155037  18155037 0,0,0  1 21, 0,
chr6  31795219  31795580 VARS|NM_006295.3|non-overlapping|GTG 0 -  31795219  31795219 0,0,0  2 31,35, 0,326,
chr6  31795581  31795647 VARS|NM_006295.3|non-overlapping|CTG 0 -  31795581  31795581 0,0,0  1 66, 0,
chr6  31795581  31795668 VARS|NM_006295.3|non-overlapping|CTG 0 -  31795581  31795581 0,0,0  1 87, 0,
chr6  33314037  33314064 TAPBP|NM_003190.5|overlapping|ATG 0 -  33314037  33314037 0,0,0  1 27, 0,
chr6  43052720  43053770 CUL7|NM_014780.5|overlapping|CTG 0 -  43052720  43052720 0,0,0  2 76,149, 0,901,
chr6  49459452  49459476 MMUT|NM_000255.4|overlapping|ATG 0 -  49459452  49459452 0,0,0  1 24, 0,
chr6  49463163  49463178 MMUT|NM_000255.4|non-overlapping|ATG 0 -  49463163  49463163 0,0,0  1 15, 0,
chr6  53544496  53544721 GCLC|NM_001498.4|overlapping|CTG 0 -  53544496  53544496 0,0,0  1 225, 0,
chr6  53544614  53544776 GCLC|NM_001498.4|overlapping|CTG 0 -  53544614  53544614 0,0,0  1 162, 0,
chr6  53544717  53544834 GCLC|NM_001498.4|non-overlapping|CTG 0 -  53544717  53544717 0,0,0  1 117, 0,
chr6  53544496  53544859 GCLC|NM_001498.4|overlapping|GTG 0 -  53544496  53544496 0,0,0  1 363, 0,
chr6  53544614  53544878 GCLC|NM_001498.4|overlapping|CTG 0 -  53544614  53544614 0,0,0  1 264, 0,
chr6  53544496  53545021 GCLC|NM_001498.4|overlapping|GTG 0 -  53544496  53544496 0,0,0  1 525, 0,
chr6  53545031  53545067 GCLC|NM_001498.4|non-overlapping|ATG 0 -  53545031  53545031 0,0,0  1 36, 0,
chr6  57210417  57210429 RAB23|NM_183227.3|non-overlapping|CTG 0 -  57210417  57210417 0,0,0  1 12, 0,
chr6  81752449  81752605 TENT5A|NM_017633.3|non-overlapping|GTG 0 -  81752449  81752449 0,0,0  1 156, 0,
chr6  81752449  81752650 TENT5A|NM_017633.3|non-overlapping|GTG 0 -  81752449  81752449 0,0,0  1 201, 0,
chr6  81752449  81752656 TENT5A|NM_017633.3|non-overlapping|ACG 0 -  81752449  81752449 0,0,0  1 207, 0,
chr6  83193183  83193201 PGM3|NM_001199919.2|non-overlapping|GTG 0 -  83193183  83193183 0,0,0  1 18, 0,
chr6  83193197  83193233 PGM3|NM_001199919.2|non-overlapping|TTG 0 -  83193197  83193197 0,0,0  1 36, 0,
chr6  83193197  83193236 PGM3|NM_001199919.2|non-overlapping|ACG 0 -  83193197  83193197 0,0,0  1 39, 0,
chr6  83193201  83193246 PGM3|NM_001199919.2|non-overlapping|TTG 0 -  83193201  83193201 0,0,0  1 45, 0,
chr6  85593681  85593768 SNX14|NM_153816.6|overlapping|TTG 0 -  85593681  85593681 0,0,0  1 87, 0,
chr6  85593745  85593781 SNX14|NM_153816.6|non-overlapping|ATG 0 -  85593745  85593745 0,0,0  1 36, 0,
chr6  85593681  85593852 SNX14|NM_153816.6|overlapping|CTG 0 -  85593681  85593681 0,0,0  1 171, 0,
chr6  96897788  96897809 NDUFAF4|NM_014165.4|overlapping|ATG 0 -  96897788  96897788 0,0,0  1 21, 0,
chr6  96897805  96897814 NDUFAF4|NM_014165.4|non-overlapping|ATG 0 -  96897805  96897805 0,0,0  1 9, 0,
chr6  96897813  96897825 NDUFAF4|NM_014165.4|non-overlapping|CTG 0 -  96897813  96897813 0,0,0  1 12, 0,
chr6 104859708 104859714 HACE1|NM_020771.4|non-overlapping|ATG 0 - 104859708 104859708 0,0,0  1 6, 0,
chr6 104852367 104859733 HACE1|NM_020771.4|overlapping|CTG 0 - 104852367 104852367 0,0,0  2 4,167, 0,7199,
chr6 104859759 104859768 HACE1|NM_020771.4|non-overlapping|GTG 0 - 104859759 104859759 0,0,0  1 9, 0,
chr6 104859608 104859797 HACE1|NM_020771.4|overlapping|ACG 0 - 104859608 104859608 0,0,0  1 189, 0,
chr6 106316197 106316233 ATG5|NM_004849.4|overlapping|ATG 0 - 106316197 106316197 0,0,0  1 36, 0,
chr6 106325536 106325581 ATG5|NM_004849.4|non-overlapping|CTG 0 - 106325536 106325536 0,0,0  1 45, 0,
chr6 106325526 106325661 ATG5|NM_004849.4|non-overlapping|CTG 0 - 106325526 106325526 0,0,0  1 135, 0,
chr6 106325536 106325740 ATG5|NM_004849.4|non-overlapping|CTG 0 - 106325536 106325536 0,0,0  1 204, 0,
chr6 106629203 106629263 RTN4IP1|NM_032730.5|non-overlapping|ATG 0 - 106629203 106629203 0,0,0  1 60, 0,
chr6 107334317 107459325 PDSS2|NM_020381.4|overlapping|CTG 0 - 107334317 107334317 0,0,0  2 15,336, 0,124672,
chr6 107459372 107459390 PDSS2|NM_020381.4|non-overlapping|ATT 0 - 107459372 107459372 0,0,0  1 18, 0,
chr6 107334317 107459403 PDSS2|NM_020381.4|overlapping|CTG 0 - 107334317 107334317 0,0,0  2 15,414, 0,124672,
chr6 107334317 107459433 PDSS2|NM_020381.4|overlapping|CTG 0 - 107334317 107334317 0,0,0  2 15,444, 0,124672,
chr6 107459281 107459467 PDSS2|NM_020381.4|overlapping|CTG 0 - 107459281 107459281 0,0,0  1 186, 0,
chr6 107459399 107459489 PDSS2|NM_020381.4|non-overlapping|CTG 0 - 107459399 107459399 0,0,0  1 90, 0,
chr6 107459535 107459553 PDSS2|NM_020381.4|non-overlapping|ATG 0 - 107459535 107459535 0,0,0  1 18, 0,
chr6 109482048 109483121 ZBTB24|NM_014797.3|non-overlapping|GTG 0 - 109482048 109482048 0,0,0  2 6,24, 0,1049,
chr6 109482041 109483180 ZBTB24|NM_014797.3|non-overlapping|GTG 0 - 109482041 109482041 0,0,0  2 13,83, 0,1056,
chr6 111592087 111605849 TRAF3IP2|NM_147686.4|non-overlapping|GTG 0 - 111592087 111592087 0,0,0  2 7,74, 0,13688,
chr6 111606010 111606049 TRAF3IP2|NM_147686.4|non-overlapping|ATG 0 - 111606010 111606010 0,0,0  1 39, 0,
chr6 111606160 111606178 TRAF3IP2|NM_147686.4|non-overlapping|ATG 0 - 111606160 111606160 0,0,0  1 18, 0,
chr6 116279826 116279850 TSPYL1|NM_003309.4|overlapping|TTG 0 - 116279826 116279826 0,0,0  1 24, 0,
chr6 116279826 116279856 TSPYL1|NM_003309.4|overlapping|CTG 0 - 116279826 116279826 0,0,0  1 30, 0,
chr6 116279826 116279868 TSPYL1|NM_003309.4|overlapping|ACG 0 - 116279826 116279826 0,0,0  1 42, 0,
chr6 116279826 116279877 TSPYL1|NM_003309.4|overlapping|CTG 0 - 116279826 116279826 0,0,0  1 51, 0,
chr6 118934898 118934982 MCM9|NM_017696.3|non-overlapping|TTG 0 - 118934898 118934898 0,0,0  1 84, 0,
chr6 118932704 118935070 MCM9|NM_017696.3|non-overlapping|AGG 0 - 118932704 118932704 0,0,0  2 36,180, 0,2186,
chr6 123636767 123636818 TRDN|NM_001256020.2|overlapping|TTG 0 - 123636767 123636767 0,0,0  1 51, 0,
chr6 123636783 123636825 TRDN|NM_001256020.2|non-overlapping|GTG 0 - 123636783 123636783 0,0,0  1 42, 0,
chr6 123636783 123636894 TRDN|NM_001256020.2|non-overlapping|ACG 0 - 123636783 123636783 0,0,0  1 111, 0,
chr6 131628057 131628075 MED23|NM_015979.4|non-overlapping|CTG 0 - 131628057 131628057 0,0,0  1 18, 0,
chr6 131628057 131628087 MED23|NM_015979.4|non-overlapping|TTG 0 - 131628057 131628057 0,0,0  1 30, 0,
chr6 131628057 131628099 MED23|NM_015979.4|non-overlapping|CTG 0 - 131628057 131628057 0,0,0  1 42, 0,
chr6 131628095 131628182 MED23|NM_015979.4|non-overlapping|CTG 0 - 131628095 131628095 0,0,0  1 87, 0,
chr6 135490726 135492275 AHI1|NM_017651.5|overlapping|ATG 0 - 135490726 135490726 0,0,0  2 21,48, 0,1501,
chr6 135490726 135497201 AHI1|NM_017651.5|overlapping|ATG 0 - 135490726 135490726 0,0,0  3 21,64,14, 0,1501,6461,
chr6 135490726 135497240 AHI1|NM_017651.5|overlapping|CTG 0 - 135490726 135490726 0,0,0  3 21,64,53, 0,1501,6461,
chr6 135497230 135497644 AHI1|NM_017651.5|non-overlapping|TTG 0 - 135497230 135497230 0,0,0  2 19,62, 0,352,
chr6 135497230 135497653 AHI1|NM_017651.5|non-overlapping|CTG 0 - 135497230 135497230 0,0,0  2 19,71, 0,352,
chr6 135497654 135497714 AHI1|NM_017651.5|non-overlapping|ACG 0 - 135497654 135497654 0,0,0  1 60, 0,
chr6 138987782 138987824 REPS1|NM_001286611.2|non-overlapping|CTG 0 - 138987782 138987782 0,0,0  1 42, 0,
chr6 138987811 138988117 REPS1|NM_001286611.2|non-overlapping|CTG 0 - 138987811 138987811 0,0,0  1 306, 0,
chr6 138988147 138988207 REPS1|NM_001286611.2|non-overlapping|ATG 0 - 138988147 138988147 0,0,0  1 60, 0,
chr6 151445710 151452047 RMND1|NM_017909.4|overlapping|CTG 0 - 151445710 151445710 0,0,0  2 115,32, 0,6305,
chr6 151452103 151452121 RMND1|NM_017909.4|non-overlapping|ATG 0 - 151452103 151452103 0,0,0  1 18, 0,
chr6 158168155 158168188 SERAC1|NM_032861.4|non-overlapping|ACG 0 - 158168155 158168155 0,0,0  1 33, 0,
chr6 158999530 158999599 RSPH3|NM_031924.8|overlapping|CTG 0 - 158999530 158999530 0,0,0  1 69, 0,
chr6 158999530 158999647 RSPH3|NM_031924.8|overlapping|TTG 0 - 158999530 158999530 0,0,0  1 117, 0,
chr6 158999606 158999714 RSPH3|NM_031924.8|non-overlapping|CTG 0 - 158999606 158999606 0,0,0  1 108, 0,
chr6 158999972 159000026 RSPH3|NM_031924.8|non-overlapping|ATT 0 - 158999972 158999972 0,0,0  1 54, 0,
chr6 158999972 159000056 RSPH3|NM_031924.8|non-overlapping|ATG 0 - 158999972 158999972 0,0,0  1 84, 0,
chr6 158999707 159000088 RSPH3|NM_031924.8|non-overlapping|CTG 0 - 158999707 158999707 0,0,0  1 381, 0,
chr6 158977537 159000168 RSPH3|NM_031924.8|CDS_extension|CTG 0 - 158977537 158977537 0,0,0  8 311,87,163,204,146,142,88,734, 0,722,3236,4947,6124,8742,16301,21897,
chr6 166366838 166382925 MPC1|NM_016098.4|overlapping|AAG 0 - 166366838 166366838 0,0,0  3 53,4,120, 0,3379,15967,
chr6 166956349 166956358 RNASET2|NM_003730.6|non-overlapping|CTG 0 - 166956349 166956349 0,0,0  1 9, 0,
chr6 166952545 166956438 RNASET2|NM_003730.6|overlapping|CTG 0 - 166952545 166952545 0,0,0  2 3,342, 0,3551,
chr6 166956434 166956461 RNASET2|NM_003730.6|non-overlapping|ACG 0 - 166956434 166956434 0,0,0  1 27, 0,
chr6 166956434 166956485 RNASET2|NM_003730.6|non-overlapping|GTG 0 - 166956434 166956434 0,0,0  1 51, 0,
chr6 166956349 166956496 RNASET2|NM_003730.6|non-overlapping|CTG 0 - 166956349 166956349 0,0,0  1 147, 0,
chr6 166956434 166956527 RNASET2|NM_003730.6|non-overlapping|GTG 0 - 166956434 166956434 0,0,0  1 93, 0,
chr6 166956434 166956533 RNASET2|NM_003730.6|non-overlapping|GTG 0 - 166956434 166956434 0,0,0  1 99, 0,
chr7   5781559   5781571 RNF216|NM_207111.4|non-overlapping|CTG 0 -   5781559   5781559 0,0,0  1 12, 0,
chr7   5781543   5781609 RNF216|NM_207111.4|non-overlapping|CTG 0 -   5781543   5781543 0,0,0  1 66, 0,
chr7   5781543   5781618 RNF216|NM_207111.4|non-overlapping|CTG 0 -   5781543   5781543 0,0,0  1 75, 0,
chr7  22991126  23013953 FAM126A|NM_032581.4|non-overlapping|CTG 0 -  22991126  22991126 0,0,0  2 13,29, 0,22798,
chr7  23014039  23014066 FAM126A|NM_032581.4|non-overlapping|ATG 0 -  23014039  23014039 0,0,0  1 27, 0,
chr7  30026533  30026566 FKBP14|NM_017946.4|non-overlapping|ATG 0 -  30026533  30026533 0,0,0  1 33, 0,
chr7  30026583  30026619 FKBP14|NM_017946.4|non-overlapping|CTG 0 -  30026583  30026583 0,0,0  1 36, 0,
chr7  30026631  30026649 FKBP14|NM_017946.4|non-overlapping|ATG 0 -  30026631  30026631 0,0,0  1 18, 0,
chr7  40133141  40134602 MPLKIP|NM_138701.4|overlapping|ACG 0 -  40133141  40133141 0,0,0  2 118,374, 0,1087,
chr7  56021190  56031962 PSPH|NM_004577.4|overlapping|GTG 0 -  56021190  56021190 0,0,0  2 41,34, 0,10738,
chr7  56031948  56031993 PSPH|NM_004577.4|non-overlapping|CTG 0 -  56031948  56031948 0,0,0  1 45, 0,
chr7  56032006  56032012 PSPH|NM_004577.4|non-overlapping|CTG 0 -  56032006  56032006 0,0,0  1 6, 0,
chr7  56031948  56034076 PSPH|NM_004577.4|non-overlapping|CTG 0 -  56031948  56031948 0,0,0  2 106,116, 0,2012,
chr7  56051336  56051357 PSPH|NM_004577.4|non-overlapping|ATG 0 -  56051336  56051336 0,0,0  1 21, 0,
chr7  56051343  56051382 PSPH|NM_004577.4|non-overlapping|CTG 0 -  56051343  56051343 0,0,0  1 39, 0,
chr7  56051343  56051400 PSPH|NM_004577.4|non-overlapping|GTG 0 -  56051343  56051343 0,0,0  1 57, 0,
chr7  56051405  56051414 PSPH|NM_004577.4|non-overlapping|GTG 0 -  56051405  56051405 0,0,0  1 9, 0,
chr7  66995562  66995577 SBDS|NM_016038.4|non-overlapping|GTG 0 -  66995562  66995562 0,0,0  1 15, 0,
chr7  92833453  92833489 CDK6|NM_001259.8|non-overlapping|CTG 0 -  92833453  92833453 0,0,0  1 36, 0,
chr7  92833644  92833650 CDK6|NM_001259.8|non-overlapping|ATG 0 -  92833644  92833644 0,0,0  1 6, 0,
chr7  96296941  96321991 SLC25A13|NM_014251.3|overlapping|GTG 0 -  96296941  96296941 0,0,0  2 10,50, 0,25000,
chr7  96296941  96322009 SLC25A13|NM_014251.3|overlapping|ACG 0 -  96296941  96296941 0,0,0  2 10,68, 0,25000,
chr7  96296919  96322029 SLC25A13|NM_014251.3|overlapping|GTG 0 -  96296919  96296919 0,0,0  2 32,88, 0,25022,
chr7  97869168  97869796 ASNS|NM_133436.3|non-overlapping|CTG 0 -  97869168  97869168 0,0,0  2 11,19, 0,609,
chr7 100119324 100119345 TAF6|NM_005641.4|non-overlapping|ATG 0 - 100119324 100119324 0,0,0  1 21, 0,
chr7 100158560 100158575 MAP11|NM_018275.5|non-overlapping|CTG 0 - 100158560 100158560 0,0,0  1 15, 0,
chr7 100157755 100158588 MAP11|NM_018275.5|overlapping|GTG 0 - 100157755 100157755 0,0,0  3 7,96,500, 0,87,333,
chr7 101216752 101217338 PLOD3|NM_001084.5|overlapping|CTG 0 - 101216752 101216752 0,0,0  2 34,173, 0,413,
chr7 101217411 101217477 PLOD3|NM_001084.5|non-overlapping|TTG 0 - 101217411 101217411 0,0,0  1 66, 0,
chr7 105508514 105522102 PUS7|NM_019042.5|non-overlapping|CTG 0 - 105508514 105508514 0,0,0  2 30,51, 0,13537,
chr7 105508534 105522152 PUS7|NM_019042.5|non-overlapping|CTG 0 - 105508534 105508534 0,0,0  2 10,101, 0,13517,
chr7 105508514 105522168 PUS7|NM_019042.5|non-overlapping|CTG 0 - 105508514 105508514 0,0,0  2 30,117, 0,13537,
chr7 108515545 108515566 PNPLA8|NM_015723.5|non-overlapping|ATG 0 - 108515545 108515545 0,0,0  1 21, 0,
chr7 108521485 108521497 PNPLA8|NM_015723.5|non-overlapping|ATG 0 - 108521485 108521485 0,0,0  1 12, 0,
chr7 108518213 108526110 PNPLA8|NM_015723.5|non-overlapping|ATG 0 - 108518213 108518213 0,0,0  3 88,46,82, 0,3262,7815,
chr7 122133709 122144221 AASS|NM_005763.4|overlapping|CTG 0 - 122133709 122133709 0,0,0  2 32,61, 0,10451,
chr7 128343780 128343846 RBM28|NM_018077.3|overlapping|GTG 0 - 128343780 128343780 0,0,0  1 66, 0,
chr7 130440934 130440985 CEP41|NM_018718.3|overlapping|GTG 0 - 130440934 130440934 0,0,0  1 51, 0,
chr7 144835608 144835989 TPK1|NM_022445.4|non-overlapping|CTG 0 - 144835608 144835608 0,0,0  2 10,23, 0,358,
chr7 152660748 152676132 XRCC2|NM_005431.2|overlapping|ATG 0 - 152660748 152660748 0,0,0  2 34,92, 0,15292,
chr8  18084030  18084093 ASAH1|NM_177924.5|overlapping|CTG 0 -  18084030  18084030 0,0,0  1 63, 0,
chr8  18084030  18084102 ASAH1|NM_177924.5|overlapping|TTG 0 -  18084030  18084030 0,0,0  1 72, 0,
chr8  23068943  23068961 TNFRSF10B|NM_147187.3|non-overlapping|ATG 0 -  23068943  23068943 0,0,0  1 18, 0,
chr8  23068911  23069010 TNFRSF10B|NM_147187.3|non-overlapping|ACG 0 -  23068911  23068911 0,0,0  1 99, 0,
chr8  30653509  30658077 GTF2E2|NM_002095.6|overlapping|CTG 0 -  30653509  30653509 0,0,0  2 93,105, 0,4463,
chr8  30653579  30658120 GTF2E2|NM_002095.6|overlapping|CTG 0 -  30653579  30653579 0,0,0  2 23,148, 0,4393,
chr8  30658073  30658133 GTF2E2|NM_002095.6|non-overlapping|GTG 0 -  30658073  30658073 0,0,0  1 60, 0,
chr8  30653509  30658209 GTF2E2|NM_002095.6|overlapping|GTG 0 -  30653509  30653509 0,0,0  2 93,237, 0,4463,
chr8  56993688  56993727 IMPAD1|NM_017813.5|non-overlapping|ATG 0 -  56993688  56993688 0,0,0  1 39, 0,
chr8  56993688  56993769 IMPAD1|NM_017813.5|non-overlapping|GTG 0 -  56993688  56993688 0,0,0  1 81, 0,
chr8  56993688  56993772 IMPAD1|NM_017813.5|non-overlapping|TTG 0 -  56993688  56993688 0,0,0  1 84, 0,
chr8  56993688  56993799 IMPAD1|NM_017813.5|non-overlapping|CTG 0 -  56993688  56993688 0,0,0  1 111, 0,
chr8  56993341  56993803 IMPAD1|NM_017813.5|overlapping|CTG 0 -  56993341  56993341 0,0,0  1 462, 0,
chr8  56993726  56993846 IMPAD1|NM_017813.5|non-overlapping|GTG 0 -  56993726  56993726 0,0,0  1 120, 0,
chr8  60281134  60281185 CA8|NM_004056.6|overlapping|CTG 0 -  60281134  60281134 0,0,0  1 51, 0,
chr8  60281134  60281311 CA8|NM_004056.6|overlapping|TTG 0 -  60281134  60281134 0,0,0  1 177, 0,
chr8  60281134  60281341 CA8|NM_004056.6|overlapping|CTG 0 -  60281134  60281134 0,0,0  1 207, 0,
chr8  61714412  61714433 ASPH|NM_004318.4|non-overlapping|GTG 0 -  61714412  61714412 0,0,0  1 21, 0,
chr8  61714357  61714513 ASPH|NM_004318.4|overlapping|CTG 0 -  61714357  61714357 0,0,0  1 156, 0,
chr8  61714357  61714525 ASPH|NM_004318.4|overlapping|CTG 0 -  61714357  61714357 0,0,0  1 168, 0,
chr8  76984107  76986284 PEX2|NM_000318.3|overlapping|ATG 0 -  76984107  76984107 0,0,0  2 88,98, 0,2079,
chr8  76988307  77000039 PEX2|NM_000318.3|non-overlapping|ATG 0 -  76988307  76988307 0,0,0  2 31,50, 0,11682,
chr8  89982824  89984577 NBN|NM_002485.5|overlapping|CTG 0 -  89982824  89982824 0,0,0  2 31,53, 0,1700,
chr8  89984613  89984649 NBN|NM_002485.5|non-overlapping|ATG 0 -  89984613  89984613 0,0,0  1 36, 0,
chr8 102238990 102239047 RRM2B|NM_015713.5|non-overlapping|ATG 0 - 102238990 102238990 0,0,0  1 57, 0,
chr8 102232270 102238924 RRM2B|NM_015713.5|overlapping|CTG 0 - 102232270 102232270 0,0,0  2 34,98, 0,6556,
chr8 102238920 102238929 RRM2B|NM_015713.5|non-overlapping|GTG 0 - 102238920 102238920 0,0,0  1 9, 0,
chr8 102232270 102238951 RRM2B|NM_015713.5|overlapping|CTG 0 - 102232270 102232270 0,0,0  2 34,125, 0,6556,
chr8 119832554 119832617 TAF2|NM_003184.4|overlapping|ATG 0 - 119832554 119832554 0,0,0  1 63, 0,
chr8 119731923 119832669 TAF2|NM_003184.4|CDS_extension|GTG 0 - 119731923 119731923 0,0,0 26 263,123,106,230,110,70,140,194,111,141,253,66,110,115,155,136,86,100,114,185,232,142,119,161,55,188, 0,10610,12364,14781,24082,26149,28675,30491,46095,49129,51457,53277,56414,56866,57668,59400,61442,63608,65066,65738,69870,71954,74359,87422,99753,100558,
chr8 119832774 119832798 TAF2|NM_003184.4|non-overlapping|TTG 0 - 119832774 119832774 0,0,0  1 24, 0,
chr8 119832774 119832825 TAF2|NM_003184.4|non-overlapping|ATG 0 - 119832774 119832774 0,0,0  1 51, 0,
chr8 133297133 133297181 NDRG1|NM_006096.4|non-overlapping|CTG 0 - 133297133 133297133 0,0,0  1 48, 0,
chr8 133284321 133297206 NDRG1|NM_006096.4|non-overlapping|ATC 0 - 133284321 133284321 0,0,0  2 8,73, 0,12812,
chr8 133297133 133297226 NDRG1|NM_006096.4|non-overlapping|CTG 0 - 133297133 133297133 0,0,0  1 93, 0,
chr8 133297133 133297232 NDRG1|NM_006096.4|non-overlapping|CTG 0 - 133297133 133297133 0,0,0  1 99, 0,
chr8 133297222 133297243 NDRG1|NM_006096.4|non-overlapping|CTG 0 - 133297222 133297222 0,0,0  1 21, 0,
chr8 143937067 143939505 PLEC|NM_201384.3|overlapping|GTG 0 - 143937067 143937067 0,0,0  5 4,78,90,62,156, 0,97,1083,1563,2282,
chr8 143939360 143939534 PLEC|NM_201384.3|overlapping|GTG 0 - 143939360 143939360 0,0,0  1 174, 0,
chr8 143939497 143939536 PLEC|NM_201384.3|non-overlapping|CTG 0 - 143939497 143939497 0,0,0  1 39, 0,
chr8 143937067 143939580 PLEC|NM_201384.3|overlapping|CTG 0 - 143937067 143937067 0,0,0  5 4,78,90,62,231, 0,97,1083,1563,2282,
chr8 144326719 144326737 DGAT1|NM_012079.6|non-overlapping|GTG 0 - 144326719 144326719 0,0,0  1 18, 0,
chr8 144316553 144326780 DGAT1|NM_012079.6|CDS_extension|CTG 0 - 144316553 144316553 0,0,0 17 156,63,88,66,113,45,42,39,104,75,102,106,53,86,41,88,344, 0,299,468,633,779,990,1117,1230,1360,1541,1707,1907,2145,2281,2474,4767,9883,
chr9   6533016   6645619 GLDC|NM_000170.3|CDS_extension|CTG 0 -   6533016   6533016 0,0,0 25 144,81,173,96,112,142,113,150,126,76,143,42,85,98,81,140,106,97,197,148,78,165,136,79,375, 0,1691,3047,7034,17786,20351,21652,23136,25542,32337,54124,55384,55601,56178,59126,59834,61997,69092,71571,72114,73575,77175,87167,111597,112228,
chr9   6533016   6645631 GLDC|NM_000170.3|CDS_extension|CTG 0 -   6533016   6533016 0,0,0 25 144,81,173,96,112,142,113,150,126,76,143,42,85,98,81,140,106,97,197,148,78,165,136,79,387, 0,1691,3047,7034,17786,20351,21652,23136,25542,32337,54124,55384,55601,56178,59126,59834,61997,69092,71571,72114,73575,77175,87167,111597,112228,
chr9  26947041  26947080 PLAA|NM_001031689.3|overlapping|GTG 0 -  26947041  26947041 0,0,0  1 39, 0,
chr9  26935122  26947100 PLAA|NM_001031689.3|overlapping|CTG 0 -  26935122  26935122 0,0,0  2 84,204, 0,11774,
chr9  26947041  26947146 PLAA|NM_001031689.3|overlapping|CTG 0 -  26947041  26947041 0,0,0  1 105, 0,
chr9  33167184  33167253 B4GALT1|NM_001497.4|non-overlapping|GTG 0 -  33167184  33167184 0,0,0  1 69, 0,
chr9  33167261  33167318 B4GALT1|NM_001497.4|non-overlapping|CTG 0 -  33167261  33167261 0,0,0  1 57, 0,
chr9  33167200  33167326 B4GALT1|NM_001497.4|non-overlapping|CTG 0 -  33167200  33167200 0,0,0  1 126, 0,
chr9  34372942  34372981 MYORG|NM_020702.5|non-overlapping|ATG 0 -  34372942  34372942 0,0,0  1 39, 0,
chr9  34372953  34376862 MYORG|NM_020702.5|non-overlapping|CTG 0 -  34372953  34372953 0,0,0  2 53,70, 0,3839,
chr9  35096503  35096512 PIGO|NM_032634.4|non-overlapping|CTG 0 -  35096503  35096503 0,0,0  1 9, 0,
chr9  35748784  35748958 GBA2|NM_020944.3|non-overlapping|ATG 0 -  35748784  35748784 0,0,0  1 174, 0,
chr9  35748839  35749118 GBA2|NM_020944.3|non-overlapping|CTG 0 -  35748839  35748839 0,0,0  1 279, 0,
chr9  35748969  35749131 GBA2|NM_020944.3|non-overlapping|CTG 0 -  35748969  35748969 0,0,0  1 162, 0,
chr9  35748969  35749176 GBA2|NM_020944.3|non-overlapping|CTG 0 -  35748969  35748969 0,0,0  1 207, 0,
chr9  36249204  36258355 GNE|NM_005476.7|overlapping|GTG 0 -  36249204  36249204 0,0,0  2 193,35, 0,9116,
chr9  36249383  36258390 GNE|NM_005476.7|non-overlapping|GTG 0 -  36249383  36249383 0,0,0  2 14,70, 0,8937,
chr9  36258329  36258401 GNE|NM_005476.7|non-overlapping|CTG 0 -  36258329  36258329 0,0,0  1 72, 0,
chr9  86274204  86282537 ISCA1|NM_030940.4|overlapping|ATG 0 -  86274204  86274204 0,0,0  2 38,160, 0,8173,
chr9  95249259  95317583 FANCC|NM_000136.3|overlapping|GTG 0 -  95249259  95249259 0,0,0  2 110,58, 0,68266,
chr9  95249320  95317623 FANCC|NM_000136.3|non-overlapping|ACG 0 -  95249320  95249320 0,0,0  2 49,98, 0,68205,
chr9 108931060 108933929 ELP1|NM_003640.5|overlapping|CTG 0 - 108931060 108931060 0,0,0  2 141,66, 0,2803,
chr9 108933931 108933955 ELP1|NM_003640.5|non-overlapping|CTG 0 - 108933931 108933931 0,0,0  1 24, 0,
chr9 108933921 108933969 ELP1|NM_003640.5|non-overlapping|ATT 0 - 108933921 108933921 0,0,0  1 48, 0,
chr9 108931060 108933980 ELP1|NM_003640.5|overlapping|ACG 0 - 108931060 108931060 0,0,0  2 141,117, 0,2803,
chr9 108931060 108934016 ELP1|NM_003640.5|overlapping|GTG 0 - 108931060 108931060 0,0,0  2 141,153, 0,2803,
chr9 108931060 108934046 ELP1|NM_003640.5|overlapping|CTG 0 - 108931060 108931060 0,0,0  2 141,183, 0,2803,
chr9 108934015 108934078 ELP1|NM_003640.5|non-overlapping|CTG 0 - 108934015 108934015 0,0,0  1 63, 0,
chr9 108934015 108934087 ELP1|NM_003640.5|non-overlapping|ATT 0 - 108934015 108934015 0,0,0  1 72, 0,
chr9 113393585 113393618 ALAD|NM_000031.6|non-overlapping|ATG 0 - 113393585 113393585 0,0,0  1 33, 0,
chr9 113401219 113401249 ALAD|NM_000031.6|non-overlapping|GTG 0 - 113401219 113401219 0,0,0  1 30, 0,
chr9 113388299 113401277 ALAD|NM_000031.6|CDS_extension|CTG 0 - 113388299 113388299 0,0,0 12 62,130,87,88,56,89,84,136,97,51,188,66, 0,677,1138,1299,1473,2105,2293,2498,3227,3819,5147,12912,
chr9 114505132 114505138 WHRN|NM_015404.4|non-overlapping|ATG 0 - 114505132 114505132 0,0,0  1 6, 0,
chr9 114505294 114505366 WHRN|NM_015404.4|non-overlapping|ATG 0 - 114505294 114505294 0,0,0  1 72, 0,
chr9 120580118 120580139 CDK5RAP2|NM_018249.6|non-overlapping|ATG 0 - 120580118 120580118 0,0,0  1 21, 0,
chr9 127873052 127877655 AK1|NM_000476.3|overlapping|CTG 0 - 127873052 127873052 0,0,0  3 9,39,33, 0,1558,4570,
chr9 127937471 127937858 DPM2|NM_003863.4|overlapping|ATG 0 - 127937471 127937471 0,0,0  2 52,41, 0,346,
chr9 128947307 128947370 DOLK|NM_014908.4|non-overlapping|CTG 0 - 128947307 128947307 0,0,0  1 63, 0,
chr9 128947395 128947431 DOLK|NM_014908.4|non-overlapping|CTG 0 - 128947395 128947395 0,0,0  1 36, 0,
chr9 128947307 128947451 DOLK|NM_014908.4|non-overlapping|GTG 0 - 128947307 128947307 0,0,0  1 144, 0,
chr9 128947509 128947524 DOLK|NM_014908.4|non-overlapping|ACG 0 - 128947509 128947509 0,0,0  1 15, 0,
chr9 128947509 128947530 DOLK|NM_014908.4|non-overlapping|GTG 0 - 128947509 128947509 0,0,0  1 21, 0,
chr9 128947549 128947591 DOLK|NM_014908.4|non-overlapping|AGG 0 - 128947549 128947549 0,0,0  1 42, 0,
chr9 129110502 129110553 CRAT|NM_000755.5|overlapping|GTG 0 - 129110502 129110502 0,0,0  1 51, 0,
chr9 129110605 129110623 CRAT|NM_000755.5|non-overlapping|TTG 0 - 129110605 129110605 0,0,0  1 18, 0,
chr9 129110502 129110646 CRAT|NM_000755.5|overlapping|CTG 0 - 129110502 129110502 0,0,0  1 144, 0,
chr9 136439473 136439635 INPP5E|NM_019892.6|non-overlapping|CTG 0 - 136439473 136439473 0,0,0  1 162, 0,
chr9 136439473 136439761 INPP5E|NM_019892.6|non-overlapping|CTG 0 - 136439473 136439473 0,0,0  1 288, 0,
chr9 136677012 136687388 AGPAT2|NM_006412.4|overlapping|CTG 0 - 136677012 136677012 0,0,0  3 124,134,213, 0,410,10163,
chr10  14954006  14954060 DCLRE1C|NM_001033855.3|overlapping|TTG 0 -  14954006  14954006 0,0,0  1 54, 0,
chr10  14954006  14954066 DCLRE1C|NM_001033855.3|overlapping|CTG 0 -  14954006  14954006 0,0,0  1 60, 0,
chr10  27154232  27154319 YME1L1|NM_014263.4|non-overlapping|ACG 0 -  27154232  27154232 0,0,0  1 87, 0,
chr10  67838020  67838056 DNAJC12|NM_021800.3|non-overlapping|GTG 0 -  67838020  67838020 0,0,0  1 36, 0,
chr10  67838098  67838110 DNAJC12|NM_021800.3|non-overlapping|ATG 0 -  67838098  67838098 0,0,0  1 12, 0,
chr10  67838098  67838119 DNAJC12|NM_021800.3|non-overlapping|ATG 0 -  67838098  67838098 0,0,0  1 21, 0,
chr10  67838087  67838168 DNAJC12|NM_021800.3|non-overlapping|ATG 0 -  67838087  67838087 0,0,0  1 81, 0,
chr10  70885900  70888558 PCBD1|NM_000281.4|overlapping|CTG 0 -  70885900  70885900 0,0,0  2 29,28, 0,2630,
chr10  72626041  72626068 MICU1|NM_006077.4|non-overlapping|ATG 0 -  72626041  72626041 0,0,0  1 27, 0,
chr10  73251872  73252534 MRPS16|NM_016065.4|overlapping|CTG 0 -  73251872  73251872 0,0,0  2 151,65, 0,597,
chr10  73252536  73252551 MRPS16|NM_016065.4|non-overlapping|CTG 0 -  73252536  73252536 0,0,0  1 15, 0,
chr10  78026196  78029450 POLR3A|NM_007055.4|overlapping|CTG 0 -  78026196  78026196 0,0,0  2 33,87, 0,3167,
chr10  87818113  87818134 ATAD1|NM_032810.4|non-overlapping|ATG 0 -  87818113  87818113 0,0,0  1 21, 0,
chr10  87818103  87818139 ATAD1|NM_032810.4|non-overlapping|ATG 0 -  87818103  87818103 0,0,0  1 36, 0,
chr10  98443214  98445378 HPS1|NM_000195.5|overlapping|ATG 0 -  98443214  98443214 0,0,0  2 26,79, 0,2085,
chr10  98446807  98446882 HPS1|NM_000195.5|non-overlapping|GTG 0 -  98446807  98446807 0,0,0  1 75, 0,
chr10 100185964 100185976 ERLIN1|NM_006459.4|non-overlapping|ATG 0 - 100185964 100185964 0,0,0  1 12, 0,
chr10 101030242 101030305 PDZD7|NM_001195263.2|non-overlapping|ATG 0 - 101030242 101030242 0,0,0  1 63, 0,
chr10 101030229 101030358 PDZD7|NM_001195263.2|non-overlapping|ATC 0 - 101030229 101030229 0,0,0  1 129, 0,
chr10 101030229 101031097 PDZD7|NM_001195263.2|non-overlapping|CTG 0 - 101030229 101030229 0,0,0  2 155,25, 0,843,
chr10 103917593 103917641 STN1|NM_024928.5|non-overlapping|ATG 0 - 103917593 103917593 0,0,0  1 48, 0,
chr10 103917648 103918130 STN1|NM_024928.5|non-overlapping|CTG 0 - 103917648 103917648 0,0,0  2 8,31, 0,451,
chr10 104232260 104232278 CFAP43|NM_025145.7|non-overlapping|CTG 0 - 104232260 104232260 0,0,0  1 18, 0,
chr10 104230822 104232295 CFAP43|NM_025145.7|overlapping|CTG 0 - 104230822 104230822 0,0,0  2 21,114, 0,1359,
chr10 124397941 124418909 OAT|NM_000274.4|CDS_extension|ACG 0 - 124397941 124397941 0,0,0 10 161,145,114,129,123,128,96,225,228,37, 0,2898,3784,4985,5856,7494,10600,10799,14031,20931,
chr10 125816498 125823211 UROS|NM_000375.3|non-overlapping|CTG 0 - 125816498 125816498 0,0,0  2 27,183, 0,6530,
chr11    615552    615591 IRF7|NM_004031.4|non-overlapping|ATG 0 -    615552    615552 0,0,0  1 39, 0,
chr11    615595    615613 IRF7|NM_004031.4|non-overlapping|CTG 0 -    615595    615595 0,0,0  1 18, 0,
chr11    795006    795051 SLC25A22|NM_024698.6|non-overlapping|CTG 0 -    795006    795006 0,0,0  1 45, 0,
chr11    794998    795127 SLC25A22|NM_024698.6|overlapping|GTG 0 -    794998    794998 0,0,0  1 129, 0,
chr11   1761397   1763915 CTSD|NM_001909.5|overlapping|ATC 0 -   1761397   1761397 0,0,0  2 71,124, 0,2394,
chr11   9265172   9265274 DENND5A|NM_015213.4|non-overlapping|ATG 0 -   9265172   9265172 0,0,0  1 102, 0,
chr11   9265146   9265311 DENND5A|NM_015213.4|non-overlapping|CTG 0 -   9265146   9265146 0,0,0  1 165, 0,
chr11  10294145  10294196 SBF2|NM_030962.3|non-overlapping|ATG 0 -  10294145  10294145 0,0,0  1 51, 0,
chr11  17544272  17544368 USH1C|NM_005709.4|overlapping|CTG 0 -  17544272  17544272 0,0,0  1 96, 0,
chr11  18317903  18321971 HPS5|NM_181507.2|non-overlapping|ATA 0 -  18317903  18317903 0,0,0  2 4,26, 0,4042,
chr11  18317903  18322064 HPS5|NM_181507.2|non-overlapping|ATG 0 -  18317903  18317903 0,0,0  2 4,119, 0,4042,
chr11  18321964  18322090 HPS5|NM_181507.2|non-overlapping|CTG 0 -  18321964  18321964 0,0,0  1 126, 0,
chr11  18317903  18322100 HPS5|NM_181507.2|non-overlapping|ATC 0 -  18317903  18317903 0,0,0  2 4,155, 0,4042,
chr11  18321964  18322132 HPS5|NM_181507.2|non-overlapping|GTG 0 -  18321964  18321964 0,0,0  1 168, 0,
chr11  18322138  18322162 HPS5|NM_181507.2|non-overlapping|CTG 0 -  18322138  18322138 0,0,0  1 24, 0,
chr11  33731461  33736408 CD59|NM_203330.2|non-overlapping|CTG 0 -  33731461  33731461 0,0,0  3 7,116,27, 0,2033,4920,
chr11  36594139  36598162 RAG2|NM_000536.4|overlapping|ATT 0 -  36594139  36594139 0,0,0  2 56,61, 0,3962,
chr11  36598182  36598197 RAG2|NM_000536.4|non-overlapping|GTG 0 -  36598182  36598182 0,0,0  1 15, 0,
chr11  36598182  36598215 RAG2|NM_000536.4|non-overlapping|CTG 0 -  36598182  36598182 0,0,0  1 33, 0,
chr11  45917973  45917982 PEX16|NM_004813.4|non-overlapping|ATG 0 -  45917973  45917973 0,0,0  1 9, 0,
chr11  45918049  45918058 PEX16|NM_004813.4|non-overlapping|ATG 0 -  45918049  45918049 0,0,0  1 9, 0,
chr11  62621943  62622135 B3GAT3|NM_012200.4|overlapping|ATG 0 -  62621943  62621943 0,0,0  1 192, 0,
chr11  65720275  65720780 RNASEH2C|NM_032193.4|overlapping|CTG 0 -  65720275  65720275 0,0,0  2 142,194, 0,311,
chr11  65871345  65872740 EFEMP2|NM_016938.5|overlapping|ATT 0 -  65871345  65871345 0,0,0  4 18,49,118,58, 0,624,898,1337,
chr11  66347591  66347600 B4GAT1|NM_006876.3|non-overlapping|CTG 0 -  66347591  66347591 0,0,0  1 9, 0,
chr11  71447632  71447638 DHCR7|NM_001360.3|non-overlapping|CTG 0 -  71447632  71447632 0,0,0  1 6, 0,
chr11  71447632  71447641 DHCR7|NM_001360.3|non-overlapping|CTG 0 -  71447632  71447632 0,0,0  1 9, 0,
chr11  71447671  71447689 DHCR7|NM_001360.3|non-overlapping|GTG 0 -  71447671  71447671 0,0,0  1 18, 0,
chr11  71447671  71447713 DHCR7|NM_001360.3|non-overlapping|ATC 0 -  71447671  71447671 0,0,0  1 42, 0,
chr11  71447671  71447722 DHCR7|NM_001360.3|non-overlapping|TTG 0 -  71447671  71447671 0,0,0  1 51, 0,
chr11  71448308  71448356 DHCR7|NM_001360.3|non-overlapping|GTG 0 -  71448308  71448308 0,0,0  1 48, 0,
chr11  71448361  71448376 DHCR7|NM_001360.3|non-overlapping|CTG 0 -  71448361  71448361 0,0,0  1 15, 0,
chr11  74170811  74170835 C2CD3|NM_015531.6|non-overlapping|CTG 0 -  74170811  74170811 0,0,0  1 24, 0,
chr11  74170788  74170860 C2CD3|NM_015531.6|overlapping|ATG 0 -  74170788  74170788 0,0,0  1 72, 0,
chr11  74170788  74170908 C2CD3|NM_015531.6|overlapping|CTG 0 -  74170788  74170788 0,0,0  1 120, 0,
chr11  74170819  74170945 C2CD3|NM_015531.6|non-overlapping|CTG 0 -  74170819  74170819 0,0,0  1 126, 0,
chr11  78574403  78574532 NARS2|NM_024678.6|overlapping|GTG 0 -  78574403  78574403 0,0,0  1 129, 0,
chr11  78574565  78574592 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574565  78574565 0,0,0  1 27, 0,
chr11  78574565  78574613 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574565  78574565 0,0,0  1 48, 0,
chr11  78574565  78574643 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574565  78574565 0,0,0  1 78, 0,
chr11  78574565  78574652 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574565  78574565 0,0,0  1 87, 0,
chr11  78574639  78574666 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574639  78574639 0,0,0  1 27, 0,
chr11  78574565  78574691 NARS2|NM_024678.6|non-overlapping|TTG 0 -  78574565  78574565 0,0,0  1 126, 0,
chr11  78574639  78574702 NARS2|NM_024678.6|non-overlapping|ATT 0 -  78574639  78574639 0,0,0  1 63, 0,
chr11  78574712  78574727 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574712  78574712 0,0,0  1 15, 0,
chr11  78574639  78574744 NARS2|NM_024678.6|non-overlapping|CTG 0 -  78574639  78574639 0,0,0  1 105, 0,
chr11  78574847  78574856 NARS2|NM_024678.6|non-overlapping|ATG 0 -  78574847  78574847 0,0,0  1 9, 0,
chr11  95888162  95923991 MTMR2|NM_016156.6|overlapping|CTG 0 -  95888162  95888162 0,0,0  2 99,117, 0,35712,
chr11  95924000  95924006 MTMR2|NM_016156.6|non-overlapping|CTG 0 -  95924000  95924000 0,0,0  1 6, 0,
chr11  95924050  95924059 MTMR2|NM_016156.6|non-overlapping|CTG 0 -  95924050  95924050 0,0,0  1 9, 0,
chr11  95924050  95924092 MTMR2|NM_016156.6|non-overlapping|ATG 0 -  95924050  95924050 0,0,0  1 42, 0,
chr11 102797465 102798141 MMP1|NM_002421.4|overlapping|CTG 0 - 102797465 102797465 0,0,0  2 35,154, 0,522,
chr11 110279717 110279732 RDX|NM_002906.4|non-overlapping|GTG 0 - 110279717 110279717 0,0,0  1 15, 0,
chr11 110279733 110279742 RDX|NM_002906.4|non-overlapping|ATT 0 - 110279733 110279733 0,0,0  1 9, 0,
chr11 110279749 110296498 RDX|NM_002906.4|non-overlapping|ACG 0 - 110279749 110279749 0,0,0  2 7,32, 0,16717,
chr11 110279717 110296535 RDX|NM_002906.4|non-overlapping|CTG 0 - 110279717 110279717 0,0,0  2 39,69, 0,16749,
chr11 110279749 110296603 RDX|NM_002906.4|non-overlapping|CTG 0 - 110279749 110279749 0,0,0  2 7,137, 0,16717,
chr11 111871513 111871540 ALG9|NM_024740.2|non-overlapping|ATG 0 - 111871513 111871513 0,0,0  1 27, 0,
chr11 111911853 111911868 CRYAB|NM_001885.3|non-overlapping|ATG 0 - 111911853 111911853 0,0,0  1 15, 0,
chr11 111911848 111911905 CRYAB|NM_001885.3|non-overlapping|ATG 0 - 111911848 111911848 0,0,0  1 57, 0,
chr11 118264343 118264400 MPZL2|NM_005797.4|non-overlapping|ATG 0 - 118264343 118264343 0,0,0  1 57, 0,
chr11 111911864 111911972 CRYAB|NM_001289808.2|non-overlapping|ATG 0 - 111911864 111911972 0,0,0  1 108, 0,
chr11 118264384 118264453 MPZL2|NM_005797.4|non-overlapping|CTG 0 - 118264384 118264384 0,0,0  1 69, 0,
chr11 118340590 118342624 CD3D|NM_000732.6|overlapping|ATG 0 - 118340590 118340590 0,0,0  2 3,72, 0,1962,
chr11 118342620 118342641 CD3D|NM_000732.6|non-overlapping|CTG 0 - 118342620 118342620 0,0,0  1 21, 0,
chr11 118342642 118342657 CD3D|NM_000732.6|non-overlapping|CTG 0 - 118342642 118342642 0,0,0  1 15, 0,
chr11 119056143 119057046 HYOU1|NM_006389.5|overlapping|CTG 0 - 119056143 119056143 0,0,0  2 24,27, 0,876,
chr11 119057135 119057141 HYOU1|NM_006389.5|non-overlapping|ATG 0 - 119057135 119057135 0,0,0  1 6, 0,
chr11 119101618 119101693 DPAGT1|NM_001382.4|overlapping|CTG 0 - 119101618 119101618 0,0,0  1 75, 0,
chr11 119101689 119101704 DPAGT1|NM_001382.4|non-overlapping|TTG 0 - 119101689 119101689 0,0,0  1 15, 0,
chr11 119101664 119101730 DPAGT1|NM_001382.4|non-overlapping|CTG 0 - 119101664 119101664 0,0,0  1 66, 0,
chr11 119101664 119101754 DPAGT1|NM_001382.4|non-overlapping|GTG 0 - 119101664 119101664 0,0,0  1 90, 0,
chr11 119101726 119101777 DPAGT1|NM_001382.4|non-overlapping|ATT 0 - 119101726 119101726 0,0,0  1 51, 0,
chr11 119101726 119101792 DPAGT1|NM_001382.4|non-overlapping|CTG 0 - 119101726 119101726 0,0,0  1 66, 0,
chr11 119101689 119101848 DPAGT1|NM_001382.4|non-overlapping|ATA 0 - 119101689 119101689 0,0,0  1 159, 0,
chr11 123195201 123195291 CLMP|NM_024769.5|non-overlapping|ATG 0 - 123195201 123195201 0,0,0  1 90, 0,
chr11 123194970 123195069 CLMP|NM_024769.5|non-overlapping|ATG 0 - 123194970 123194970 0,0,0  1 99, 0,
chr11 123097915 123195220 CLMP|NM_024769.5|overlapping|GTG 0 - 123097915 123097915 0,0,0  2 37,308, 0,96997,
chr11 134224242 134224308 NCAPD3|NM_015261.3|non-overlapping|ATG 0 - 134224242 134224242 0,0,0  1 66, 0,
chr11 134224340 134224517 NCAPD3|NM_015261.3|non-overlapping|ATG 0 - 134224340 134224340 0,0,0  1 177, 0,
chr12   4536162   4538435 C12orf4|NM_020374.4|overlapping|CTG 0 -   4536162   4536162 0,0,0  2 57,27, 0,2246,
chr12   4536162   4538456 C12orf4|NM_020374.4|overlapping|CTG 0 -   4536162   4536162 0,0,0  2 57,48, 0,2246,
chr12   4538452   4538494 C12orf4|NM_020374.4|non-overlapping|ATG 0 -   4538452   4538452 0,0,0  1 42, 0,
chr12  15682959  15789267 EPS8|NM_004447.6|non-overlapping|CTG 0 -  15682959  15682959 0,0,0  2 13,107, 0,106201,
chr12  15682959  15789303 EPS8|NM_004447.6|non-overlapping|CTG 0 -  15682959  15682959 0,0,0  2 13,143, 0,106201,
chr12  15789303  15789318 EPS8|NM_004447.6|non-overlapping|ATC 0 -  15789303  15789303 0,0,0  1 15, 0,
chr12  26832773  26832791 ITPR2|NM_002223.4|overlapping|ATG 0 -  26832773  26832773 0,0,0  1 18, 0,
chr12  51026310  51026361 SLC11A2|NM_000617.3|non-overlapping|ATG 0 -  51026310  51026310 0,0,0  1 51, 0,
chr12  53321406  53321520 AAAS|NM_015665.6|overlapping|CTG 0 -  53321406  53321406 0,0,0  1 114, 0,
chr12  53321406  53321535 AAAS|NM_015665.6|overlapping|TTG 0 -  53321406  53321406 0,0,0  1 129, 0,
chr12  53321548  53321560 AAAS|NM_015665.6|non-overlapping|ATA 0 -  53321548  53321548 0,0,0  1 12, 0,
chr12  55707567  55707774 ITGA7|NM_002206.3|overlapping|TTG 0 -  55707567  55707567 0,0,0  1 207, 0,
chr12  55707789  55707864 ITGA7|NM_002206.3|non-overlapping|GTG 0 -  55707789  55707789 0,0,0  1 75, 0,
chr12  56356539  56360090 STAT2|NM_005419.4|overlapping|ATT 0 -  56356539  56356539 0,0,0  2 39,33, 0,3518,
chr12  56360061  56360112 STAT2|NM_005419.4|non-overlapping|ACG 0 -  56360061  56360061 0,0,0  1 51, 0,
chr12  64716740  64759357 GNS|NM_002076.4|CDS_extension|CTG 0 -  64716740  64716740 0,0,0 14 79,161,111,108,102,104,119,83,168,99,66,207,60,273, 0,3281,4854,6265,12215,20263,22640,23865,26400,28068,28918,30971,35957,42344,
chr12  64759257  64759377 GNS|NM_002076.4|overlapping|ACG 0 -  64759257  64759257 0,0,0  1 120, 0,
chr12  76347700  76348386 BBS10|NM_024685.4|overlapping|CTG 0 -  76347700  76347700 0,0,0  2 87,225, 0,461,
chr12  88141296  88141921 CEP290|NM_025114.4|overlapping|CTG 0 -  88141296  88141296 0,0,0  2 38,22, 0,603,
chr12  88141899  88142064 CEP290|NM_025114.4|non-overlapping|ATG 0 -  88141899  88141899 0,0,0  1 165, 0,
chr12  89497252  89525915 POC1B|NM_172240.3|overlapping|TTG 0 -  89497252  89497252 0,0,0  3 90,85,35, 0,27867,28628,
chr12  89497252  89526155 POC1B|NM_172240.3|overlapping|ATG 0 -  89497252  89497252 0,0,0  3 90,85,275, 0,27867,28628,
chr12  94459676  94459688 CEP83|NM_016122.3|non-overlapping|ATG 0 -  94459676  94459676 0,0,0  1 12, 0,
chr12  94459700  94459730 CEP83|NM_016122.3|non-overlapping|CTG 0 -  94459700  94459700 0,0,0  1 30, 0,
chr12  94459700  94459769 CEP83|NM_016122.3|non-overlapping|ACG 0 -  94459700  94459700 0,0,0  1 69, 0,
chr12  94459700  94459790 CEP83|NM_016122.3|non-overlapping|ATA 0 -  94459700  94459700 0,0,0  1 90, 0,
chr12  94459771  94459837 CEP83|NM_016122.3|non-overlapping|GTG 0 -  94459771  94459771 0,0,0  1 66, 0,
chr12  94459859  94459877 CEP83|NM_016122.3|non-overlapping|GTG 0 -  94459859  94459859 0,0,0  1 18, 0,
chr12  94459859  94459913 CEP83|NM_016122.3|non-overlapping|ATG 0 -  94459859  94459859 0,0,0  1 54, 0,
chr12 101830737 101830752 GNPTAB|NM_024312.5|non-overlapping|ATG 0 - 101830737 101830737 0,0,0  1 15, 0,
chr12 101830784 101830808 GNPTAB|NM_024312.5|non-overlapping|ATG 0 - 101830784 101830784 0,0,0  1 24, 0,
chr12 102118526 102118541 NUP37|NM_024057.4|non-overlapping|CTG 0 - 102118526 102118526 0,0,0  1 15, 0,
chr12 102118471 102118573 NUP37|NM_024057.4|overlapping|TTG 0 - 102118471 102118471 0,0,0  1 102, 0,
chr12 102118562 102120079 NUP37|NM_024057.4|non-overlapping|CTG 0 - 102118562 102118562 0,0,0  2 21,30, 0,1487,
chr12 109568853 109573487 MMAB|NM_052845.4|overlapping|CTG 0 - 109568853 109568853 0,0,0  3 10,62,141, 0,2795,4493,
chr12 109568782 109573515 MMAB|NM_052845.4|overlapping|CTG 0 - 109568782 109568782 0,0,0  3 81,62,169, 0,2866,4564,
chr12 122266457 122266472 VPS33A|NM_022916.6|non-overlapping|GTG 0 - 122266457 122266457 0,0,0  1 15, 0,
chr12 123632440 123633583 EIF2B1|NM_001414.4|overlapping|CTG 0 - 123632440 123632440 0,0,0  2 6,39, 0,1104,
chr13  20189584  20192829 GJB2|NM_004004.6|non-overlapping|ACG 0 -  20189584  20189584 0,0,0  2 19,47, 0,3198,
chr13  20189584  20192853 GJB2|NM_004004.6|non-overlapping|AGG 0 -  20189584  20189584 0,0,0  2 19,71, 0,3198,
chr13  24913015  24913057 CENPJ|NM_018451.5|overlapping|TTG 0 -  24913015  24913015 0,0,0  1 42, 0,
chr13  24913015  24913078 CENPJ|NM_018451.5|overlapping|ATA 0 -  24913015  24913015 0,0,0  1 63, 0,
chr13  24913049  24922781 CENPJ|NM_018451.5|non-overlapping|CTG 0 -  24913049  24913049 0,0,0  2 42,21, 0,9711,
chr13  24913015  24922792 CENPJ|NM_018451.5|overlapping|GTG 0 -  24913015  24913015 0,0,0  2 76,32, 0,9745,
chr13  24913015  24922819 CENPJ|NM_018451.5|overlapping|ATG 0 -  24913015  24913015 0,0,0  2 76,59, 0,9745,
chr13  36335736  36346401 SPART|NM_015087.5|overlapping|GTG 0 -  36335736  36335736 0,0,0  2 96,177, 0,10488,
chr13  49567289  49585470 RCBTB1|NM_018191.4|non-overlapping|ACG 0 -  49567289  49567289 0,0,0  3 31,80,27, 0,13215,18154,
chr13  49567289  49585485 RCBTB1|NM_018191.4|non-overlapping|CTG 0 -  49567289  49567289 0,0,0  3 31,80,42, 0,13215,18154,
chr13  49580540  49585504 RCBTB1|NM_018191.4|non-overlapping|ATT 0 -  49580540  49580540 0,0,0  2 44,61, 0,4903,
chr13  49567289  49585512 RCBTB1|NM_018191.4|non-overlapping|CTG 0 -  49567289  49567289 0,0,0  3 31,80,69, 0,13215,18154,
chr13 108211179 108214558 LIG4|NM_002312.3|overlapping|ACG 0 - 108211179 108211179 0,0,0  2 117,21, 0,3358,
chr13 108211267 108214604 LIG4|NM_002312.3|non-overlapping|ATC 0 - 108211267 108211267 0,0,0  2 29,67, 0,3270,
chr13 108214557 108214641 LIG4|NM_002312.3|non-overlapping|ATG 0 - 108214557 108214557 0,0,0  1 84, 0,
chr14  20454992  20455031 OSGEP|NM_017807.4|non-overlapping|ATG 0 -  20454992  20454992 0,0,0  1 39, 0,
chr14  20454660  20454711 OSGEP|NM_017807.4|overlapping|CTG 0 -  20454660  20454660 0,0,0  1 51, 0,
chr14  20452400  20454724 OSGEP|NM_017807.4|overlapping|ATT 0 -  20452400  20452400 0,0,0  2 48,156, 0,2168,
chr14  20454747  20454768 OSGEP|NM_017807.4|non-overlapping|CTG 0 -  20454747  20454747 0,0,0  1 21, 0,
chr14  20454725  20454797 OSGEP|NM_017807.4|non-overlapping|CTG 0 -  20454725  20454725 0,0,0  1 72, 0,
chr14  21536967  21537042 SALL2|NM_005407.3|non-overlapping|GTG 0 -  21536967  21536967 0,0,0  1 75, 0,
chr14  39103070  39103133 SEC23A|NM_006364.4|non-overlapping|CTG 0 -  39103070  39103070 0,0,0  1 63, 0,
chr14  39096114  39103147 SEC23A|NM_006364.4|overlapping|ACG 0 -  39096114  39096114 0,0,0  2 25,116, 0,6917,
chr14  39103157  39103214 SEC23A|NM_006364.4|non-overlapping|ATG 0 -  39103157  39103157 0,0,0  1 57, 0,
chr14  39170195  39170207 TRAPPC6B|NM_177452.4|non-overlapping|ATG 0 -  39170195  39170195 0,0,0  1 12, 0,
chr14  39170220  39170253 TRAPPC6B|NM_177452.4|non-overlapping|TTG 0 -  39170220  39170220 0,0,0  1 33, 0,
chr14  50312172  50312193 L2HGDH|NM_024884.3|non-overlapping|GTG 0 -  50312172  50312172 0,0,0  1 21, 0,
chr14  50312172  50312205 L2HGDH|NM_024884.3|non-overlapping|GTG 0 -  50312172  50312172 0,0,0  1 33, 0,
chr14  50831018  50831048 NIN|NM_020921.4|non-overlapping|ATG 0 -  50831018  50831018 0,0,0  1 30, 0,
chr14  53153054  53153150 DDHD1|NM_001160147.2|overlapping|CTG 0 -  53153054  53153054 0,0,0  1 96, 0,
chr14  53153094  53153166 DDHD1|NM_001160147.2|overlapping|ATG 0 -  53153094  53153094 0,0,0  1 72, 0,
chr14  53153205  53153298 DDHD1|NM_001160147.2|non-overlapping|ATG 0 -  53153205  53153205 0,0,0  1 93, 0,
chr14  60979829  60980998 TRMT5|NM_020810.3|overlapping|CTG 0 -  60979829  60979829 0,0,0  2 57,36, 0,1133,
chr14  67816002  67816017 ZFYVE26|NM_015346.4|non-overlapping|ATG 0 -  67816002  67816002 0,0,0  1 15, 0,
chr14  67816002  67816576 ZFYVE26|NM_015346.4|non-overlapping|ATG 0 -  67816002  67816002 0,0,0  2 44,43, 0,531,
chr14  74299593  74302943 ABCD4|NM_005050.4|overlapping|CTG 0 -  74299593  74299593 0,0,0  3 82,119,69, 0,556,3281,
chr14  74302949  74302958 ABCD4|NM_005050.4|non-overlapping|CTG 0 -  74302949  74302949 0,0,0  1 9, 0,
chr14  74302993  74303011 ABCD4|NM_005050.4|non-overlapping|ACG 0 -  74302993  74302993 0,0,0  1 18, 0,
chr14  77320488  77320722 POMT2|NM_013382.7|overlapping|GTG 0 -  77320488  77320488 0,0,0  1 234, 0,
chr14  77320751  77320799 POMT2|NM_013382.7|non-overlapping|GTG 0 -  77320751  77320751 0,0,0  1 48, 0,
chr14  77457177  77457219 VIPAS39|NM_022067.4|non-overlapping|ATG 0 -  77457177  77457177 0,0,0  1 42, 0,
chr14  77457313  77457346 VIPAS39|NM_022067.4|non-overlapping|CTG 0 -  77457313  77457313 0,0,0  1 33, 0,
chr14  77457518  77457533 VIPAS39|NM_022067.4|non-overlapping|CTG 0 -  77457518  77457518 0,0,0  1 15, 0,
chr14  77457177  77457567 VIPAS39|NM_022067.4|non-overlapping|CTG 0 -  77457177  77457177 0,0,0  2 188,73, 0,317,
chr14  77457177  77457576 VIPAS39|NM_022067.4|non-overlapping|CTG 0 -  77457177  77457177 0,0,0  2 188,82, 0,317,
chr14  91947466  91947508 FBLN5|NM_006329.4|non-overlapping|ATG 0 -  91947466  91947466 0,0,0  1 42, 0,
chr14  91947575  91947605 FBLN5|NM_006329.4|non-overlapping|ATT 0 -  91947575  91947575 0,0,0  1 30, 0,
chr14  92039734  92039791 TRIP11|NM_004239.4|non-overlapping|CTG 0 -  92039734  92039734 0,0,0  1 57, 0,
chr14  92039843  92039927 TRIP11|NM_004239.4|non-overlapping|ATG 0 -  92039843  92039843 0,0,0  1 84, 0,
chr14  92039973  92040012 TRIP11|NM_004239.4|non-overlapping|TTG 0 -  92039973  92039973 0,0,0  1 39, 0,
chr14  92039973  92040030 TRIP11|NM_004239.4|non-overlapping|ATG 0 -  92039973  92039973 0,0,0  1 57, 0,
chr14  94388562  94388574 SERPINA1|NM_000295.5|non-overlapping|CTG 0 -  94388562  94388562 0,0,0  1 12, 0,
chr14  94388562  94388643 SERPINA1|NM_000295.5|non-overlapping|CTG 0 -  94388562  94388562 0,0,0  1 81, 0,
chr14 105300671 105300680 BRF1|NM_001519.4|non-overlapping|GTG 0 - 105300671 105300671 0,0,0  1 9, 0,
chr14 105228885 105300777 BRF1|NM_001519.4|overlapping|CTG 0 - 105228885 105228885 0,0,0  7 28,150,73,32,174,81,332, 0,12379,23621,27632,43835,57410,71560,
chr14 105300671 105300887 BRF1|NM_001519.4|non-overlapping|GTG 0 - 105300671 105300671 0,0,0  1 216, 0,
chr15  29269443  29269749 NSMCE3|NM_138704.4|overlapping|CTG 0 -  29269443  29269443 0,0,0  1 306, 0,
chr15  34318655  34318769 SLC12A6|NM_005135.2|overlapping|CTG 0 -  34318655  34318655 0,0,0  1 114, 0,
chr15  34343021  34343090 NOP10|NM_018648.4|overlapping|CTG 0 -  34343021  34343021 0,0,0  1 69, 0,
chr15  34343079  34343109 NOP10|NM_018648.4|non-overlapping|GTG 0 -  34343079  34343079 0,0,0  1 30, 0,
chr15  41397003  41397102 NDUFAF1|NM_016013.4|overlapping|TTG 0 -  41397003  41397003 0,0,0  1 99, 0,
chr15  41402181  41402220 NDUFAF1|NM_016013.4|non-overlapping|ATT 0 -  41402181  41402181 0,0,0  1 39, 0,
chr15  41402219  41402243 NDUFAF1|NM_016013.4|non-overlapping|ACG 0 -  41402219  41402219 0,0,0  1 24, 0,
chr15  41402215  41402290 NDUFAF1|NM_016013.4|non-overlapping|ATT 0 -  41402215  41402215 0,0,0  1 75, 0,
chr15  41402371  41402389 NDUFAF1|NM_016013.4|non-overlapping|CTG 0 -  41402371  41402371 0,0,0  1 18, 0,
chr15  48810994  48811015 CEP152|NM_014985.4|non-overlapping|TTG 0 -  48810994  48810994 0,0,0  1 21, 0,
chr15  55270166  55270226 RAB27A|NM_004580.5|non-overlapping|TTG 0 -  55270166  55270166 0,0,0  1 60, 0,
chr15  55270251  55270257 RAB27A|NM_004580.5|non-overlapping|ATG 0 -  55270251  55270251 0,0,0  1 6, 0,
chr15  55270166  55270268 RAB27A|NM_004580.5|non-overlapping|CTG 0 -  55270166  55270166 0,0,0  1 102, 0,
chr15  59372630  59372666 MYO1E|NM_004998.4|non-overlapping|ATG 0 -  59372630  59372630 0,0,0  1 36, 0,
chr15  59372711  59372729 MYO1E|NM_004998.4|non-overlapping|ATG 0 -  59372711  59372711 0,0,0  1 18, 0,
chr15  59372581  59372779 MYO1E|NM_004998.4|non-overlapping|CTG 0 -  59372581  59372581 0,0,0  1 198, 0,
chr15  59372843  59372852 MYO1E|NM_004998.4|non-overlapping|ACG 0 -  59372843  59372843 0,0,0  1 9, 0,
chr15  62044236  62060441 VPS13C|NM_020821.3|overlapping|CTG 0 -  62044236  62044236 0,0,0  2 19,167, 0,16038,
chr15  63346702  63381787 CA12|NM_001218.5|overlapping|CTG 0 -  63346702  63346702 0,0,0  3 7,21,152, 0,28955,34933,
chr15  63346702  63381826 CA12|NM_001218.5|overlapping|ACG 0 -  63346702  63346702 0,0,0  3 7,21,191, 0,28955,34933,
chr15  63775636  63833903 HERC1|NM_003922.4|non-overlapping|ACG 0 -  63775636  63775636 0,0,0  2 13,77, 0,58190,
chr15  63775643  63833910 HERC1|NM_003922.4|non-overlapping|ATA 0 -  63775643  63775643 0,0,0  2 6,84, 0,58183,
chr15  64989698  64989722 SPG21|NM_016630.7|non-overlapping|CTG 0 -  64989698  64989698 0,0,0  1 24, 0,
chr15  64989698  64989800 SPG21|NM_016630.7|non-overlapping|CTG 0 -  64989698  64989698 0,0,0  1 102, 0,
chr15  68218636  68229637 CLN6|NM_017882.3|overlapping|CTG 0 -  68218636  68218636 0,0,0  2 14,136, 0,10865,
chr15  68208139  68229674 CLN6|NM_017882.3|CDS_extension|CTG 0 -  68208139  68208139 0,0,0  7 271,123,56,189,99,115,173, 0,1497,3123,3535,6150,10396,21362,
chr15  72046579  72046618 MYO9A|NM_006901.4|non-overlapping|ATG 0 -  72046579  72046579 0,0,0  1 39, 0,
chr15  72046599  72117752 MYO9A|NM_006901.4|non-overlapping|CTG 0 -  72046599  72046599 0,0,0  2 35,73, 0,71080,
chr15  72117827  72117902 MYO9A|NM_006901.4|non-overlapping|ATG 0 -  72117827  72117827 0,0,0  1 75, 0,
chr15  72046579  72117960 MYO9A|NM_006901.4|non-overlapping|CTG 0 -  72046579  72046579 0,0,0  2 55,281, 0,71100,
chr15  72117827  72118034 MYO9A|NM_006901.4|non-overlapping|TTG 0 -  72117827  72117827 0,0,0  1 207, 0,
chr15  72117827  72118043 MYO9A|NM_006901.4|non-overlapping|CTG 0 -  72117827  72117827 0,0,0  1 216, 0,
chr15  74675127  74695984 EDC3|NM_025083.5|non-overlapping|ATG 0 -  74675127  74675127 0,0,0  2 15,105, 0,20752,
chr15  76311416  76311431 ETFA|NM_000126.4|non-overlapping|ACG 0 -  76311416  76311416 0,0,0  1 15, 0,
chr15  76883843  76883864 SCAPER|NM_020843.4|non-overlapping|ATG 0 -  76883843  76883843 0,0,0  1 21, 0,
chr15  78123719  78131261 CIB2|NM_006383.4|overlapping|ATG 0 -  78123719  78123719 0,0,0  2 20,97, 0,7445,
chr15  78123719  78131312 CIB2|NM_006383.4|overlapping|CTG 0 -  78123719  78123719 0,0,0  2 20,148, 0,7445,
chr15  78131260  78131362 CIB2|NM_006383.4|non-overlapping|CTG 0 -  78131260  78131260 0,0,0  1 102, 0,
chr15  82261784  82262663 EFL1|NM_024580.6|non-overlapping|GTG 0 -  82261784  82261784 0,0,0  2 13,50, 0,829,
chr15  82689447  82709842 AP3B2|NM_004644.5|overlapping|CTG 0 -  82689447  82689447 0,0,0  2 6,249, 0,20146,
chr15  89655433  89655445 KIF7|NM_198525.3|non-overlapping|ATG 0 -  89655433  89655433 0,0,0  1 12, 0,
chr15  90232306  90233913 CIB1|NM_006384.4|overlapping|TTG 0 -  90232306  90232306 0,0,0  3 21,35,79, 0,1362,1528,
chr15  91022217  91022292 VPS33B|NM_018668.5|overlapping|ACG 0 -  91022217  91022217 0,0,0  1 75, 0,
chr15  91022340  91022373 VPS33B|NM_018668.5|non-overlapping|CTG 0 -  91022340  91022340 0,0,0  1 33, 0,
chr15  91022333  91022417 VPS33B|NM_018668.5|non-overlapping|GTG 0 -  91022333  91022333 0,0,0  1 84, 0,
chr15  91022257  91022449 VPS33B|NM_018668.5|non-overlapping|CTG 0 -  91022257  91022257 0,0,0  1 192, 0,
chr15  91022388  91022460 VPS33B|NM_018668.5|non-overlapping|CTG 0 -  91022388  91022388 0,0,0  1 72, 0,
chr15  91022456  91022516 VPS33B|NM_018668.5|non-overlapping|CTG 0 -  91022456  91022456 0,0,0  1 60, 0,
chr15  91022525  91022549 VPS33B|NM_018668.5|non-overlapping|CTG 0 -  91022525  91022525 0,0,0  1 24, 0,
chr15 100580825 100580897 LINS1|NM_001040616.3|overlapping|ATG 0 - 100580825 100580825 0,0,0  1 72, 0,
chr15 100602147 100602159 LINS1|NM_001040616.3|non-overlapping|ATG 0 - 100602147 100602147 0,0,0  1 12, 0,
chr15 101251681 101251696 CHSY1|NM_014918.5|non-overlapping|ATG 0 - 101251681 101251681 0,0,0  1 15, 0,
chr15 101251542 101251914 CHSY1|NM_014918.5|non-overlapping|ATG 0 - 101251542 101251542 0,0,0  1 372, 0,
chr15 101251922 101251934 CHSY1|NM_014918.5|non-overlapping|ATG 0 - 101251922 101251922 0,0,0  1 12, 0,
chr16   2329691   2329841 ABCA3|NM_001089.3|non-overlapping|ATG 0 -   2329691   2329691 0,0,0  1 150, 0,
chr16   2328751   2340656 ABCA3|NM_001089.3|non-overlapping|CTG 0 -   2328751   2328751 0,0,0  3 6,207,84, 0,896,11821,
chr16   3608976   3608988 SLX4|NM_032444.4|non-overlapping|ATG 0 -   3608976   3608976 0,0,0  1 12, 0,
chr16   3608976   3609087 SLX4|NM_032444.4|non-overlapping|ATG 0 -   3608976   3608976 0,0,0  1 111, 0,
chr16   3609437   3609530 SLX4|NM_032444.4|non-overlapping|ATG 0 -   3609437   3609437 0,0,0  1 93, 0,
chr16   4351257   4351299 PAM16|NM_016069.11|non-overlapping|ACG 0 -   4351257   4351257 0,0,0  1 42, 0,
chr16   4341485   4351313 PAM16|NM_016069.11|overlapping|CTG 0 -   4341485   4341485 0,0,0  3 19,85,82, 0,1721,9746,
chr16   4802558   4802627 ROGDI|NM_024589.3|overlapping|ATT 0 -   4802558   4802558 0,0,0  1 69, 0,
chr16  10543640  10580573 EMP2|NM_001424.6|overlapping|CTG 0 -  10543640  10543640 0,0,0  3 20,138,25, 0,3899,36908,
chr16  10543640  10580579 EMP2|NM_001424.6|overlapping|ATC 0 -  10543640  10543640 0,0,0  3 20,138,31, 0,3899,36908,
chr16  14629667  14630132 PARN|NM_002582.4|overlapping|CTG 0 -  14629667  14629667 0,0,0  2 7,26, 0,439,
chr16  14629667  14630213 PARN|NM_002582.4|overlapping|CTG 0 -  14629667  14629667 0,0,0  2 7,107, 0,439,
chr16  18801449  18801482 ARL6IP1|NM_015161.3|overlapping|CTG 0 -  18801449  18801449 0,0,0  1 33, 0,
chr16  23452954  23453023 COG7|NM_153603.4|overlapping|CTG 0 -  23452954  23452954 0,0,0  1 69, 0,
chr16  23453026  23453050 COG7|NM_153603.4|non-overlapping|TTG 0 -  23453026  23453026 0,0,0  1 24, 0,
chr16  23453026  23453122 COG7|NM_153603.4|non-overlapping|CTG 0 -  23453026  23453026 0,0,0  1 96, 0,
chr16  23453026  23453158 COG7|NM_153603.4|non-overlapping|CTG 0 -  23453026  23453026 0,0,0  1 132, 0,
chr16  23453026  23453167 COG7|NM_153603.4|non-overlapping|CTG 0 -  23453026  23453026 0,0,0  1 141, 0,
chr16  28489348  28491764 CLN3|NM_001042432.2|overlapping|ATG 0 -  28489348  28489348 0,0,0  3 38,79,51, 0,2133,2365,
chr16  28491769  28491790 CLN3|NM_001042432.2|non-overlapping|CTG 0 -  28491769  28491769 0,0,0  1 21, 0,
chr16  28491769  28491796 CLN3|NM_001042432.2|non-overlapping|ATG 0 -  28491769  28491769 0,0,0  1 27, 0,
chr16  28491769  28492034 CLN3|NM_001042432.2|non-overlapping|CTG 0 -  28491769  28491769 0,0,0  2 66,15, 0,250,
chr16  28491769  28492046 CLN3|NM_001042432.2|non-overlapping|GTG 0 -  28491769  28491769 0,0,0  2 66,27, 0,250,
chr16  56514666  56519911 BBS2|NM_031885.5|overlapping|CTG 0 -  56514666  56514666 0,0,0  2 14,166, 0,5079,
chr16  56514666  56519953 BBS2|NM_031885.5|overlapping|GTG 0 -  56514666  56514666 0,0,0  2 14,208, 0,5079,
chr16  65004960  65004987 CDH11|NM_001797.4|non-overlapping|ATT 0 -  65004960  65004960 0,0,0  1 27, 0,
chr16  65004960  65005008 CDH11|NM_001797.4|non-overlapping|ATG 0 -  65004960  65004960 0,0,0  1 48, 0,
chr16  65053808  65053856 CDH11|NM_001797.4|non-overlapping|ATG 0 -  65053808  65053808 0,0,0  1 48, 0,
chr16  65053868  65121975 CDH11|NM_001797.4|non-overlapping|ATG 0 -  65053868  65053868 0,0,0  2 60,96, 0,68011,
chr16  65121975  65122014 CDH11|NM_001797.4|non-overlapping|ATG 0 -  65121975  65121975 0,0,0  1 39, 0,
chr16  70800929  70801034 VAC14|NM_018052.5|non-overlapping|GTG 0 -  70800929  70800929 0,0,0  1 105, 0,
chr16  70801128  70801146 VAC14|NM_018052.5|non-overlapping|ATG 0 -  70801128  70801128 0,0,0  1 18, 0,
chr16  74666837  74666852 RFWD3|NM_018124.4|non-overlapping|GTG 0 -  74666837  74666837 0,0,0  1 15, 0,
chr16  74740083  74774807 FA2H|NM_024306.5|overlapping|GTG 0 -  74740083  74740083 0,0,0  2 32,322, 0,34402,
chr16  75481852  75481864 CHST6|NM_021615.5|non-overlapping|ATG 0 -  75481852  75481852 0,0,0  1 12, 0,
chr16  88841028  88856909 GALNS|NM_000512.5|overlapping|CTG 0 -  88841028  88841028 0,0,0  4 66,75,124,152, 0,868,1677,15729,
chr16  89653905  89657635 CHMP1A|NM_002768.5|overlapping|TTG 0 -  89653905  89653905 0,0,0  2 18,54, 0,3676,
chr16  89646065  89657635 CHMP1A|NM_001083314.4|overlapping|TTG 0 -  89646065  89646065 0,0,0  6 22,188,129,147,78,54, 0,461,1137,3285,5503,11516,
chr17    710563    714755 VPS53|NM_001128159.3|overlapping|CTG 0 -    710563    710563 0,0,0  2 50,133, 0,4059,
chr17    714705    714774 VPS53|NM_001128159.3|overlapping|CTG 0 -    714705    714705 0,0,0  1 69, 0,
chr17    710563    714803 VPS53|NM_001128159.3|overlapping|CTG 0 -    710563    710563 0,0,0  2 50,181, 0,4059,
chr17    714751    714829 VPS53|NM_001128159.3|non-overlapping|CTG 0 -    714751    714751 0,0,0  1 78, 0,
chr17    748013    752221 GEMIN4|NM_015721.3|overlapping|GTG 0 -    748013    748013 0,0,0  2 19,89, 0,4119,
chr17    748013    752242 GEMIN4|NM_015721.3|overlapping|GTG 0 -    748013    748013 0,0,0  2 19,110, 0,4119,
chr17   5584305   5584347 NLRP1|NM_033004.4|non-overlapping|TTG 0 -   5584305   5584305 0,0,0  1 42, 0,
chr17   6635107   6635143 KIAA0753|NM_014804.3|non-overlapping|ATG 0 -   6635107   6635107 0,0,0  1 36, 0,
chr17   8117895   8118135 ALOXE3|NM_021628.3|overlapping|CTG 0 -   8117895   8117895 0,0,0  1 240, 0,
chr17   8117895   8118213 ALOXE3|NM_021628.3|overlapping|CTG 0 -   8117895   8117895 0,0,0  1 318, 0,
chr17   8909159   8965647 PIK3R5|NM_001142633.3|overlapping|ATC 0 -   8909159   8909159 0,0,0  3 15,116,52, 0,2232,56436,
chr17   8909159   8965668 PIK3R5|NM_001142633.3|overlapping|GTG 0 -   8909159   8909159 0,0,0  3 15,116,73, 0,2232,56436,
chr17   8911500   8965705 PIK3R5|NM_001142633.3|non-overlapping|ATG 0 -   8911500   8911500 0,0,0  2 7,110, 0,54095,
chr17  18028616  18039068 ATPAF2|NM_145691.4|overlapping|CTG 0 -  18028616  18028616 0,0,0  2 43,188, 0,10264,
chr17  18039135  18039159 ATPAF2|NM_145691.4|non-overlapping|ATG 0 -  18039135  18039135 0,0,0  1 24, 0,
chr17  18314780  18314822 TOP3A|NM_004618.5|non-overlapping|ATG 0 -  18314780  18314780 0,0,0  1 42, 0,
chr17  18308906  18314836 TOP3A|NM_004618.5|overlapping|CTG 0 -  18308906  18308906 0,0,0  2 35,238, 0,5692,
chr17  18314887  18314902 TOP3A|NM_004618.5|non-overlapping|CTG 0 -  18314887  18314887 0,0,0  1 15, 0,
chr17  18314887  18314974 TOP3A|NM_004618.5|non-overlapping|CTG 0 -  18314887  18314887 0,0,0  1 87, 0,
chr17  19343458  19362634 B9D1|NM_015681.5|overlapping|ACG 0 -  19343458  19343458 0,0,0  7 3,68,63,97,112,69,128, 0,331,3810,4325,14381,16861,19048,
chr17  19362549  19362687 B9D1|NM_015681.5|overlapping|GTG 0 -  19362549  19362549 0,0,0  1 138, 0,
chr17  28406038  28406191 SLC46A1|NM_080669.6|overlapping|ACG 0 -  28406038  28406038 0,0,0  1 153, 0,
chr17  35577948  35578074 PEX12|NM_000286.3|overlapping|ATG 0 -  35577948  35577948 0,0,0  1 126, 0,
chr17  35578115  35578136 PEX12|NM_000286.3|non-overlapping|ATG 0 -  35578115  35578115 0,0,0  1 21, 0,
chr17  35578280  35578298 PEX12|NM_000286.3|non-overlapping|CTG 0 -  35578280  35578280 0,0,0  1 18, 0,
chr17  35578294  35578432 PEX12|NM_000286.3|non-overlapping|GTG 0 -  35578294  35578294 0,0,0  1 138, 0,
chr17  35578394  35578463 PEX12|NM_000286.3|non-overlapping|CTG 0 -  35578394  35578394 0,0,0  1 69, 0,
chr17  35578294  35578543 PEX12|NM_000286.3|non-overlapping|GTG 0 -  35578294  35578294 0,0,0  1 249, 0,
chr17  42422642  42423167 CAVIN1|NM_012232.6|overlapping|CTG 0 -  42422642  42422642 0,0,0  1 525, 0,
chr17  42423099  42423225 CAVIN1|NM_012232.6|non-overlapping|GTG 0 -  42423099  42423099 0,0,0  1 126, 0,
chr17  43125317  43125353 BRCA1|NM_007294.4|non-overlapping|CTG 0 -  43125317  43125317 0,0,0  1 36, 0,
chr17  59106633  59106651 TRIM37|NM_015294.6|non-overlapping|ATG 0 -  59106633  59106633 0,0,0  1 18, 0,
chr17  59106633  59106705 TRIM37|NM_015294.6|non-overlapping|CTG 0 -  59106633  59106633 0,0,0  1 72, 0,
chr17  59106798  59106819 TRIM37|NM_015294.6|non-overlapping|CTG 0 -  59106798  59106798 0,0,0  1 21, 0,
chr17  59700028  59700052 PTRH2|NM_001015509.3|non-overlapping|ATG 0 -  59700028  59700028 0,0,0  1 24, 0,
chr17  59700131  59700167 PTRH2|NM_001015509.3|non-overlapping|ATG 0 -  59700131  59700131 0,0,0  1 36, 0,
chr17  59700131  59707417 PTRH2|NM_001015509.3|non-overlapping|CTG 0 -  59700131  59700131 0,0,0  2 58,47, 0,7239,
chr17  63728388  63728397 STRADA|NM_001003787.4|non-overlapping|CTG 0 -  63728388  63728388 0,0,0  1 9, 0,
chr17  63728388  63741763 STRADA|NM_001003787.4|non-overlapping|CTG 0 -  63728388  63728388 0,0,0  2 25,23, 0,13352,
chr17  63766171  63773439 CCDC47|NM_020198.3|overlapping|CTG 0 -  63766171  63766171 0,0,0  2 23,28, 0,7240,
chr17  63766171  63773499 CCDC47|NM_020198.3|overlapping|ATC 0 -  63766171  63766171 0,0,0  2 23,88, 0,7240,
chr17  63773527  63773542 CCDC47|NM_020198.3|non-overlapping|CTG 0 -  63773527  63773527 0,0,0  1 15, 0,
chr17  63837210  63842732 SMARCD2|NM_001098426.2|overlapping|GTG 0 -  63837210  63837210 0,0,0  3 27,185,274, 0,230,5248,
chr17  63842631  63842769 SMARCD2|NM_001098426.2|overlapping|ATC 0 -  63842631  63842631 0,0,0  1 138, 0,
chr17  63842631  63842775 SMARCD2|NM_001098426.2|overlapping|ATT 0 -  63842631  63842631 0,0,0  1 144, 0,
chr17  63842815  63842824 SMARCD2|NM_001098426.2|non-overlapping|TTG 0 -  63842815  63842815 0,0,0  1 9, 0,
chr17  63842631  63842859 SMARCD2|NM_001098426.2|overlapping|CTG 0 -  63842631  63842631 0,0,0  1 228, 0,
chr17  75286750  75286792 SLC25A19|NM_021734.5|overlapping|ATG 0 -  75286750  75286750 0,0,0  1 42, 0,
chr17  75288421  75288436 SLC25A19|NM_021734.5|non-overlapping|ATG 0 -  75288421  75288421 0,0,0  1 15, 0,
chr17  75288421  75289412 SLC25A19|NM_021734.5|non-overlapping|CTG 0 -  75288421  75288421 0,0,0  2 40,59, 0,932,
chr17  75978656  75979125 ACOX1|NM_004035.7|overlapping|TTG 0 -  75978656  75978656 0,0,0  2 37,161, 0,308,
chr17  78997758  78997773 CANT1|NM_138793.4|non-overlapping|ATG 0 -  78997758  78997758 0,0,0  1 15, 0,
chr17  78997788  78997845 CANT1|NM_138793.4|non-overlapping|ATG 0 -  78997788  78997788 0,0,0  1 57, 0,
chr17  78997819  78997939 CANT1|NM_138793.4|non-overlapping|ATG 0 -  78997819  78997819 0,0,0  1 120, 0,
chr17  78997877  79009694 CANT1|NM_138793.4|non-overlapping|ATC 0 -  78997877  78997877 0,0,0  2 86,31, 0,11786,
chr17  80146891  80146987 EIF4A3|NM_014740.4|overlapping|CTG 0 -  80146891  80146891 0,0,0  1 96, 0,
chr17  82648367  82648379 WDR45B|NM_019613.4|non-overlapping|ATG 0 -  82648367  82648367 0,0,0  1 12, 0,
chr18  23586408  23586414 NPC1|NM_000271.5|non-overlapping|AAG 0 -  23586408  23586408 0,0,0  1 6, 0,
chr18  31102296  31102380 DSC2|NM_024422.6|non-overlapping|CTG 0 -  31102296  31102296 0,0,0  1 84, 0,
chr18  31102386  31102407 DSC2|NM_024422.6|non-overlapping|CTG 0 -  31102386  31102386 0,0,0  1 21, 0,
chr18  47157482  47176347 IER3IP1|NM_016097.5|overlapping|GTG 0 -  47157482  47157482 0,0,0  2 55,161, 0,18704,
chr18  49430421  49430433 DYM|NM_017653.6|non-overlapping|ATG 0 -  49430421  49430421 0,0,0  1 12, 0,
chr18  49460516  49460528 DYM|NM_017653.6|non-overlapping|ATG 0 -  49460516  49460516 0,0,0  1 12, 0,
chr18  49460516  49460576 DYM|NM_017653.6|non-overlapping|CTG 0 -  49460516  49460516 0,0,0  1 60, 0,
chr18  49430402  49460598 DYM|NM_017653.6|non-overlapping|CTG 0 -  49430402  49430402 0,0,0  2 45,201, 0,29995,
chr18  49430402  49460625 DYM|NM_017653.6|non-overlapping|CTG 0 -  49430402  49430402 0,0,0  2 45,228, 0,29995,
chr18  50194844  50194874 MYO5B|NM_001080467.3|non-overlapping|ATG 0 -  50194844  50194844 0,0,0  1 30, 0,
chr18  50055323  50194903 MYO5B|NM_001080467.3|overlapping|ATC 0 -  50055323  50055323 0,0,0  2 55,137, 0,139443,
chr18  50055323  50195002 MYO5B|NM_001080467.3|overlapping|CTG 0 -  50055323  50055323 0,0,0  2 55,236, 0,139443,
chr18  50055355  50195016 MYO5B|NM_001080467.3|overlapping|CTG 0 -  50055355  50055355 0,0,0  2 23,250, 0,139411,
chr18  57573342  57586631 FECH|NM_000140.5|overlapping|CTG 0 -  57573342  57573342 0,0,0  3 23,127,78, 0,6730,13211,
chr18  57573342  57586673 FECH|NM_000140.5|overlapping|CTG 0 -  57573342  57573342 0,0,0  3 23,127,120, 0,6730,13211,
chr18  57573342  57586685 FECH|NM_000140.5|overlapping|CTG 0 -  57573342  57573342 0,0,0  3 23,127,132, 0,6730,13211,
chr18  62163622  62163646 PIGN|NM_176787.5|non-overlapping|ATG 0 -  62163622  62163622 0,0,0  1 24, 0,
chr18  62186859  62186916 PIGN|NM_176787.5|non-overlapping|ATG 0 -  62186859  62186859 0,0,0  1 57, 0,
chr18  62186859  62186958 PIGN|NM_176787.5|non-overlapping|ATC 0 -  62186859  62186859 0,0,0  1 99, 0,
chr18  62186974  62186983 PIGN|NM_176787.5|non-overlapping|GTG 0 -  62186974  62186974 0,0,0  1 9, 0,
chr18  63362815  63367203 KDSR|NM_002035.4|overlapping|ATT 0 -  63362815  63362815 0,0,0  2 53,193, 0,4195,
chr18  74291847  74291961 CYB5A|NM_001914.4|overlapping|ATG 0 -  74291847  74291847 0,0,0  1 114, 0,
chr18  79977696  79988444 TXNL4A|NM_006701.5|overlapping|CTG 0 -  79977696  79977696 0,0,0  2 5,205, 0,10543,
chr18  79988466  79988499 TXNL4A|NM_006701.5|non-overlapping|GTG 0 -  79988466  79988466 0,0,0  1 33, 0,
chr18  79988466  79988508 TXNL4A|NM_006701.5|non-overlapping|ATT 0 -  79988466  79988466 0,0,0  1 42, 0,
chr18  79977696  79988549 TXNL4A|NM_006701.5|overlapping|GTG 0 -  79977696  79977696 0,0,0  2 5,310, 0,10543,
chr19   2151254   2151464 AP3D1|NM_001261826.3|overlapping|CTG 0 -   2151254   2151254 0,0,0  1 210, 0,
chr19   2151254   2151482 AP3D1|NM_001261826.3|overlapping|TTG 0 -   2151254   2151254 0,0,0  1 228, 0,
chr19   2151254   2151548 AP3D1|NM_001261826.3|overlapping|ATT 0 -   2151254   2151254 0,0,0  1 294, 0,
chr19   5679358   5680502 MICOS13|NM_205767.3|overlapping|GTG 0 -   5679358   5679358 0,0,0  3 38,178,45, 0,227,1099,
chr19   5719804   5720143 LONP1|NM_004793.4|overlapping|ATG 0 -   5719804   5719804 0,0,0  1 339, 0,
chr19   5896991   5903746 NDUFA11|NM_175614.5|overlapping|CTG 0 -   5896991   5896991 0,0,0  2 6,135, 0,6620,
chr19   6591022   6591031 CD70|NM_001252.5|non-overlapping|CTG 0 -   6591022   6591022 0,0,0  1 9, 0,
chr19   6591022   6591121 CD70|NM_001252.5|non-overlapping|TTG 0 -   6591022   6591022 0,0,0  1 99, 0,
chr19   6591125   6591137 CD70|NM_001252.5|non-overlapping|CTG 0 -   6591125   6591125 0,0,0  1 12, 0,
chr19   7293948   7294095 INSR|NM_000208.4|non-overlapping|ATT 0 -   7293948   7293948 0,0,0  1 147, 0,
chr19  10224913  10224934 S1PR2|NM_004230.4|non-overlapping|ATG 0 -  10224913  10224913 0,0,0  1 21, 0,
chr19  10231207  10231264 S1PR2|NM_004230.4|non-overlapping|CTG 0 -  10231207  10231207 0,0,0  1 57, 0,
chr19  10379706  10379721 TYK2|NM_003331.5|non-overlapping|ATG 0 -  10379706  10379706 0,0,0  1 15, 0,
chr19  10379647  10379758 TYK2|NM_003331.5|non-overlapping|ATG 0 -  10379647  10379647 0,0,0  1 111, 0,
chr19  10379767  10380418 TYK2|NM_003331.5|non-overlapping|ATG 0 -  10379767  10379767 0,0,0  2 12,39, 0,612,
chr19  10379759  10380428 TYK2|NM_003331.5|non-overlapping|CTG 0 -  10379759  10379759 0,0,0  2 20,49, 0,620,
chr19  10379759  10380446 TYK2|NM_003331.5|non-overlapping|CTG 0 -  10379759  10379759 0,0,0  2 20,67, 0,620,
chr19  11194519  11194543 KANK2|NM_001136191.3|non-overlapping|GTG 0 -  11194519  11194519 0,0,0  1 24, 0,
chr19  11194539  11195645 KANK2|NM_001136191.3|non-overlapping|ACG 0 -  11194539  11194539 0,0,0  2 51,24, 0,1082,
chr19  11194558  11195670 KANK2|NM_001136191.3|non-overlapping|TTG 0 -  11194558  11194558 0,0,0  2 32,49, 0,1063,
chr19  11194539  11195738 KANK2|NM_001136191.3|non-overlapping|GTG 0 -  11194539  11194539 0,0,0  2 51,117, 0,1082,
chr19  11194558  11195766 KANK2|NM_001136191.3|non-overlapping|ACG 0 -  11194558  11194558 0,0,0  2 32,145, 0,1063,
chr19  11194586  11195788 KANK2|NM_001136191.3|non-overlapping|GTG 0 -  11194586  11194586 0,0,0  2 4,167, 0,1035,
chr19  13116340  13116406 TRMT1|NM_001136035.4|overlapping|ATG 0 -  13116340  13116340 0,0,0  1 66, 0,
chr19  13104934  13116668 TRMT1|NM_001136035.4|CDS_extension|GTG 0 -  13104934  13104934 0,0,0 17 147,130,120,77,109,86,135,70,87,149,113,116,188,143,56,286,16, 0,332,552,2639,2816,4446,4615,4834,4980,5223,7770,7961,10344,10691,11062,11211,11718,
chr19  13116704  13116713 TRMT1|NM_001136035.4|non-overlapping|AGG 0 -  13116704  13116704 0,0,0  1 9, 0,
chr19  13116704  13116725 TRMT1|NM_001136035.4|non-overlapping|ATG 0 -  13116704  13116704 0,0,0  1 21, 0,
chr19  18599834  18606712 CRLF1|NM_004750.5|overlapping|CTG 0 -  18599834  18599834 0,0,0  2 12,171, 0,6707,
chr19  36008705  36008723 SYNE4|NM_001039876.3|non-overlapping|CTG 0 -  36008705  36008705 0,0,0  1 18, 0,
chr19  36007240  36008755 SYNE4|NM_001039876.3|overlapping|CTG 0 -  36007240  36007240 0,0,0  3 28,151,202, 0,976,1313,
chr19  40716608  40716680 COQ8B|NM_024876.4|non-overlapping|TTG 0 -  40716608  40716608 0,0,0  1 72, 0,
chr19  40716608  40716770 COQ8B|NM_024876.4|non-overlapping|ATG 0 -  40716608  40716608 0,0,0  1 162, 0,
chr19  40716796  40716859 COQ8B|NM_024876.4|non-overlapping|ATG 0 -  40716796  40716796 0,0,0  1 63, 0,
chr19  41363974  41364013 B9D2|NM_030578.4|non-overlapping|ATG 0 -  41363974  41363974 0,0,0  1 39, 0,
chr19  41364009  41364051 B9D2|NM_030578.4|non-overlapping|CTG 0 -  41364009  41364009 0,0,0  1 42, 0,
chr19  41363974  41364127 B9D2|NM_030578.4|non-overlapping|ACG 0 -  41363974  41363974 0,0,0  1 153, 0,
chr19  41363974  41364139 B9D2|NM_030578.4|non-overlapping|ACG 0 -  41363974  41363974 0,0,0  1 165, 0,
chr19  43575459  43575486 XRCC1|NM_006297.3|non-overlapping|CTG 0 -  43575459  43575459 0,0,0  1 27, 0,
chr19  43750733  43754702 SMG9|NM_019108.4|overlapping|ACG 0 -  43750733  43750733 0,0,0  2 14,49, 0,3920,
chr19  43754653  43754743 SMG9|NM_019108.4|non-overlapping|GTG 0 -  43754653  43754653 0,0,0  1 90, 0,
chr19  43754653  43754755 SMG9|NM_019108.4|non-overlapping|ATT 0 -  43754653  43754653 0,0,0  1 102, 0,
chr19  43750733  43754771 SMG9|NM_019108.4|overlapping|CTG 0 -  43750733  43750733 0,0,0  2 14,118, 0,3920,
chr19  43750743  43754799 SMG9|NM_019108.4|non-overlapping|GTG 0 -  43750743  43750743 0,0,0  2 4,146, 0,3910,
chr19  43750733  43754837 SMG9|NM_019108.4|overlapping|CTG 0 -  43750733  43750733 0,0,0  2 14,184, 0,3920,
chr19  43754653  43754905 SMG9|NM_019108.4|non-overlapping|CTG 0 -  43754653  43754653 0,0,0  1 252, 0,
chr19  43754653  43754932 SMG9|NM_019108.4|non-overlapping|ATG 0 -  43754653  43754653 0,0,0  1 279, 0,
chr19  45423421  45423433 ERCC1|NM_202001.3|non-overlapping|ATG 0 -  45423421  45423421 0,0,0  1 12, 0,
chr19  45423454  45423490 ERCC1|NM_202001.3|non-overlapping|ATG 0 -  45423454  45423454 0,0,0  1 36, 0,
chr19  46412856  46413144 CCDC8|NM_032040.5|non-overlapping|CTG 0 -  46412856  46412856 0,0,0  1 288, 0,
chr19  46413136  46413235 CCDC8|NM_032040.5|non-overlapping|ATT 0 -  46413136  46413136 0,0,0  1 99, 0,
chr19  46413136  46413241 CCDC8|NM_032040.5|non-overlapping|CTG 0 -  46413136  46413136 0,0,0  1 105, 0,
chr19  46413230  46413317 CCDC8|NM_032040.5|non-overlapping|CTG 0 -  46413230  46413230 0,0,0  1 87, 0,
chr19  46413230  46413419 CCDC8|NM_032040.5|non-overlapping|CTG 0 -  46413230  46413230 0,0,0  1 189, 0,
chr19  46413280  46413514 CCDC8|NM_032040.5|non-overlapping|CTG 0 -  46413280  46413280 0,0,0  1 234, 0,
chr19  46413429  46413543 CCDC8|NM_032040.5|non-overlapping|CTG 0 -  46413429  46413429 0,0,0  1 114, 0,
chr19  47484165  47484177 KPTN|NM_007059.4|non-overlapping|GTG 0 -  47484165  47484165 0,0,0  1 12, 0,
chr19  48751009  48752566 FUT1|NM_000148.4|overlapping|ATG 0 -  48751009  48751009 0,0,0  2 274,77, 0,1480,
chr19  48751235  48752588 FUT1|NM_000148.4|overlapping|CTG 0 -  48751235  48751235 0,0,0  2 48,99, 0,1254,
chr19  48752596  48752629 FUT1|NM_000148.4|non-overlapping|CTG 0 -  48752596  48752596 0,0,0  1 33, 0,
chr19  48752873  48752918 FUT1|NM_000148.4|non-overlapping|ATG 0 -  48752873  48752873 0,0,0  1 45, 0,
chr19  48993102  48993183 GYS1|NM_002103.5|overlapping|CTG 0 -  48993102  48993102 0,0,0  1 81, 0,
chr19  48993102  48993246 GYS1|NM_002103.5|overlapping|ATA 0 -  48993102  48993102 0,0,0  1 144, 0,
chr19  49861247  49867491 PNKP|NM_007254.4|CDS_extension|GTG 0 -  49861247  49861247 0,0,0 17 118,62,88,110,62,97,93,71,49,72,108,58,80,300,47,164,23, 0,201,360,524,796,937,1123,1290,1442,2441,2716,2931,3076,3879,5151,5806,6221,
chr19  49861247  49867497 PNKP|NM_007254.4|CDS_extension|GTG 0 -  49861247  49861247 0,0,0 17 118,62,88,110,62,97,93,71,49,72,108,58,80,300,47,164,29, 0,201,360,524,796,937,1123,1290,1442,2441,2716,2931,3076,3879,5151,5806,6221,
chr19  49909793  49909847 NUP62|NM_153719.4|overlapping|TTG 0 -  49909793  49909793 0,0,0  1 54, 0,
chr19  49909831  49909858 NUP62|NM_153719.4|non-overlapping|ACG 0 -  49909831  49909831 0,0,0  1 27, 0,
chr19  49909831  49909870 NUP62|NM_153719.4|non-overlapping|CTG 0 -  49909831  49909831 0,0,0  1 39, 0,
chr19  49929358  49929397 NUP62|NM_153719.4|non-overlapping|ATG 0 -  49929358  49929358 0,0,0  1 39, 0,
chr19  54189470  54189491 MBOAT7|NM_024298.5|non-overlapping|GTG 0 -  54189470  54189470 0,0,0  1 21, 0,
chr19  54189493  54189571 MBOAT7|NM_024298.5|non-overlapping|CTG 0 -  54189493  54189493 0,0,0  1 78, 0,
chr19  54189493  54189577 MBOAT7|NM_024298.5|non-overlapping|GTG 0 -  54189493  54189493 0,0,0  1 84, 0,
chr19  55157597  55157675 TNNI3|NM_000363.5|non-overlapping|AAG 0 -  55157597  55157597 0,0,0  1 78, 0,
chr19  55157597  55157678 TNNI3|NM_000363.5|non-overlapping|CTG 0 -  55157597  55157597 0,0,0  1 81, 0,
chr20    768447    768471 SLC52A3|NM_033409.4|non-overlapping|ATG 0 -    768447    768447 0,0,0  1 24, 0,
chr20   3204637   3204652 DDRGK1|NM_023935.3|non-overlapping|GTG 0 -   3204637   3204637 0,0,0  1 15, 0,
chr20   3204637   3204661 DDRGK1|NM_023935.3|non-overlapping|GTG 0 -   3204637   3204637 0,0,0  1 24, 0,
chr20   5119706   5119832 PCNA|NM_002592.2|overlapping|CTG 0 -   5119706   5119706 0,0,0  1 126, 0,
chr20   5119692   5119869 PCNA|NM_002592.2|overlapping|CTG 0 -   5119692   5119692 0,0,0  1 177, 0,
chr20   5119692   5119878 PCNA|NM_002592.2|overlapping|CTG 0 -   5119692   5119692 0,0,0  1 186, 0,
chr20   5119874   5119895 PCNA|NM_002592.2|non-overlapping|ACG 0 -   5119874   5119874 0,0,0  1 21, 0,
chr20   6119537   6122801 FERMT1|NM_017671.5|overlapping|CTG 0 -   6119537   6119537 0,0,0  2 35,28, 0,3236,
chr20   6119537   6122831 FERMT1|NM_017671.5|overlapping|ACG 0 -   6119537   6119537 0,0,0  2 35,58, 0,3236,
chr20   6122912   6122948 FERMT1|NM_017671.5|non-overlapping|CTG 0 -   6122912   6122912 0,0,0  1 36, 0,
chr20   6122912   6123005 FERMT1|NM_017671.5|non-overlapping|CTG 0 -   6122912   6122912 0,0,0  1 93, 0,
chr20   6122912   6123134 FERMT1|NM_017671.5|non-overlapping|CTG 0 -   6122912   6122912 0,0,0  1 222, 0,
chr20   6123212   6123245 FERMT1|NM_017671.5|non-overlapping|ATG 0 -   6123212   6123212 0,0,0  1 33, 0,
chr20   6123351   6123393 FERMT1|NM_017671.5|non-overlapping|CTG 0 -   6123351   6123351 0,0,0  1 42, 0,
chr20   6123355   6123511 FERMT1|NM_017671.5|non-overlapping|CTG 0 -   6123355   6123355 0,0,0  1 156, 0,
chr20  10413734  10413887 MKKS|NM_018848.3|non-overlapping|ATG 0 -  10413734  10413734 0,0,0  1 153, 0,
chr20  10420618  10420750 MKKS|NM_018848.3|non-overlapping|ATG 0 -  10420618  10420618 0,0,0  1 132, 0,
chr20  25390699  25390717 ABHD12|NM_001042472.3|overlapping|CTG 0 -  25390699  25390699 0,0,0  1 18, 0,
chr20  25390665  25390755 ABHD12|NM_001042472.3|overlapping|CTG 0 -  25390665  25390665 0,0,0  1 90, 0,
chr20  25390699  25390780 ABHD12|NM_001042472.3|overlapping|GTG 0 -  25390699  25390699 0,0,0  1 81, 0,
chr20  25390811  25390817 ABHD12|NM_001042472.3|non-overlapping|ATG 0 -  25390811  25390811 0,0,0  1 6, 0,
chr20  34295516  34303317 AHCY|NM_000687.4|overlapping|CTG 0 -  34295516  34295516 0,0,0  2 69,75, 0,7726,
chr20  34303313  34303343 AHCY|NM_000687.4|non-overlapping|CTG 0 -  34303313  34303313 0,0,0  1 30, 0,
chr20  34951859  34955779 GSS|NM_000178.4|non-overlapping|CTG 0 -  34951859  34951859 0,0,0  2 1,53, 0,3867,
chr20  45971455  45972140 ZNF335|NM_022095.4|non-overlapping|GTG 0 -  45971455  45971455 0,0,0  2 5,19, 0,666,
chr20  45971455  45972161 ZNF335|NM_022095.4|non-overlapping|ATG 0 -  45971455  45971455 0,0,0  2 5,40, 0,666,
chr20  45971455  45972176 ZNF335|NM_022095.4|non-overlapping|ATG 0 -  45971455  45971455 0,0,0  2 5,55, 0,666,
chr20  54173782  54173791 CYP24A1|NM_000782.5|non-overlapping|ATG 0 -  54173782  54173782 0,0,0  1 9, 0,
chr20  54173900  54173921 CYP24A1|NM_000782.5|non-overlapping|GTG 0 -  54173900  54173900 0,0,0  1 21, 0,
chr21  32612136  32612331 CFAP298|NM_021254.4|overlapping|CTG 0 -  32612136  32612136 0,0,0  1 195, 0,
chr21  32612344  32612374 CFAP298|NM_021254.4|non-overlapping|GTG 0 -  32612344  32612344 0,0,0  1 30, 0,
chr21  32612379  32612427 CFAP298|NM_021254.4|non-overlapping|ATC 0 -  32612379  32612379 0,0,0  1 48, 0,
chr21  32612454  32612469 CFAP298|NM_021254.4|non-overlapping|CTG 0 -  32612454  32612454 0,0,0  1 15, 0,
chr21  32612476  32612521 CFAP298|NM_021254.4|non-overlapping|TTG 0 -  32612476  32612476 0,0,0  1 45, 0,
chr21  32612454  32612565 CFAP298|NM_021254.4|non-overlapping|CTG 0 -  32612454  32612454 0,0,0  1 111, 0,
chr21  36938923  36938977 HLCS|NM_000411.8|non-overlapping|CTG 0 -  36938923  36938923 0,0,0  1 54, 0,
chr21  36946039  36946129 HLCS|NM_000411.8|non-overlapping|ATG 0 -  36946039  36946039 0,0,0  1 90, 0,
chr21  36946039  36962070 HLCS|NM_000411.8|non-overlapping|GTG 0 -  36946039  36946039 0,0,0  2 115,35, 0,15996,
chr21  36946073  36962092 HLCS|NM_000411.8|non-overlapping|ACG 0 -  36946073  36946073 0,0,0  2 81,57, 0,15962,
chr21  37072528  37073023 PIGP|NM_153682.3|non-overlapping|TTG 0 -  37072528  37072528 0,0,0  2 9,24, 0,471,
chr21  37072528  37073044 PIGP|NM_153682.3|non-overlapping|CTG 0 -  37072528  37072528 0,0,0  2 9,45, 0,471,
chr21  37073000  37073096 PIGP|NM_153682.3|non-overlapping|GTG 0 -  37073000  37073000 0,0,0  1 96, 0,
chr21  42879413  42879524 WDR4|NM_033661.5|overlapping|ATG 0 -  42879413  42879413 0,0,0  1 111, 0,
chr21  44339190  44339316 CFAP410|NM_004928.3|overlapping|ATC 0 -  44339190  44339190 0,0,0  1 126, 0,
chr21  44907069  44920863 ITGB2|NM_000211.5|overlapping|ACG 0 -  44907069  44907069 0,0,0  4 26,89,61,43, 0,3214,3655,13751,
chr21  46285319  46285331 MCM3AP|NM_003906.5|non-overlapping|TTG 0 -  46285319  46285319 0,0,0  1 12, 0,
chr21  46285333  46285354 MCM3AP|NM_003906.5|non-overlapping|CTG 0 -  46285333  46285333 0,0,0  1 21, 0,
chr22  17219389  17219404 ADA2|NM_001282225.2|non-overlapping|ATG 0 -  17219389  17219389 0,0,0  1 15, 0,
chr22  17619522  17628664 ATP6V1E1|NM_001696.4|overlapping|CTG 0 -  17619522  17619522 0,0,0  2 4,62, 0,9080,
chr22  20858724  20858790 PI4KA|NM_058004.4|non-overlapping|CTG 0 -  20858724  20858724 0,0,0  1 66, 0,
chr22  26481995  26482043 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26481995  26481995 0,0,0  1 48, 0,
chr22  26482062  26482131 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26482062  26482062 0,0,0  1 69, 0,
chr22  26482167  26482182 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26482167  26482167 0,0,0  1 15, 0,
chr22  26482167  26482227 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26482167  26482167 0,0,0  1 60, 0,
chr22  26482226  26483689 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26482226  26482226 0,0,0  2 14,16, 0,1447,
chr22  26482219  26483736 HPS4|NM_022081.6|non-overlapping|CTG 0 -  26482219  26482219 0,0,0  2 21,63, 0,1454,
chr22  36775700  36775745 IFT27|NM_006860.5|overlapping|TTG 0 -  36775700  36775700 0,0,0  1 45, 0,
chr22  36775835  36775934 IFT27|NM_006860.5|non-overlapping|CTG 0 -  36775835  36775835 0,0,0  1 99, 0,
chr22  36775835  36775964 IFT27|NM_006860.5|non-overlapping|CTG 0 -  36775835  36775835 0,0,0  1 129, 0,
chr22  36775828  36776011 IFT27|NM_006860.5|non-overlapping|CTG 0 -  36775828  36775828 0,0,0  1 183, 0,
chr22  36776069  36776108 IFT27|NM_006860.5|non-overlapping|ATG 0 -  36776069  36776069 0,0,0  1 39, 0,
chr22  38169353  38181680 PLA2G6|NM_003560.4|overlapping|GTG 0 -  38169353  38169353 0,0,0  2 118,17, 0,12310,
chr22  38779597  38782742 DNAL4|NM_005740.3|overlapping|GTG 0 -  38779597  38779597 0,0,0  3 16,84,80, 0,1328,3065,
chr22  38779597  38782751 DNAL4|NM_005740.3|overlapping|GTG 0 -  38779597  38779597 0,0,0  3 16,84,89, 0,1328,3065,
chr22  38782792  38794118 DNAL4|NM_005740.3|non-overlapping|CTG 0 -  38782792  38782792 0,0,0  2 78,51, 0,11275,
chr22  42070287  42070350 NAGA|NM_000262.3|overlapping|CTG 0 -  42070287  42070287 0,0,0  1 63, 0,
chr22  42070400  42070532 NAGA|NM_000262.3|non-overlapping|TTG 0 -  42070400  42070400 0,0,0  1 132, 0,
chr22  42070552  42070567 NAGA|NM_000262.3|non-overlapping|CTG 0 -  42070552  42070552 0,0,0  1 15, 0,
chr22  42070615  42070633 NAGA|NM_000262.3|non-overlapping|GTG 0 -  42070615  42070615 0,0,0  1 18, 0,
chr22  42070545  42070680 NAGA|NM_000262.3|non-overlapping|CTG 0 -  42070545  42070545 0,0,0  1 135, 0,
chr22  42070545  42070695 NAGA|NM_000262.3|non-overlapping|CTG 0 -  42070545  42070545 0,0,0  1 150, 0,
chr22  42070753  42070774 NAGA|NM_000262.3|non-overlapping|CTG 0 -  42070753  42070753 0,0,0  1 21, 0,
chr22  49913780  49918310 ALG12|NM_024105.4|non-overlapping|CTG 0 -  49913780  49913780 0,0,0  2 63,48, 0,4482,
chr22  49913820  49918326 ALG12|NM_024105.4|non-overlapping|CTG 0 -  49913820  49913820 0,0,0  2 23,64, 0,4442,
chr22  49913704  49918345 ALG12|NM_024105.4|overlapping|CTG 0 -  49913704  49913704 0,0,0  2 139,83, 0,4558,
chr22  49913704  49918354 ALG12|NM_024105.4|overlapping|ATT 0 -  49913704  49913704 0,0,0  2 139,92, 0,4558,
chr22  49913820  49918371 ALG12|NM_024105.4|non-overlapping|TTG 0 -  49913820  49913820 0,0,0  2 23,109, 0,4442,
chr22  50244634  50244706 TUBGCP6|NM_020461.4|non-overlapping|CTG 0 -  50244634  50244634 0,0,0  1 72, 0,
chr22  50244741  50244753 TUBGCP6|NM_020461.4|non-overlapping|GTG 0 -  50244741  50244741 0,0,0  1 12, 0,
chr22  50244749  50244761 TUBGCP6|NM_020461.4|non-overlapping|ACG 0 -  50244749  50244749 0,0,0  1 12, 0,
chr22  50244749  50244869 TUBGCP6|NM_020461.4|non-overlapping|GTG 0 -  50244749  50244749 0,0,0  1 120, 0,
chr22  50474910  50475012 SBF1|NM_002972.4|non-overlapping|ATG 0 -  50474910  50474910 0,0,0  1 102, 0,
chr22  50525490  50525574 SCO2|NM_005138.3|non-overlapping|GTG 0 -  50525490  50525490 0,0,0  1 84, 0,
chr22  50525490  50525586 SCO2|NM_005138.3|non-overlapping|CTG 0 -  50525490  50525490 0,0,0  1 96, 0,
chr22  50529659  50529945 TYMP|NM_001953.5|overlapping|CTG 0 -  50529659  50529659 0,0,0  2 60,42, 0,244,
chr22  50525769  50529950 TYMP|NM_001953.5|CDS_extension|CTG 0 -  50525769  50525769 0,0,0 10 149,141,231,163,119,130,99,203,224,47, 0,231,476,806,1395,1818,2742,3366,3726,4134,
chr22  50529659  50529990 TYMP|NM_001953.5|overlapping|CTG 0 -  50529659  50529659 0,0,0  2 60,87, 0,244,
chr22  50627697  50627826 ARSA|NM_000487.6|overlapping|CTG 0 -  50627697  50627697 0,0,0  1 129, 0,
chr22  50627555  50627996 ARSA|NM_000487.6|overlapping|CTG 0 -  50627555  50627555 0,0,0  1 441, 0,
chr22  50627555  50628017 ARSA|NM_000487.6|overlapping|ATC 0 -  50627555  50627555 0,0,0  1 462, 0,
chr22  50628026  50628044 ARSA|NM_000487.6|non-overlapping|CTG 0 -  50628026  50628026 0,0,0  1 18, 0,
chr22  50628059  50628077 ARSA|NM_000487.6|non-overlapping|CTG 0 -  50628059  50628059 0,0,0  1 18, 0,
chr22  50628101  50628116 ARSA|NM_000487.6|non-overlapping|CTG 0 -  50628101  50628101 0,0,0  1 15, 0,
chrX  10567549  10620319 MID1|NM_000381.4|non-overlapping|ATG 0 -  10567549  10567549 0,0,0  2 54,30, 0,52740,
chrX  10567549  10620340 MID1|NM_000381.4|non-overlapping|ATG 0 -  10567549  10567549 0,0,0  2 54,51, 0,52740,
chrX  10567549  10620364 MID1|NM_000381.4|non-overlapping|CTG 0 -  10567549  10567549 0,0,0  2 54,75, 0,52740,
chrX  10620360  10620375 MID1|NM_000381.4|non-overlapping|GTG 0 -  10620360  10620360 0,0,0  1 15, 0,
chrX  10620360  10620387 MID1|NM_000381.4|non-overlapping|CTG 0 -  10620360  10620360 0,0,0  1 27, 0,
chrX  10620360  10620408 MID1|NM_000381.4|non-overlapping|TTG 0 -  10620360  10620360 0,0,0  1 48, 0,
chrX  10620360  10620441 MID1|NM_000381.4|non-overlapping|ACG 0 -  10620360  10620360 0,0,0  1 81, 0,
chrX  10620360  10620447 MID1|NM_000381.4|non-overlapping|ACG 0 -  10620360  10620360 0,0,0  1 87, 0,
chrX  10567549  10620463 MID1|NM_000381.4|non-overlapping|ATC 0 -  10567549  10567549 0,0,0  2 54,174, 0,52740,
chrX  10620419  10620479 MID1|NM_000381.4|non-overlapping|GTG 0 -  10620419  10620419 0,0,0  1 60, 0,
chrX  10620469  10620493 MID1|NM_000381.4|non-overlapping|TTG 0 -  10620469  10620469 0,0,0  1 24, 0,
chrX  10620469  10620499 MID1|NM_000381.4|non-overlapping|TTG 0 -  10620469  10620469 0,0,0  1 30, 0,
chrX  10620469  10620523 MID1|NM_000381.4|non-overlapping|CTG 0 -  10620469  10620469 0,0,0  1 54, 0,
chrX  13734045  13734102 TRAPPC2|NM_001011658.4|non-overlapping|TTG 0 -  13734045  13734045 0,0,0  1 57, 0,
chrX  13734045  13734600 TRAPPC2|NM_001011658.4|non-overlapping|CTG 0 -  13734045  13734045 0,0,0  2 140,76, 0,479,
chrX  14865537  14868969 FANCB|NM_001018113.3|non-overlapping|ATG 0 -  14865537  14865537 0,0,0  2 43,47, 0,3385,
chrX  14868940  14868991 FANCB|NM_001018113.3|non-overlapping|ATG 0 -  14868940  14868940 0,0,0  1 51, 0,
chrX  14872986  14873004 FANCB|NM_001018113.3|non-overlapping|ATG 0 -  14872986  14872986 0,0,0  1 18, 0,
chrX  14868940  14873035 FANCB|NM_001018113.3|non-overlapping|ATG 0 -  14868940  14868940 0,0,0  2 103,50, 0,4045,
chrX  18954377  18984029 PHKA2|NM_000292.3|overlapping|GTG 0 -  18954377  18954377 0,0,0  2 35,175, 0,29477,
chrX  18954377  18984098 PHKA2|NM_000292.3|overlapping|TTG 0 -  18954377  18954377 0,0,0  2 35,244, 0,29477,
chrX  24024878  24024899 KLHL15|NM_030624.3|non-overlapping|ATG 0 -  24024878  24024878 0,0,0  1 21, 0,
chrX  24024975  24025041 KLHL15|NM_030624.3|non-overlapping|CTG 0 -  24024975  24024975 0,0,0  1 66, 0,
chrX  38327440  38327485 RPGR|NM_001034853.2|non-overlapping|ATG 0 -  38327440  38327440 0,0,0  1 45, 0,
chrX  53224935  53224947 KDM5C|NM_004187.5|non-overlapping|ATG 0 -  53224935  53224935 0,0,0  1 12, 0,
chrX  53225024  53225063 KDM5C|NM_004187.5|non-overlapping|CTG 0 -  53225024  53225024 0,0,0  1 39, 0,
chrX  53225059  53225101 KDM5C|NM_004187.5|non-overlapping|ACG 0 -  53225059  53225059 0,0,0  1 42, 0,
chrX  53225154  53225181 KDM5C|NM_004187.5|non-overlapping|CTG 0 -  53225154  53225154 0,0,0  1 27, 0,
chrX  53225154  53225196 KDM5C|NM_004187.5|non-overlapping|ATG 0 -  53225154  53225154 0,0,0  1 42, 0,
chrX  54043839  54043857 PHF8|NM_015107.3|non-overlapping|ATG 0 -  54043839  54043839 0,0,0  1 18, 0,
chrX  54043853  54043907 PHF8|NM_015107.3|non-overlapping|GTG 0 -  54043853  54043853 0,0,0  1 54, 0,
chrX  54044340  54044406 PHF8|NM_015107.3|non-overlapping|ATG 0 -  54044340  54044340 0,0,0  1 66, 0,
chrX  54044399  54044450 PHF8|NM_015107.3|non-overlapping|ATG 0 -  54044399  54044399 0,0,0  1 51, 0,
chrX  54495559  54495673 FGD1|NM_004463.3|non-overlapping|ATG 0 -  54495559  54495559 0,0,0  1 114, 0,
chrX  54495559  54495748 FGD1|NM_004463.3|non-overlapping|ATA 0 -  54495559  54495559 0,0,0  1 189, 0,
chrX  54495777  54495816 FGD1|NM_004463.3|non-overlapping|GTG 0 -  54495777  54495777 0,0,0  1 39, 0,
chrX  54495559  54495853 FGD1|NM_004463.3|non-overlapping|TTG 0 -  54495559  54495559 0,0,0  1 294, 0,
chrX  54495578  54495881 FGD1|NM_004463.3|non-overlapping|ATT 0 -  54495578  54495578 0,0,0  1 303, 0,
chrX  54495578  54495920 FGD1|NM_004463.3|non-overlapping|ACG 0 -  54495578  54495578 0,0,0  1 342, 0,
chrX  54496045  54496129 FGD1|NM_004463.3|non-overlapping|CTG 0 -  54496045  54496045 0,0,0  1 84, 0,
chrX  54495578  54496214 FGD1|NM_004463.3|non-overlapping|GTG 0 -  54495578  54495578 0,0,0  1 636, 0,
chrX  63754317  63754332 ARHGEF9|NM_015185.3|non-overlapping|ATG 0 -  63754317  63754317 0,0,0  1 15, 0,
chrX  63754484  63754580 ARHGEF9|NM_015185.3|non-overlapping|ATG 0 -  63754484  63754484 0,0,0  1 96, 0,
chrX  63754484  63754664 ARHGEF9|NM_015185.3|non-overlapping|ATG 0 -  63754484  63754484 0,0,0  1 180, 0,
chrX  63754825  63754855 ARHGEF9|NM_015185.3|non-overlapping|CTG 0 -  63754825  63754825 0,0,0  1 30, 0,
chrX  63754734  63754875 ARHGEF9|NM_015185.3|non-overlapping|GTG 0 -  63754734  63754734 0,0,0  1 141, 0,
chrX  63754811  63754889 ARHGEF9|NM_015185.3|non-overlapping|ATT 0 -  63754811  63754811 0,0,0  1 78, 0,
chrX  63754811  63754949 ARHGEF9|NM_015185.3|non-overlapping|CTG 0 -  63754811  63754811 0,0,0  1 138, 0,
chrX  63754945  63754993 ARHGEF9|NM_015185.3|non-overlapping|CTG 0 -  63754945  63754945 0,0,0  1 48, 0,
chrX  63754982  63755027 ARHGEF9|NM_015185.3|non-overlapping|ACG 0 -  63754982  63754982 0,0,0  1 45, 0,
chrX  63754982  63755072 ARHGEF9|NM_015185.3|non-overlapping|CTG 0 -  63754982  63754982 0,0,0  1 90, 0,
chrX  64917782  64976398 ZC4H2|NM_018684.4|CDS_extension|GTG 0 -  64917782  64917782 0,0,0  5 114,163,173,172,74, 0,1259,2298,4034,58542,
chrX  65534681  65534732 LAS1L|NM_031206.7|overlapping|CTG 0 -  65534681  65534681 0,0,0  1 51, 0,
chrX  65534681  65534765 LAS1L|NM_031206.7|overlapping|CTG 0 -  65534681  65534681 0,0,0  1 84, 0,
chrX  68433286  68433313 OPHN1|NM_002547.3|non-overlapping|ATG 0 -  68433286  68433286 0,0,0  1 27, 0,
chrX  68433255  68433387 OPHN1|NM_002547.3|non-overlapping|ATT 0 -  68433255  68433255 0,0,0  1 132, 0,
chrX  68433255  68433450 OPHN1|NM_002547.3|non-overlapping|CTG 0 -  68433255  68433255 0,0,0  1 195, 0,
chrX  71111438  71111555 IL2RG|NM_000206.3|overlapping|ATG 0 -  71111438  71111438 0,0,0  1 117, 0,
chrX  80809539  80809623 BRWD3|NM_153252.5|non-overlapping|ATG 0 -  80809539  80809539 0,0,0  1 84, 0,
chrX  80809619  80809643 BRWD3|NM_153252.5|non-overlapping|ATG 0 -  80809619  80809619 0,0,0  1 24, 0,
chrX  80809650  80809659 BRWD3|NM_153252.5|non-overlapping|TTG 0 -  80809650  80809650 0,0,0  1 9, 0,
chrX 101348588 101348669 TIMM8A|NM_004085.4|overlapping|CTG 0 - 101348588 101348588 0,0,0  1 81, 0,
chrX 101348588 101348678 TIMM8A|NM_004085.4|overlapping|TTG 0 - 101348588 101348588 0,0,0  1 90, 0,
chrX 110762758 110795764 CHRDL1|NM_001143981.2|overlapping|ACG 0 - 110762758 110762758 0,0,0  3 49,128,21, 0,29329,32985,
chrX 130165753 130165765 AIFM1|NM_004208.4|non-overlapping|ATG 0 - 130165753 130165753 0,0,0  1 12, 0,
chrX 130165764 130165800 AIFM1|NM_004208.4|non-overlapping|ATG 0 - 130165764 130165764 0,0,0  1 36, 0,
chrX 133953136 133985490 GPC3|NM_004484.4|overlapping|CTG 0 - 133953136 133953136 0,0,0  2 75,216, 0,32138,
chrX 133953136 133985505 GPC3|NM_004484.4|overlapping|CTG 0 - 133953136 133953136 0,0,0  2 75,231, 0,32138,
chrX 133953136 133985511 GPC3|NM_004484.4|overlapping|CTG 0 - 133953136 133953136 0,0,0  2 75,237, 0,32138,
chrX 133953136 133985553 GPC3|NM_004484.4|overlapping|ACG 0 - 133953136 133953136 0,0,0  2 75,279, 0,32138,
chrX 133953136 133985565 GPC3|NM_004484.4|overlapping|CTG 0 - 133953136 133953136 0,0,0  2 75,291, 0,32138,
chrX 136879324 136880626 RBMX|NM_002139.4|overlapping|TTG 0 - 136879324 136879324 0,0,0  2 129,30, 0,1272,
chrX 136880648 136880711 RBMX|NM_002139.4|non-overlapping|GTG 0 - 136880648 136880648 0,0,0  1 63, 0,
chrX 149505195 149505243 IDS|NM_000202.8|non-overlapping|ATG 0 - 149505195 149505195 0,0,0  1 48, 0,
chrX 153723240 153723267 BCAP31|NM_001139441.1|overlapping|GTG 0 - 153723240 153723240 0,0,0  1 27, 0,
chrX 153873238 153875882 L1CAM|NM_000425.5|overlapping|CTG 0 - 153873238 153873238 0,0,0  2 4,122, 0,2522,
chrX 153970951 153970987 HCFC1|NM_005334.3|non-overlapping|ATG 0 - 153970951 153970951 0,0,0  1 36, 0,
chrX 153971136 153971172 HCFC1|NM_005334.3|non-overlapping|ATG 0 - 153971136 153971136 0,0,0  1 36, 0,
chrX 153971338 153971365 HCFC1|NM_005334.3|non-overlapping|ATG 0 - 153971338 153971338 0,0,0  1 27, 0,
chrX 153971557 153971590 HCFC1|NM_005334.3|non-overlapping|ATG 0 - 153971557 153971557 0,0,0  1 33, 0,
chrX 153971731 153971788 HCFC1|NM_005334.3|non-overlapping|ATG 0 - 153971731 153971731 0,0,0  1 57, 0,
chrX 153971784 153971811 HCFC1|NM_005334.3|non-overlapping|ATG 0 - 153971784 153971784 0,0,0  1 27, 0,
chrX 154478877 154479063 LAGE3|NM_006014.4|overlapping|ACG 0 - 154478877 154478877 0,0,0  1 186, 0,
chrX 154478877 154479114 LAGE3|NM_006014.4|overlapping|CTG 0 - 154478877 154478877 0,0,0  1 237, 0,
chrX 154478877 154479141 LAGE3|NM_006014.4|overlapping|CTG 0 - 154478877 154478877 0,0,0  1 264, 0,
chrX 154478959 154479175 LAGE3|NM_006014.4|non-overlapping|CTG 0 - 154478959 154478959 0,0,0  1 216, 0,
chrX 154478877 154479198 LAGE3|NM_006014.4|overlapping|GTG 0 - 154478877 154478877 0,0,0  1 321, 0,
chrX 155264379 155264400 RAB39B|NM_171998.4|non-overlapping|ATG 0 - 155264379 155264379 0,0,0  1 21, 0,
chrX 155264379 155264460 RAB39B|NM_171998.4|non-overlapping|ATC 0 - 155264379 155264379 0,0,0  1 81, 0,
chrX 155612812 155612833 TMLHE|NM_018196.4|non-overlapping|CTG 0 - 155612812 155612812 0,0,0  1 21, 0,
chrX 155545224 155612864 TMLHE|NM_018196.4|overlapping|CTG 0 - 155545224 155545224 0,0,0  2 53,73, 0,67567,
chr1   1013546   1014478 ISG15|NM_005101.4|CDS_extension|GTG 0 +   1013546   1013546 0,0,0  2 30,495, 0,437,
chr1   8318163   8324333 SLC45A1|NM_001080397.3|overlapping|ATG 0 +   8318163   8318163 0,0,0  2 23,28, 0,6142,
chr1  32200684  32205248 CCDC28B|NM_024296.5|CDS_extension|ATC 0 +  32200684  32200684 0,0,0  6 25,187,167,194,23,55, 0,1228,3194,3501,3913,4509,
chr1  32274368  32285716 LCK|NM_001042771.3|CDS_truncation|ATG 0 +  32274368  32274368 0,0,0 12 66,82,91,99,104,150,153,180,77,154,132,203, 0,368,624,952,1200,1545,1968,2238,5302,5472,5710,11145,
chr1  40979794  41010245 CTPS1|NM_001905.4|CDS_extension|CTG 0 +  40979794  40979794 0,0,0 18 35,179,171,101,117,84,81,152,133,89,95,63,44,97,56,97,145,85, 0,3483,5026,7577,8799,11370,11970,16122,17599,21234,22365,23319,26256,27654,28864,28999,29650,30366,
chr1  43389923  43450480 SZT2|NM_015284.4|CDS_extension|GTG 0 +  43389923  43389923 0,0,0 71 72,126,174,171,132,142,107,211,171,235,130,143,153,115,218,216,79,95,169,115,114,95,124,165,205,116,247,142,93,79,294,142,108,64,186,168,88,72,202,100,130,153,103,106,112,119,165,85,165,168,134,167,98,133,131,101,177,268,80,126,200,91,81,75,214,154,123,406,117,69,144, 0,13253,13677,14456,25158,26036,26611,29810,30229,30825,31250,32159,32556,32845,33175,34293,34860,35189,35550,35911,36114,36791,37132,37357,37606,38079,38316,39779,40087,40387,40572,41025,41341,41536,41792,42348,42593,42804,43065,44462,45276,47247,47482,47671,47867,48775,49005,49434,49681,49957,50529,51290,51580,51762,52076,52344,52518,52895,53264,53428,53673,55970,56255,56418,57031,57621,57925,58155,58688,60179,60413,
chr1  52927324  53050704 SCP2|NM_002979.5|CDS_extension|CTG 0 +  52927324  52927324 0,0,0 16 141,58,72,132,65,127,64,87,151,148,108,154,103,130,80,96, 0,14471,20684,23430,27415,34178,47444,49358,50892,53071,60704,87565,100644,111592,120533,123284,
chr1  70411364  70439127 CTH|NM_001902.6|CDS_extension|CTG 0 +  70411364  70411364 0,0,0 12 219,82,96,110,132,58,78,153,122,53,139,27, 0,4591,6572,10201,12920,18429,18952,20718,22463,23760,27323,27736,
chr1 161766330 161958654 ATF6|NM_007348.4|CDS_extension|ACG 0 + 161766330 161766330 0,0,0 16 112,77,88,107,130,204,221,186,92,132,114,100,71,115,85,209, 0,11913,15581,17659,25077,25793,35721,53302,54739,80118,85391,86893,93876,96867,145965,192115,
chr1 212858384 212858600 FLVCR1|NM_014053.4|overlapping|CTG 0 + 212858384 212858384 0,0,0  1 216, 0,
chr1 231338374 231353361 SPRTN|NM_032018.7|CDS_extension|CTG 0 + 231338374 231338374 0,0,0  5 230,100,129,268,752, 0,1394,9422,12929,14235,
chr2   3379823   3479461 TRAPPC12|NM_016030.6|CDS_extension|TTG 0 +   3379823   3379823 0,0,0 12 53,1051,117,114,139,113,73,74,99,101,88,243, 0,7796,21953,42057,44701,63955,77797,80439,85773,97871,99022,99395,
chr2   3379829   3479461 TRAPPC12|NM_016030.6|CDS_extension|ACG 0 +   3379829   3379829 0,0,0 12 47,1051,117,114,139,113,73,74,99,101,88,243, 0,7790,21947,42051,44695,63949,77791,80433,85767,97865,99016,99389,
chr2  27087190  27099750 KHK|NM_000221.3|CDS_extension|CTG 0 +  27087190  27087190 0,0,0  8 161,117,135,73,147,89,158,86, 0,5141,7286,9538,10312,12005,12229,12474,
chr2  46617234  46624227 CRIPT|NM_014171.6|CDS_extension|CTG 0 +  46617234  46617234 0,0,0  5 64,66,55,104,65, 0,1538,2392,6529,6928,
chr2  47369346  47386613 EPCAM|NM_002354.3|CDS_extension|ACG 0 +  47369346  47369346 0,0,0  9 235,108,241,66,64,102,201,45,42, 0,4116,4461,5887,7667,9606,10422,15819,17225,
chr2  47369394  47386613 EPCAM|NM_002354.3|CDS_extension|GTG 0 +  47369394  47369394 0,0,0  9 187,108,241,66,64,102,201,45,42, 0,4068,4413,5839,7619,9558,10374,15771,17177,
chr2  47369382  47386613 EPCAM|NM_002354.3|CDS_extension|ACG 0 +  47369382  47369382 0,0,0  9 199,108,241,66,64,102,201,45,42, 0,4080,4425,5851,7631,9570,10386,15783,17189,
chr2  97713928  97739498 ZAP70|NM_001079.4|CDS_extension|TTG 0 +  97713928  97713928 0,0,0 13 66,423,161,139,88,47,52,193,207,193,141,113,124, 0,10087,11163,18954,19196,19368,19615,20591,21321,23544,23828,24066,25446,
chr2 111898648 112028864 MERTK|NM_006343.3|CDS_extension|CTG 0 + 111898648 111898648 0,0,0 19 148,421,101,174,87,116,184,152,154,154,86,96,81,93,119,110,160,137,514, 0,30471,46311,48745,66542,69488,76640,84193,95602,98674,102552,104443,105255,109734,111299,120764,122773,123609,129702,
chr2 170818558 170859882 GAD1|NM_000817.3|CDS_extension|CTG 0 + 170818558 170818558 0,0,0 16 115,63,159,243,91,113,116,80,55,117,65,79,150,108,90,174, 0,3528,10916,12391,18234,25486,26947,27147,27450,29117,30727,34155,35314,38459,40245,41150,
chr2 171434457 171481114 DCAF17|NM_025000.4|CDS_extension|CTG 0 + 171434457 171434457 0,0,0 14 246,104,91,137,79,90,105,106,143,110,91,84,156,141, 0,625,9065,14223,15421,18666,23513,23914,34430,39408,42402,43529,45580,46516,
chr2 171434334 171481114 DCAF17|NM_025000.4|CDS_extension|CTG 0 + 171434334 171434334 0,0,0 14 369,104,91,137,79,90,105,106,143,110,91,84,156,141, 0,748,9188,14346,15544,18789,23636,24037,34553,39531,42525,43652,45703,46639,
chr2 173075982 173266750 MAP3K20|NM_016653.3|CDS_extension|ACG 0 + 173075982 173075982 0,0,0 20 20,193,88,102,66,29,138,87,75,107,136,45,31,140,63,93,117,75,151,701, 0,15015,93822,106871,111575,114912,115057,122043,127813,133746,141132,153706,156209,156337,162390,163421,182716,185080,187762,190067,
chr2 206766741 206791802 FASTKD2|NM_014929.4|CDS_truncation|ATG 0 + 206766741 206766741 0,0,0 11 729,104,109,124,140,173,167,219,85,115,120, 0,3349,4440,5152,5439,7483,19991,21195,22077,23830,24941,
chr2 215312121 215349655 ATIC|NM_004044.7|CDS_extension|CTG 0 + 215312121 215312121 0,0,0 16 40,127,77,67,89,152,157,126,108,86,90,129,93,183,156,120, 0,376,6035,7543,13119,13865,14700,20260,21228,22797,23913,26657,32657,34637,36972,37414,
chr2 232014879 232336630 DIS3L2|NM_152383.5|CDS_extension|GTG 0 + 232014879 232014879 0,0,0 20 100,158,54,102,235,101,248,174,80,113,108,234,80,184,87,148,131,105,102,162, 0,634,9397,15099,72607,115739,121592,148579,195446,223653,234359,248327,285160,314933,315810,318960,319489,319751,320893,321589,
chr3  97764824  97768099 ARL6|NM_177976.3|non-overlapping|ACG 0 +  97764824  97764824 0,0,0  3 153,59,19, 0,1807,3256,
chr3 100713697 100748531 TFG|NM_006070.6|CDS_truncation|TTG 0 + 100713697 100713697 0,0,0  7 172,84,147,165,141,99,383, 0,6277,15014,18810,22878,31135,34451,
chr3 101561988 101565993 TRMT10C|NM_017819.4|CDS_extension|ATC 0 + 101561988 101561988 0,0,0  2 15,1224, 0,2781,
chr3 129440288 129520265 IFT122|NM_052985.4|CDS_extension|CTG 0 + 129440288 129440288 0,0,0 31 83,67,85,79,153,77,67,147,177,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,90, 0,9582,11625,18310,20565,20939,23271,24346,26601,29053,36026,36374,37727,39496,41241,43196,47968,51852,55157,59613,62422,64030,66120,67379,72023,74100,75199,77180,78818,79279,79887,
chr3 132660477 132676526 UBA5|NM_024818.6|CDS_extension|GTG 0 + 132660477 132660477 0,0,0 12 221,46,90,110,87,85,105,128,136,76,107,84, 0,5345,5506,8340,9720,10487,11299,11572,14770,15127,15339,15965,
chr3 148991589 149026933 GYG1|NM_004130.4|CDS_extension|CTG 0 + 148991589 148991589 0,0,0  8 58,136,175,163,127,220,51,174, 0,2552,4712,5152,17686,32463,34862,35170,
chr4 122741898 122744025 BBS12|NM_152618.3|CDS_truncation|ATG 0 + 122741898 122741898 0,0,0  1 2127, 0,
chr5    892926    917103 TRIP13|NM_004237.4|CDS_extension|GTG 0 +    892926    892926 0,0,0 13 164,166,130,56,91,73,64,87,107,154,113,70,96, 0,1860,3738,7567,8414,11221,14203,15061,15428,18916,21538,22977,24081,
chr5   1801447   1815916 NDUFS6|NM_004553.6|CDS_truncation|CTG 0 +   1801447   1801447 0,0,0  4 102,54,123,66, 0,873,12891,14403,
chr5  96662275  96771679 CAST|NM_001042440.5|CDS_extension|GTG 0 +  96662275  96662275 0,0,0 29 222,63,72,60,42,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,36, 0,13263,33560,60363,65213,67336,68504,73896,75573,77762,78469,78990,79218,80379,84066,85069,86242,88311,91784,92382,95168,95307,99998,102945,103777,105162,105631,108255,109368,
chr5  96662344  96771679 CAST|NM_001042440.5|CDS_extension|CTG 0 +  96662344  96662344 0,0,0 29 153,63,72,60,42,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,36, 0,13194,33491,60294,65144,67267,68435,73827,75504,77693,78400,78921,79149,80310,83997,85000,86173,88242,91715,92313,95099,95238,99929,102876,103708,105093,105562,108186,109299,
chr5 131170990 131199601 LYRM7|NM_181705.4|CDS_extension|CTG 0 + 131170990 131170990 0,0,0  5 48,73,71,82,71, 0,9104,11238,16037,28540,
chr5 132369858 132394272 SLC22A5|NM_003060.4|CDS_extension|TTG 0 + 132369858 132369858 0,0,0 10 507,104,155,172,127,101,215,183,136,88, 0,8519,14288,15469,17166,19062,20831,22574,23817,24326,
chr7  76048097  76066410 MDH2|NM_005918.4|CDS_extension|TTG 0 +  76048097  76048097 0,0,0  9 129,169,84,110,126,78,100,152,132, 0,6732,9312,9871,12275,15417,16241,16704,18181,
chr7  92447741  92456562 GATAD1|NM_021167.5|CDS_truncation|CTG 0 +  92447741  92447741 0,0,0  5 237,126,60,184,191, 0,1010,2959,6760,8630,
chr7  92447492  92456562 GATAD1|NM_021167.5|CDS_extension|CTG 0 +  92447492  92447492 0,0,0  5 486,126,60,184,191, 0,1259,3208,7009,8879,
chr7  92447684  92456562 GATAD1|NM_021167.5|CDS_extension|ATT 0 +  92447684  92447684 0,0,0  5 294,126,60,184,191, 0,1067,3016,6817,8687,
chr7  92447585  92456562 GATAD1|NM_021167.5|CDS_extension|CTG 0 +  92447585  92447585 0,0,0  5 393,126,60,184,191, 0,1166,3115,6916,8786,
chr7 101127206 101137442 SERPINE1|NM_000602.5|CDS_extension|ACG 0 + 101127206 101127206 0,0,0  9 38,272,234,195,199,101,87,84,38, 0,1186,3214,4668,6488,8287,8508,9794,10198,
chr7 158856663 158945779 WDR60|NM_018051.5|CDS_extension|GTG 0 + 158856663 158856663 0,0,0 25 87,54,421,83,306,56,55,69,78,220,103,130,112,89,130,173,163,114,62,52,61,100,132,224,199, 0,13191,14478,19945,23020,27900,30357,34601,45075,45712,49325,54886,56321,57569,62076,65713,66907,69523,69738,70328,73791,77465,77754,85261,88917,
chr8  15540382  15757809 TUSC3|NM_006765.4|CDS_extension|CTG 0 +  15540382  15540382 0,0,0 10 186,170,118,141,141,90,64,75,91,19, 0,82697,110314,119124,121773,133364,190283,203155,207992,217408,
chr8  22165327  22211728 BMP1|NM_006129.5|CDS_extension|ATC 0 +  22165327  22165327 0,0,0 20 226,114,171,118,179,106,125,116,103,117,146,196,126,161,181,126,128,214,251,135, 0,8274,10815,11205,11633,12524,14377,15040,26721,28730,29117,29396,30134,31352,31912,36475,41526,41975,44117,46266,
chr8  22165327  22201203 BMP1|NM_001199.4|CDS_extension|ATC 0 +  22165327  22165327 0,0,0 16 226,114,171,118,179,106,125,116,103,117,146,196,126,161,181,86, 0,8274,10815,11205,11633,12524,14377,15040,26721,28730,29117,29396,30134,31352,31912,35790,
chr8  22165204  22211728 BMP1|NM_006129.5|CDS_extension|CTG 0 +  22165204  22165204 0,0,0 20 349,114,171,118,179,106,125,116,103,117,146,196,126,161,181,126,128,214,251,135, 0,8397,10938,11328,11756,12647,14500,15163,26844,28853,29240,29519,30257,31475,32035,36598,41649,42098,44240,46389,
chr8  22165204  22201203 BMP1|NM_001199.4|CDS_extension|CTG 0 +  22165204  22165204 0,0,0 16 349,114,171,118,179,106,125,116,103,117,146,196,126,161,181,86, 0,8397,10938,11328,11756,12647,14500,15163,26844,28853,29240,29519,30257,31475,32035,35913,
chr8  38231695  38233065 DDHD2|NM_015214.3|overlapping|CTG 0 +  38231695  38231695 0,0,0  2 164,79, 0,1291,
chr8  38231668  38233065 DDHD2|NM_015214.3|overlapping|CTG 0 +  38231668  38231668 0,0,0  2 191,79, 0,1318,
chr8  73976221  73981621 TMEM70|NM_017866.6|CDS_extension|GTG 0 +  73976221  73976221 0,0,0  3 270,106,467, 0,2534,4933,
chr8  93700593  93728297 FAM92A|NM_145269.5|CDS_extension|TTG 0 +  93700593  93700593 0,0,0  9 80,235,69,102,6,105,114,120,93, 0,630,3026,4315,7417,9177,18081,25800,27611,
chr8  93917054  93923673 PDP1|NM_018444.4|CDS_extension|ATC 0 +  93917054  93917054 0,0,0  2 25,1658, 0,4961,
chr8 125091900 125366885 NSMCE2|NM_173685.4|CDS_extension|GTG 0 + 125091900 125091900 0,0,0  8 58,96,171,107,154,101,107,118, 0,10150,10416,59270,90202,265318,265811,274867,
chr8 125102118 125366885 NSMCE2|NM_173685.4|CDS_extension|TTG 0 + 125102118 125102118 0,0,0  7 28,171,107,154,101,107,118, 0,198,49052,79984,255100,255593,264649,
chr9   4490481   4585558 SLC1A1|NM_004170.6|CDS_extension|CTG 0 +   4490481   4490481 0,0,0 12 289,141,93,115,43,99,185,108,123,195,135,247, 0,54085,70967,73862,75565,77187,81722,83425,85519,86087,92556,94830,
chr9  78297222  78329086 PSAT1|NM_058179.4|CDS_truncation|AGG 0 +  78297222  78297222 0,0,0  9 48,61,70,206,173,170,129,138,106, 0,3379,4731,7512,9091,11191,20453,30828,31758,
chr9  78297150  78329086 PSAT1|NM_058179.4|CDS_extension|ACG 0 +  78297150  78297150 0,0,0  9 120,61,70,206,173,170,129,138,106, 0,3451,4803,7584,9163,11263,20525,30900,31830,
chr9  95875843  96013203 ERCC6L2|NM_020207.7|CDS_extension|TTG 0 +  95875843  95875843 0,0,0 19 241,425,123,194,162,208,141,114,120,72,146,96,100,153,81,1156,155,182,979, 0,5025,22005,31234,39824,40383,45331,46461,47416,52235,52875,65610,80070,90718,94732,96089,102217,128676,136381,
chr9  97412193  97495883 TDRD7|NM_014290.3|CDS_extension|CTG 0 +  97412193  97412193 0,0,0 17 45,213,142,214,74,218,587,187,112,203,135,87,135,111,503,161,221, 0,16266,18739,19831,27051,29464,47984,52648,58364,60099,61298,63189,66245,68634,70655,74978,83469,
chr9 100099304 100104514 INVS|NM_014425.5|non-overlapping|GTG 0 + 100099304 100099304 0,0,0  2 112,17, 0,5193,
chr9 100099316 100104514 INVS|NM_014425.5|non-overlapping|CTG 0 + 100099316 100099316 0,0,0  2 100,17, 0,5181,
chr10  74176830  74708445 ADK|NM_001123.4|CDS_extension|ATC 0 +  74176830  74176830 0,0,0 11 56,75,54,79,173,109,171,36,115,87,125, 0,23933,47707,137836,217310,221640,348425,412451,423548,493352,531490,
chr11    709365    726981 EPS8L2|NM_022772.4|CDS_extension|CTG 0 +    709365    709365 0,0,0 20 86,56,65,162,150,80,143,68,127,89,75,149,133,113,106,120,73,181,133,81, 0,187,1056,10696,11231,11464,11698,11919,12199,12537,12725,13035,13307,13875,15358,16362,16732,16938,17253,17535,
chr11    819676    824862 PNPLA2|NM_020376.4|CDS_extension|CTG 0 +    819676    819676 0,0,0  9 229,233,66,210,61,162,133,123,340, 0,1951,2281,2720,3850,4017,4321,4637,4846,
chr11    819622    824862 PNPLA2|NM_020376.4|CDS_extension|CTG 0 +    819622    819622 0,0,0  9 283,233,66,210,61,162,133,123,340, 0,2005,2335,2774,3904,4071,4375,4691,4900,
chr11   3808568   3825458 PGAP2|NM_001256240.2|CDS_extension|CTG 0 +   3808568   3808568 0,0,0  6 83,175,253,107,109,131, 0,2681,15314,15701,16451,16759,
chr11  46278123  46320746 CREB3L1|NM_052854.4|CDS_truncation|TTG 0 +  46278123  46278123 0,0,0 12 90,229,185,79,158,150,59,69,100,127,265,37, 0,21811,29692,31865,32908,34201,34488,34727,38162,39237,42140,42586,
chr11  70203363  70206473 FADD|NM_003824.4|CDS_extension|CTG 0 +  70203363  70203363 0,0,0  2 382,341, 0,2769,
chr11  70203315  70206473 FADD|NM_003824.4|CDS_extension|GTG 0 +  70203315  70203315 0,0,0  2 430,341, 0,2817,
chr11  70203387  70206473 FADD|NM_003824.4|CDS_extension|AGG 0 +  70203387  70203387 0,0,0  2 358,341, 0,2745,
chr11  70203381  70206473 FADD|NM_003824.4|CDS_extension|CTG 0 +  70203381  70203381 0,0,0  2 364,341, 0,2751,
chr11  72224843  72238353 INPPL1|NM_001567.4|CDS_extension|CTG 0 +  72224843  72224843 0,0,0 28 323,64,151,121,141,94,90,96,151,107,103,197,118,97,139,100,89,82,90,114,89,88,156,79,141,673,134,91, 0,3346,3504,3883,4246,4621,4819,5080,5277,5518,5952,6149,6654,7396,7782,8031,8231,8597,8811,9437,9683,10272,10452,10831,11002,12280,13198,13419,
chr12   6867629   6870383 TPI1|NM_000365.6|CDS_truncation|CTG 0 +   6867629   6867629 0,0,0  7 52,124,85,133,86,88,119, 0,1234,1469,1628,2058,2419,2635,
chr12  48119366  48145708 PFKM|NM_000289.6|CDS_extension|CTG 0 +  48119366  48119366 0,0,0 23 40,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,145, 0,3400,10996,11949,13501,13948,14865,15354,15576,15924,18354,19918,20482,21355,21944,22373,22547,23415,24386,24679,25664,25843,26197,
chr12 104457075 104757803 CHST11|NM_018413.6|CDS_extension|ATC 0 + 104457075 104457075 0,0,0  3 454,86,855, 0,144830,299873,
chr12 104457298 104457415 CHST11|NM_018413.6|overlapping|TTG 0 + 104457298 104457298 0,0,0  1 117, 0,
chr12 120725864 120739448 ACADS|NM_000017.4|CDS_extension|CTG 0 + 120725864 120725864 0,0,0 10 67,164,150,112,152,171,138,96,57,153, 0,1161,11121,11491,11972,12415,12668,12955,13275,13431,
chr12 123253665 123257031 C12orf65|NM_152269.5|CDS_extension|ACG 0 + 123253665 123253665 0,0,0  2 291,219, 0,3147,
chr13  38349868  38350059 UFM1|NM_001286704.2|non-overlapping|GTG 0 +  38349868  38349868 0,0,0  2 53,61, 0,130,
chr13  95677207  95791030 DNAJC3|NM_006260.5|CDS_extension|CTG 0 +  95677207  95677207 0,0,0 12 130,111,125,75,153,182,120,106,121,133,149,158, 0,32019,46034,47970,80436,82832,83471,86435,86625,108731,109799,113665,
chr14  20469467  20476601 PNP|NM_000270.4|CDS_extension|ATC 0 +  20469467  20469467 0,0,0  6 68,170,104,176,191,218, 0,2840,5004,5305,5594,6916,
chr14  56579878  56647497 TMEM260|NM_017799.4|CDS_extension|CTG 0 +  56579878  56579878 0,0,0 16 196,32,152,178,114,180,41,84,115,170,172,149,177,54,91,255, 0,5122,5882,23936,25691,29227,32366,36065,37304,38715,41652,45503,53116,55020,56629,67364,
chr14  56579845  56647497 TMEM260|NM_017799.4|CDS_extension|CTG 0 +  56579845  56579845 0,0,0 16 229,32,152,178,114,180,41,84,115,170,172,149,177,54,91,255, 0,5155,5915,23969,25724,29260,32399,36098,37337,38748,41685,45536,53149,55053,56662,67397,
chr14  60509314  60511252 SIX6|NM_007374.3|CDS_extension|CTG 0 +  60509314  60509314 0,0,0  2 656,169, 0,1769,
chr14  64388391  64458303 MTHFD1|NM_005956.4|CDS_extension|GTG 0 +  64388391  64388391 0,0,0 27 77,85,60,54,137,101,137,112,128,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,90, 0,12401,22698,24080,26966,27247,29496,31422,36412,37338,37627,38945,41792,43140,43395,47177,50704,51734,52993,53662,53871,56301,59825,61053,65362,66331,69822,
chr15  40594337  40662188 KNL1|NM_170589.5|CDS_extension|GTG 0 +  40594337  40594337 0,0,0 27 55,52,40,60,62,53,78,34,38,53,5001,139,68,99,116,91,117,88,78,40,102,101,69,110,119,123,115, 0,8577,10772,12055,14509,15907,16461,17140,21003,24621,26302,33732,34273,34935,46574,50659,51318,52649,55963,56206,57133,57667,60571,62704,63017,65001,67736,
chr15  90717408  90815279 BLM|NM_000057.4|CDS_extension|CTG 0 +  90717408  90717408 0,0,0 22 32,102,701,160,128,133,662,192,119,114,99,149,107,161,196,191,148,200,193,123,202,178, 0,29980,31958,34378,37402,42738,43185,45557,47887,49501,51724,52029,65413,67512,73240,76758,80781,86112,86758,91728,93796,97693,
chr16   3024305   3027657 THOC6|NM_024339.5|CDS_extension|CTG 0 +   3024305   3024305 0,0,0 13 60,116,65,104,38,49,72,103,50,63,111,135,81, 0,1402,1618,1757,1945,2059,2210,2373,2561,2705,2864,3060,3271,
chr16   8674632   8781430 ABAT|NM_020686.6|CDS_extension|CTG 0 +   8674632   8674632 0,0,0 16 79,111,98,30,118,50,81,93,63,64,149,138,168,147,112,122, 0,61066,71368,73475,75789,83124,89436,90105,91575,93560,94192,98147,100257,101711,104846,106676,
chr16   8797849   8847825 PMM2|NM_000303.3|CDS_extension|GTG 0 +   8797849   8797849 0,0,0  8 99,112,77,92,100,76,116,102, 0,3949,6917,8466,13229,13788,15141,49874,
chr16  15664748  15724251 NDE1|NM_001143979.2|CDS_extension|AGG 0 +  15664748  15664748 0,0,0  8 113,154,149,137,180,92,152,61, 0,2537,13052,22626,26395,29416,31960,59442,
chr16  30065858  30070212 ALDOA|NM_184041.5|CDS_extension|TTG 0 +  30065858  30065858 0,0,0  9 69,133,212,55,161,84,175,200,96, 0,1375,1591,2787,2959,3447,3640,3971,4258,
chr16  68315913  68357224 PRMT7|NM_019023.5|CDS_extension|TTG 0 +  68315913  68315913 0,0,0 17 161,37,150,109,113,242,181,128,136,84,48,90,162,75,161,97,171, 0,5512,8769,13152,21545,23408,23874,29761,30231,31297,31717,32428,36334,37578,39809,40787,41140,
chr16  68315931  68357224 PRMT7|NM_019023.5|CDS_extension|CTG 0 +  68315931  68315931 0,0,0 17 143,37,150,109,113,242,181,128,136,84,48,90,162,75,161,97,171, 0,5494,8751,13134,21527,23390,23856,29743,30213,31279,31699,32410,36316,37560,39791,40769,41122,
chr16  81315071  81377596 GAN|NM_022041.4|CDS_extension|GTG 0 +  81315071  81315071 0,0,0 11 209,115,351,218,122,113,150,137,129,110,182, 0,36511,39333,41713,42738,47427,48722,49902,50278,62147,62343,
chr17  16217235  16325898 PIGL|NM_004278.4|CDS_truncation|ATG 0 +  16217235  16217235 0,0,0  7 226,100,91,68,32,134,99, 0,16735,82652,96311,99445,100539,108564,
chr17  19648794  19675572 ALDH3A2|NM_000382.3|CDS_extension|GTG 0 +  19648794  19648794 0,0,0 10 330,232,86,209,118,142,167,100,236,15, 0,2752,3752,7571,8950,12332,14538,16153,22926,26763,
chr17  19648854  19675572 ALDH3A2|NM_000382.3|CDS_extension|GTG 0 +  19648854  19648854 0,0,0 10 270,232,86,209,118,142,167,100,236,15, 0,2692,3692,7511,8890,12272,14478,16093,22866,26703,
chr17  40288055  40302001 CDC6|NM_001254.4|CDS_extension|CTG 0 +  40288055  40288055 0,0,0 12 35,191,282,200,176,107,140,101,65,203,141,90, 0,1352,3002,3413,5400,5894,6308,7300,8647,12772,13412,13856,
chr17  40287995  40302001 CDC6|NM_001254.4|CDS_extension|CTG 0 +  40287995  40287995 0,0,0 12 95,191,282,200,176,107,140,101,65,203,141,90, 0,1412,3062,3473,5460,5954,6368,7360,8707,12832,13472,13916,
chr17  47941609  47946782 PNPO|NM_018129.4|CDS_extension|ATT 0 +  47941609  47941609 0,0,0  7 204,125,100,54,129,71,169, 0,1696,3006,3949,4251,4713,5004,
chr17  75205746  75235679 NUP85|NM_024844.5|CDS_extension|CTG 0 +  75205746  75205746 0,0,0 19 48,94,163,71,44,70,122,135,123,132,107,84,66,152,118,101,152,102,102, 0,2780,4076,6245,7329,10007,12438,19356,19595,19951,20304,25593,25826,26081,27104,27311,28890,29353,29831,
chr17  75205719  75235679 NUP85|NM_024844.5|CDS_extension|ATT 0 +  75205719  75205719 0,0,0 19 75,94,163,71,44,70,122,135,123,132,107,84,66,152,118,101,152,102,102, 0,2807,4103,6272,7356,10034,12465,19383,19622,19978,20331,25620,25853,26108,27131,27338,28917,29380,29858,
chr17  75261786  75265923 MRPS7|NM_015971.4|CDS_extension|ATC 0 +  75261786  75261786 0,0,0  5 197,192,64,168,222, 0,710,1017,1553,3915,
chr17  75261765  75265923 MRPS7|NM_015971.4|CDS_extension|GTG 0 +  75261765  75261765 0,0,0  5 218,192,64,168,222, 0,731,1038,1574,3936,
chr17  75261816  75265923 MRPS7|NM_015971.4|CDS_extension|CTG 0 +  75261816  75261816 0,0,0  5 167,192,64,168,222, 0,680,987,1523,3885,
chr17  76727010  76733686 METTL23|NM_001080510.5|CDS_extension|CTG 0 +  76727010  76727010 0,0,0  5 168,105,238,85,166, 0,2679,5967,6282,6510,
chr18  58671475  58747842 MALT1|NM_006785.4|CDS_extension|ATT 0 +  58671475  58671475 0,0,0 17 377,167,122,151,179,97,33,27,33,204,178,75,128,150,158,126,438, 0,9694,24890,28965,37902,38500,39445,42607,44459,51572,61921,62831,63726,70389,72862,74190,75929,
chr19   1491212   1497211 REEP6|NM_001329556.3|CDS_extension|GTG 0 +   1491212   1491212 0,0,0  6 172,94,139,169,81,38, 0,4081,4256,5072,5378,5961,
chr19   1912095   1913151 ADAT3|NM_138422.4|CDS_truncation|ATG 0 +   1912095   1912095 0,0,0  1 1056, 0,
chr19   6361541   6368710 CLPP|NM_006012.4|CDS_extension|ATC 0 +   6361541   6361541 0,0,0  6 231,72,97,188,106,173, 0,327,904,2910,4716,6996,
chr19   7629806   7631556 PET100|NM_001171155.2|CDS_extension|CTG 0 +   7629806   7629806 0,0,0  4 54,87,24,84, 0,766,1016,1666,
chr19  13906360  13930395 CC2D1A|NM_017721.5|CDS_extension|GTG 0 +  13906360  13906360 0,0,0 29 141,136,116,66,135,235,125,73,72,131,73,134,112,173,123,59,117,74,59,52,100,91,138,65,64,127,77,48,21, 0,3462,5962,6167,6807,7043,11709,12143,12385,12551,12769,13457,14196,14389,16972,17187,17334,20156,20306,20460,20617,20814,21532,21763,23018,23173,23717,23881,24014,
chr19  13906276  13930395 CC2D1A|NM_017721.5|CDS_extension|GTG 0 +  13906276  13906276 0,0,0 29 225,136,116,66,135,235,125,73,72,131,73,134,112,173,123,59,117,74,59,52,100,91,138,65,64,127,77,48,21, 0,3546,6046,6251,6891,7127,11793,12227,12469,12635,12853,13541,14280,14473,17056,17271,17418,20240,20390,20544,20701,20898,21616,21847,23102,23257,23801,23965,24098,
chr19  38264886  38292006 SPINT2|NM_021102.4|CDS_extension|CTG 0 +  38264886  38264886 0,0,0  7 112,171,60,54,162,39,167, 0,18740,22989,24251,25232,25650,26953,
chr19  49818320  49836944 MED25|NM_030973.4|CDS_extension|GTG 0 +  49818320  49818320 0,0,0 18 155,46,125,99,121,163,131,88,194,129,86,58,108,192,72,219,181,98, 0,250,851,10128,10649,11465,11767,12190,12373,13012,13615,13779,13987,16665,17213,17406,17905,18526,
chr20   3889430   3923294 PANK2|NM_153638.4|CDS_truncation|CTG 0 +   3889430   3889430 0,0,0  7 298,353,254,177,124,126,51, 0,18495,21146,23027,27496,29240,33813,
chr20  23362193  23364483 GZF1|NM_022482.5|overlapping|CTG 0 +  23362193  23362193 0,0,0  2 44,121, 0,2169,
chr20  48921835  49033199 ARFGEF2|NM_006420.3|CDS_extension|ATC 0 +  48921835  48921835 0,0,0 39 175,31,124,147,180,235,69,152,131,235,100,140,109,184,112,206,85,172,152,129,159,148,100,41,170,152,173,161,131,130,136,139,55,115,131,169,139,118,177, 0,19363,20028,29487,30869,31720,41994,44036,47311,49284,50490,51309,52930,54180,62893,63572,66468,66655,67449,67720,69204,72615,73947,76357,76500,83234,88396,90088,91728,91995,94444,95413,95660,97048,101215,103477,106694,110213,111187,
chr21  46324174  46445327 PCNT|NM_006031.6|CDS_extension|CTG 0 +  46324174  46324174 0,0,0 47 108,213,372,81,256,56,175,137,112,223,82,175,218,455,556,147,152,143,233,163,213,230,117,21,207,171,153,879,156,771,103,155,141,174,196,223,151,687,245,103,174,120,230,77,139,128,44, 0,2202,10222,21953,22568,23282,24837,25509,27254,28929,29812,31277,32799,39305,42409,57519,61657,64567,65024,66495,66989,73090,73839,74060,75415,77376,78156,87014,88662,91894,94029,97795,101656,103447,104220,105835,106332,107354,111729,112804,113989,115908,116680,118322,119635,120519,121109,
chr22  17085034  17109820 IL17RA|NM_014339.7|CDS_extension|ACG 0 +  17085034  17085034 0,0,0 13 195,25,147,113,127,48,164,84,85,12,102,42,1514, 0,12027,12762,13740,15320,16961,17104,18459,19691,20556,20818,22692,23272,
chr22  35400192  35424255 MCM5|NM_006739.4|CDS_extension|GTG 0 +  35400192  35400192 0,0,0 17 16,175,127,129,173,156,167,172,112,144,66,177,113,129,143,128,102, 0,238,3014,3221,6360,8215,10551,12317,13682,15636,16146,16445,17551,19691,21125,23021,23961,
chr22  46335740  46357006 TRMU|NM_018006.5|CDS_extension|CTG 0 +  46335740  46335740 0,0,0 11 106,166,107,123,173,54,67,101,145,83,165, 0,2038,7521,10681,14550,16380,16523,18026,19703,20249,21101,
chrX  24054989  24076785 EIF2S3|NM_001415.4|CDS_truncation|GTG 0 +  24054989  24054989 0,0,0 12 48,64,128,122,95,159,135,95,145,170,173,64, 0,625,2431,2643,5098,7426,9211,11008,12974,16568,18101,21732,
chrX  71533197  71573794 OGT|NM_181672.3|CDS_extension|ACG 0 +  71533197  71533197 0,0,0 22 139,181,244,69,117,80,196,141,101,154,102,180,159,90,126,171,117,171,153,253,124,175, 0,2980,4631,11369,14709,21315,21992,22756,23482,23754,23997,24295,26069,26390,28577,29649,29932,30131,31403,34302,34795,40422,
chrX  78104298  78125830 PGK1|NM_000291.4|CDS_extension|TTG 0 +  78104298  78104298 0,0,0 11 107,51,156,145,104,120,115,180,178,99,41, 0,5568,9445,9717,13013,13752,18536,18896,20575,21028,21491,
chrX 119574600 119583255 UBE2A|NM_003336.4|CDS_extension|CTG 0 + 119574600 119574600 0,0,0  6 155,81,26,90,89,129, 0,300,774,6906,7987,8526,
chrX 124346591 124371391 SH2D1A|NM_002351.5|CDS_extension|ATC 0 + 124346591 124346591 0,0,0  4 188,64,145,41, 0,19169,23584,24759,
chrX 129540394 129590270 OCRL|NM_000276.4|CDS_extension|ATC 0 + 129540394 129540394 0,0,0 24 84,80,80,39,111,90,121,162,102,115,117,188,112,110,136,111,166,236,24,117,85,128,112,125, 0,349,4563,8168,16930,17466,18238,18445,20155,20784,21989,22204,25377,26859,28869,34745,35502,35922,43949,46607,47784,48491,49450,49751,
chrX 134460251 134500077 HPRT1|NM_000194.3|CDS_extension|CTG 0 + 134460251 134460251 0,0,0  9 87,107,184,66,18,83,47,77,48, 0,13107,14929,26213,29936,33256,38138,38356,39778,
chrX 151397248 151405058 VMA21|NM_001017980.4|CDS_extension|CTG 0 + 151397248 151397248 0,0,0  3 113,110,143, 0,6382,7667,
chrX 152846291 152869116 NSDHL|NM_015922.3|CDS_extension|TTG 0 + 152846291 152846291 0,0,0  7 141,159,147,129,143,103,333, 0,3973,12478,16304,19527,21279,22492,
chr1  23795948  23799414 GALE|NM_000403.4|CDS_extension|TTG 0 -  23795948  23795948 0,0,0 11 59,115,78,86,67,114,177,114,116,126,49, 0,202,560,748,927,1085,1746,2168,2666,2938,3417,
chr1  45511328  45518983 PRDX1|NM_002574.4|CDS_truncation|ATG 0 -  45511328  45511328 0,0,0  5 86,131,123,154,46, 0,3178,3544,4325,7609,
chr1  58576184  58577210 TACSTD2|NM_002353.3|CDS_extension|ACG 0 -  58576184  58576184 0,0,0  1 1026, 0,
chr1 169465848 169485880 SLC19A2|NM_006996.3|CDS_extension|CTG 0 - 169465848 169465848 0,0,0  6 129,142,193,223,603,318, 0,2262,2795,4115,11306,19714,
chr1 197146397 197146481 ASPM|NM_018136.5|overlapping|GTG 0 - 197146397 197146397 0,0,0  1 84, 0,
chr1 219968805 220046472 EPRS|NM_004446.3|CDS_extension|TTG 0 - 219968805 219968805 0,0,0 32 151,65,79,161,174,198,156,102,80,73,210,52,263,234,360,118,113,208,137,111,60,85,234,172,193,127,95,140,157,100,85,130, 0,252,3263,4432,9740,10612,11279,11950,12572,13966,14383,15400,18336,19784,28177,32332,36442,37300,38396,42140,49643,50189,51182,53541,55458,56326,61580,63581,64696,66108,71379,77537,
chr1 219968805 220046436 EPRS|NM_004446.3|CDS_extension|CTG 0 - 219968805 219968805 0,0,0 32 151,65,79,161,174,198,156,102,80,73,210,52,263,234,360,118,113,208,137,111,60,85,234,172,193,127,95,140,157,100,85,94, 0,252,3263,4432,9740,10612,11279,11950,12572,13966,14383,15400,18336,19784,28177,32332,36442,37300,38396,42140,49643,50189,51182,53541,55458,56326,61580,63581,64696,66108,71379,77537,
chr1 235450205 235504432 B3GALNT2|NM_152490.5|CDS_extension|CTG 0 - 235450205 235450205 0,0,0 12 135,57,160,126,184,79,111,96,194,101,148,292, 0,2884,3950,5353,8397,15430,20644,29848,34116,38962,44475,53935,
chr2  69326188  69387185 GFPT1|NM_001244710.2|CDS_extension|GTG 0 -  69326188  69326188 0,0,0 20 45,162,168,128,115,158,121,98,96,164,106,54,80,62,135,59,126,108,108,121, 0,725,2082,3108,3495,11709,12256,15963,19715,21982,23889,28070,28300,30307,32140,33079,37356,43812,47817,60876,
chr2  88557735  88627349 EIF2AK3|NM_004836.7|CDS_extension|TTG 0 -  88557735  88557735 0,0,0 17 201,63,102,168,781,150,123,113,221,123,141,163,235,134,195,130,383, 0,1181,4553,13138,16930,18818,21782,25694,28105,30246,31025,32707,33082,35536,37733,55988,69231,
chr2 135907315 135985498 DARS|NM_001349.4|CDS_extension|GTG 0 - 135907315 135907315 0,0,0 16 92,72,112,81,43,147,148,135,112,60,81,103,103,93,58,96, 0,3823,4066,5170,7153,8910,13137,15468,17071,25467,26594,36062,54080,71958,76081,78087,
chr2 178432096 178451081 PRKRA|NM_003690.5|CDS_extension|ACG 0 - 178432096 178432096 0,0,0  8 158,175,95,118,79,82,170,116, 0,4048,9513,11170,12325,15408,18145,18869,
chr2 196841233 196926682 PGAP1|NM_024989.4|CDS_extension|TTG 0 - 196841233 196841233 0,0,0 27 139,105,188,51,136,198,91,94,39,109,67,52,74,76,78,52,47,84,56,106,67,53,158,172,176,154,213, 0,1487,2654,3290,4648,5769,6713,23753,29707,31207,31726,32294,32451,34512,38842,44190,44600,49594,51112,51906,55897,57083,61351,71648,75184,78763,85236,
chr2 206124184 206153672 NDUFS1|NM_005006.7|CDS_truncation|AGG 0 - 206124184 206124184 0,0,0 18 92,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,55, 0,2354,2525,3612,5903,8760,14300,17756,18501,19833,20707,22718,23346,23568,24835,25633,28234,29433,
chr2 219550834 219571412 OBSL1|NM_015311.3|CDS_extension|CTG 0 - 219550834 219550834 0,0,0 21 8,270,105,162,157,113,267,273,270,276,288,276,273,273,273,273,297,303,252,270,1192, 0,694,1277,1701,2033,2739,3639,5185,5619,6508,6988,7349,8390,11567,12520,14407,15995,16438,16883,17220,19386,
chr2 230169123 230219938 SP110|NM_004509.5|CDS_extension|ATC 0 - 230169123 230169123 0,0,0 18 114,141,109,116,143,99,69,150,81,150,69,78,84,84,267,169,148,65, 0,1497,2942,3720,8414,9033,14448,16870,31761,33455,38867,40807,42346,43223,43637,45826,47657,50750,
chr2 231732951 231781168 PDE6D|NM_002601.4|CDS_extension|CTG 0 - 231732951 231732951 0,0,0  5 82,106,126,89,104, 0,4235,5061,6148,48113,
chr3  48857709  48898836 SLC25A20|NM_000387.6|CDS_extension|ACG 0 -  48857709  48857709 0,0,0  9 63,125,110,73,118,91,128,93,147, 0,797,1382,1845,4832,21648,26287,34270,40980,
chr3  49121225  49132948 LAMB2|NM_002292.4|CDS_extension|TTG 0 -  49121225  49121225 0,0,0 32 137,160,177,142,208,349,242,185,373,97,218,225,164,232,144,193,133,128,159,133,80,113,180,189,121,203,64,189,74,136,173,157, 0,207,458,718,937,1478,1906,2221,2502,2964,3169,3475,3780,4027,4521,4741,5139,7232,7435,7794,8019,8378,8613,9005,9514,9724,10153,10309,10890,11044,11265,11566,
chr3  49121225  49133002 LAMB2|NM_002292.4|CDS_extension|CTG 0 -  49121225  49121225 0,0,0 32 137,160,177,142,208,349,242,185,373,97,218,225,164,232,144,193,133,128,159,133,80,113,180,189,121,203,64,189,74,136,173,211, 0,207,458,718,937,1478,1906,2221,2502,2964,3169,3475,3780,4027,4521,4741,5139,7232,7435,7794,8019,8378,8613,9005,9514,9724,10153,10309,10890,11044,11265,11566,
chr3  49358131  49358338 GPX1|NM_000581.4|overlapping|CTG 0 -  49358131  49358131 0,0,0  1 207, 0,
chr3  53225755  53255987 TKT|NM_001135055.3|CDS_extension|ATC 0 -  53225755  53225755 0,0,0 14 176,123,94,84,131,157,165,194,119,192,98,114,118,152, 0,1000,2300,2520,3251,3524,4701,5601,7400,9227,14495,15376,16369,30080,
chr3 108162476 108222343 IFT57|NM_018010.4|CDS_extension|CTG 0 - 108162476 108162476 0,0,0 11 179,67,63,132,72,123,69,91,119,163,233, 0,1186,2954,4377,5316,29044,44151,51454,56058,56933,59634,
chr5   6599925   6633024 NSUN2|NM_017755.6|CDS_extension|GTG 0 -   6599925   6599925 0,0,0 19 307,40,139,81,136,93,185,97,131,74,131,75,193,85,72,106,105,158,141, 0,2535,4212,4679,5347,6894,7274,9900,11029,11799,16801,18024,20180,22090,23288,25638,31947,32673,32958,
chr5  16474740  16616989 RETREG1|NM_001034850.3|CDS_extension|CTG 0 -  16474740  16474740 0,0,0  9 494,127,65,138,85,127,31,107,338, 0,2921,3293,4109,6268,8605,91022,97255,141911,
chr5  33989092  34008031 AMACR|NM_014324.6|CDS_extension|CTG 0 -  33989092  33989092 0,0,0  5 410,187,161,144,259, 0,9548,15481,16663,18680,
chr5  37370812  37371022 NUP155|NM_004298.4|non-overlapping|TTG 0 -  37370812  37370812 0,0,0  1 210, 0,
chr5  37291899  37371022 NUP155|NM_153485.3|CDS_extension|TTG 0 -  37291899  37291899 0,0,0 35 139,107,137,111,121,114,130,155,105,154,136,139,192,131,98,116,67,148,63,89,95,111,171,101,153,98,92,74,106,167,93,71,97,138,202, 0,979,2429,6968,7548,9537,10879,11360,12839,13157,15397,17229,18652,22298,26088,32092,34001,35729,36458,37290,38138,39785,41563,45918,49190,50649,56605,57272,58260,59290,60837,66181,71988,72347,78921,
chr5  38481594  38530644 LIFR|NM_002310.6|CDS_truncation|ATG 0 -  38481594  38481594 0,0,0 19 624,79,94,162,168,102,180,214,71,163,146,170,130,255,175,164,140,115,139, 0,994,3180,4224,7483,8595,12011,14787,17918,21042,22381,24310,24908,28869,30195,41824,45560,47131,48911,
chr5 140645586 140647613 NDUFA2|NM_002488.5|CDS_extension|CTG 0 - 140645586 140645586 0,0,0  3 92,107,131, 0,1669,1896,
chr5 146114105 146182523 LARS|NM_020117.11|CDS_extension|GTG 0 - 146114105 146114105 0,0,0 32 206,133,96,105,111,111,141,141,91,184,64,58,213,139,83,66,86,78,141,54,77,88,226,68,64,113,162,138,81,88,119,36, 0,6265,8386,9876,12329,14566,14872,15912,16913,18792,21495,26098,28766,29306,30161,30366,30518,35516,37756,39068,39628,39787,43297,43622,45301,46268,50204,54022,57804,58581,63441,68382,
chr5 146114105 146182547 LARS|NM_020117.11|CDS_extension|GTG 0 - 146114105 146114105 0,0,0 32 206,133,96,105,111,111,141,141,91,184,64,58,213,139,83,66,86,78,141,54,77,88,226,68,64,113,162,138,81,88,119,60, 0,6265,8386,9876,12329,14566,14872,15912,16913,18792,21495,26098,28766,29306,30161,30366,30518,35516,37756,39068,39628,39787,43297,43622,45301,46268,50204,54022,57804,58581,63441,68382,
chr6  32838236  32838723 TAP2|NM_001290043.2|non-overlapping|TTG 0 -  32838236  32838236 0,0,0  2 1,71, 0,416,
chr6  32838236  32838714 TAP2|NM_001290043.2|non-overlapping|ACG 0 -  32838236  32838236 0,0,0  2 1,62, 0,416,
chr6  32838236  32838696 TAP2|NM_001290043.2|non-overlapping|CTG 0 -  32838236  32838236 0,0,0  2 1,44, 0,416,
chr6  69676157  69796974 LMBRD1|NM_018368.4|CDS_extension|GTG 0 -  69676157  69676157 0,0,0 16 114,92,79,150,105,103,65,153,126,74,89,68,98,61,177,162, 0,292,21405,22885,24607,25285,25731,37487,42798,61784,65631,73183,76101,104336,114138,120655,
chr6  73595076  73653916 SLC17A5|NM_012434.5|CDS_extension|GTG 0 -  73595076  73595076 0,0,0 11 138,91,148,133,159,119,87,88,234,197,124, 0,5274,15323,20238,26727,40305,41544,43335,46614,49330,58716,
chr6  81749694  81752114 TENT5A|NM_017633.3|CDS_truncation|ATG 0 -  81749694  81749694 0,0,0  2 777,525, 0,1895,
chr6  81749694  81752162 TENT5A|NM_017633.3|CDS_extension|GTG 0 -  81749694  81749694 0,0,0  2 777,573, 0,1895,
chr6  85505966  85593661 SNX14|NM_153816.6|CDS_truncation|GTG 0 -  85505966  85505966 0,0,0 29 39,57,92,96,165,124,120,41,112,101,84,202,133,27,59,125,156,115,81,45,76,157,85,88,44,79,77,121,83, 0,1266,2001,7833,8103,8539,11789,12041,20159,22295,24225,27632,30825,32871,36018,37215,37638,41145,41350,41539,42334,43756,52009,59365,61567,66170,66331,68291,87612,
chr6 131574292 131628118 MED23|NM_015979.4|CDS_extension|ATA 0 - 131574292 131574292 0,0,0 31 3,138,132,121,215,73,166,237,217,171,181,206,125,164,175,143,246,146,144,201,18,96,113,70,102,99,112,125,88,32,108, 0,13416,15172,16029,17020,18095,18713,19806,21654,22225,23994,24263,25745,27925,28737,29885,30947,32186,33635,35753,41031,41614,44114,45534,46335,47588,49058,50572,53103,53348,53718,
chr6 131574292 131628154 MED23|NM_015979.4|CDS_extension|ACG 0 - 131574292 131574292 0,0,0 31 3,138,132,121,215,73,166,237,217,171,181,206,125,164,175,143,246,146,144,201,18,96,113,70,102,99,112,125,88,32,144, 0,13416,15172,16029,17020,18095,18713,19806,21654,22225,23994,24263,25745,27925,28737,29885,30947,32186,33635,35753,41031,41614,44114,45534,46335,47588,49058,50572,53103,53348,53718,
chr6 137198030 137219381 IFNGR1|NM_000416.3|CDS_extension|CTG 0 - 137198030 137198030 0,0,0  7 609,128,187,173,173,115,139, 0,2850,5468,6301,8105,8932,21212,
chr6 158111365 158168159 SERAC1|NM_032861.4|CDS_extension|CTG 0 - 158111365 158111365 0,0,0 17 137,144,183,98,95,142,151,163,114,129,122,132,90,137,37,92,20, 0,2083,3423,4819,6361,7663,9059,16742,19007,31690,32933,35416,37499,39087,43949,46907,56774,
chr6 166365428 166382930 MPC1|NM_016098.4|CDS_extension|CTG 0 - 166365428 166365428 0,0,0  5 25,133,97,4,125, 0,545,1366,4789,17377,
chr6 166929587 166956212 RNASET2|NM_003730.6|CDS_extension|CTG 0 - 166929587 166929587 0,0,0  9 204,75,46,114,71,58,56,61,116, 0,1456,4503,9307,13431,17094,18982,22900,26509,
chr7 105457789 105522178 PUS7|NM_019042.5|CDS_extension|CTG 0 - 105457789 105457789 0,0,0 16 137,92,130,102,127,161,62,126,129,78,112,145,102,85,430,127, 0,1378,4831,7523,10547,12898,14342,23262,24522,33750,37352,44630,48165,48399,50325,64262,
chr7 105457789 105522121 PUS7|NM_019042.5|CDS_extension|TTG 0 - 105457789 105457789 0,0,0 16 137,92,130,102,127,161,62,126,129,78,112,145,102,85,430,70, 0,1378,4831,7523,10547,12898,14342,23262,24522,33750,37352,44630,48165,48399,50325,64262,
chr7 105457789 105522139 PUS7|NM_019042.5|CDS_extension|GTG 0 - 105457789 105457789 0,0,0 16 137,92,130,102,127,161,62,126,129,78,112,145,102,85,430,88, 0,1378,4831,7523,10547,12898,14342,23262,24522,33750,37352,44630,48165,48399,50325,64262,
chr7 105457789 105522211 PUS7|NM_019042.5|CDS_extension|CTG 0 - 105457789 105457789 0,0,0 16 137,92,130,102,127,161,62,126,129,78,112,145,102,85,430,160, 0,1378,4831,7523,10547,12898,14342,23262,24522,33750,37352,44630,48165,48399,50325,64262,
chr7 107923950 108002963 LAMB1|NM_002291.3|CDS_extension|ACG 0 - 107923950 107923950 0,0,0 33 137,160,177,142,208,145,204,242,185,370,97,215,225,164,232,144,205,124,128,159,136,80,113,180,189,121,203,64,189,74,136,176,115, 0,279,2232,5113,5461,7405,8223,11464,13142,16038,27275,28058,29579,31516,35298,35740,36494,37255,37598,38954,40601,49041,51035,51283,51738,54096,56658,62071,62224,70936,74406,77607,78898,
chr7 130398890 130441005 CEP41|NM_018718.3|CDS_extension|GTG 0 - 130398890 130398890 0,0,0 11 149,216,115,68,152,145,70,62,48,64,72, 0,1148,1816,2990,3757,5673,12231,13288,18028,29064,42043,
chr8  30578920  30658043 GTF2E2|NM_002095.6|CDS_extension|GTG 0 -  30578920  30578920 0,0,0  8 117,116,94,183,108,92,170,71, 0,1360,28136,33378,35687,56111,74512,79052,
chr8  30578920  30657989 GTF2E2|NM_002095.6|CDS_extension|CTG 0 -  30578920  30578920 0,0,0  8 117,116,94,183,108,92,170,17, 0,1360,28136,33378,35687,56111,74512,79052,
chr8  60208784  60281255 CA8|NM_004056.6|CDS_extension|ACG 0 -  60208784  60208784 0,0,0  8 135,113,49,63,96,125,192,208, 0,13864,15752,18088,23499,57140,70904,72263,
chr8  60208784  60281351 CA8|NM_004056.6|CDS_extension|ACG 0 -  60208784  60208784 0,0,0  8 135,113,49,63,96,125,192,304, 0,13864,15752,18088,23499,57140,70904,72263,
chr8  60208784  60281375 CA8|NM_004056.6|CDS_extension|CTG 0 -  60208784  60208784 0,0,0  8 135,113,49,63,96,125,192,328, 0,13864,15752,18088,23499,57140,70904,72263,
chr8  60208784  60281315 CA8|NM_004056.6|CDS_extension|CTG 0 -  60208784  60208784 0,0,0  8 135,113,49,63,96,125,192,268, 0,13864,15752,18088,23499,57140,70904,72263,
chr8  60208784  60281264 CA8|NM_004056.6|CDS_extension|CTG 0 -  60208784  60208784 0,0,0  8 135,113,49,63,96,125,192,217, 0,13864,15752,18088,23499,57140,70904,72263,
chr8  60208784  60281300 CA8|NM_004056.6|CDS_extension|CTG 0 -  60208784  60208784 0,0,0  8 135,113,49,63,96,125,192,253, 0,13864,15752,18088,23499,57140,70904,72263,
chr8  61503358  61714416 ASPH|NM_004318.4|CDS_extension|CTG 0 -  61503358  61503358 0,0,0 25 151,134,92,136,138,90,99,137,151,87,86,42,45,57,42,33,48,57,33,129,75,93,69,150,148, 0,14169,14673,22618,44712,49672,52565,59385,63809,73413,80585,115619,130324,134588,134963,139529,140027,140586,141241,143391,147691,150209,177609,180680,210910,
chr8 103400410 103415006 SLC25A32|NM_030780.5|CDS_extension|GTG 0 - 103400410 103400410 0,0,0  7 136,146,114,161,86,151,223, 0,1105,1530,2753,4365,7223,14373,
chr8 144511430 144517826 RECQL4|NM_004260.4|CDS_extension|CTG 0 - 144511430 144511430 0,0,0 21 125,109,157,181,170,130,292,263,142,180,174,84,137,93,132,127,777,141,95,34,126, 0,250,480,713,961,1211,1416,1787,2140,2497,2758,3011,3505,3719,3895,4333,4557,5619,5983,6171,6270,
chr9  26905510  26947093 PLAA|NM_001031689.3|CDS_extension|CTG 0 -  26905510  26905510 0,0,0 14 566,165,102,69,69,220,158,170,136,168,121,101,194,197, 0,2323,4827,8368,11586,13799,14716,17667,20314,20882,22589,22797,29502,41386,
chr9  35737168  35748755 GBA2|NM_020944.3|CDS_extension|CTG 0 -  35737168  35737168 0,0,0 17 279,192,116,143,107,152,108,105,173,126,154,103,240,219,116,92,410, 0,579,868,1063,1357,1583,1833,2146,2459,2829,3040,3357,3656,4503,7128,7446,11177,
chr9  85712544  85741878 AGTPBP1|NM_001330701.2|non-overlapping|ATG 0 -  85712544  85712544 0,0,0  2 22,104, 0,29230,
chr9 120389235 120579975 CDK5RAP2|NM_018249.6|CDS_truncation|ATG 0 - 120389235 120389235 0,0,0 38 57,47,127,144,266,78,237,122,190,117,120,173,49,233,574,123,232,418,173,96,138,110,131,101,144,171,219,93,120,54,163,155,124,77,111,68,68,56, 0,505,5276,11506,13570,14800,17776,19111,19891,22122,25804,30552,33457,48059,50163,54384,58659,64220,69214,71336,78624,80875,82512,88114,98058,102071,129191,135750,138570,139508,140742,147136,149805,156478,161556,179085,182738,190684,
chr9 128633743 128656666 WDR34|NM_052844.3|CDS_truncation|CTG 0 - 128633743 128633743 0,0,0  9 239,158,233,168,110,158,110,249,126, 0,482,945,1348,1914,2537,3174,6947,22797,
chr10  89214827  89251774 LIPA|NM_000235.4|CDS_extension|CTG 0 -  89214827  89214827 0,0,0 10 234,72,72,147,137,110,199,118,112,38, 0,1110,7683,8856,10264,12067,13372,30848,32710,36909,
chr10  89214827  89251780 LIPA|NM_000235.4|CDS_extension|CTG 0 -  89214827  89214827 0,0,0 10 234,72,72,147,137,110,199,118,112,44, 0,1110,7683,8856,10264,12067,13372,30848,32710,36909,
chr10 124412127 124418892 OAT|NM_000274.4|overlapping|TTG 0 - 124412127 124412127 0,0,0  2 73,20, 0,6745,
chr10 125788867 125823104 UROS|NM_000375.3|CDS_extension|CTG 0 - 125788867 125788867 0,0,0 10 138,99,86,81,75,75,97,84,89,76, 0,6012,7235,9197,18545,23346,26166,27309,27569,34161,
chr10 125788867 125823047 UROS|NM_000375.3|CDS_extension|CTG 0 - 125788867 125788867 0,0,0 10 138,99,86,81,75,75,97,84,89,19, 0,6012,7235,9197,18545,23346,26166,27309,27569,34161,
chr11    615340    615445 IRF7|NM_004031.4|non-overlapping|CTG 0 -    615340    615340 0,0,0  1 105, 0,
chr11  36592584  36598137 RAG2|NM_000536.4|CDS_extension|ATT 0 -  36592584  36592584 0,0,0  2 1611,36, 0,5517,
chr11  71444890  71447628 DHCR7|NM_001360.3|overlapping|ATT 0 -  71444890  71444890 0,0,0  2 68,19, 0,2719,
chr11  71444890  71447700 DHCR7|NM_001360.3|overlapping|TTG 0 -  71444890  71444890 0,0,0  2 68,91, 0,2719,
chr11 102790411 102798116 MMP1|NM_002421.4|CDS_extension|CTG 0 - 102790411 102790411 0,0,0 10 110,104,163,134,118,156,126,149,245,129, 0,291,921,2193,4762,5040,6252,6602,6844,7576,
chr11 110231868 110272586 RDX|NM_002906.4|CDS_truncation|CTG 0 - 110231868 110231868 0,0,0 12 165,243,93,161,131,164,97,147,84,275,96,51, 0,1368,4230,5623,15834,22077,23420,25898,26237,32091,32910,40667,
chr11 118263082 118264248 MPZL2|NM_005797.4|overlapping|ACG 0 - 118263082 118263082 0,0,0  2 15,153, 0,1013,
chr11 119029332 119029449 SLC37A4|NM_001164277.1|overlapping|CTG 0 - 119029332 119029332 0,0,0  1 117, 0,
chr11 119029332 119029530 SLC37A4|NM_001164277.1|overlapping|ATG 0 - 119029332 119029332 0,0,0  1 198, 0,
chr11 119045592 119057078 HYOU1|NM_006389.5|CDS_extension|GTG 0 - 119045592 119045592 0,0,0 26 62,51,51,241,85,134,123,88,173,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,59, 0,188,824,969,2141,2354,2655,2883,3121,3425,3963,4184,5442,5845,6226,6497,6702,7044,8528,8901,9391,9592,9900,10157,10477,11427,
chr11 119045592 119057066 HYOU1|NM_006389.5|CDS_extension|GTG 0 - 119045592 119045592 0,0,0 26 62,51,51,241,85,134,123,88,173,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,47, 0,188,824,969,2141,2354,2655,2883,3121,3425,3963,4184,5442,5845,6226,6497,6702,7044,8528,8901,9391,9592,9900,10157,10477,11427,
chr12   4489806   4536206 C12orf4|NM_020374.4|CDS_extension|CTG 0 -   4489806   4489806 0,0,0 13 93,68,58,203,75,129,198,107,122,100,182,146,190, 0,715,1370,10331,15499,27254,28251,28967,35447,35677,40062,44350,46210,
chr12  48768590  48789015 ADCY6|NM_015270.5|CDS_extension|ACG 0 -  48768590  48768590 0,0,0 22 126,125,205,264,130,36,179,159,117,88,98,148,26,129,142,159,128,112,122,150,868,110, 0,346,2175,3119,3704,3917,4878,5349,5811,6100,6366,6712,7082,7372,7618,7837,8513,8819,9024,9517,13980,20315,
chr12  53307488  53321498 AAAS|NM_015665.6|CDS_extension|TTG 0 -  53307488  53307488 0,0,0 16 225,85,82,68,94,91,61,125,121,144,99,47,92,56,128,156, 0,356,563,793,946,1236,1471,1668,2112,6809,7262,7605,7846,8238,13076,13854,
chr12  53307488  53321480 AAAS|NM_015665.6|CDS_extension|CTG 0 -  53307488  53307488 0,0,0 16 225,85,82,68,94,91,61,125,121,144,99,47,92,56,128,138, 0,356,563,793,946,1236,1471,1668,2112,6809,7262,7605,7846,8238,13076,13854,
chr12  64716740  64759330 GNS|NM_002076.4|CDS_extension|CTG 0 -  64716740  64716740 0,0,0 14 79,161,111,108,102,104,119,83,168,99,66,207,60,246, 0,3281,4854,6265,12215,20263,22640,23865,26400,28068,28918,30971,35957,42344,
chr12  94308812  94412466 CEP83|NM_016122.3|CDS_truncation|ATG 0 -  94308812  94308812 0,0,0 15 105,190,104,130,158,76,150,145,115,132,252,132,93,151,149, 0,1105,4101,22887,24669,26776,58981,59244,61109,67073,69978,92037,94357,102884,103505,
chr12 119688231 119877265 CIT|NM_001206999.2|CDS_extension|CTG 0 - 119688231 119688231 0,0,0 48 24,304,180,79,81,129,109,93,140,136,81,170,105,92,181,138,165,163,108,141,105,136,194,198,54,198,175,110,117,96,126,141,54,51,171,120,144,106,184,154,204,94,143,102,176,142,109,17, 0,1919,9427,9744,12513,13392,13618,16131,19947,22019,22308,23946,24359,24971,25236,25965,30013,30467,32246,33077,40270,42263,45932,46928,54179,63818,69139,70359,72707,78855,82553,84538,87554,88126,88440,94286,95676,96728,114974,134588,136933,144539,145854,161942,169291,180828,187841,189017,
chr12 123621755 123633644 EIF2B1|NM_001414.4|CDS_extension|CTG 0 - 123621755 123621755 0,0,0  9 165,126,76,69,113,117,137,102,100, 0,880,3031,4669,5288,8413,8641,10589,11789,
chr13  24883176  24913016 CENPJ|NM_018451.5|CDS_truncation|ATG 0 -  24883176  24883176 0,0,0 16 193,121,85,141,111,65,85,225,166,133,1615,103,109,297,124,435, 0,786,984,1146,2099,2429,6139,9466,16242,20749,22169,23914,24841,26613,28769,29405,
chr13 110641536 110706105 CARS2|NM_024537.4|CDS_extension|CTG 0 - 110641536 110641536 0,0,0 15 72,207,99,124,139,67,68,134,130,84,106,72,118,51,236, 0,778,2848,4430,5564,9497,21914,25803,35437,41514,46184,46410,59901,63984,64333,
chr14  77277375  77320747 POMT2|NM_013382.7|CDS_extension|TTG 0 -  77277375  77277375 0,0,0 21 106,115,141,106,60,72,77,92,152,79,70,67,110,83,107,160,109,109,105,85,314, 0,1018,1353,2447,2645,3016,6421,7574,8105,9368,11386,13938,18788,21313,22079,23714,25459,27316,28961,34573,43058,
chr15  34233880  34318729 SLC12A6|NM_005135.2|CDS_extension|CTG 0 -  34233880  34233880 0,0,0 25 92,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,169, 0,1300,2134,2827,3538,4351,5084,6780,7352,8221,10093,11404,11812,16417,16750,17018,18289,20467,21381,22348,23761,24932,27045,41464,84680,
chr16   4340318   4351261 PAM16|NM_016069.11|CDS_extension|TTG 0 -   4340318   4340318 0,0,0  5 87,66,137,85,30, 0,601,1049,2888,10913,
chr16  14436716  14630176 PARN|NM_002582.4|CDS_extension|CTG 0 -  14436716  14436716 0,0,0 24 56,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,82,68,80,78,70, 0,10171,45921,115304,117348,118937,144157,145464,147630,148032,149601,156584,163187,167429,169767,171564,172341,173927,180873,190389,190552,191455,192880,193390,
chr16  14436716  14630194 PARN|NM_002582.4|CDS_extension|ATT 0 -  14436716  14436716 0,0,0 24 56,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,82,68,80,78,88, 0,10171,45921,115304,117348,118937,144157,145464,147630,148032,149601,156584,163187,167429,169767,171564,172341,173927,180873,190389,190552,191455,192880,193390,
chr16  18793251  18801502 ARL6IP1|NM_015161.3|CDS_extension|GTG 0 -  18793251  18793251 0,0,0  6 119,85,118,120,134,72, 0,1347,2212,4673,5449,8179,
chr17   8174202   8176337 TMEM107|NM_032354.5|CDS_extension|CTG 0 -   8174202   8174202 0,0,0  5 70,97,119,68,138, 0,317,1554,1756,1997,
chr17  18274801  18314874 TOP3A|NM_004618.5|CDS_extension|CTG 0 -  18274801  18274801 0,0,0 19 179,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,276, 0,2873,5734,7896,10340,10605,15755,16040,17843,19901,24757,27083,27462,27778,30310,32089,33549,34080,39797,
chr17  18274801  18314925 TOP3A|NM_004618.5|CDS_extension|CTG 0 -  18274801  18274801 0,0,0 19 179,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,327, 0,2873,5734,7896,10340,10605,15755,16040,17843,19901,24757,27083,27462,27778,30310,32089,33549,34080,39797,
chr17  59697438  59697957 PTRH2|NM_001015509.3|CDS_truncation|ATG 0 -  59697438  59697438 0,0,0  1 519, 0,
chr18  23532201  23586358 NPC1|NM_000271.5|CDS_extension|TTG 0 -  23532201  23532201 0,0,0 25 83,163,114,232,204,130,116,191,90,141,128,115,183,190,103,101,227,371,74,250,168,176,107,123,72, 0,1153,2244,3267,4471,6340,7153,7609,8246,8866,9104,11253,12142,12758,15804,19425,22556,24041,24915,28029,29158,36621,39872,41250,54085,
chr18  23532201  23586430 NPC1|NM_000271.5|CDS_extension|CTG 0 -  23532201  23532201 0,0,0 25 83,163,114,232,204,130,116,191,90,141,128,115,183,190,103,101,227,371,74,250,168,176,107,123,144, 0,1153,2244,3267,4471,6340,7153,7609,8246,8866,9104,11253,12142,12758,15804,19425,22556,24041,24915,28029,29158,36621,39872,41250,54085,
chr18  23532201  23586379 NPC1|NM_000271.5|CDS_extension|ACG 0 -  23532201  23532201 0,0,0 25 83,163,114,232,204,130,116,191,90,141,128,115,183,190,103,101,227,371,74,250,168,176,107,123,93, 0,1153,2244,3267,4471,6340,7153,7609,8246,8866,9104,11253,12142,12758,15804,19425,22556,24041,24915,28029,29158,36621,39872,41250,54085,
chr18  30994469  31042681 DSC3|NM_024423.4|CDS_extension|CTG 0 -  30994469  30994469 0,0,0 16 27,258,122,225,225,143,257,186,135,167,145,156,120,200,85,90, 0,2321,7148,9672,12437,13546,13799,23601,24196,27866,29879,31290,35039,36503,37722,48122,
chr18  30994469  31042732 DSC3|NM_024423.4|CDS_extension|CTG 0 -  30994469  30994469 0,0,0 16 27,258,122,225,225,143,257,186,135,167,145,156,120,200,85,141, 0,2321,7148,9672,12437,13546,13799,23601,24196,27866,29879,31290,35039,36503,37722,48122,
chr18  63331781  63367178 KDSR|NM_002035.4|CDS_extension|CTG 0 -  63331781  63331781 0,0,0 10 120,102,84,84,192,96,66,57,90,168, 0,3475,7018,12628,19106,23422,23716,27954,30997,35229,
chr18  79988466  79988526 TXNL4A|NM_006701.5|non-overlapping|GTG 0 -  79988466  79988466 0,0,0  1 60, 0,
chr18  79973684  79988458 TXNL4A|NM_006701.5|CDS_extension|CTG 0 -  79973684  79973684 0,0,0  3 172,104,219, 0,3913,14555,
chr19  11166557  11194562 KANK2|NM_001136191.3|CDS_extension|CTG 0 -  11166557  11166557 0,0,0 11 54,90,201,143,220,88,240,103,168,1212,88, 0,3319,3490,6423,7915,9344,10020,11787,11995,26273,27917,
chr19  40714622  40716612 COQ8B|NM_024876.4|overlapping|ATG 0 -  40714622  40714622 0,0,0  2 13,26, 0,1964,
chr19  46411193  46413014 CCDC8|NM_032040.5|CDS_extension|ATC 0 -  46411193  46411193 0,0,0  1 1821, 0,
chr19  46411193  46413020 CCDC8|NM_032040.5|CDS_extension|CTG 0 -  46411193  46411193 0,0,0  1 1827, 0,
chr19  47475415  47484157 KPTN|NM_007059.4|CDS_truncation|ATG 0 -  47475415  47475415 0,0,0 12 129,183,136,76,78,110,74,76,55,85,83,223, 0,1116,1387,2290,4447,4882,5344,5542,7745,7879,8086,8519,
chr19  48969287  48993229 GYS1|NM_002103.5|CDS_extension|TTG 0 -  48969287  48969287 0,0,0 16 324,81,164,96,127,114,79,60,107,121,118,145,186,192,182,235, 0,487,1258,1640,4925,5332,8636,8810,12242,12967,13432,16173,16562,17906,22014,23707,
chr19  48969287  48993148 GYS1|NM_002103.5|CDS_extension|CTG 0 -  48969287  48969287 0,0,0 16 324,81,164,96,127,114,79,60,107,121,118,145,186,192,182,154, 0,487,1258,1640,4925,5332,8636,8810,12242,12967,13432,16173,16562,17906,22014,23707,
chr19  49866423  49867507 PNKP|NM_007254.4|overlapping|CTG 0 -  49866423  49866423 0,0,0  3 22,164,39, 0,630,1045,
chr19  54188480  54189378 MBOAT7|NM_024298.5|overlapping|CTG 0 -  54188480  54188480 0,0,0  2 31,41, 0,857,
chr19  55151833  55157610 TNNI3|NM_000363.5|CDS_extension|ATT 0 -  55151833  55151833 0,0,0  8 84,177,90,132,42,84,13,32, 0,2196,2907,4367,4769,5216,5462,5745,
chr19  55151833  55157601 TNNI3|NM_000363.5|CDS_extension|CTG 0 -  55151833  55151833 0,0,0  8 84,177,90,132,42,84,13,23, 0,2196,2907,4367,4769,5216,5462,5745,
chr19  55159061  55166567 DNAAF3|NM_001256714.1|CDS_truncation|CTG 0 -  55159061  55159061 0,0,0 12 388,75,112,136,123,126,183,158,94,206,89,56, 0,471,837,1578,2003,2231,2581,3071,6308,6796,7267,7450,
chr20  34281033  34303285 AHCY|NM_000687.4|CDS_extension|ACG 0 -  34281033  34281033 0,0,0 10 132,195,118,88,208,113,150,76,191,43, 0,4406,9298,9517,9697,10385,11324,13047,14361,22209,
chr21  32601862  32612444 CFAP298|NM_021254.4|CDS_extension|CTG 0 -  32601862  32601862 0,0,0  7 111,96,132,159,68,168,340, 0,409,1298,2262,5786,7975,10242,
chr21  44886367  44920895 ITGB2|NM_000211.5|CDS_extension|GTG 0 -  44886367  44886367 0,0,0 16 63,167,203,220,245,188,141,90,96,156,242,171,181,89,61,75, 0,368,2325,2908,3610,5441,7036,8603,12699,13952,15124,16997,20547,23916,24357,34453,
chr21  44886367  44920880 ITGB2|NM_000211.5|CDS_extension|CTG 0 -  44886367  44886367 0,0,0 16 63,167,203,220,245,188,141,90,96,156,242,171,181,89,61,60, 0,368,2325,2908,3610,5441,7036,8603,12699,13952,15124,16997,20547,23916,24357,34453,
chr21  44886367  44920910 ITGB2|NM_000211.5|CDS_extension|CTG 0 -  44886367  44886367 0,0,0 16 63,167,203,220,245,188,141,90,96,156,242,171,181,89,61,90, 0,368,2325,2908,3610,5441,7036,8603,12699,13952,15124,16997,20547,23916,24357,34453,
chr22  19176129  19178724 SLC25A1|NM_005984.5|CDS_extension|CTG 0 -  19176129  19176129 0,0,0  9 115,74,116,105,85,139,100,108,145, 0,291,448,716,990,1597,1812,2003,2450,
chr22  36758310  36775827 IFT27|NM_006860.5|CDS_extension|ATC 0 -  36758310  36758310 0,0,0  7 99,110,118,60,60,77,154, 0,4593,5608,7827,8995,9472,17363,
chr22  36758310  36775839 IFT27|NM_006860.5|CDS_extension|CTG 0 -  36758310  36758310 0,0,0  7 99,110,118,60,60,77,166, 0,4593,5608,7827,8995,9472,17363,
chr22  36758310  36776034 IFT27|NM_006860.5|CDS_extension|CTG 0 -  36758310  36758310 0,0,0  7 99,110,118,60,60,77,361, 0,4593,5608,7827,8995,9472,17363,
chr22  36758310  36776070 IFT27|NM_006860.5|CDS_extension|ATC 0 -  36758310  36758310 0,0,0  7 99,110,118,60,60,77,397, 0,4593,5608,7827,8995,9472,17363,
chr22  38112160  38181693 PLA2G6|NM_003560.4|CDS_extension|TTG 0 -  38112160  38112160 0,0,0 17 145,74,168,155,137,151,164,79,162,109,183,97,188,184,216,254,30, 0,343,1326,3366,3914,8598,10934,14210,16108,17293,20670,22827,27821,30944,33277,57057,69503,
chr22  38779448  38782773 DNAL4|NM_005740.3|CDS_extension|CTG 0 -  38779448  38779448 0,0,0  3 165,84,111, 0,1477,3214,
chr22  42070307  42070343 NAGA|NM_000262.3|non-overlapping|ACG 0 -  42070307  42070307 0,0,0  1 36, 0,
chrX  38285539  38327403 RPGR|NM_001034853.2|CDS_extension|CTG 0 -  38285539  38285539 0,0,0 15 1706,181,66,92,169,186,125,156,159,150,159,63,93,126,64, 0,2321,5419,5853,11744,13416,15707,19095,25075,31776,33289,35487,37313,37859,41800,
chrX  64917782  64976425 ZC4H2|NM_018684.4|CDS_extension|CTG 0 -  64917782  64917782 0,0,0  5 114,163,173,172,101, 0,1259,2298,4034,58542,
chrX 110676230 110792205 CHRDL1|NM_001143981.2|CDS_extension|CTG 0 - 110676230 110676230 0,0,0 11 131,90,168,210,169,68,94,146,94,113,118, 0,3105,5251,12363,17932,24423,43604,45154,83430,86464,115857,
chr1  42456574  42459926 PPCS|NM_024664.4|CDS_truncation|ATG 0 +  42456574  42456574 0,0,0  3 499,104,324, 0,672,3028,
chr1 161766390 161958654 ATF6|NM_007348.4|CDS_truncation|ATG 0 + 161766390 161766390 0,0,0 16 52,77,88,107,130,204,221,186,92,132,114,100,71,115,85,209, 0,11853,15521,17599,25017,25733,35661,53242,54679,80058,85331,86833,93816,96807,145905,192055,
chr12  48106046  48107381 PFKM|NM_001166686.2|overlapping|ATG 0 +  48106046  48106046 0,0,0  2 91,17, 0,1318,
chr3 196708680 196711953 CEP19|NM_032898.5|non-overlapping|ATG 0 - 196708680 196708680 0,0,0  2 47,25, 0,3248,
chr10  99782739  99782808 ABCC2|NM_000392.5|non-overlapping|ATG 0 +  99782739  99782739 0,0,0  1 69, 0,
chr10  99782707  99782746 ABCC2|NM_000392.5|non-overlapping|ATG 0 +  99782707  99782707 0,0,0  1 39, 0,
chr10  99782698  99782746 ABCC2|NM_000392.5|non-overlapping|ATG 0 +  99782698  99782698 0,0,0  1 48, 0,
chr10  99782645  99782681 ABCC2|NM_000392.5|non-overlapping|ATG 0 +  99782645  99782645 0,0,0  1 36, 0,
chr10  99782671  99782698 ABCC2|NM_000392.5|non-overlapping|ATG 0 +  99782671  99782671 0,0,0  1 27, 0,
chr2   9555601   9555631 ADAM17|NM_003183.6|overlapping|GTG 0 -   9555601   9555601 0,0,0  1 30, 0,
chr15 100341951 100341987 ADAMTS17|NM_139057.4|non-overlapping|CTG 0 - 100341951 100341951 0,0,0  1 36, 0,
chr10  74176821  74176827 ADK|NM_001123.4|non-overlapping|ACG 0 +  74176821  74176821 0,0,0  1 6, 0,
chr7  17298883  17298913 AHR|NM_001621.5|non-overlapping|GTG 0 +  17298883  17298883 0,0,0  1 30, 0,
chr10  95653370  95656708 ALDH18A1|NM_002860.4|overlapping|GTG 0 -  95653370  95653370 0,0,0  2 35,112, 0,3226,
chr15  50908720  50912112 AP4E1|NM_007347.5|overlapping|ATG 0 +  50908720  50908720 0,0,0  2 208,35, 0,3357,
chr1 155978191 155978479 ARHGEF2|NM_004723.4|non-overlapping|ATA 0 - 155978191 155978191 0,0,0  1 288, 0,
chr16  57245253  57252267 ARL2BP|NM_012106.4|CDS_extension|CTG 0 +  57245253  57245253 0,0,0  6 152,62,107,86,97,102, 0,826,3283,4513,5157,6912,
chr16  57245200  57245263 ARL2BP|NM_012106.4|non-overlapping|GTG 0 +  57245200  57245200 0,0,0  1 63, 0,
chr16  57245229  57245247 ARL2BP|NM_012106.4|non-overlapping|CTG 0 +  57245229  57245229 0,0,0  1 18, 0,
chr16  57245264  57245294 ARL2BP|NM_012106.4|non-overlapping|CTG 0 +  57245264  57245264 0,0,0  1 30, 0,
chr10  87818162  87818201 ATAD1|NM_032810.4|non-overlapping|CTG 0 -  87818162  87818162 0,0,0  1 39, 0,
chrX  77971627  77971663 ATP7A|NM_000052.7|overlapping|ATG 0 +  77971627  77971627 0,0,0  1 36, 0,
chr17  18038964  18039093 ATPAF2|NM_145691.4|overlapping|GTG 0 -  18038964  18038964 0,0,0  1 129, 0,
chr19  45178767  45178794 BLOC1S3|NM_212550.5|non-overlapping|ACG 0 +  45178767  45178767 0,0,0  1 27, 0,
chr15  36579816  36579864 C15orf41|NM_001130010.3|overlapping|GTG 0 +  36579816  36579816 0,0,0  1 48, 0,
chr2  27217491  27243518 CAD|NM_004341.5|CDS_extension|GTG 0 +  27217491  27217491 0,0,0 44 142,140,130,143,142,172,186,113,146,132,234,222,189,125,131,113,245,247,99,225,183,219,168,183,105,240,82,167,165,132,202,191,141,102,97,45,170,75,213,126,156,102,95,103, 0,385,3726,4702,5027,5374,6071,6425,6853,7253,7518,8213,8639,9033,9340,13976,14488,14956,15550,15820,16134,16516,17026,17753,18044,18792,19257,19887,20226,20564,20939,21550,21839,22205,22773,23419,23566,23830,24419,24810,25128,25380,25706,25924,
chr2 201233495 201233558 CASP8|NM_001228.4|non-overlapping|CTG 0 + 201233495 201233495 0,0,0  1 63, 0,
chr7 151057884 151057905 CDK5|NM_004935.4|non-overlapping|ACG 0 - 151057884 151057884 0,0,0  1 21, 0,
chr7  92833670  92833685 CDK6|NM_001259.8|non-overlapping|ATG 0 -  92833670  92833670 0,0,0  1 15, 0,
chr20  35455429  35455447 CEP250|NM_007186.6|non-overlapping|CTG 0 +  35455429  35455429 0,0,0  1 18, 0,
chr20  35455382  35455520 CEP250|NM_007186.6|non-overlapping|CTG 0 +  35455382  35455382 0,0,0  1 138, 0,
chr11  67373623  67373704 CLCF1|NM_013246.3|non-overlapping|ATG 0 -  67373623  67373623 0,0,0  1 81, 0,
chr8   1770938   1770950 CLN8|NM_018941.4|non-overlapping|ATG 0 +   1770938   1770938 0,0,0  1 12, 0,
chr4 186191742 186210641 CYP4V2|NM_207352.4|CDS_extension|GTG 0 + 186191742 186191742 0,0,0 11 295,113,86,191,70,127,186,103,135,180,173, 0,2757,4260,5197,5790,7214,9414,13457,17122,17350,18726,
chr4 186191639 186194521 CYP4V2|NM_207352.4|overlapping|GTG 0 + 186191639 186191639 0,0,0  2 398,22, 0,2860,
chr8  38231803  38233065 DDHD2|NM_015214.3|overlapping|ATG 0 +  38231803  38231803 0,0,0  2 56,79, 0,1183,
chrX 154762885 154764901 DKC1|NM_001363.5|overlapping|CTG 0 + 154762885 154762885 0,0,0  2 96,3, 0,2013,
chr9 128947549 128947597 DOLK|NM_014908.4|non-overlapping|ATG 0 - 128947549 128947549 0,0,0  1 48, 0,
chr6 116371042 116371051 DSE|NM_013352.4|non-overlapping|CTG 0 + 116371042 116371042 0,0,0  1 9, 0,
chr9 108931060 108931195 ELP1|NM_003640.5|overlapping|ATG 0 - 108931060 108931060 0,0,0  1 135, 0,
chr12  15682959  15789183 EPS8|NM_004447.6|non-overlapping|GTG 0 -  15682959  15682959 0,0,0  2 13,23, 0,106201,
chr8  27774575  27803438 ESCO2|NM_001017420.3|CDS_extension|CTG 0 +  27774575  27774575 0,0,0 11 32,69,808,94,58,118,132,90,144,176,133, 0,923,1786,5598,9424,13309,14271,17387,18092,24965,28730,
chr8  27774566  27803438 ESCO2|NM_001017420.3|CDS_extension|CTG 0 +  27774566  27774566 0,0,0 11 41,69,808,94,58,118,132,90,144,176,133, 0,932,1795,5607,9433,13318,14280,17396,18101,24974,28739,
chr19  48965402  48966735 FTL|NM_000146.4|CDS_extension|ATT 0 +  48965402  48965402 0,0,0  4 207,147,126,153, 0,367,878,1180,
chr5  39202968  39202986 FYB1|NM_001465.6|non-overlapping|ATG 0 -  39202968  39202968 0,0,0  1 18, 0,
chr8 101492727 101666703 GRHL2|NM_024915.4|CDS_extension|CTG 0 + 101492727 101492727 0,0,0 16 62,196,68,394,56,157,112,95,159,88,140,32,95,86,65,115, 0,50513,59987,65691,77611,80940,84680,106329,126811,138909,139498,144169,151403,156686,171726,173861,
chr10  94545834  94545855 HELLS|NM_018063.5|non-overlapping|CTG 0 +  94545834  94545834 0,0,0  1 21, 0,
chr10  94545871  94546421 HELLS|NM_018063.5|overlapping|ATT 0 +  94545871  94545871 0,0,0  2 81,45, 0,505,
chr10  94545810  94545855 HELLS|NM_018063.5|non-overlapping|CTG 0 +  94545810  94545810 0,0,0  1 45, 0,
chr8  42272089  42272104 IKBKB|NM_001556.3|overlapping|ACG 0 +  42272089  42272089 0,0,0  1 15, 0,
chr16  54930870  54931302 IRX5|NM_005853.6|overlapping|TTG 0 +  54930870  54930870 0,0,0  1 432, 0,
chr20   3209501   3209591 ITPA|NM_033453.4|overlapping|CTG 0 +   3209501   3209501 0,0,0  1 90, 0,
chr2  27087082  27099750 KHK|NM_000221.3|CDS_extension|CTG 0 +  27087082  27087082 0,0,0  8 269,117,135,73,147,89,158,86, 0,5249,7394,9646,10420,12113,12337,12582,
chr22  29073058  29073124 KREMEN1|NM_032045.5|non-overlapping|ATG 0 +  29073058  29073058 0,0,0  1 66, 0,
chrX  65534761  65534770 LAS1L|NM_031206.7|non-overlapping|CTG 0 -  65534761  65534761 0,0,0  1 9, 0,
chr1  25543653  25566992 LDLRAP1|NM_015627.3|CDS_extension|ACG 0 +  25543653  25543653 0,0,0  9 133,143,113,115,73,84,131,35,145, 0,10268,11206,13499,18990,19416,20007,21519,23194,
chr5  71587393  71587441 MCCC2|NM_022132.5|overlapping|CTG 0 +  71587393  71587393 0,0,0  1 48, 0,
chrX 154092264 154092270 MECP2|NM_004992.4|non-overlapping|ATG 0 - 154092264 154092264 0,0,0  1 6, 0,
chrX 154092257 154092263 MECP2|NM_004992.4|non-overlapping|ATG 0 - 154092257 154092257 0,0,0  1 6, 0,
chr17  76726974  76733686 METTL23|NM_001080510.5|CDS_extension|ACG 0 +  76726974  76726974 0,0,0  5 204,105,238,85,166, 0,2715,6003,6318,6546,
chr2  15167047  15561277 NBAS|NM_015909.4|CDS_truncation|TTG 0 -  15167047  15167047 0,0,0 52 276,129,139,140,196,90,203,219,335,251,111,230,138,77,121,114,168,90,158,114,114,113,230,103,123,63,134,174,186,154,84,137,105,79,141,152,126,258,194,64,129,69,139,99,134,134,44,48,78,37,55,90, 0,11940,19694,23216,51725,65374,67497,71420,108436,109803,120025,125489,141168,142123,160702,161151,163550,184944,186505,189255,199532,207560,212554,216167,227179,229365,235120,248498,250479,257267,260663,294153,294639,300281,300616,301334,306174,307019,308639,311178,321846,337097,344164,367495,369370,372175,384445,386378,387013,389735,391532,394140,
chr5  60945148  60945313 NDUFAF2|NM_174889.5|overlapping|ATG 0 +  60945148  60945148 0,0,0  1 165, 0,
chr2 206159370 206159388 NDUFS1|NM_005006.7|non-overlapping|GTG 0 - 206159370 206159370 0,0,0  1 18, 0,
chr8  24952809  24956575 NEFL|NM_006158.5|CDS_extension|CTG 0 -  24952809  24952809 0,0,0  4 143,320,125,1104, 0,666,1371,2662,
chr14  75124186  75126998 NEK9|NM_033116.6|overlapping|CTG 0 -  75124186  75124186 0,0,0  2 37,296, 0,2516,
chr14  75084563  75126984 NEK9|NM_033116.6|CDS_extension|ACG 0 -  75084563  75084563 0,0,0 22 123,213,162,209,60,171,162,109,156,47,201,145,193,51,65,111,132,106,71,56,178,282, 0,2454,3916,6706,10808,12536,16428,17093,19278,21386,21938,22779,25121,25757,28775,29639,32631,34266,35946,36555,39482,42139,
chr14  75126994  75127018 NEK9|NM_033116.6|non-overlapping|ACG 0 -  75126994  75126994 0,0,0  1 24, 0,
chr10 103181288 103193258 NT5C2|NM_012229.5|non-overlapping|ATT 0 - 103181288 103181288 0,0,0  2 40,23, 0,11947,
chr10 103181288 103181294 NT5C2|NM_012229.5|non-overlapping|ATG 0 - 103181288 103181288 0,0,0  1 6, 0,
chrX 129540384 129540823 OCRL|NM_000276.4|overlapping|GTG 0 + 129540384 129540384 0,0,0  2 94,80, 0,359,
chr7  44624322  44707999 OGDH|NM_002541.4|CDS_extension|GTG 0 +  44624322  44624322 0,0,0 22 243,192,103,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,121, 0,21004,23334,42413,49464,50088,50855,51647,57397,69502,70101,71702,72106,72591,73047,73281,73869,75818,77220,82902,83259,83556,
chr2 196841233 196926706 PGAP1|NM_024989.4|CDS_extension|GTG 0 - 196841233 196841233 0,0,0 27 139,105,188,51,136,198,91,94,39,109,67,52,74,76,78,52,47,84,56,106,67,53,158,172,176,154,237, 0,1487,2654,3290,4648,5769,6713,23753,29707,31207,31726,32294,32451,34512,38842,44190,44600,49594,51112,51906,55897,57083,61351,71648,75184,78763,85236,
chr19   7534751   7534784 PNPLA6|NM_001166111.2|non-overlapping|ATG 0 +   7534751   7534751 0,0,0  1 33, 0,
chr10  78029502  78029520 POLR3A|NM_007055.4|non-overlapping|ATG 0 -  78029502  78029502 0,0,0  1 18, 0,
chr2 178451046 178451130 PRKRA|NM_003690.5|non-overlapping|GTG 0 - 178451046 178451046 0,0,0  1 84, 0,
chr3  93874244  93973872 PROS1|NM_000313.4|CDS_extension|CTG 0 -  93874244  93874244 0,0,0 15 161,226,152,169,168,190,116,122,126,132,123,87,25,158,199, 0,2721,4918,10483,12091,18688,22331,24203,26559,31539,31776,36374,49995,53005,99429,
chrX 155264379 155264496 RAB39B|NM_171998.4|non-overlapping|ATG 0 - 155264379 155264379 0,0,0  1 117, 0,
chr4  76213555  76213795 SCARB2|NM_005506.4|non-overlapping|ACG 0 -  76213555  76213555 0,0,0  1 240, 0,
chr4  76195838  76213652 SCARB2|NM_005506.4|overlapping|GTG 0 -  76195838  76195838 0,0,0  2 26,226, 0,17588,
chr11  75566322  75572083 SERPINH1|NM_001235.5|CDS_extension|GTG 0 +  75566322  75566322 0,0,0  4 649,99,233,303, 0,2408,2616,5458,
chr17   3636218   3636245 SHPK|NM_013276.4|non-overlapping|CTG 0 -   3636218   3636218 0,0,0  1 27, 0,
chr1  99970024 100022476 SLC35A3|NM_012243.3|CDS_extension|GTG 0 +  99970024  99970024 0,0,0  8 138,205,155,123,169,119,134,91, 0,23512,29236,37009,41340,45277,47657,52361,
chr11  45805153  45805267 SLC35C1|NM_018389.5|non-overlapping|ATG 0 +  45805153  45805153 0,0,0  1 114, 0,
chr8  22367375  22419698 SLC39A14|NM_015359.6|CDS_extension|CTG 0 +  22367375  22367375 0,0,0  9 33,285,187,170,123,189,208,185,147, 0,37320,40934,42570,47404,48393,48697,50275,52176,
chr17  63842631  63842892 SMARCD2|NM_001098426.2|overlapping|CTG 0 -  63842631  63842631 0,0,0  1 261, 0,
chr19  38264575  38264623 SPINT2|NM_021102.4|non-overlapping|ATT 0 +  38264575  38264575 0,0,0  1 48, 0,
chr3  31532632  31532776 STT3B|NM_178862.3|non-overlapping|ATG 0 +  31532632  31532632 0,0,0  1 144, 0,
chr2  70212718  70248541 TIA1|NM_022173.4|CDS_extension|CTG 0 -  70212718  70212718 0,0,0 13 127,146,124,85,96,109,76,88,33,55,99,97,137, 0,1630,2652,3489,3685,4167,11835,15016,16340,16545,18037,23360,35686,
chr3   3129013   3129028 TRNT1|NM_182916.3|non-overlapping|ATG 0 +   3129013   3129013 0,0,0  1 15, 0,
chr12  47844745  47882727 VDR|NM_001017535.2|CDS_extension|CTG 0 -  47844745  47844745 0,0,0  9 260,117,152,172,121,185,131,148,34, 0,1589,1911,10884,12383,12758,20301,34222,37948,
chr9   2622022   2639861 VLDLR|NM_003383.5|overlapping|GTG 0 +   2622022   2622022 0,0,0  3 249,120,3, 0,13430,17836,
chr14  96797415  96833563 VRK1|NM_003384.3|overlapping|CTG 0 +  96797415  96797415 0,0,0  2 32,97, 0,36051,
chr2  19913557  19990084 WDR35|NM_001006657.2|CDS_extension|ATT 0 -  19913557  19913557 0,0,0 28 151,241,157,141,165,111,133,147,204,137,81,211,110,54,70,145,61,33,186,126,146,166,134,129,93,72,118,93, 0,479,16838,17711,18725,19843,21913,22661,24185,24707,28201,32228,32903,34606,37857,40276,46996,48737,53166,55922,60005,60910,61972,65193,67133,68905,75607,76434,
chr22  40857117  40881980 XPNPEP3|NM_022098.4|overlapping|CTG 0 +  40857117  40857117 0,0,0  3 128,117,211, 0,11881,24652,
chr11  46700887  46700932 ZNF408|NM_024741.3|non-overlapping|CTG 0 +  46700887  46700887 0,0,0  1 45, 0,
chr11  46700928  46700982 ZNF408|NM_024741.3|non-overlapping|ATG 0 +  46700928  46700928 0,0,0  1 54, 0,
chr2 148021529 148178739 MBD5|NM_001378120.1|non-overlapping|CTG 0 + 148021529 148021529 0,0,0  2 155,40, 0,157170,
chr12  70243450  70278191 CNOT2|NM_014515.5|non-overlapping|TTG 0 +  70243450  70243450 0,0,0  2 30,60, 0,34681,
chr3  63863856  63863892 THOC7|NM_025075.3|non-overlapping|ATG 0 -  63863856  63863856 0,0,0  1 36, 0,
chr5 112707525 112707543 APC|NM_001127511.2|non-overlapping|ATG 0 + 112707525 112707525 0,0,0  1 18, 0,
chr5 112707636 112707672 APC|NM_001127511.2|non-overlapping|ATG 0 + 112707636 112707636 0,0,0  1 36, 0,
chr6  10528668  10528722 GCNT2|NM_145649.4|non-overlapping|ATG 0 +  10528668  10528668 0,0,0  1 54, 0,
chr6  10528817  10528850 GCNT2|NM_145649.4|non-overlapping|ATG 0 +  10528817  10528817 0,0,0  1 33, 0,
chr10  28532786  28532897 WAC|NM_100264.2|non-overlapping|ATG 0 +  28532786  28532786 0,0,0  1 111, 0,
chr11  59142784  59142880 FAM111A|NM_001142519.2|non-overlapping|GTG 0 +  59142784  59142784 0,0,0  1 96, 0,
chr11  59142881  59143275 FAM111A|NM_001142519.2|non-overlapping|ATG 0 +  59142881  59142881 0,0,0  2 65,193, 0,201,
chr11  59143217  59143304 FAM111A|NM_001142519.2|non-overlapping|CTG 0 +  59143217  59143217 0,0,0  1 87, 0,
chr17  35147825  35147906 UNC45B|NM_001267052.1|non-overlapping|CTG 0 +  35147825  35147825 0,0,0  1 81, 0,
chr17  35147833  35148291 UNC45B|NM_001267052.1|overlapping|CTG 0 +  35147833  35147833 0,0,0  2 77,28, 0,430,
chr17  35147883  35186559 UNC45B|NM_001267052.1|CDS_extension|ATC 0 +  35147883  35147883 0,0,0 20 27,168,37,176,90,168,169,171,172,301,95,142,141,128,67,114,116,118,156,261, 0,380,1089,2164,5009,6690,7412,11491,16111,20177,21953,22230,23438,26358,28084,29133,29611,32675,35543,38415,
chr1 154584805 154627959 ADAR|NM_001025107.2|CDS_extension|CTG 0 - 154584805 154584805 0,0,0 15 238,128,113,183,134,123,94,172,226,191,145,149,184,1586,105, 0,411,947,1375,3319,3745,4563,4951,5378,11999,12317,13022,13596,16235,43049,
chr2 157818422 157875862 ACVR1|NM_001111067.4|non-overlapping|CTG 0 - 157818422 157818422 0,0,0  2 137,67, 0,57373,
chr2 157818543 157875992 ACVR1|NM_001111067.4|non-overlapping|CTG 0 - 157818543 157818543 0,0,0  2 16,197, 0,57252,
chr2 157818523 157876056 ACVR1|NM_001111067.4|non-overlapping|CTG 0 - 157818523 157818523 0,0,0  2 36,261, 0,57272,
chr2 157818523 157876200 ACVR1|NM_001111067.4|non-overlapping|GTG 0 - 157818523 157818523 0,0,0  2 36,405, 0,57272,
chr2 157818422 157876261 ACVR1|NM_001111067.4|non-overlapping|ACG 0 - 157818422 157818422 0,0,0  2 137,466, 0,57373,
chr3  38029577  38029583 PLCD1|NM_006225.3|non-overlapping|AAG 0 -  38029577  38029577 0,0,0  1 6, 0,
chr3  38029577  38029595 PLCD1|NM_006225.3|non-overlapping|CTG 0 -  38029577  38029577 0,0,0  1 18, 0,
chr5 132227194 132227819 P4HA2|NM_001142598.1|non-overlapping|CTG 0 - 132227194 132227194 0,0,0  2 27,30, 0,595,
chr11  62709280  62709298 BSCL2|NM_001386027.1|non-overlapping|ATG 0 -  62709280  62709280 0,0,0  1 18, 0,
chr11  62709280  62709355 BSCL2|NM_001386027.1|non-overlapping|GTG 0 -  62709280  62709280 0,0,0  1 75, 0,
chr11  62709365  62709434 BSCL2|NM_001386027.1|non-overlapping|TTG 0 -  62709365  62709365 0,0,0  1 69, 0,
chr11  62709435  62709501 BSCL2|NM_001386027.1|non-overlapping|CTG 0 -  62709435  62709435 0,0,0  1 66, 0,
chr11  68213581  68213587 KMT5B|NM_001300909.1|non-overlapping|AGG 0 -  68213581  68213581 0,0,0  1 6, 0,
chr11  68213581  68213590 KMT5B|NM_001300909.1|non-overlapping|ATG 0 -  68213581  68213581 0,0,0  1 9, 0,
chr19  45782407  45782455 DMPK|NM_001288764.1|non-overlapping|ATG 0 -  45782407  45782407 0,0,0  1 48, 0,
chr17  46171959  46192876 KANSL1|NM_015443.3|overlapping|CTG 0 -  46171959  46171959 0,0,0  2 273,54, 0,20863,
chr6  10527476  10527509 GCNT2|NM_145649.4|non-overlapping|ATG 0 +  10527476  10527476 0,0,0  1 33, 0,
chr1  32251302  32251323 LCK|NM_001330468.1|non-overlapping|CTG 0 +  32251302  32251302 0,0,0  1 21, 0,
chr1  32251341  32274411 LCK|NM_001330468.1|overlapping|ATG 0 +  32251341  32251341 0,0,0  2 30,87, 0,22983,
chr2  73385780  73408674 ALMS1|NM_015120.4|overlapping|CTG 0 +  73385780  73385780 0,0,0  2 412,53, 0,22841,
chr4 122152407 122152443 KIAA1109|NM_001384125.1|non-overlapping|CTG 0 + 122152407 122152407 0,0,0  1 36, 0,
chr4 122152473 122154033 KIAA1109|NM_001384125.1|non-overlapping|CTG 0 + 122152473 122152473 0,0,0  2 111,9, 0,1551,
chr4 122154034 122154061 KIAA1109|NM_001384125.1|non-overlapping|ATG 0 + 122154034 122154034 0,0,0  1 27, 0,
chr8  98117322  98123423 POP1|NM_001145860.1|overlapping|TTG 0 +  98117322  98117322 0,0,0  2 68,88, 0,6013,
chr8  98117330  98123377 POP1|NM_001145860.1|overlapping|GTG 0 +  98117330  98117330 0,0,0  2 60,42, 0,6005,
chr8  98117358  98123423 POP1|NM_001145860.1|overlapping|CTG 0 +  98117358  98117358 0,0,0  2 32,88, 0,5977,
chr9  69151669  69254374 TJP2|NM_001170414.2|CDS_extension|CTG 0 +  69151669  69151669 0,0,0 21 102,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,86,166, 0,60878,64669,66587,69217,73634,74352,76095,76311,77514,78412,82769,84358,85279,86208,87040,88267,95020,96342,101145,102539,
chr9  69151691  69212569 TJP2|NM_001170414.2|overlapping|ATT 0 +  69151691  69151691 0,0,0  2 80,22, 0,60856,
chr9  69151742  69212569 TJP2|NM_001170414.2|overlapping|CTG 0 +  69151742  69151742 0,0,0  2 29,22, 0,60805,
chr11  66257347  66257488 KLC2|NM_001134775.1|non-overlapping|ATG 0 +  66257347  66257347 0,0,0  1 141, 0,
chr11  66257465  66258604 KLC2|NM_001134775.1|overlapping|ATG 0 +  66257465  66257465 0,0,0  2 23,58, 0,1081,
chr11  72080783  72080807 LRTOMT|NM_145309.6|non-overlapping|ATG 0 +  72080783  72080783 0,0,0  1 24, 0,
chr11  72080821  72080836 LRTOMT|NM_145309.6|non-overlapping|ATG 0 +  72080821  72080821 0,0,0  1 15, 0,
chr12  52948908  52950374 KRT18|NM_199187.1|overlapping|ATG 0 +  52948908  52948908 0,0,0  3 30,418,47, 0,264,1419,
chr19   7395142   7440418 ARHGEF18|NM_015318.3|overlapping|CTG 0 +   7395142   7395142 0,0,0  2 105,75, 0,45201,
chr19   7395160   7440418 ARHGEF18|NM_015318.3|overlapping|CTG 0 +   7395160   7395160 0,0,0  2 87,75, 0,45183,
chr19   7395200   7441676 ARHGEF18|NM_015318.3|overlapping|GTG 0 +   7395200   7395200 0,0,0  3 47,139,24, 0,45143,46452,
chr19   7395212   7441676 ARHGEF18|NM_015318.3|overlapping|CTG 0 +   7395212   7395212 0,0,0  3 35,139,24, 0,45131,46440,
chr19   7395227   7441676 ARHGEF18|NM_015318.3|overlapping|CTG 0 +   7395227   7395227 0,0,0  3 20,139,24, 0,45116,46425,
chr14  34713542  34714569 CFL2|NM_138638.4|overlapping|CTG 0 -  34713542  34713542 0,0,0  2 19,32, 0,995,
chr14  34713538  34714592 CFL2|NM_138638.4|overlapping|GTG 0 -  34713538  34713538 0,0,0  2 23,55, 0,999,
chr17  69314390  69327095 ABCA5|NM_172232.3|overlapping|CTG 0 -  69314390  69314390 0,0,0  2 40,44, 0,12661,
chr1  23795948  23800734 GALE|NM_001008216.1|CDS_extension|GTG 0 -  23795948  23795948 0,0,0 12 59,115,78,86,67,114,177,114,116,126,71,23, 0,202,560,748,927,1085,1746,2168,2666,2938,3417,4763,
chr6 105101088 105137059 BVES|NM_001199563.1|CDS_extension|CTG 0 - 105101088 105101088 0,0,0  8 125,142,168,109,188,125,237,91, 0,14597,15612,23458,24302,28290,32263,35880,
chrX 153723286 153724345 BCAP31|NM_005745.7|non-overlapping|GTG 0 - 153723286 153723286 0,0,0  2 2,145, 0,914,
chr4   5711242   5711371 EVC|NM_153717.3|non-overlapping|CTG 0 +   5711242   5711242 0,0,0  1 129, 0,
chr9  69151651  69254374 TJP2|NM_001170414.2|CDS_extension|GTG 0 +  69151651  69151651 0,0,0 21 120,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,86,166, 0,60896,64687,66605,69235,73652,74370,76113,76329,77532,78430,82787,84376,85297,86226,87058,88285,95038,96360,101163,102557,
chr15  63775629  63775644 HERC1|NM_003922.4|non-overlapping|ATG 0 -  63775629  63775629 0,0,0  1 15, 0,
chr1  28887086  28887149 EPB41|NM_004437.4|non-overlapping|ATG 0 +  28887086  28887086 0,0,0  1 63, 0,
chr1  28914622  29065179 EPB41|NM_001166006.1|CDS_extension|CTG 0 +  28914622  28914622 0,0,0 15 146,475,213,105,43,76,219,88,153,98,173,209,57,63,198, 0,72808,78707,82592,97242,101069,103601,115777,118470,121203,124631,138481,143966,145799,150359,
chr1  28914707  28987441 EPB41|NM_001166006.1|overlapping|CTG 0 +  28914707  28914707 0,0,0  2 61,11, 0,72723,
chr1 151282343 151285255 ZNF687|NM_001304763.1|non-overlapping|CTG 0 + 151282343 151282343 0,0,0  2 52,50, 0,2862,
chr1 151285246 151285255 ZNF687|NM_001304763.1|non-overlapping|ATG 0 + 151285246 151285246 0,0,0  1 9, 0,
chr1 155308975 155309074 FDPS|NM_001135821.1|non-overlapping|ATG 0 + 155308975 155308975 0,0,0  1 99, 0,
chr3  23917129  23917177 RPL15|NM_001253383.2|non-overlapping|GTG 0 +  23917129  23917129 0,0,0  1 48, 0,
chr3  23917178  23917187 RPL15|NM_001253383.2|non-overlapping|CTG 0 +  23917178  23917178 0,0,0  1 9, 0,
chr3  50617160  50617549 MAPKAPK3|NM_001243925.1|non-overlapping|CTG 0 +  50617160  50617160 0,0,0  2 81,36, 0,353,
chr3  50617533  50617683 MAPKAPK3|NM_001243925.1|overlapping|CTG 0 +  50617533  50617533 0,0,0  1 150, 0,
chr8  22999844  22999937 RHOBTB2|NM_015178.3|non-overlapping|ATG 0 +  22999844  22999844 0,0,0  1 93, 0,
chr8  23000039  23004445 RHOBTB2|NM_015178.3|overlapping|ATG 0 +  23000039  23000039 0,0,0  2 66,21, 0,4385,
chr8  22999651  22999819 RHOBTB2|NM_015178.3|non-overlapping|ATG 0 +  22999651  22999651 0,0,0  1 168, 0,
chr9 128689276 128689504 SET|NM_003011.4|non-overlapping|CTG 0 + 128689276 128689276 0,0,0  1 228, 0,
chr9 130835296 130835329 ABL1|NM_005157.6|non-overlapping|ATG 0 + 130835296 130835296 0,0,0  1 33, 0,
chr9 130714089 130714203 ABL1|NM_007313.2|non-overlapping|ATG 0 + 130714089 130714089 0,0,0  1 114, 0,
chr18  34710301  34710322 DTNA|NM_001386777.1|non-overlapping|ATG 0 +  34710301  34710301 0,0,0  1 21, 0,
chr20  37346187  37365231 SRC|NM_198291.3|non-overlapping|CTG 0 +  37346187  37346187 0,0,0  2 68,28, 0,19016,
chr20  37365247  37365271 SRC|NM_198291.3|non-overlapping|ATG 0 +  37365247  37365247 0,0,0  1 24, 0,
chr3 114500383 114624919 ZBTB20|NM_001164346.2|non-overlapping|ATG 0 - 114500383 114500383 0,0,0  2 8,43, 0,124493,
chr3 128487820 128487889 GATA2|NM_001145661.2|non-overlapping|ATG 0 - 128487820 128487820 0,0,0  1 69, 0,
chr9  83978378  83980168 HNRNPK|NM_031263.4|non-overlapping|ACG 0 -  83978378  83978378 0,0,0  2 74,16, 0,1774,
chr9  83978378  83980192 HNRNPK|NM_031263.4|non-overlapping|CTG 0 -  83978378  83978378 0,0,0  2 74,40, 0,1774,
chr11  31811197  31811260 PAX6|NM_001258465.3|non-overlapping|CTG 0 -  31811197  31811197 0,0,0  1 63, 0,
chr11  31811197  31811221 PAX6|NM_001258465.3|non-overlapping|ATG 0 -  31811197  31811197 0,0,0  1 24, 0,
chr11  31811186  31811198 PAX6|NM_001258465.3|non-overlapping|ATG 0 -  31811186  31811186 0,0,0  1 12, 0,
chr12   6374880   6375105 SCNN1A|NM_001159576.2|overlapping|GTG 0 -   6374880   6374880 0,0,0  1 225, 0,
chr12   6375067   6375172 SCNN1A|NM_001159576.2|non-overlapping|CTG 0 -   6375067   6375067 0,0,0  1 105, 0,
chr12   6375120   6375186 SCNN1A|NM_001159576.2|non-overlapping|CTG 0 -   6375120   6375120 0,0,0  1 66, 0,
chr14  95141727  95141736 DICER1|NM_030621.4|non-overlapping|ATG 0 -  95141727  95141727 0,0,0  1 9, 0,
chr14  95133474  95133483 DICER1|NM_030621.4|non-overlapping|ATG 0 -  95133474  95133474 0,0,0  1 9, 0,
chr14  95140662  95140704 DICER1|NM_030621.4|non-overlapping|ATG 0 -  95140662  95140662 0,0,0  1 42, 0,
chr14  95133500  95140712 DICER1|NM_030621.4|non-overlapping|ATG 0 -  95133500  95133500 0,0,0  2 3,54, 0,7158,
chr14  95140735  95140744 DICER1|NM_030621.4|non-overlapping|ATG 0 -  95140735  95140735 0,0,0  1 9, 0,
chr17   8383004   8383118 RPL26|NM_001315530.2|non-overlapping|ATC 0 -   8383004   8383004 0,0,0  1 114, 0,
chr17   8383004   8383031 RPL26|NM_001315530.2|non-overlapping|ATG 0 -   8383004   8383004 0,0,0  1 27, 0,
chr17   8383053   8383104 RPL26|NM_001315530.2|non-overlapping|ATG 0 -   8383053   8383053 0,0,0  1 51, 0,
chr17  15260708  15260738 PMP22|NM_001281455.2|overlapping|TTG 0 -  15260708  15260708 0,0,0  1 30, 0,
chr17  15259161  15260749 PMP22|NM_001281455.2|overlapping|CTG 0 -  15259161  15259161 0,0,0  2 32,100, 0,1488,
chr17  15260708  15262443 PMP22|NM_001281455.2|overlapping|CTG 0 -  15260708  15260708 0,0,0  2 53,19, 0,1716,
chr17  15260745  15262459 PMP22|NM_001281455.2|non-overlapping|CTG 0 -  15260745  15260745 0,0,0  2 16,35, 0,1679,
chr17  15262455  15262488 PMP22|NM_001281455.2|non-overlapping|ACG 0 -  15262455  15262455 0,0,0  1 33, 0,
chr20    527983    528004 CSNK2A1|NM_177559.3|non-overlapping|ATG 0 -    527983    527983 0,0,0  1 21, 0,
chr20    527951    528014 CSNK2A1|NM_177559.3|non-overlapping|ATG 0 -    527951    527951 0,0,0  1 63, 0,
chr17  49413285  49414286 PHB|NM_001281715.2|non-overlapping|ATG 0 -  49413285  49413285 0,0,0  2 6,45, 0,956,
chr17  49414260  49414317 PHB|NM_001281715.2|non-overlapping|ATG 0 -  49414260  49414260 0,0,0  1 57, 0,
chr17  49414768  49414828 PHB|NM_001281496.2|non-overlapping|ATG 0 -  49414768  49414768 0,0,0  1 60, 0,
chr17  49413285  49414877 PHB|NM_001281496.2|non-overlapping|ATG 0 -  49413285  49413285 0,0,0  2 6,138, 0,1454,
chr17  49414768  49414858 PHB|NM_001281496.2|non-overlapping|ATG 0 -  49414768  49414768 0,0,0  1 90, 0,
chr17  49414291  49414858 PHB|NM_001281715.2|non-overlapping|ATG 0 -  49414291  49414291 0,0,0  2 42,24, 0,543,
chr1 154157717 154183173 TPM3|NM_001278189.2|CDS_extension|ACG 0 - 154157717 154157717 0,0,0  9 4,79,70,63,76,71,118,134,186, 0,11587,12682,12931,14311,15190,15366,18397,25270,
chr10  80205437  80205512 ANXA11|NM_145868.2|non-overlapping|CTG 0 -  80205437  80205437 0,0,0  1 75, 0,
chr10  80170848  80205412 ANXA11|NM_145868.2|overlapping|ACG 0 -  80170848  80170848 0,0,0  4 67,63,49,70, 0,1958,5258,34494,
chr10  80170848  80176147 ANXA11|NM_145868.2|overlapping|CTG 0 -  80170848  80170848 0,0,0  3 67,63,41, 0,1958,5258,
chr10  80170848  80176126 ANXA11|NM_145868.2|overlapping|GTG 0 -  80170848  80170848 0,0,0  3 67,63,20, 0,1958,5258,
chr1  26788468  26788489 PIGV|NM_001202554.1|non-overlapping|ATG 0 +  26788468  26788468 0,0,0  1 21, 0,
chr2 210477711 210477717 CPS1|NM_001122633.3|non-overlapping|ATG 0 + 210477711 210477711 0,0,0  1 6, 0,
chr2 210477742 210477754 CPS1|NM_001122633.3|non-overlapping|ATG 0 + 210477742 210477742 0,0,0  1 12, 0,
chr4   1347843   1348159 UVSSA|NM_001317935.2|overlapping|ATG 0 +   1347843   1347843 0,0,0  2 44,70, 0,246,
chr6  31740017  31740128 MSH5|NM_002441.5|non-overlapping|GTG 0 +  31740017  31740017 0,0,0  1 111, 0,
chr6  31740090  31740120 MSH5|NM_002441.5|non-overlapping|ATG 0 +  31740090  31740090 0,0,0  1 30, 0,
chr7  33129561  33129768 BBS9|NM_198428.3|non-overlapping|ATG 0 +  33129561  33129561 0,0,0  1 207, 0,
chr1 108885276 108885297 GPSM2|NM_013296.5|non-overlapping|ATG 0 + 108885276 108885276 0,0,0  1 21, 0,
chr1 226871352 226871379 PSEN2|NM_000447.3|non-overlapping|ATG 0 + 226871352 226871352 0,0,0  1 27, 0,
chr1  27558733  27558883 AHDC1|NM_001029882.3|non-overlapping|ATG 0 -  27558733  27558733 0,0,0  1 150, 0,
chr10 110919116 110919128 BBIP1|NM_001195306.2|non-overlapping|ATG 0 - 110919116 110919116 0,0,0  1 12, 0,
chr10  77637644  77637725 KCNMA1|NM_002247.4|non-overlapping|ATG 0 -  77637644  77637644 0,0,0  1 81, 0,
chr11  45804475  45804685 SLC35C1|NM_018389.5|non-overlapping|ATG 0 +  45804475  45804475 0,0,0  1 210, 0,
chr13  80337646  80337748 SPRY2|NM_005842.4|overlapping|ATG 0 -  80337646  80337646 0,0,0  1 102, 0,
chr14 104795514 104795553 AKT1|NM_005163.2|non-overlapping|ATG 0 - 104795514 104795514 0,0,0  1 39, 0,
chr14  31026330  31026360 STRN3|NM_001083893.2|non-overlapping|ATG 0 -  31026330  31026330 0,0,0  1 30, 0,
chr14  69879511  69952144 SMOC1|NM_001034852.3|overlapping|ATG 0 +  69879511  69879511 0,0,0  2 266,7, 0,72626,
chr16  67571148  67571187 CTCF|NM_006565.4|non-overlapping|ATG 0 +  67571148  67571148 0,0,0  1 39, 0,
chr16  70800929  70801004 VAC14|NM_018052.5|non-overlapping|ATG 0 -  70800929  70800929 0,0,0  1 75, 0,
chr17  62065211  62065253 MED13|NM_005121.3|non-overlapping|ATG 0 -  62065211  62065211 0,0,0  1 42, 0,
chr19  18155599  18155623 PIK3R2|NM_005027.4|non-overlapping|ATG 0 +  18155599  18155599 0,0,0  1 24, 0,
chr19  38081398  38081497 SIPA1L3|NM_015073.3|non-overlapping|ATG 0 +  38081398  38081398 0,0,0  1 99, 0,
chr19  49876982  49877072 AKT1S1|NM_032375.5|non-overlapping|ATG 0 -  49876982  49876982 0,0,0  1 90, 0,
chr19  49877203  49877311 AKT1S1|NM_032375.5|non-overlapping|ATG 0 -  49877203  49877203 0,0,0  1 108, 0,
chr20  34369398  34369449 ITCH|NM_031483.7|non-overlapping|ATG 0 +  34369398  34369398 0,0,0  1 51, 0,
chr20    448023    462500 TBC1D20|NM_144628.4|overlapping|ATG 0 -    448023    448023 0,0,0  2 51,165, 0,14312,
chr20  50903959  50928818 ADNP|NM_015339.5|overlapping|ATG 0 -  50903959  50903959 0,0,0  2 42,168, 0,24691,
chr4   5711349   5719288 EVC|NM_153717.3|overlapping|ATG 0 +   5711349   5711349 0,0,0  2 205,41, 0,7898,
chr5 179801905 179806626 MGAT4B|NM_014275.5|overlapping|ATG 0 - 179801905 179801905 0,0,0  2 64,140, 0,4581,
chr7 101217411 101217579 PLOD3|NM_001084.5|non-overlapping|ATG 0 - 101217411 101217411 0,0,0  1 168, 0,
chr7 134646838 134658386 BPGM|NM_199186.3|non-overlapping|ATG 0 + 134646838 134646838 0,0,0  2 99,39, 0,11509,
chr8 118110960 118111215 EXT1|NM_000127.3|overlapping|ATG 0 - 118110960 118110960 0,0,0  1 255, 0,
chr1 116666531 116666588 IGSF3|NM_001542.4|non-overlapping|ATG 0 - 116666531 116666531 0,0,0  1 57, 0,
chr1 155240698 155241126 GBA|NM_001005741.3|overlapping|ATG 0 - 155240698 155240698 0,0,0  2 19,41, 0,387,
chr1 155521558 155521612 ASH1L|NM_018489.3|non-overlapping|ATG 0 - 155521558 155521558 0,0,0  1 54, 0,
chr1 156601410 156601467 GPATCH4|NM_182679.3|non-overlapping|ATG 0 - 156601410 156601410 0,0,0  1 57, 0,
chr1 161153779 161153809 UFC1|NM_016406.4|non-overlapping|ATG 0 + 161153779 161153779 0,0,0  1 30, 0,
chr1 161153833 161153857 UFC1|NM_016406.4|non-overlapping|ATG 0 + 161153833 161153833 0,0,0  1 24, 0,
chr1 161153930 161153945 UFC1|NM_016406.4|non-overlapping|ATG 0 + 161153930 161153930 0,0,0  1 15, 0,
chr1 161176504 161176549 B4GALT3|NM_001199873.1|non-overlapping|ATG 0 - 161176504 161176504 0,0,0  1 45, 0,
chr1 161177443 161177485 B4GALT3|NM_001199873.1|non-overlapping|ATG 0 - 161177443 161177443 0,0,0  1 42, 0,
chr1 196652093 196652105 CFH|NM_000186.4|non-overlapping|ATG 0 + 196652093 196652093 0,0,0  1 12, 0,
chr1 207752090 207752192 CD46|NM_002389.4|non-overlapping|ATG 0 + 207752090 207752090 0,0,0  1 102, 0,
chr1 214551186 214551192 PTPN14|NM_005401.5|non-overlapping|ATG 0 - 214551186 214551186 0,0,0  1 6, 0,
chr1 231421992 231422004 EGLN1|NM_022051.3|non-overlapping|ATG 0 - 231421992 231421992 0,0,0  1 12, 0,
chr1  27558867  27603548 AHDC1|NM_001029882.3|non-overlapping|ATG 0 -  27558867  27558867 0,0,0  2 16,152, 0,44529,
chr10 103917593 103917656 STN1|NM_024928.5|non-overlapping|ATG 0 - 103917593 103917593 0,0,0  1 63, 0,
chr10  74151202  74151292 ADK|NM_006721.4|overlapping|ATG 0 +  74151202  74151202 0,0,0  1 90, 0,
chr10  78033838  78033886 RPS24|NM_033022.4|non-overlapping|ATG 0 +  78033838  78033838 0,0,0  1 48, 0,
chr10  98443214  98445396 HPS1|NM_000195.5|overlapping|ATG 0 -  98443214  98443214 0,0,0  2 26,97, 0,2085,
chr11 108227600 108227621 ATM|NM_000051.4|non-overlapping|ATG 0 + 108227600 108227600 0,0,0  1 21, 0,
chr11 117316026 117316098 BACE1|NM_012104.4|non-overlapping|ATG 0 - 117316026 117316026 0,0,0  1 72, 0,
chr11 117316189 117316201 BACE1|NM_012104.4|non-overlapping|ATG 0 - 117316189 117316189 0,0,0  1 12, 0,
chr11  47214993  47215017 DDB2|NM_000107.3|non-overlapping|ATG 0 +  47214993  47214993 0,0,0  1 24, 0,
chr11  57762066  57762096 CTNND1|NM_001085458.2|non-overlapping|ATG 0 +  57762066  57762066 0,0,0  1 30, 0,
chr11  61364355  61366169 TMEM138|NM_016464.5|overlapping|ATG 0 +  61364355  61364355 0,0,0  2 163,125, 0,1689,
chr11   6655615   6655663 DCHS1|NM_003737.4|non-overlapping|ATG 0 -   6655615   6655615 0,0,0  1 48, 0,
chr11  68030653  68032164 NDUFS8|NM_002496.4|overlapping|ATG 0 +  68030653  68030653 0,0,0  2 80,13, 0,1498,
chr11    796092    796137 SLC25A22|NM_024698.6|non-overlapping|ATG 0 -    796092    796092 0,0,0  1 45, 0,
chr12 110281241 110281448 ATP2A2|NM_001681.4|non-overlapping|ATG 0 + 110281241 110281241 0,0,0  1 207, 0,
chr12  12662450  12695506 GPR19|NM_006143.3|non-overlapping|ATG 0 -  12662450  12662450 0,0,0  3 20,157,48, 0,21900,33008,
chr12  52949749  52949842 KRT8|NM_002273.4|non-overlapping|ATG 0 -  52949749  52949749 0,0,0  1 93, 0,
chr12  57755187  57755280 MARCHF9|NM_138396.6|non-overlapping|ATG 0 +  57755187  57755187 0,0,0  1 93, 0,
chr12   6493497   6493617 NCAPD2|NM_014865.4|non-overlapping|ATG 0 +   6493497   6493497 0,0,0  1 120, 0,
chr12   7060722   7060875 C1S|NM_201442.4|non-overlapping|ATG 0 +   7060722   7060722 0,0,0  1 153, 0,
chr12    753222    753300 WNK1|NM_018979.4|non-overlapping|ATG 0 +    753222    753222 0,0,0  1 78, 0,
chr13  36879735  36879777 SMAD9|NM_001127217.3|non-overlapping|ATG 0 -  36879735  36879735 0,0,0  1 42, 0,
chr13  40793161  40793179 SLC25A15|NM_014252.4|non-overlapping|ATG 0 +  40793161  40793161 0,0,0  1 18, 0,
chr14  31026359  31026377 STRN3|NM_001083893.2|non-overlapping|ATG 0 -  31026359  31026359 0,0,0  1 18, 0,
chr14  49621090  49621132 MGAT2|NM_002408.4|non-overlapping|ATG 0 +  49621090  49621090 0,0,0  1 42, 0,
chr14  73147865  73148072 PSEN1|NM_000021.4|overlapping|ATG 0 +  73147865  73147865 0,0,0  2 11,106, 0,101,
chr14  94388747  94388813 SERPINA1|NM_000295.5|non-overlapping|ATG 0 -  94388747  94388747 0,0,0  1 66, 0,
chr15  45587270  45587300 BLOC1S6|NM_012388.4|non-overlapping|ATG 0 +  45587270  45587270 0,0,0  1 30, 0,
chr15  92900815  92901169 CHD2|NM_001271.4|non-overlapping|ATG 0 +  92900815  92900815 0,0,0  2 9,3, 0,351,
chr15  96326090  96326192 NR2F2|NM_001145155.2|non-overlapping|ATG 0 +  96326090  96326090 0,0,0  1 102, 0,
chr16   3609375   3609543 SLX4|NM_032444.4|non-overlapping|ATG 0 -   3609375   3609375 0,0,0  1 168, 0,
chr16  57735794  57736988 KATNB1|NM_005886.3|non-overlapping|ATG 0 +  57735794  57735794 0,0,0  2 61,11, 0,1183,
chr16  89317045  89418292 ANKRD11|NM_013275.6|non-overlapping|ATG 0 -  89317045  89317045 0,0,0  2 33,9, 0,101238,
chr17   4739719   4739845 CXCL16|NM_022059.4|non-overlapping|ATG 0 -   4739719   4739719 0,0,0  1 126, 0,
chr17  58417122  58417215 RNF43|NM_017763.6|non-overlapping|ATG 0 -  58417122  58417122 0,0,0  1 93, 0,
chr17   7589976   7590009 SOX15|NM_006942.2|non-overlapping|ATG 0 -   7589976   7589976 0,0,0  1 33, 0,
chr17  77320094  77320148 SEPTIN9|NM_006640.5|non-overlapping|ATG 0 +  77320094  77320094 0,0,0  1 54, 0,
chr17  78997877  78997886 CANT1|NM_138793.4|non-overlapping|ATG 0 -  78997877  78997877 0,0,0  1 9, 0,
chr18  26226826  26226922 TAF4B|NM_005640.3|non-overlapping|ATG 0 +  26226826  26226826 0,0,0  1 96, 0,
chr18  75210828  75210849 TSHZ1|NM_005786.6|non-overlapping|ATG 0 +  75210828  75210828 0,0,0  1 21, 0,
chr19  10379647  10379767 TYK2|NM_003331.5|non-overlapping|ATG 0 -  10379647  10379647 0,0,0  1 120, 0,
chr19  10379759  10380386 TYK2|NM_003331.5|non-overlapping|ATG 0 -  10379759  10379759 0,0,0  2 20,7, 0,620,
chr19   1205900   1206530 STK11|NM_000455.5|non-overlapping|ATG 0 +   1205900   1205900 0,0,0  1 630, 0,
chr19  18155816  18155849 PIK3R2|NM_005027.4|non-overlapping|ATG 0 +  18155816  18155816 0,0,0  1 33, 0,
chr19  38029088  38029103 SIPA1L3|NM_015073.3|non-overlapping|ATG 0 +  38029088  38029088 0,0,0  1 15, 0,
chr19  38081256  38081328 SIPA1L3|NM_015073.3|non-overlapping|ATG 0 +  38081256  38081256 0,0,0  1 72, 0,
chr19  42325917  42325989 MEGF8|NM_001410.3|non-overlapping|ATG 0 +  42325917  42325917 0,0,0  1 72, 0,
chr19  43780881  43781151 KCNN4|NM_002250.3|non-overlapping|ATG 0 -  43780881  43780881 0,0,0  1 270, 0,
chr19  49877134  49877185 AKT1S1|NM_032375.5|non-overlapping|ATG 0 -  49877134  49877134 0,0,0  1 51, 0,
chr19  49877328  49877337 AKT1S1|NM_032375.5|non-overlapping|ATG 0 -  49877328  49877328 0,0,0  1 9, 0,
chr2 208271514 208271619 PIKFYVE|NM_015040.4|overlapping|ATG 0 + 208271514 208271514 0,0,0  1 105, 0,
chr2 218658797 218659398 ZNF142|NM_001105537.4|non-overlapping|ATG 0 - 218658797 218658797 0,0,0  3 79,56,30, 0,182,571,
chr20  10420545  10420737 MKKS|NM_018848.3|non-overlapping|ATG 0 -  10420545  10420545 0,0,0  1 192, 0,
chr20  18507613  18507643 SEC23B|NM_006363.6|non-overlapping|ATG 0 +  18507613  18507613 0,0,0  1 30, 0,
chr20    408240    408705 RBCK1|NM_031229.4|non-overlapping|ATG 0 +    408240    408240 0,0,0  1 465, 0,
chr20  50928745  50928781 ADNP|NM_015339.5|non-overlapping|ATG 0 -  50928745  50928745 0,0,0  1 36, 0,
chr20   5119692   5126538 PCNA|NM_002592.2|overlapping|ATG 0 -   5119692   5119692 0,0,0  2 222,39, 0,6807,
chr20  63659282  63659357 RTEL1|NM_001283009.2|non-overlapping|ATG 0 +  63659282  63659282 0,0,0  1 75, 0,
chr21  14968326  14968332 NRIP1|NM_003489.4|non-overlapping|ATG 0 -  14968326  14968326 0,0,0  1 6, 0,
chr22  26481762  26481792 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26481762  26481762 0,0,0  1 30, 0,
chr22  26481911  26481983 HPS4|NM_022081.6|non-overlapping|ATG 0 -  26481911  26481911 0,0,0  1 72, 0,
chr22  29603841  29603943 NF2|NM_000268.4|non-overlapping|ATG 0 +  29603841  29603841 0,0,0  1 102, 0,
chr22  49913704  49913842 ALG12|NM_024105.4|overlapping|ATG 0 -  49913704  49913704 0,0,0  1 138, 0,
chr3 121834460 121834970 IQCB1|NM_001023570.4|non-overlapping|ATG 0 - 121834460 121834460 0,0,0  2 19,5, 0,505,
chr3 130894762 130930441 ATP2C1|NM_014382.5|overlapping|ATG 0 + 130894762 130894762 0,0,0  2 13,26, 0,35653,
chr3 134485746 134485842 CEP63|NM_025180.5|non-overlapping|ATG 0 + 134485746 134485746 0,0,0  1 96, 0,
chr3 155079675 155079747 MME|NM_007289.4|non-overlapping|ATG 0 + 155079675 155079675 0,0,0  1 72, 0,
chr3 177064989 177098468 TBL1XR1|NM_024665.7|non-overlapping|ATG 0 - 177064989 177064989 0,0,0  2 33,3, 0,33476,
chr3 183643531 183650341 KLHL24|NM_017644.3|non-overlapping|ATG 0 + 183643531 183643531 0,0,0  2 11,46, 0,6764,
chr3 184315779 184315800 EIF4G1|NM_198241.3|overlapping|ATG 0 + 184315779 184315779 0,0,0  1 21, 0,
chr3  39383449  39383491 SLC25A38|NM_017875.4|non-overlapping|ATG 0 +  39383449  39383449 0,0,0  1 42, 0,
chr3  69011984  69012594 EOGT|NM_001278689.2|non-overlapping|ATG 0 -  69011984  69011984 0,0,0  2 7,80, 0,530,
chr4 112818124 112904458 ANK2|NM_001354243.1|non-overlapping|ATG 0 + 112818124 112818124 0,0,0  2 140,4, 0,86330,
chr4 169612100 169612142 NEK1|NM_012224.4|non-overlapping|ATG 0 - 169612100 169612100 0,0,0  1 42, 0,
chr4   2812351   2820628 SH3BP2|NM_001145855.2|overlapping|ATG 0 +   2812351   2812351 0,0,0  2 126,15, 0,8262,
chr4  54064449  54064503 CHIC2|NM_012110.4|non-overlapping|ATG 0 -  54064449  54064449 0,0,0  1 54, 0,
chr5 132369789 132369795 SLC22A5|NM_003060.4|non-overlapping|ATG 0 + 132369789 132369789 0,0,0  1 6, 0,
chr5 139482554 139482659 STING1|NM_198282.4|non-overlapping|ATG 0 - 139482554 139482554 0,0,0  1 105, 0,
chr5  14769084  14871478 ANKH|NM_054027.6|overlapping|ATG 0 -  14769084  14769084 0,0,0  2 107,127, 0,102267,
chr5  68226655  68226679 PIK3R1|NM_181523.3|overlapping|ATG 0 +  68226655  68226655 0,0,0  1 24, 0,
chr5  93583782  93583860 NR2F1|NM_005654.6|non-overlapping|ATG 0 +  93583782  93583782 0,0,0  1 78, 0,
chr6 142783547 142836971 HIVEP2|NM_006734.4|non-overlapping|ATG 0 - 142783547 142783547 0,0,0  2 68,37, 0,53387,
chr6 149369928 149369955 TAB2|NM_015093.6|non-overlapping|ATG 0 + 149369928 149369928 0,0,0  1 27, 0,
chr6  16328341  16328431 ATXN1|NM_000332.3|non-overlapping|ATG 0 -  16328341  16328341 0,0,0  1 90, 0,
chr6  57222226  57222280 RAB23|NM_183227.3|non-overlapping|ATG 0 -  57222226  57222226 0,0,0  1 54, 0,
chr6  98926881  98934770 FBXL4|NM_001278716.1|overlapping|ATG 0 -  98926881  98926881 0,0,0  3 179,118,9, 0,823,7880,
chr7 139716954 139777648 HIPK2|NM_022740.5|overlapping|ATG 0 - 139716954 139716954 0,0,0  2 61,44, 0,60650,
chr7 139777694 139777712 HIPK2|NM_022740.5|non-overlapping|ATG 0 - 139777694 139777694 0,0,0  1 18, 0,
chr7  93117884  93117983 SAMD9|NM_017654.4|non-overlapping|ATG 0 -  93117884  93117884 0,0,0  1 99, 0,
chr8 103414753 103414939 DCAF13|NM_015420.7|non-overlapping|ATG 0 + 103414753 103414753 0,0,0  1 186, 0,
chr8 144326785 144326878 DGAT1|NM_012079.6|non-overlapping|ATG 0 - 144326785 144326785 0,0,0  1 93, 0,
chr8  42271370  42272088 IKBKB|NM_001556.3|non-overlapping|ATG 0 +  42271370  42271370 0,0,0  2 99,6, 0,712,
chr9 115118001 115118229 TNC|NM_002160.4|non-overlapping|ATG 0 - 115118001 115118001 0,0,0  1 228, 0,
chr9 128886027 128886105 LRRC8A|NM_019594.4|non-overlapping|ATG 0 + 128886027 128886027 0,0,0  1 78, 0,
chr9 132353690 132353753 SETX|NM_015046.7|non-overlapping|ATG 0 - 132353690 132353690 0,0,0  1 63, 0,
chr9 132928944 132935090 TSC1|NM_000368.5|non-overlapping|ATG 0 - 132928944 132928944 0,0,0  2 8,58, 0,6088,
chr9 133417788 133418010 REXO4|NM_001279350.2|non-overlapping|ATG 0 - 133417788 133417788 0,0,0  1 222, 0,
chr9 137086973 137087060 MAN1B1|NM_016219.5|overlapping|ATG 0 + 137086973 137086973 0,0,0  1 87, 0,
chr9  34372953  34376796 MYORG|NM_020702.5|non-overlapping|ATG 0 -  34372953  34372953 0,0,0  2 53,4, 0,3839,
chr9   4985467   4985473 JAK2|NM_004972.4|non-overlapping|ATG 0 +   4985467   4985467 0,0,0  1 6, 0,
chr9   4985966   4985972 JAK2|NM_004972.4|non-overlapping|ATG 0 +   4985966   4985966 0,0,0  1 6, 0,
chrX  10158460  10158490 CLCN4|NM_001830.4|non-overlapping|ATG 0 +  10158460  10158460 0,0,0  1 30, 0,
chrX 107826089 107826137 MID2|NM_012216.4|non-overlapping|ATG 0 + 107826089 107826089 0,0,0  1 48, 0,
chrX 108439395 108439401 COL4A6|NM_001847.4|non-overlapping|ATG 0 - 108439395 108439395 0,0,0  1 6, 0,
chrX 153794646 153794673 SSR4|NM_006280.2|non-overlapping|ATG 0 + 153794646 153794646 0,0,0  1 27, 0,
chrX  68829561  68829591 EFNB1|NM_004429.5|non-overlapping|ATG 0 +  68829561  68829561 0,0,0  1 30, 0,
chrX  68829672  68829684 EFNB1|NM_004429.5|non-overlapping|ATG 0 +  68829672  68829672 0,0,0  1 12, 0,
chr1   6490485   6490572 PLEKHG5|NM_001265594.1|non-overlapping|CTG 0 -   6490485   6490485 0,0,0  1 87, 0,
chr12 114683917 114683926 TBX3|NM_005996.4|non-overlapping|TTG 0 - 114683917 114683917 0,0,0  1 9, 0,
chr12  14885787  14885817 MGP|NM_000900.5|overlapping|CTG 0 -  14885787  14885787 0,0,0  1 30, 0,
chr12  25250799  25250886 KRAS|NM_004985.5|non-overlapping|GTG 0 -  25250799  25250799 0,0,0  1 87, 0,
chr14  20454660  20454729 OSGEP|NM_017807.4|overlapping|CTG 0 -  20454660  20454660 0,0,0  1 69, 0,
chr14  94388683  94388692 SERPINA1|NM_000295.5|non-overlapping|CTG 0 -  94388683  94388683 0,0,0  1 9, 0,
chr15  25438625  25438709 UBE3A|NM_130838.4|non-overlapping|GTG 0 -  25438625  25438625 0,0,0  1 84, 0,
chr15  25438741  25438747 UBE3A|NM_130838.4|non-overlapping|CTG 0 -  25438741  25438741 0,0,0  1 6, 0,
chr15  65185164  65185203 CLPX|NM_006660.5|non-overlapping|GTG 0 -  65185164  65185164 0,0,0  1 39, 0,
chr17  44220735  44220849 UBTF|NM_014233.4|non-overlapping|TTG 0 -  44220735  44220735 0,0,0  1 114, 0,
chr17  81512069  81512771 ACTG1|NM_001614.5|overlapping|CTG 0 -  81512069  81512069 0,0,0  3 73,129,38, 0,162,664,
chr17   8383195   8383201 RPL26|NM_001315530.2|non-overlapping|GTG 0 -   8383195   8383195 0,0,0  1 6, 0,
chr19  29715140  29715218 C19orf12|NM_001031726.3|non-overlapping|CTG 0 -  29715140  29715140 0,0,0  1 78, 0,
chr19   3600669   3606613 TBXA2R|NM_001060.6|non-overlapping|CTG 0 -   3600669   3600669 0,0,0  2 48,84, 0,5860,
chr19  41353223  41353235 TGFB1|NM_000660.7|non-overlapping|GTG 0 -  41353223  41353223 0,0,0  1 12, 0,
chr19  46846141  46850789 AP2S1|NM_004069.6|overlapping|CTG 0 -  46846141  46846141 0,0,0  2 1,26, 0,4622,
chr19   4818478   4818514 TICAM1|NM_182919.4|non-overlapping|CTG 0 -   4818478   4818478 0,0,0  1 36, 0,
chr1 173824887 173824983 DARS2|NM_018122.5|non-overlapping|CTG 0 + 173824887 173824887 0,0,0  1 96, 0,
chr1  63370930  63370996 ALG6|NM_013339.4|overlapping|CTG 0 +  63370930  63370930 0,0,0  1 66, 0,
chr10  72005767  72005782 CHST3|NM_004273.5|non-overlapping|CTG 0 +  72005767  72005767 0,0,0  1 15, 0,
chr10  88990662  88990767 FAS|NM_000043.6|non-overlapping|GTG 0 +  88990662  88990662 0,0,0  1 105, 0,
chr12   6944060   6944078 C12orf57|NM_138425.4|non-overlapping|GTG 0 +   6944060   6944060 0,0,0  1 18, 0,
chr15  38252940  38253045 SPRED1|NM_152594.3|non-overlapping|CTG 0 +  38252940  38252940 0,0,0  1 105, 0,
chrX  48898002  48898023 PQBP1|NM_005710.2|non-overlapping|GTG 0 +  48898002  48898002 0,0,0  1 21, 0,
chrX  78104327  78104354 PGK1|NM_000291.4|overlapping|CTG 0 +  78104327  78104327 0,0,0  1 27, 0,
chr17  37087315  37359045 ACACA|NM_198836.3|CDS_extension|ACG 0 -  37087315  37087315 0,0,0 56 124,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,47, 0,1622,9680,10514,24215,25772,34039,35215,38382,42049,42759,62548,63985,68367,74465,91944,93885,100961,103804,104774,106058,112823,113111,118449,119467,120341,123151,134408,136196,137676,139023,147659,153160,154637,156055,157272,157764,159510,160695,161277,164689,165570,170387,170896,172044,176369,183435,186877,188635,189717,190580,195951,197522,242857,252488,271683,
chr11  76860914  76860977 ACER3|NM_018367.6|non-overlapping|CTG 0 +  76860914  76860914 0,0,0  1 63, 0,
chrX 109696191 109733154 ACSL4|NM_004458.3|non-overlapping|GTG 0 - 109696191 109696191 0,0,0  2 5,16, 0,36947,
chr14 104724270 104724780 ADSSL1|NM_199165.2|non-overlapping|ATG 0 + 104724270 104724270 0,0,0  1 510, 0,
chr11  78127418  78139628 ALG8|NM_024079.5|overlapping|ATG 0 -  78127418  78127418 0,0,0  2 18,135, 0,12075,
chr11  10456197  10456311 AMPD3|NM_001025390.2|non-overlapping|ATT 0 +  10456197  10456197 0,0,0  1 114, 0,
chr11  10456245  10456311 AMPD3|NM_001025390.2|non-overlapping|ATG 0 +  10456245  10456245 0,0,0  1 66, 0,
chr4 112818100 112904458 ANK2|NM_001354243.1|non-overlapping|ATG 0 + 112818100 112818100 0,0,0  2 164,4, 0,86354,
chr4 112904473 112904497 ANK2|NM_001354243.1|overlapping|ATG 0 + 112904473 112904473 0,0,0  1 24, 0,
chr16  89317030  89317045 ANKRD11|NM_013275.6|non-overlapping|ATG 0 -  89317030  89317030 0,0,0  1 15, 0,
chr16  89317041  89317065 ANKRD11|NM_013275.6|non-overlapping|ATG 0 -  89317041  89317041 0,0,0  1 24, 0,
chr16  89490277  89490478 ANKRD11|NM_013275.6|non-overlapping|ATC 0 -  89490277  89490277 0,0,0  1 201, 0,
chr16  89490470  89490536 ANKRD11|NM_013275.6|non-overlapping|ATG 0 -  89490470  89490470 0,0,0  1 66, 0,
chr10  72215776  72215863 ASCC1|NM_001369089.1|non-overlapping|ATG 0 -  72215776  72215776 0,0,0  1 87, 0,
chrX 139932075 139932102 ATP11C|NM_001353811.2|non-overlapping|ACG 0 - 139932075 139932075 0,0,0  1 27, 0,
chrX 139932229 139932322 ATP11C|NM_001353811.2|non-overlapping|GTG 0 - 139932229 139932229 0,0,0  1 93, 0,
chrX 139932574 139932733 ATP11C|NM_001353811.2|non-overlapping|CTG 0 - 139932574 139932574 0,0,0  1 159, 0,
chrX 139932875 139932902 ATP11C|NM_001353811.2|non-overlapping|ATG 0 - 139932875 139932875 0,0,0  1 27, 0,
chrX 139932585 139932951 ATP11C|NM_001353811.2|non-overlapping|GTG 0 - 139932585 139932585 0,0,0  1 366, 0,
chrX 139932951 139933020 ATP11C|NM_001353811.2|non-overlapping|GTG 0 - 139932951 139932951 0,0,0  1 69, 0,
chr12 110281532 110281862 ATP2A2|NM_001681.4|overlapping|CTG 0 + 110281532 110281532 0,0,0  1 330, 0,
chr11  65181955  65185986 CAPN1|NM_005186.3|overlapping|CTG 0 +  65181955  65181955 0,0,0  5 58,268,70,119,70, 0,745,1172,1518,3961,
chr11  65181982  65185986 CAPN1|NM_005186.3|overlapping|CTG 0 +  65181982  65181982 0,0,0  5 31,268,70,119,70, 0,718,1145,1491,3934,
chr5 123422952 123423051 CEP120|NM_001375407.1|overlapping|CTG 0 - 123422952 123422952 0,0,0  1 99, 0,
chr5 123346748 123423190 CEP120|NM_001375407.1|CDS_extension|CTG 0 - 123346748 123346748 0,0,0 20 61,146,99,123,162,93,90,153,97,183,150,175,217,228,198,149,142,115,157,241, 0,3195,17747,25901,30625,31587,35362,35988,36237,38202,39769,41683,43175,44361,46551,52387,65650,69261,71610,76201,
chr5 123418460 123423230 CEP120|NM_001375407.1|overlapping|GTG 0 - 123418460 123418460 0,0,0  2 55,281, 0,4489,
chr5 123423198 123423246 CEP120|NM_001375407.1|non-overlapping|CTG 0 - 123423198 123423198 0,0,0  1 48, 0,
chr5 123418460 123423296 CEP120|NM_001375407.1|overlapping|ACG 0 - 123418460 123418460 0,0,0  2 55,347, 0,4489,
chr10  93496793  93496829 CEP55|NM_018131.4|non-overlapping|ATC 0 +  93496793  93496793 0,0,0  1 36, 0,
chr10  93496825  93500079 CEP55|NM_018131.4|overlapping|CTG 0 +  93496825  93496825 0,0,0  2 98,40, 0,3214,
chr10  93496844  93500083 CEP55|NM_018131.4|overlapping|CTG 0 +  93496844  93496844 0,0,0  2 79,44, 0,3195,
chr10  93496891  93500079 CEP55|NM_018131.4|overlapping|TTG 0 +  93496891  93496891 0,0,0  2 32,40, 0,3148,
chrX  49922670  49923461 CLCN5|NM_001127899.3|non-overlapping|ATG 0 +  49922670  49922670 0,0,0  2 122,55, 0,736,
chrX  49922715  49923461 CLCN5|NM_001127899.3|non-overlapping|CTG 0 +  49922715  49922715 0,0,0  2 77,55, 0,691,
chrX  49925250  50092219 CLCN5|NM_001127899.3|CDS_extension|CTG 0 +  49925250  49925250 0,0,0 13 64,147,152,100,188,123,207,81,543,187,399,217,91, 0,117065,144628,147238,150544,155343,156390,160729,161077,163447,164865,165419,166878,
chr11  72434452  72434533 CLPB|NM_030813.6|overlapping|ATG 0 -  72434452  72434452 0,0,0  1 81, 0,
chr17   3636757   3636769 CTNS|NM_004937.3|non-overlapping|GTG 0 +   3636757   3636757 0,0,0  1 12, 0,
chrX  70455218  70455239 DLG3|NM_001166278.2|non-overlapping|CTG 0 +  70455218  70455218 0,0,0  1 21, 0,
chrX  70455241  70502269 DLG3|NM_001166278.2|CDS_extension|CTG 0 +  70455241  70455241 0,0,0 12 22,115,177,76,100,42,51,102,173,110,92,107, 0,23908,36865,37279,38134,41938,43278,43934,44635,45229,45656,46921,
chr12  32679298  32679376 DNM1L|NM_012062.5|overlapping|CTG 0 +  32679298  32679298 0,0,0  1 78, 0,
chr1 111139595 111139634 DRAM2|NM_001349881.1|non-overlapping|GTG 0 - 111139595 111139595 0,0,0  1 39, 0,
chr6  98934775  98934805 FBXL4|NM_001278716.1|non-overlapping|CTG 0 -  98934775  98934775 0,0,0  1 30, 0,
chr6  98934775  98934844 FBXL4|NM_001278716.1|non-overlapping|ATT 0 -  98934775  98934775 0,0,0  1 69, 0,
chr14  65412915  65413044 FUT8|XM_017021136.1|non-overlapping|ATG 0 +  65412915  65412915 0,0,0  1 129, 0,
chr14  65413099  65413153 FUT8|XM_017021136.1|non-overlapping|ATC 0 +  65413099  65413099 0,0,0  1 54, 0,
chr1 182388705 182391207 GLUL|NM_001033056.4|overlapping|ATG 0 - 182388705 182388705 0,0,0  2 45,33, 0,2469,
chr1 182391176 182391320 GLUL|NM_001033056.4|non-overlapping|ATG 0 - 182391176 182391176 0,0,0  1 144, 0,
chr11 125887717 125900268 HYLS1|NM_001134793.2|CDS_extension|CTG 0 + 125887717 125887717 0,0,0  3 48,50,925, 0,3705,11626,
chr9  92293515  92293563 IARS|NM_013417.3|non-overlapping|ACG 0 -  92293515  92293515 0,0,0  1 48, 0,
chr21  33241872  33241911 IFNAR2|NM_001289125.1|non-overlapping|ATG 0 +  33241872  33241872 0,0,0  1 39, 0,
chr14  58427786  58428056 KIAA0586|NM_014749.5|non-overlapping|ATG 0 +  58427786  58427786 0,0,0  1 270, 0,
chr11  94492871  94493711 MRE11|NM_005590.3|non-overlapping|GTG 0 -  94492871  94492871 0,0,0  2 35,28, 0,812,
chr11  94492871  94493777 MRE11|NM_005590.3|non-overlapping|GTG 0 -  94492871  94492871 0,0,0  2 35,94, 0,812,
chr15  96326014  96326032 NR2F2|NM_001145155.2|non-overlapping|ATG 0 +  96326014  96326014 0,0,0  1 18, 0,
chr11  66954354  66954417 PC|NM_001040716.1|non-overlapping|GTG 0 -  66954354  66954354 0,0,0  1 63, 0,
chr22  18078270  18078348 PEX26|NM_001127649.2|non-overlapping|ATG 0 +  18078270  18078270 0,0,0  1 78, 0,
chr1   6490485   6490518 PLEKHG5|NM_001265594.1|non-overlapping|ATG 0 -   6490485   6490485 0,0,0  1 33, 0,
chr11  64744061  64744112 RASGRP2|NM_001098671.2|non-overlapping|ATG 0 -  64744061  64744061 0,0,0  1 51, 0,
chr11  64742108  64744770 RASGRP2|NM_001098670.2|overlapping|GTG 0 -  64742108  64742108 0,0,0  3 4,144,29, 0,685,2633,
chr18  22933909  22933969 RBBP8|NM_203291.2|non-overlapping|ATG 0 +  22933909  22933909 0,0,0  1 60, 0,
chr19  19192940  19193033 RFXANK|NM_001278728.2|non-overlapping|TTG 0 +  19192940  19192940 0,0,0  1 93, 0,
chr19  19192947  19192977 RFXANK|NM_001278728.2|non-overlapping|CTG 0 +  19192947  19192947 0,0,0  1 30, 0,
chr16  57186557  57186890 RSPRY1|NM_001305163.2|non-overlapping|CTG 0 +  57186557  57186557 0,0,0  1 333, 0,
chr16  57186681  57186789 RSPRY1|NM_001305163.2|non-overlapping|CTG 0 +  57186681  57186681 0,0,0  1 108, 0,
chr16  57186828  57186840 RSPRY1|NM_001305163.2|non-overlapping|ATG 0 +  57186828  57186828 0,0,0  1 12, 0,
chr9 133732573 133738269 SARDH|NM_001134707.2|overlapping|CTG 0 - 133732573 133732573 0,0,0  3 28,361,16, 0,1269,5680,
chr9 133734187 133738303 SARDH|NM_001134707.2|non-overlapping|CTG 0 - 133734187 133734187 0,0,0  2 16,50, 0,4066,
chr4  71187369  71567893 SLC4A4|NM_001134742.2|CDS_extension|CTG 0 +  71187369  71187369 0,0,0 25 32,74,180,136,161,180,77,158,88,155,114,175,134,272,71,192,114,162,179,73,69,174,162,80,106, 0,49206,67850,152000,162542,169638,210207,253246,260276,263019,263818,266125,279074,285329,299578,310131,344692,346857,358980,360278,367770,370342,372723,379634,380418,
chr8 144358832 144358904 SLC52A2|XM_006716658.2|non-overlapping|CTG 0 + 144358832 144358832 0,0,0  1 72, 0,
chr8 144358868 144358904 SLC52A2|XM_006716658.2|non-overlapping|GTG 0 + 144358868 144358868 0,0,0  1 36, 0,
chr8 144358876 144359255 SLC52A2|XM_006716658.2|non-overlapping|CTG 0 + 144358876 144358876 0,0,0  2 189,72, 0,307,
chr8 144358937 144359187 SLC52A2|XM_006716658.2|non-overlapping|GTG 0 + 144358937 144358937 0,0,0  2 128,4, 0,246,
chr1  47312952  47312970 STIL|NM_001282936.1|non-overlapping|ATG 0 -  47312952  47312952 0,0,0  1 18, 0,
chr21  32630994  32727862 SYNJ1|NM_001160306.2|CDS_extension|CTG 0 -  32630994  32630994 0,0,0 28 807,218,109,71,144,210,163,79,216,118,157,159,193,141,85,192,166,153,82,170,97,62,84,226,268,87,146,26, 0,7913,8676,10901,14651,15398,19189,22293,25692,26008,26721,33918,34948,35438,39293,42345,47650,50501,53043,54753,55983,57311,63233,64062,68843,70966,95777,96842,
chr6  13326894  13328358 TBC1D7|NM_016495.6|overlapping|ACG 0 -  13326894  13326894 0,0,0  2 12,63, 0,1401,
chr19   3600669   3606544 TBXA2R|NM_001060.6|non-overlapping|ATG 0 -   3600669   3600669 0,0,0  2 48,15, 0,5860,
chr19   3600658   3600670 TBXA2R|NM_001060.6|non-overlapping|ATG 0 -   3600658   3600658 0,0,0  1 12, 0,
chr9  69121299  69151686 TJP2|NM_001170414.2|non-overlapping|CTG 0 +  69121299  69121299 0,0,0  2 66,36, 0,30351,
chr17  78126863  78128709 TMC6|NM_001127198.2|non-overlapping|TTG 0 -  78126863  78126863 0,0,0  2 43,98, 0,1748,
chr20  46689314  46689446 TP53RK|NM_033550.4|overlapping|CTG 0 -  46689314  46689314 0,0,0  1 132, 0,
chr5 115163682 115169657 TRIM36|NM_001300759.1|overlapping|ATG 0 - 115163682 115163682 0,0,0  2 70,50, 0,5925,
chr5 115169759 115169777 TRIM36|NM_001300759.1|non-overlapping|CTG 0 - 115169759 115169759 0,0,0  1 18, 0,
chr5 115169759 115169822 TRIM36|NM_001300759.1|non-overlapping|CTG 0 - 115169759 115169759 0,0,0  1 63, 0,
chr2 165949713 165953778 TTC21B|NM_024753.5|overlapping|CTG 0 - 165949713 165949713 0,0,0  2 11,94, 0,3971,
chr8  33513021  33513054 TTI2|NM_025115.5|non-overlapping|ATG 0 -  33513021  33513021 0,0,0  1 33, 0,
chr11   8081360   8081438 TUB|NM_177972.3|non-overlapping|CTG 0 +   8081360   8081360 0,0,0  1 78, 0,
chr1 155680435 155680444 YY1AP1|NM_139119.2|non-overlapping|ATG 0 - 155680435 155680435 0,0,0  1 9, 0,
chr1 155680440 155688102 YY1AP1|NM_139119.2|non-overlapping|CTG 0 - 155680440 155680440 0,0,0  2 16,32, 0,7630,
chr1 155680435 155688689 YY1AP1|NM_139119.2|non-overlapping|GTG 0 - 155680435 155680435 0,0,0  3 21,131,31, 0,7635,8223,
chr1 155688925 155688976 YY1AP1|NM_139119.2|non-overlapping|ATG 0 - 155688925 155688925 0,0,0  1 51, 0,
chr5 115180152 115180218 TRIM36|NM_018700.4|non-overlapping|ATG 0 - 115180152 115180152 0,0,0  1 66, 0,
chr11  10455070  10455109 AMPD3|NM_001025389.1|non-overlapping|ATG 0 +  10455070  10455070 0,0,0  1 39, 0,
chr17  37330391  37339838 ACACA|NM_198836.3|overlapping|GTG 0 -  37330391  37330391 0,0,0  2 34,35, 0,9412,
chr11  76860939  76926572 ACER3|NM_018367.6|overlapping|GTG 0 +  76860939  76860939 0,0,0  2 140,16, 0,65617,
chr10  72102368  72213325 ASCC1|NM_001369089.1|CDS_extension|ATT 0 -  72102368  72102368 0,0,0 10 44,118,86,125,120,137,179,98,100,139, 0,481,25713,30688,50500,59169,94442,101058,108363,110818,
chr11  65182713  65211286 CAPN1|NM_005186.3|CDS_truncation|ATC 0 +  65182713  65182713 0,0,0 21 255,70,119,134,169,84,86,75,161,176,12,212,40,66,58,65,69,79,117,59,27, 0,414,760,3203,3456,4501,5241,5700,5872,21969,22996,23749,24066,25341,25491,26609,27135,27304,27622,28100,28546,
chr10  93496688  93496829 CEP55|NM_018131.4|non-overlapping|CTG 0 +  93496688  93496688 0,0,0  1 141, 0,
chr10  93496715  93496829 CEP55|NM_018131.4|non-overlapping|GTG 0 +  93496715  93496715 0,0,0  1 114, 0,
chr1 111137545 111137566 DRAM2|NM_001349881.1|non-overlapping|ATG 0 - 111137545 111137545 0,0,0  1 21, 0,
chr1 111139633 111140097 DRAM2|NM_001349881.1|non-overlapping|CTG 0 - 111139633 111139633 0,0,0  2 78,60, 0,404,
chr6  98927017  98927041 FBXL4|NM_001278716.1|non-overlapping|ATG 0 -  98927017  98927017 0,0,0  1 24, 0,
chr6  98927718  98927754 FBXL4|NM_001278716.1|non-overlapping|ATG 0 -  98927718  98927718 0,0,0  1 36, 0,
chr6  98926881  98927780 FBXL4|NM_001278716.1|overlapping|ATG 0 -  98926881  98926881 0,0,0  2 179,76, 0,823,
chr6  98926881  98927807 FBXL4|NM_001278716.1|overlapping|ATG 0 -  98926881  98926881 0,0,0  2 179,103, 0,823,
chr6  98927787  98927814 FBXL4|NM_001278716.1|non-overlapping|ATG 0 -  98927787  98927787 0,0,0  1 27, 0,
chr6  98934807  98947847 FBXL4|NM_001278716.1|non-overlapping|CTG 0 -  98934807  98934807 0,0,0  2 72,42, 0,12998,
chr6  98947840  98947858 FBXL4|NM_001278716.1|non-overlapping|CTG 0 -  98947840  98947840 0,0,0  1 18, 0,
chr6  98934807  98947910 FBXL4|NM_001278716.1|non-overlapping|GTG 0 -  98934807  98934807 0,0,0  2 72,105, 0,12998,
chr6  98874277  98926952 FBXL4|NM_001278716.1|CDS_truncation|ATG 0 -  98874277  98874277 0,0,0  7 164,313,72,214,245,346,476, 0,1137,6275,24990,31148,43096,52199,
chr14  65455647  65455683 FUT8|XM_017021136.1|non-overlapping|ATG 0 +  65455647  65455647 0,0,0  1 36, 0,
chr14  65455656  65455683 FUT8|XM_017021136.1|non-overlapping|ATG 0 +  65455656  65455656 0,0,0  1 27, 0,
chr14  65561450  65561459 FUT8|XM_017021136.1|non-overlapping|ATG 0 +  65561450  65561450 0,0,0  1 9, 0,
chr14  65561507  65561525 FUT8|XM_017021136.1|non-overlapping|ATG 0 +  65561507  65561507 0,0,0  1 18, 0,
chr9  92293654  92293669 IARS|NM_013417.3|non-overlapping|ATG 0 -  92293654  92293654 0,0,0  1 15, 0,
chr21  33229985  33230006 IFNAR2|NM_001289125.1|non-overlapping|ACG 0 +  33229985  33229985 0,0,0  1 21, 0,
chr21  33230067  33230181 IFNAR2|NM_001289125.1|non-overlapping|ACG 0 +  33230067  33230067 0,0,0  1 114, 0,
chr21  33230128  33241844 IFNAR2|NM_001289125.1|non-overlapping|CTG 0 +  33230128  33230128 0,0,0  2 88,5, 0,11711,
chr21  33230164  33241844 IFNAR2|NM_001289125.1|non-overlapping|CTG 0 +  33230164  33230164 0,0,0  2 52,5, 0,11675,
chr21  33230182  33241844 IFNAR2|NM_001289125.1|non-overlapping|ATC 0 +  33230182  33230182 0,0,0  2 34,5, 0,11657,
chr8  81685956  81686268 IMPA1|NM_001144878.1|non-overlapping|ACG 0 -  81685956  81685956 0,0,0  2 7,17, 0,295,
chr8  81681552  81686303 IMPA1|NM_001144878.1|overlapping|ACG 0 -  81681552  81681552 0,0,0  3 32,201,52, 0,4210,4699,
chr14  58427628  58427685 KIAA0586|NM_014749.5|non-overlapping|ATG 0 +  58427628  58427628 0,0,0  1 57, 0,
chr11  94492809  94493865 MRE11|NM_005590.3|non-overlapping|ATG 0 -  94492809  94492809 0,0,0  2 97,182, 0,874,
chr11  66952431  66952446 PC|NM_001040716.1|non-overlapping|CTG 0 -  66952431  66952431 0,0,0  1 15, 0,
chr11  66954354  66958338 PC|NM_001040716.1|non-overlapping|CTG 0 -  66954354  66954354 0,0,0  2 82,17, 0,3967,
chr22  18077932  18077965 PEX26|NM_001127649.2|non-overlapping|ATG 0 +  18077932  18077932 0,0,0  1 33, 0,
chr22  18078019  18078121 PEX26|NM_001127649.2|non-overlapping|ATG 0 +  18078019  18078019 0,0,0  1 102, 0,
chr22  18078040  18078121 PEX26|NM_001127649.2|non-overlapping|AGG 0 +  18078040  18078040 0,0,0  1 81, 0,
chr11  64727301  64742896 RASGRP2|NM_001098671.2|CDS_extension|CTG 0 -  64727301  64727301 0,0,0 15 59,180,37,142,116,123,78,282,117,174,151,132,63,103,103, 0,1561,2460,2751,7810,8240,8601,9451,12058,12334,12711,13646,14137,14708,15492,
chr11  64742061  64742919 RASGRP2|NM_001098671.2|overlapping|GTG 0 -  64742061  64742061 0,0,0  2 51,126, 0,732,
chr19  19192969  19193053 RFXANK|NM_001278728.2|non-overlapping|ATC 0 +  19192969  19192969 0,0,0  1 84, 0,
chr19  19192973  19193033 RFXANK|NM_001278728.2|non-overlapping|CTG 0 +  19192973  19192973 0,0,0  1 60, 0,
chr19  19193000  19193033 RFXANK|NM_001278728.2|non-overlapping|CTG 0 +  19193000  19193000 0,0,0  1 33, 0,
chr19  19193011  19193053 RFXANK|NM_001278728.2|non-overlapping|ATT 0 +  19193011  19193011 0,0,0  1 42, 0,
chr19  19193058  19194097 RFXANK|NM_001278728.2|overlapping|CTG 0 +  19193058  19193058 0,0,0  2 42,159, 0,880,
chr16  57186339  57186483 RSPRY1|NM_001305163.2|non-overlapping|ATG 0 +  57186339  57186339 0,0,0  1 144, 0,
chr16  57186385  57186637 RSPRY1|NM_001305163.2|non-overlapping|CTG 0 +  57186385  57186385 0,0,0  1 252, 0,
chr16  57204515  57204539 RSPRY1|NM_001305163.2|non-overlapping|ATG 0 +  57204515  57204515 0,0,0  1 24, 0,
chr16  57204541  57204658 RSPRY1|NM_001305163.2|non-overlapping|ATG 0 +  57204541  57204541 0,0,0  1 117, 0,
chr16  57204544  57204658 RSPRY1|NM_001305163.2|non-overlapping|TTG 0 +  57204544  57204544 0,0,0  1 114, 0,
chr16  57204598  57204658 RSPRY1|NM_001305163.2|non-overlapping|ATG 0 +  57204598  57204598 0,0,0  1 60, 0,
chr8 144358622 144358781 SLC52A2|XM_006716658.2|non-overlapping|GTG 0 + 144358622 144358622 0,0,0  1 159, 0,
chr8 144358658 144358781 SLC52A2|XM_006716658.2|non-overlapping|GTG 0 + 144358658 144358658 0,0,0  1 123, 0,
chr8 144358692 144358872 SLC52A2|XM_006716658.2|non-overlapping|GTG 0 + 144358692 144358692 0,0,0  1 180, 0,
chr8 144358709 144358781 SLC52A2|XM_006716658.2|non-overlapping|CTG 0 + 144358709 144358709 0,0,0  1 72, 0,
chr8 144358725 144358872 SLC52A2|XM_006716658.2|non-overlapping|CTG 0 + 144358725 144358725 0,0,0  1 147, 0,
chr8 144358757 144358781 SLC52A2|XM_006716658.2|non-overlapping|ACG 0 + 144358757 144358757 0,0,0  1 24, 0,
chr8 144358777 144358843 SLC52A2|XM_006716658.2|non-overlapping|CTG 0 + 144358777 144358777 0,0,0  1 66, 0,
chr8 144359245 144359293 SLC52A2|XM_006716658.2|non-overlapping|CTG 0 + 144359245 144359245 0,0,0  1 48, 0,
chr1  47313111  47314068 STIL|NM_001282936.1|non-overlapping|CTG 0 -  47313111  47313111 0,0,0  2 45,33, 0,924,
chr1  47313043  47314102 STIL|NM_001282936.1|non-overlapping|GTG 0 -  47313043  47313043 0,0,0  2 113,67, 0,992,
chr6  13328297  13328501 TBC1D7|NM_016495.6|non-overlapping|CTG 0 -  13328297  13328297 0,0,0  1 204, 0,
chr6  13326890  13326905 TBC1D7|NM_016495.6|overlapping|ATG 0 -  13326890  13326890 0,0,0  1 15, 0,
chr2 165949713 165953754 TTC21B|NM_024753.5|overlapping|CTG 0 - 165949713 165949713 0,0,0  2 11,70, 0,3971,
chr8  33512471  33512651 TTI2|NM_025115.5|overlapping|CTG 0 -  33512471  33512471 0,0,0  1 180, 0,
chr8  33512602  33512680 TTI2|NM_025115.5|overlapping|ACG 0 -  33512602  33512602 0,0,0  1 78, 0,
chr8  33512471  33512699 TTI2|NM_025115.5|overlapping|ATC 0 -  33512471  33512471 0,0,0  1 228, 0,
chr8  33513123  33513132 TTI2|NM_025115.5|non-overlapping|ATG 0 -  33513123  33513123 0,0,0  1 9, 0,
chr11   8038873   8039032 TUB|NM_177972.3|non-overlapping|ATG 0 +   8038873   8038873 0,0,0  1 159, 0,
chrX 154092264 154097665 MECP2|NM_004992.4|non-overlapping|ATG 0 - 154092264 154092264 0,0,0  2 43,62, 0,5339,
chr15  24955048  24968037 SNRPN|NM_003097.6|non-overlapping|ATG 0 +  24955048  24955048 0,0,0  3 14,96,106, 0,7065,12883,
chr2 219571458 219571491 OBSL1|NM_015311.3|non-overlapping|CTG 0 - 219571458 219571458 0,0,0  1 33, 0,
chr15  24955009  24955030 SNRPN|NM_003097.6|non-overlapping|ATG 0 +  24955009  24955009 0,0,0  1 21, 0,
chr10    135556    180005 ZMYND11|NM_001202464.3|non-overlapping|ATG 0 +    135556    135556 0,0,0  2 3,12, 0,44437,
chr18  26549239  26549371 KCTD1|NM_001136205.2|non-overlapping|ATG 0 -  26549239  26549239 0,0,0  1 132, 0,
chr18  26549371  26549383 KCTD1|NM_001136205.2|non-overlapping|ATG 0 -  26549371  26549371 0,0,0  1 12, 0,
chr2 177234258 177263440 NFE2L2|NM_001145412.3|overlapping|ATG 0 - 177234258 177234258 0,0,0  2 13,38, 0,29144,
chr2 201260564 201260606 CASP8|NM_033356.4|non-overlapping|ATG 0 + 201260564 201260564 0,0,0  1 42, 0,
chr2 218659719 218660058 BCS1L|NM_001371450.1|non-overlapping|ACG 0 + 218659719 218659719 0,0,0  1 339, 0,
chr2 218660052 218660058 BCS1L|NM_001371450.1|non-overlapping|ATG 0 + 218660052 218660052 0,0,0  1 6, 0,
chr2 218660080 218660182 BCS1L|NM_001371450.1|non-overlapping|ATG 0 + 218660080 218660080 0,0,0  1 102, 0,
chr2 218660105 218660222 BCS1L|NM_001371450.1|non-overlapping|ATG 0 + 218660105 218660105 0,0,0  1 117, 0,
chr2 218659776 218660058 BCS1L|NM_001371450.1|non-overlapping|ATG 0 + 218659776 218659776 0,0,0  1 282, 0,
chr20   5950704   5950719 MCM8|NM_182802.3|non-overlapping|CTG 0 +   5950704   5950704 0,0,0  1 15, 0,
chr20   5950734   5950779 MCM8|NM_182802.3|non-overlapping|CTG 0 +   5950734   5950734 0,0,0  1 45, 0,
chr20   5950754   5950796 MCM8|NM_182802.3|non-overlapping|CTG 0 +   5950754   5950754 0,0,0  1 42, 0,
chr20   5950801   5950846 MCM8|NM_182802.3|non-overlapping|ATG 0 +   5950801   5950801 0,0,0  1 45, 0,
chr20   5951045   5951051 MCM8|NM_182802.3|non-overlapping|ATG 0 +   5951045   5951045 0,0,0  1 6, 0,
chr4   1241334   1241433 CTBP1|NM_001012614.2|non-overlapping|ATG 0 -   1241334   1241334 0,0,0  1 99, 0,
chr5 143403376 143403397 NR3C1|NM_001024094.2|non-overlapping|ATG 0 - 143403376 143403376 0,0,0  1 21, 0,
chr5 143403376 143403565 NR3C1|NM_001024094.2|non-overlapping|ACG 0 - 143403376 143403376 0,0,0  1 189, 0,
chr5 143403376 143403574 NR3C1|NM_001024094.2|non-overlapping|GTG 0 - 143403376 143403376 0,0,0  1 198, 0,
chr9  95249259  95317156 FANCC|NM_001243743.2|overlapping|ATG 0 -  95249259  95249259 0,0,0  2 110,28, 0,67869,
chr1  11680984  11681095 MAD2L2|ENST00000456915.2|non-overlapping|GTG 0 -  11680984  11680984 0,0,0  1 111, 0,
chr1  11680802  11681108 MAD2L2|ENST00000456915.2|non-overlapping|ATC 0 -  11680802  11680802 0,0,0  1 306, 0,
chr1  11680802  11680943 MAD2L2|ENST00000456915.2|non-overlapping|ATG 0 -  11680802  11680802 0,0,0  1 141, 0,
chr20  35658976  35659006 RBM12|NM_001198838.2|non-overlapping|TTG 0 -  35658976  35658976 0,0,0  1 30, 0,
chr20  35655233  35658980 RBM12|NM_001198838.2|overlapping|TTG 0 -  35655233  35655233 0,0,0  2 111,51, 0,3696,
chr2 120735871 120735949 GLI2|NM_001371271.1|non-overlapping|ATG 0 + 120735871 120735871 0,0,0  1 78, 0,
chr2 120735945 120736092 GLI2|NM_001371271.1|non-overlapping|ATG 0 + 120735945 120735945 0,0,0  1 147, 0,