From 1b0ebfda04ce81920c0ecf4714a8eb219aa7fd4f Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 29 Jun 2023 00:40:43 +0200 Subject: [PATCH] Add CLO processing --- notebooks/Process CLO Mappings.ipynb | 1087 ++ notebooks/clo.sssom.tsv | 10926 ++++++++++++++++++++ src/biomappings/resources/__init__.py | 19 +- src/biomappings/resources/mappings.tsv | 22 + src/biomappings/resources/predictions.tsv | 762 ++ src/biomappings/templates/home.html | 4 +- 6 files changed, 12813 insertions(+), 7 deletions(-) create mode 100644 notebooks/Process CLO Mappings.ipynb create mode 100644 notebooks/clo.sssom.tsv diff --git a/notebooks/Process CLO Mappings.ipynb b/notebooks/Process CLO Mappings.ipynb new file mode 100644 index 00000000..a0bb717f --- /dev/null +++ b/notebooks/Process CLO Mappings.ipynb @@ -0,0 +1,1087 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "id": "506955b2", + "metadata": {}, + "source": [ + "# Processing CLO Mappings\n", + "\n", + "\n", + "The [Cell Line Ontology (CLO)](https://bioregistry.io/registry/clo) is a detailed resouce, however it does not follow standard OBO modeling pattern for cross-references that either uses `oboInOwl:hasDbXref` or a SKOS and pointing to a single CURIE encoded as a string. Instead, it uses `rdfs:seeAlso` with a combination of non-standard CURIEs that are either comma or semi-colon delimited.\n", + "\n", + "This notebook attempts to unpack and operationalize these cross-references." + ] + }, + { + "cell_type": "code", + "execution_count": 1, + "id": "676743ba", + "metadata": {}, + "outputs": [], + "source": [ + "from collections import Counter, defaultdict\n", + "\n", + "import bioontologies\n", + "import bioregistry\n", + "import click\n", + "import pandas as pd\n", + "import pyobo\n", + "from tqdm.auto import tqdm\n", + "\n", + "from biomappings import PredictionTuple\n", + "from biomappings.resources import PREDICTIONS_HEADER, append_prediction_tuples" + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "id": "3f16ace2", + "metadata": {}, + "outputs": [], + "source": [ + "graph = bioontologies.get_obograph_by_prefix(\"clo\", check=False).guess(\"clo\")" + ] + }, + { + "cell_type": "code", + "execution_count": 3, + "id": "fe2debdb", + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + "'2.1.178'" + ] + }, + "execution_count": 3, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "graph.version" + ] + }, + { + "cell_type": "code", + "execution_count": 4, + "id": "3c724323", + "metadata": {}, + "outputs": [ + { + "data": { + "application/vnd.jupyter.widget-view+json": { + "model_id": "09fc001c94044e6c9a59baae1426e39e", + "version_major": 2, + "version_minor": 0 + }, + "text/plain": [ + " 0%| | 0.00/44.4k [00:00\n", + "WARNING: [2023-06-29 00:35:00] pyobo.api.names - [cldb] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:00] pyobo.api.names - [chembl.cell] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:00] pyobo.api.names - [cosmic.cell] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:00] pyobo.api.names - [atcc] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:00] pyobo.api.names - [ecacc] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:00] pyobo.api.names - [dsmz] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:03] pyobo.api.names - [jcrb] unable to look up results with \n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "CLO:0001584 invalid: \u001b[33matcc:COSMICID:910697\u001b[0m from line:\n", + " ATCC: COSMIC ID:910697; ATCC CRL-7905,CRL-7905\n", + "CLO:0002336 unparsed: \u001b[31mCCL-120\u001b[0m from line:\n", + " CCL-120\n", + "CLO:0002406 invalid: \u001b[33mdsmz:ACC360\u001b[0m from line:\n", + " DSMZ: ACC 360,COSMIC ID:910568; DSMZ ACC 360\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "WARNING: [2023-06-29 00:35:06] pyobo.api.names - [hms.lincs.cell] unable to look up results with \n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "CLO:0002557 invalid: \u001b[33mcldb:Cl847\u001b[0m from line:\n", + " HyperCLDB: Cl847\n", + "CLO:0002593 unparsed: \u001b[31m92031916\u001b[0m from line:\n", + " ECACC: 92031916,92031916; COSMIC ID:910555\n", + "CLO:0002899 invalid: \u001b[33mdsmz:ACC67\u001b[0m from line:\n", + " ACC 67\n", + "CLO:0002936 unparsed: \u001b[31m96100920\u001b[0m from line:\n", + " 96100920\n", + "CLO:0003506 invalid: \u001b[33matcc:CRL-2597-Discontinued\u001b[0m from line:\n", + " ATCC: CRL-2597 - Discontinued\n", + "CLO:0003591 invalid: \u001b[33matcc:CRL-8017A\u001b[0m from line:\n", + " ATCC: CRL-8017A\n", + "CLO:0003593 unparsed: \u001b[31m:90112119\u001b[0m from line:\n", + " : 90112119\n", + "CLO:0003627 invalid: \u001b[33mdsmz:ACC301\u001b[0m from line:\n", + " ACC 301\n", + "CLO:0003671 invalid: \u001b[33mdsmz:ACC17\u001b[0m from line:\n", + " ACC 17\n", + "CLO:0003672 invalid: \u001b[33mdsmz:ACC346\u001b[0m from line:\n", + " ACC 346\n", + "CLO:0003682 unparsed: \u001b[31mTIB-180\u001b[0m from line:\n", + " TIB-180\n", + "CLO:0003964 invalid: \u001b[33matcc:CRL-7025-Discontinued\u001b[0m from line:\n", + " ATCC: CRL-7025 - Discontinued\n", + "CLO:0004280 unparsed: \u001b[31mATCCHTB-63\u001b[0m from line:\n", + " ATCC: HTB-63,COSMIC ID:907067; ATCC HTB-63\n", + "CLO:0007112 invalid: \u001b[33mdsmz:ACC8\u001b[0m from line:\n", + " ACC 8\n", + "CLO:0007189 invalid: \u001b[33mdsmz:ACC197\u001b[0m from line:\n", + " ACC 197\n", + "CLO:0007201 invalid: \u001b[33mdsmz:ACC72\u001b[0m from line:\n", + " ACC 72\n", + "CLO:0007242 invalid: \u001b[33mdsmz:ACC673\u001b[0m from line:\n", + " DSMZ: COSMIC ID:1161992; DSMZ ACC 673,ACC 673\n", + "CLO:0007242 invalid: \u001b[33mdsmz:ACC673\u001b[0m from line:\n", + " DSMZ: COSMIC ID:1161992; DSMZ ACC 673,ACC 673\n", + "CLO:0007330 unparsed: \u001b[31mCCL-7.1\u001b[0m from line:\n", + " ATCC: CCL-7, CCL-7.1\n", + "CLO:0007599 unparsed: \u001b[31mHMSL:HMSL50583\u001b[0m from line:\n", + " CVCL: CVCL_0598; EFO: EFO_0001200; ChEMBL: CHEMBL3307364; HMSL: HMSL50583\n", + "CLO:0007600 unparsed: \u001b[31mCosmic\u001b[0m from line:\n", + " Cosmic; 1136377\n", + "CLO:0007600 unparsed: \u001b[31m1136377\u001b[0m from line:\n", + " Cosmic; 1136377\n", + "CLO:0007821 invalid: \u001b[33mdsmz:ACC437\u001b[0m from line:\n", + " ACC 437\n", + "CLO:0007938 invalid: \u001b[33mdsmz:ACC128\u001b[0m from line:\n", + " ACC 128\n", + "CLO:0007947 invalid: \u001b[33mdsmz:ACC207\u001b[0m from line:\n", + " ACC 207\n", + "CLO:0008416 invalid: \u001b[33mdsmz:ACC6\u001b[0m from line:\n", + " ACC 6\n", + "CLO:0008512 unparsed: \u001b[31m94060601\u001b[0m from line:\n", + " ECACC: 94060601,94060601; COSMIC ID:910546\n", + "CLO:0008870 unparsed: \u001b[31mCCL-113\u001b[0m from line:\n", + " CCL-113\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "WARNING: [2023-06-29 00:35:20] pyobo.api.names - [pubchem.bioassay] unable to look up results with \n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "CLO:0009038 unparsed: \u001b[31mATCCHTB-88\u001b[0m from line:\n", + " ATCC: HTB-88,COSMIC ID:909720; ATCC HTB-88\n", + "CLO:0009042 invalid: \u001b[33matcc:COSMICID:909725\u001b[0m from line:\n", + " ATCC: COSMIC ID:909725; ATCC HTB-71,HTB-71\n", + "CLO:0009042 unparsed: \u001b[31mATCCHTB-71\u001b[0m from line:\n", + " ATCC: COSMIC ID:909725; ATCC HTB-71,HTB-71\n", + "CLO:0009042 unparsed: \u001b[31mHTB-71\u001b[0m from line:\n", + " ATCC: COSMIC ID:909725; ATCC HTB-71,HTB-71\n", + "CLO:0009061 invalid: \u001b[33matcc:CRL-8033-1\u001b[0m from line:\n", + " ATCC: CRL-8033-1\n", + "CLO:0009062 invalid: \u001b[33matcc:CRL-8033-2\u001b[0m from line:\n", + " ATCC: CRL-8033-2\n", + "CLO:0009421 invalid: \u001b[33matcc:COSMICID:930299\u001b[0m from line:\n", + " ATCC: COSMIC ID:930299; ATCC CRL-1803,CRL-1803\n", + "CLO:0009456 invalid: \u001b[33mjcrb:IFO50288\u001b[0m from line:\n", + " JHSF: IFO50288\n", + "CLO:0009462 invalid: \u001b[33mdsmz:ACC4\u001b[0m from line:\n", + " ACC 4\n", + "CLO:0009833 unparsed: \u001b[31mDFCC-treon:\u001b[0m from line:\n", + " DFCC - treon:\n", + "CLO:0009845 invalid: \u001b[33mjcrb:JCRB0105.1\u001b[0m from line:\n", + " JHSF: JCRB0105.1\n", + "CLO:0009931 invalid: \u001b[33mjcrb:JCRB0232.1\u001b[0m from line:\n", + " JHSF: JCRB0232.1\n", + "CLO:0009947 invalid: \u001b[33mjcrb:JCRB0126.1\u001b[0m from line:\n", + " JHSF: JCRB0126.1\n", + "CLO:0009961 unparsed: \u001b[31m95090714\u001b[0m from line:\n", + " ECACC: 95090714; COSMIC ID:907292,95090714\n", + "CLO:0009973 unparsed: \u001b[31mBWH:621-101\u001b[0m from line:\n", + " BWH: 621-101,not available\n", + "CLO:0009973 unparsed: \u001b[31mnotavailable\u001b[0m from line:\n", + " BWH: 621-101,not available\n", + "CLO:0009998 invalid: \u001b[33mjcrb:JCRB1080.0\u001b[0m from line:\n", + " JHSF: JCRB1080.0\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "WARNING: [2023-06-29 00:35:32] pyobo.api.names - [iclc] unable to look up results with \n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "CLO:0037013 unparsed: \u001b[31mBroadInstitute:contactprovider\u001b[0m from line:\n", + " Broad Institute: contact provider\n", + "CLO:0037033 unparsed: \u001b[31mDFCI:n/a-1\u001b[0m from line:\n", + " DFCI: n/a-1\n", + "CLO:0037054 invalid: \u001b[33matcc:COSMICID:910401\u001b[0m from line:\n", + " ATCC: COSMIC ID:910401; ATCC CRL-1923,CRL-1923\n", + "CLO:0037072 unparsed: \u001b[31mATCCHTB-93\u001b[0m from line:\n", + " ATCC: HTB-93,COSMIC ID:909759; ATCC HTB-93\n", + "CLO:0037079 invalid: \u001b[33mjcrb:JCRB:COSMICID:907314\u001b[0m from line:\n", + " JCRB: COSMIC ID:907314; JCRB IFO50431,IFO50431\n", + "CLO:0037079 invalid: \u001b[33mjcrb:JCRBIFO50431\u001b[0m from line:\n", + " JCRB: COSMIC ID:907314; JCRB IFO50431,IFO50431\n", + "CLO:0037079 unparsed: \u001b[31mIFO50431\u001b[0m from line:\n", + " JCRB: COSMIC ID:907314; JCRB IFO50431,IFO50431\n", + "CLO:0037104 invalid: \u001b[33mjcrb:JCRB0234.0\u001b[0m from line:\n", + " JHSF: JCRB0234.0\n", + "CLO:0037105 invalid: \u001b[33mjcrb:JCRB0177.0\u001b[0m from line:\n", + " JHSF: JCRB0177.0\n", + "CLO:0037106 invalid: \u001b[33mjcrb:JCRB0177.1\u001b[0m from line:\n", + " JHSF: JCRB0177.1\n", + "CLO:0037108 invalid: \u001b[33mjcrb:JCRB0178.0\u001b[0m from line:\n", + " JHSF: JCRB0178.0\n", + "CLO:0037109 invalid: \u001b[33mjcrb:JCRB0178.1\u001b[0m from line:\n", + " JHSF: JCRB0178.1\n", + "CLO:0037112 unparsed: \u001b[31mMGH:MGH-1134\u001b[0m from line:\n", + " MGH: MGH-1134\n", + "CLO:0037131 unparsed: \u001b[31mRikenRCB1200\u001b[0m from line:\n", + " RIKEN: COSMIC ID:925339; Riken RCB1200,RCB1200\n", + "CLO:0037131 unparsed: \u001b[31mRCB1200\u001b[0m from line:\n", + " RIKEN: COSMIC ID:925339; Riken RCB1200,RCB1200\n", + "CLO:0037140 invalid: \u001b[33mjcrb:JCRB1075.0\u001b[0m from line:\n", + " JHSF: JCRB1075.0\n", + "CLO:0037141 invalid: \u001b[33mjcrb:JCRB1075.1\u001b[0m from line:\n", + " JHSF: JCRB1075.1\n", + "CLO:0037166 invalid: \u001b[33matcc:COSMICID:924247\u001b[0m from line:\n", + " ATCC: COSMIC ID:924247; ATCC HTB-117,HTB-117\n", + "CLO:0037166 unparsed: \u001b[31mATCCHTB-117\u001b[0m from line:\n", + " ATCC: COSMIC ID:924247; ATCC HTB-117,HTB-117\n", + "CLO:0037166 unparsed: \u001b[31mHTB-117\u001b[0m from line:\n", + " ATCC: COSMIC ID:924247; ATCC HTB-117,HTB-117\n", + "CLO:0037167 invalid: \u001b[33matcc:COSMICID:909758\u001b[0m from line:\n", + " ATCC: COSMIC ID:909758; ATCC HTB-118,HTB-118\n", + "CLO:0037167 unparsed: \u001b[31mATCCHTB-118\u001b[0m from line:\n", + " ATCC: COSMIC ID:909758; ATCC HTB-118,HTB-118\n", + "CLO:0037167 unparsed: \u001b[31mHTB-118\u001b[0m from line:\n", + " ATCC: COSMIC ID:909758; ATCC HTB-118,HTB-118\n", + "CLO:0037169 invalid: \u001b[33mbroad:\u001b[0m from line:\n", + " BROAD:\n", + "CLO:0037170 invalid: \u001b[33mjcrb:JCRB:JCRB0163\u001b[0m from line:\n", + " JCRB: JCRB0163\n", + "CLO:0037171 invalid: \u001b[33mjcrb:JCRB:JCRB0006\u001b[0m from line:\n", + " JCRB: JCRB0006\n", + "CLO:0037174 invalid: \u001b[33mjcrb:JCRB:JCRB0147\u001b[0m from line:\n", + " JCRB: JCRB0147\n", + "CLO:0037177 invalid: \u001b[33mjcrb:JCRB:JCRB0123\u001b[0m from line:\n", + " JCRB: JCRB0123\n", + "CLO:0037183 invalid: \u001b[33mjcrb:JCRB:JCRB0146\u001b[0m from line:\n", + " JCRB: JCRB0146\n", + "CLO:0037184 invalid: \u001b[33mcosmic:COSMICID:908149\u001b[0m from line:\n", + " COSMIC: COSMIC ID:908149\n", + "CLO:0037185 invalid: \u001b[33mjcrb:JCRB:JCRB0158.1\u001b[0m from line:\n", + " JCRB: JCRB0158.1\n", + "CLO:0037186 invalid: \u001b[33mjcrb:JCRB:JCRB0158.2\u001b[0m from line:\n", + " JCRB: JCRB0158.2\n", + "CLO:0037189 unparsed: \u001b[31mAsterandbio:\u001b[0m from line:\n", + " Asterandbio:\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "ERROR: [2023-06-29 00:35:54] pyobo.api.names - [bao v2.8.4] could not load\n", + "Traceback (most recent call last):\n", + " File \"/Users/cthoyt/dev/pyobo/src/pyobo/api/names.py\", line 132, in get_id_name_mapping\n", + " return _get_id_name_mapping()\n", + " File \"/Users/cthoyt/.virtualenvs/indra/lib/python3.10/site-packages/pystow/cache.py\", line 83, in _wrapped\n", + " rv = func()\n", + " File \"/Users/cthoyt/dev/pyobo/src/pyobo/api/names.py\", line 128, in _get_id_name_mapping\n", + " ontology = get_ontology(prefix, force=force, strict=strict, version=version)\n", + " File \"/Users/cthoyt/dev/pyobo/src/pyobo/identifier_utils.py\", line 115, in _wrapped\n", + " return f(norm_prefix, *args, **kwargs)\n", + " File \"/Users/cthoyt/dev/pyobo/src/pyobo/getters.py\", line 126, in get_ontology\n", + " robot.convert(path, _converted_obo_path, check=robot_check)\n", + " File \"/Users/cthoyt/dev/bioontologies/src/bioontologies/robot.py\", line 449, in convert\n", + " ret = check_output( # noqa:S603\n", + " File \"/usr/local/Cellar/python@3.10/3.10.11/Frameworks/Python.framework/Versions/3.10/lib/python3.10/subprocess.py\", line 421, in check_output\n", + " return run(*popenargs, stdout=PIPE, timeout=timeout, check=True,\n", + " File \"/usr/local/Cellar/python@3.10/3.10.11/Frameworks/Python.framework/Versions/3.10/lib/python3.10/subprocess.py\", line 526, in run\n", + " raise CalledProcessError(retcode, process.args,\n", + "subprocess.CalledProcessError: Command '['java', '-jar', '/Users/cthoyt/.data/robot/robot.jar', 'merge', '-i', '/Users/cthoyt/.data/pyobo/raw/bao/2.8.4/bao_complete.owl', 'convert', '-o', '/Users/cthoyt/.data/pyobo/raw/bao/2.8.4/bao_complete.obo']' returned non-zero exit status 1.\n", + "WARNING: [2023-06-29 00:35:54] pyobo.api.names - [bao] no results produced with \n", + "WARNING: [2023-06-29 00:35:54] pyobo.api.names - [thermofisher] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:54] pyobo.api.names - [biosample] unable to look up results with \n", + "WARNING: [2023-06-29 00:35:54] pyobo.api.names - [ebisc] unable to look up results with \n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "CLO:0037271 invalid: \u001b[33mbto:BAO_0030063\u001b[0m from line:\n", + " BTO: BAO_0030063\n", + "CLO:0050067 unparsed: \u001b[31m:MGH-889\u001b[0m from line:\n", + " : MGH-889\n", + "CLO:0050081 invalid: \u001b[33mdsmz:ACC6\u001b[0m from line:\n", + " ACC 6\n", + "CLO:0050117 unparsed: \u001b[31mRikenRCB0803\u001b[0m from line:\n", + " RIKEN: COSMIC ID:925342; Riken RCB0803,RCB0803\n", + "CLO:0050117 unparsed: \u001b[31mRCB0803\u001b[0m from line:\n", + " RIKEN: COSMIC ID:925342; Riken RCB0803,RCB0803\n", + "CLO:0050475 invalid: \u001b[33mjcrb:JCRB0158.0\u001b[0m from line:\n", + " JCRB0158.0\n", + "CLO:0050793 unparsed: \u001b[31mRikenRCB0555\u001b[0m from line:\n", + " RIKEN: COSMIC ID:906869; Riken RCB0555,RCB0555\n", + "CLO:0050793 unparsed: \u001b[31mRCB0555\u001b[0m from line:\n", + " RIKEN: COSMIC ID:906869; Riken RCB0555,RCB0555\n", + "CLO:0050796 unparsed: \u001b[31mRikenRCB0983\u001b[0m from line:\n", + " RIKEN: COSMIC ID:906848; Riken RCB0983,RCB0983\n", + "CLO:0050796 unparsed: \u001b[31mRCB0983\u001b[0m from line:\n", + " RIKEN: COSMIC ID:906848; Riken RCB0983,RCB0983\n", + "CLO:0050801 unparsed: \u001b[31mRIKEN:RCB1148\u001b[0m from line:\n", + " RIKEN: RCB1148,COSMIC ID:909770; Riken RCB1148\n", + "CLO:0050801 unparsed: \u001b[31mRikenRCB1148\u001b[0m from line:\n", + " RIKEN: RCB1148,COSMIC ID:909770; Riken RCB1148\n", + "CLO:0050970 invalid: \u001b[33mdsmz:ACC128\u001b[0m from line:\n", + " ACC 128\n", + "CLO:0051539 unparsed: \u001b[31mRikenRCB0478\u001b[0m from line:\n", + " RIKEN: COSMIC ID:910929; Riken RCB0478,RCB0478\n", + "CLO:0051539 unparsed: \u001b[31mRCB0478\u001b[0m from line:\n", + " RIKEN: COSMIC ID:910929; Riken RCB0478,RCB0478\n" + ] + } + ], + "source": [ + "counter = Counter()\n", + "xx1 = defaultdict(lambda: defaultdict(list))\n", + "xx2 = defaultdict(lambda: defaultdict(list))\n", + "\n", + "\n", + "def split(s):\n", + " return [\n", + " p2.replace(\" \", \"\").rstrip(\")\")\n", + " for p1 in s.strip().split(\";\")\n", + " for p2 in p1.strip().split(\",\")\n", + " ]\n", + "\n", + "\n", + "SKIP_PREFIXES = {\"omim\"}\n", + "Q_PREFIXES = {\"bao\", \"reo\", \"cellosaurus\"}\n", + "\n", + "# Accumulate CLO local unique identifiers to labels\n", + "names = {}\n", + "\n", + "fails = {}\n", + "rows = []\n", + "for node in tqdm(graph.nodes, unit_scale=True, unit=\"node\"):\n", + " if not node.id.startswith(\"http://purl.obolibrary.org/obo/CLO_\"):\n", + " continue\n", + " clo_id = node.id.removeprefix(\"http://purl.obolibrary.org/obo/CLO_\")\n", + " names[clo_id] = node.name\n", + " for p in node.properties or []:\n", + " if p.predicate_raw != \"http://www.w3.org/2000/01/rdf-schema#seeAlso\":\n", + " continue\n", + " for raw_curie in split(p.value_raw):\n", + " curie = raw_curie.removeprefix(\"rrid:\").removeprefix(\"RRID:\")\n", + " if curie.startswith(\"Sanger:COSMICID:\"):\n", + " prefix, identifier = \"cosmic.cell\", curie.removeprefix(\"Sanger:COSMICID:\")\n", + " elif curie.startswith(\"atcc:COSMICID:\"):\n", + " prefix, identifier = \"cosmic.cell\", curie.removeprefix(\"atcc:COSMICID:\")\n", + " elif curie.startswith(\"DSMZ:COSMICID:\"):\n", + " prefix, identifier = \"cosmic.cell\", curie.removeprefix(\"DSMZ:COSMICID:\")\n", + " elif curie.startswith(\"COSMIC: COSMIC ID:\"):\n", + " prefix, identifier = \"cosmic.cell\", curie.removeprefix(\"COSMIC: COSMIC ID:\")\n", + " elif curie.startswith(\"RIKEN:COSMICID:\"):\n", + " prefix, identifier = \"cosmic.cell\", curie.removeprefix(\"RIKEN:COSMICID:\")\n", + " elif curie.startswith(\"COSMICID:\"):\n", + " prefix, identifier = \"cosmic.cell\", curie.removeprefix(\"COSMICID:\")\n", + " elif curie.startswith(\"LINCS_HMS:\"):\n", + " prefix, identifier = \"hms.lincs.cell\", curie.removeprefix(\"LINCS_HMS:\")\n", + " elif curie.startswith(\"CHEMBL:\"):\n", + " prefix, identifier = \"chembl.cell\", curie.removeprefix(\"CHEMBL:\")\n", + " elif curie.startswith(\"ChEMBL:\"):\n", + " prefix, identifier = \"chembl.cell\", curie.removeprefix(\"ChEMBL:\")\n", + " elif curie.startswith(\"BTO_\"):\n", + " prefix, identifier = \"bto\", curie.removeprefix(\"BTO_\")\n", + " elif curie.startswith(\"CVCL_\"):\n", + " prefix, identifier = \"cellosaurus\", curie.removeprefix(\"CVCL_\")\n", + " elif curie.startswith(\"JHSF:\"):\n", + " prefix, identifier = \"jcrb\", curie.removeprefix(\"JHSF:\")\n", + " elif curie.startswith(\"CRL-\"):\n", + " prefix, identifier = \"atcc\", curie\n", + " elif curie.startswith(\"jcrb:JHSF:\"):\n", + " prefix, identifier = \"jcrb\", curie.removeprefix(\"jcrb:JHSF:\")\n", + " elif curie.startswith(\"JCRB\"):\n", + " prefix, identifier = \"jcrb\", curie\n", + " elif curie.startswith(\"JHSF:JCRB\"):\n", + " prefix, identifier = \"jcrb\", curie.removeprefix(\"JHSF:\")\n", + " elif curie.startswith(\"ATCCCRL\"):\n", + " prefix, identifier = \"atcc\", curie.removeprefix(\"ATCC\")\n", + " elif curie.startswith(\"bto:BAO_\"):\n", + " prefix, identifier = \"bao\", curie.removeprefix(\"bto:BAO_\")\n", + " elif curie.startswith(\"ACC\"):\n", + " prefix, identifier = \"dsmz\", curie\n", + " elif curie.startswith(\"DSMZACC\"):\n", + " prefix, identifier = \"dsmz\", curie.removeprefix(\"DSMZ\")\n", + " elif curie.startswith(\"dsmz:ACC\"):\n", + " prefix, identifier = \"dsmz\", \"ACC-\" + curie.removeprefix(\"dsmz:ACC\")\n", + " elif curie.startswith(\"DSMZ:ACC\"):\n", + " prefix, identifier = \"dsmz\", \"ACC-\" + curie.removeprefix(\"DSMZ:ACC\")\n", + " else:\n", + " prefix, identifier = bioregistry.parse_curie(curie)\n", + "\n", + " if prefix is None:\n", + " tqdm.write(\n", + " f\"CLO:{clo_id} unparsed: {click.style(curie, fg='red')} from line:\\n {p.value_raw}\"\n", + " )\n", + " continue\n", + " if prefix in SKIP_PREFIXES:\n", + " continue\n", + " if bioregistry.get_pattern(prefix) is None:\n", + " fails[prefix] = identifier\n", + " if not bioregistry.is_valid_identifier(prefix, identifier):\n", + " c = click.style(f\"{prefix}:{identifier}\", fg=\"yellow\")\n", + " tqdm.write(f\"CLO:{clo_id} invalid: {c} from line:\\n {p.value_raw}\")\n", + " continue\n", + "\n", + " rows.append(\n", + " (\n", + " bioregistry.curie_to_str(\"clo\", clo_id),\n", + " \"oboInOwl:hasDbXref\",\n", + " bioregistry.curie_to_str(prefix, identifier),\n", + " \"semapv:UnspecifiedMatching\",\n", + " node.name,\n", + " pyobo.get_name(prefix, identifier),\n", + " \"obo:clo\",\n", + " graph.version,\n", + " )\n", + " )\n", + "\n", + " counter[prefix, identifier] += 1\n", + " xx1[prefix][clo_id].append(identifier)\n", + " xx2[prefix][identifier].append(clo_id)\n", + "\n", + "\n", + "for p, i in sorted(fails.items()):\n", + " print(click.style(f\"missing pattern in {p}\", fg=\"red\"), \"example:\", i)\n", + "\n", + "mappings_df = pd.DataFrame(\n", + " rows,\n", + " columns=[\n", + " \"subject_id\",\n", + " \"predicate_id\",\n", + " \"object_id\",\n", + " \"mapping_justification\",\n", + " \"subject_label\",\n", + " \"object_label\",\n", + " \"mapping_set_id\",\n", + " \"mapping_set_version\",\n", + " ],\n", + ")\n", + "mappings_df.to_csv(\"clo.sssom.tsv\", sep=\"\\t\", index=False)" + ] + }, + { + "cell_type": "markdown", + "id": "d15e8d48", + "metadata": {}, + "source": [ + "# Summary of Cross-Referenced Resources" + ] + }, + { + "cell_type": "code", + "execution_count": 5, + "id": "8a5f503c", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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namedescription
prefix
atccAmerican Type Culture CollectionThe American Type Culture Collection (ATCC) is...
baoBioAssay OntologyThe BioAssay Ontology (BAO) describes chemical...
biosampleBioSampleThe BioSample Database stores information abou...
btoBRENDA Tissue OntologyThe Brenda tissue ontology is a structured con...
cellosaurusCellosaurusThe Cellosaurus is a knowledge resource on cel...
chembl.cellChEMBL database of bioactive drug-like small m...Chemistry resources
cldbCell Line DatabaseThe Cell Line Data Base (CLDB) is a reference ...
cosmic.cellCOSMIC Cell LinesCOSMIC, the Catalogue Of Somatic Mutations In ...
dsmzDeutsche Sammlung von Mikroorganismen und Zell...The Leibniz Institute DSMZ is the most diverse...
ebiscEuropean Bank for induced pluripotent Stem CellsCell line collections
ecaccEuropean Collection of Authenticated Cell CultureThe European Collection of Authenticated Cell ...
efoExperimental Factor OntologyThe Experimental Factor Ontology (EFO) provide...
hms.lincs.cellHMS LINCS CellDatabase contains all publicly available HMS L...
iclcInterlab Cell Line CollectionCell line collections
jcrbJRBC Cell BankCell line collections
meshMedical Subject HeadingsMeSH (Medical Subject Headings) is the Nationa...
obiOntology for Biomedical InvestigationsThe Ontology for Biomedical Investigations (OB...
pubchem.bioassayNCBI PubChem database of bioassay recordsPubChem provides information on the biological...
reoReagent OntologyThe Reagent Ontology (ReO) adheres to OBO Foun...
thermofisherThermo Fisher ScientificThermoFisher is a life sciences supply vendor.
\n", + "
" + ], + "text/plain": [ + " name \\\n", + "prefix \n", + "atcc American Type Culture Collection \n", + "bao BioAssay Ontology \n", + "biosample BioSample \n", + "bto BRENDA Tissue Ontology \n", + "cellosaurus Cellosaurus \n", + "chembl.cell ChEMBL database of bioactive drug-like small m... \n", + "cldb Cell Line Database \n", + "cosmic.cell COSMIC Cell Lines \n", + "dsmz Deutsche Sammlung von Mikroorganismen und Zell... \n", + "ebisc European Bank for induced pluripotent Stem Cells \n", + "ecacc European Collection of Authenticated Cell Culture \n", + "efo Experimental Factor Ontology \n", + "hms.lincs.cell HMS LINCS Cell \n", + "iclc Interlab Cell Line Collection \n", + "jcrb JRBC Cell Bank \n", + "mesh Medical Subject Headings \n", + "obi Ontology for Biomedical Investigations \n", + "pubchem.bioassay NCBI PubChem database of bioassay records \n", + "reo Reagent Ontology \n", + "thermofisher Thermo Fisher Scientific \n", + "\n", + " description \n", + "prefix \n", + "atcc The American Type Culture Collection (ATCC) is... \n", + "bao The BioAssay Ontology (BAO) describes chemical... \n", + "biosample The BioSample Database stores information abou... \n", + "bto The Brenda tissue ontology is a structured con... \n", + "cellosaurus The Cellosaurus is a knowledge resource on cel... \n", + "chembl.cell Chemistry resources \n", + "cldb The Cell Line Data Base (CLDB) is a reference ... \n", + "cosmic.cell COSMIC, the Catalogue Of Somatic Mutations In ... \n", + "dsmz The Leibniz Institute DSMZ is the most diverse... \n", + "ebisc Cell line collections \n", + "ecacc The European Collection of Authenticated Cell ... \n", + "efo The Experimental Factor Ontology (EFO) provide... \n", + "hms.lincs.cell Database contains all publicly available HMS L... \n", + "iclc Cell line collections \n", + "jcrb Cell line collections \n", + "mesh MeSH (Medical Subject Headings) is the Nationa... \n", + "obi The Ontology for Biomedical Investigations (OB... \n", + "pubchem.bioassay PubChem provides information on the biological... \n", + "reo The Reagent Ontology (ReO) adheres to OBO Foun... \n", + "thermofisher ThermoFisher is a life sciences supply vendor. " + ] + }, + "execution_count": 5, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "pd.DataFrame(\n", + " [\n", + " (p, bioregistry.get_name(p), bioregistry.get_description(p))\n", + " for p in sorted({prefix for prefix, _ in counter})\n", + " ],\n", + " columns=[\"prefix\", \"name\", \"description\"],\n", + ").set_index(\"prefix\")" + ] + }, + { + "cell_type": "code", + "execution_count": 6, + "id": "cd09647e", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "can not look up name for efo 0002082\n", + "can not look up name for efo 0002823\n", + "can not look up name for efo 0002080\n", + "can not look up name for efo 0002336\n", + "can not look up name for efo 0001256\n", + "can not look up name for efo 0002387\n" + ] + }, + { + "data": { + "text/html": [ + "
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source prefixsource identifiersource namerelationtarget prefixtarget identifiertarget nametypeconfidencesource
0clo0001230HEK293skos:exactMatchbto0000007HEK-293 cellsemapv:UnspecifiedMatching0.8clo
1clo0037238HEK293-T-REx cellskos:exactMatchbto0005238T-REx 293 cellsemapv:UnspecifiedMatching0.8clo
2clo00372422B4 cellskos:exactMatchbto00056822B4-T cellsemapv:UnspecifiedMatching0.8clo
3clo0037256HBL-1 cellskos:exactMatchbto0002522HBL-1 cellsemapv:UnspecifiedMatching0.8clo
4clo0037269S16 cellskos:exactMatchbto0002937S-16 cellsemapv:UnspecifiedMatching0.8clo
.................................
776clo0008392PC-12 cellskos:exactMatchmeshD016716PC12 Cellssemapv:UnspecifiedMatching0.8clo
777clo0009227Swiss-3T3 cellskos:exactMatchmeshD041701Swiss 3T3 Cellssemapv:UnspecifiedMatching0.8clo
778clo0009465U-937 cellskos:exactMatchmeshD020298U937 Cellssemapv:UnspecifiedMatching0.8clo
779clo0009524Vero cellskos:exactMatchmeshD014709Vero Cellssemapv:UnspecifiedMatching0.8clo
780clo0037201RMA cellskos:exactMatchobi1110038RMA cell linesemapv:UnspecifiedMatching0.8clo
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781 rows × 10 columns

\n", + "
" + ], + "text/plain": [ + " source prefix source identifier source name relation \\\n", + "0 clo 0001230 HEK293 skos:exactMatch \n", + "1 clo 0037238 HEK293-T-REx cell skos:exactMatch \n", + "2 clo 0037242 2B4 cell skos:exactMatch \n", + "3 clo 0037256 HBL-1 cell skos:exactMatch \n", + "4 clo 0037269 S16 cell skos:exactMatch \n", + ".. ... ... ... ... \n", + "776 clo 0008392 PC-12 cell skos:exactMatch \n", + "777 clo 0009227 Swiss-3T3 cell skos:exactMatch \n", + "778 clo 0009465 U-937 cell skos:exactMatch \n", + "779 clo 0009524 Vero cell skos:exactMatch \n", + "780 clo 0037201 RMA cell skos:exactMatch \n", + "\n", + " target prefix target identifier target name \\\n", + "0 bto 0000007 HEK-293 cell \n", + "1 bto 0005238 T-REx 293 cell \n", + "2 bto 0005682 2B4-T cell \n", + "3 bto 0002522 HBL-1 cell \n", + "4 bto 0002937 S-16 cell \n", + ".. ... ... ... \n", + "776 mesh D016716 PC12 Cells \n", + "777 mesh D041701 Swiss 3T3 Cells \n", + "778 mesh D020298 U937 Cells \n", + "779 mesh D014709 Vero Cells \n", + "780 obi 1110038 RMA cell line \n", + "\n", + " type confidence source \n", + "0 semapv:UnspecifiedMatching 0.8 clo \n", + "1 semapv:UnspecifiedMatching 0.8 clo \n", + "2 semapv:UnspecifiedMatching 0.8 clo \n", + "3 semapv:UnspecifiedMatching 0.8 clo \n", + "4 semapv:UnspecifiedMatching 0.8 clo \n", + ".. ... ... ... \n", + "776 semapv:UnspecifiedMatching 0.8 clo \n", + "777 semapv:UnspecifiedMatching 0.8 clo \n", + "778 semapv:UnspecifiedMatching 0.8 clo \n", + "779 semapv:UnspecifiedMatching 0.8 clo \n", + "780 semapv:UnspecifiedMatching 0.8 clo \n", + "\n", + "[781 rows x 10 columns]" + ] + }, + "execution_count": 6, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "DESIRED_PREFIXES = {\"bto\", \"efo\", \"mesh\", \"cellosaurus\", \"obi\"}\n", + "\n", + "\n", + "rows = []\n", + "for prefix in sorted(DESIRED_PREFIXES):\n", + " pyobo.get_id_name_mapping(prefix, strict=prefix != \"cellosaurus\")\n", + "\n", + " # later we can relax these constraints\n", + " external_skip = {\n", + " external_id for external_id, clo_ids in xx2[prefix].items() if len(clo_ids) > 1\n", + " }\n", + "\n", + " for clo_id, external_ids in xx1[prefix].items():\n", + " if len(external_ids) > 1:\n", + " continue\n", + " external_id = external_ids[0]\n", + " if external_id in external_skip:\n", + " continue\n", + "\n", + " clo_name = names[clo_id]\n", + " external_name = pyobo.get_name(prefix, external_id)\n", + " if not clo_name or not external_name:\n", + " print(\"can not look up name for\", prefix, external_id)\n", + " continue\n", + " rows.append(\n", + " PredictionTuple(\n", + " \"clo\",\n", + " clo_id,\n", + " clo_name,\n", + " \"skos:exactMatch\",\n", + " prefix,\n", + " external_id,\n", + " external_name,\n", + " \"semapv:UnspecifiedMatching\",\n", + " 0.8,\n", + " \"clo\",\n", + " )\n", + " )\n", + "\n", + "pd.DataFrame(rows, columns=PREDICTIONS_HEADER)" + ] + }, + { + "cell_type": "code", + "execution_count": 7, + "id": "d77b5def", + "metadata": {}, + "outputs": [ + { + "data": { + "application/vnd.jupyter.widget-view+json": { + "model_id": "9344a284eab54762bf2117d88a9426f9", + "version_major": 2, + "version_minor": 0 + }, + "text/plain": [ + "Removing curated from predicted: 0%| | 0.00/41.8k [00:00 None: """Append new lines to the predictions table that come as canonical tuples.""" append_predictions( (prediction_tuple.as_dict() for prediction_tuple in set(prediction_tuples)), deduplicate=deduplicate, sort=sort, + standardize=standardize, ) def append_predictions( - mappings: Iterable[Mapping[str, str]], deduplicate: bool = True, sort: bool = True + mappings: Iterable[Mapping[str, str]], + *, + deduplicate: bool = True, + sort: bool = True, + standardize: bool = False, ) -> None: """Append new lines to the predictions table.""" if deduplicate: @@ -306,8 +315,8 @@ def append_predictions( ) _write_helper(PREDICTIONS_HEADER, mappings, PREDICTIONS_PATH, "a") - if sort: - lint_predictions() + if sort or standardize: + lint_predictions(standardize=standardize) def lint_predictions(standardize: bool = False) -> None: diff --git a/src/biomappings/resources/mappings.tsv b/src/biomappings/resources/mappings.tsv index dba3db9a..c4f1ebd5 100644 --- a/src/biomappings/resources/mappings.tsv +++ b/src/biomappings/resources/mappings.tsv @@ -3011,6 +3011,28 @@ cl CL:0008002 skeletal muscle fiber skos:exactMatch mesh D018485 Muscle Fibers, cl CL:0010003 epithelial cell of alveolus of lung skos:exactMatch mesh D056809 Alveolar Epithelial Cells semapv:ManualMappingCuration orcid:0000-0001-9439-5346 cl CL:0010017 zygote skos:exactMatch mesh D015053 Zygote semapv:ManualMappingCuration orcid:0000-0001-9439-5346 cl CL:0010021 cardiac myoblast skos:exactMatch mesh D032386 Myoblasts, Cardiac semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +clo 0001230 HEK293 skos:exactMatch efo 0001182 HEK293 semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0001352 3T3-L1 cell skos:exactMatch mesh D041721 3T3-L1 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0001859 BALB/3T3 clone A31 cell skos:exactMatch mesh D041702 BALB 3T3 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0002172 Caco-2 cell skos:exactMatch mesh D018938 Caco-2 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0002421 CHO cell skos:exactMatch mesh D016466 CHO Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0003665 HCT 116 cell skos:exactMatch mesh D045325 HCT116 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0003684 HeLa cell skos:exactMatch mesh D006367 HeLa Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0003775 HL-60 cell skos:exactMatch mesh D018922 HL-60 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0004283 HT-29 cell skos:exactMatch mesh D019073 HT29 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0007043 JURKAT cell skos:exactMatch mesh D019169 Jurkat Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0007059 K-562 cell skos:exactMatch mesh D020014 K562 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0007074 KB cell skos:exactMatch mesh D007624 KB Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0007138 L Cells cell skos:exactMatch mesh D007739 L Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0007331 LLC-PK subscript(1) cell skos:exactMatch mesh D018374 LLC-PK1 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0008172 NIH-3T3 cell skos:exactMatch mesh D041681 NIH 3T3 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0008392 PC-12 cell skos:exactMatch mesh D016716 PC12 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0009227 Swiss-3T3 cell skos:exactMatch mesh D041701 Swiss 3T3 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0009465 U-937 cell skos:exactMatch mesh D020298 U937 Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0009524 Vero cell skos:exactMatch mesh D014709 Vero Cells semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0037219 HeLa-MAGI-CCR5 skos:exactMatch cellosaurus CVCL_D260 HeLa-MAGI-CCR5 semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0037256 HBL-1 cell skos:exactMatch bto BTO:0002522 HBL-1 cell semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 +clo 0037342 EDi008-B skos:exactMatch cellosaurus CVCL_LE56 EDi008-B semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:UnspecifiedMatching clo 0.8 doid DOID:0040002 aspirin allergy skos:exactMatch umls C0004058 Allergy to aspirin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 doid DOID:0040004 amoxicillin allergy skos:exactMatch umls C0571417 Allergy to amoxicillin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 doid DOID:0040005 ceftriaxone allergy skos:exactMatch umls C0571463 Allergy to ceftriaxone semapv:ManualMappingCuration orcid:0000-0003-4423-4370 diff --git a/src/biomappings/resources/predictions.tsv b/src/biomappings/resources/predictions.tsv index bc2a79e0..858c582f 100644 --- a/src/biomappings/resources/predictions.tsv +++ b/src/biomappings/resources/predictions.tsv @@ -9457,6 +9457,768 @@ chebi CHEBI:9910 Usambarensine skos:exactMatch mesh C070902 usambarensine semapv chebi CHEBI:9925 sodium valproate skos:exactMatch mesh C420746 Epilim semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:9954 Verbenalin skos:exactMatch mesh C000511 cornin iridoid semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:9955 (R)-(+)-verbenone skos:exactMatch mesh C052875 verbenone semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py +clo 0001008 697 cell skos:exactMatch cellosaurus CVCL_0079 697 semapv:UnspecifiedMatching 0.8 clo +clo 0001088 143B cell skos:exactMatch cellosaurus CVCL_2270 143B semapv:UnspecifiedMatching 0.8 clo +clo 0001230 HEK293 skos:exactMatch bto BTO:0000007 HEK-293 cell semapv:UnspecifiedMatching 0.8 clo +clo 0001234 293/CHE-Fc cell skos:exactMatch cellosaurus CVCL_6352 293/CHE-Fc semapv:UnspecifiedMatching 0.8 clo +clo 0001421 5637 cell skos:exactMatch cellosaurus CVCL_0126 5637 semapv:UnspecifiedMatching 0.8 clo +clo 0001421 5637 cell skos:exactMatch efo 0002096 5637 semapv:UnspecifiedMatching 0.8 clo +clo 0001448 639-V cell skos:exactMatch cellosaurus CVCL_1048 639V semapv:UnspecifiedMatching 0.8 clo +clo 0001448 639-V cell skos:exactMatch efo 0002097 639V semapv:UnspecifiedMatching 0.8 clo +clo 0001450 647-V cell skos:exactMatch cellosaurus CVCL_1049 647V semapv:UnspecifiedMatching 0.8 clo +clo 0001450 647-V cell skos:exactMatch efo 0002098 647V semapv:UnspecifiedMatching 0.8 clo +clo 0001485 769-P cell skos:exactMatch cellosaurus CVCL_1050 769-P semapv:UnspecifiedMatching 0.8 clo +clo 0001485 769-P cell skos:exactMatch efo 0002099 769P semapv:UnspecifiedMatching 0.8 clo +clo 0001510 8305C cell skos:exactMatch cellosaurus CVCL_1053 8305C semapv:UnspecifiedMatching 0.8 clo +clo 0001513 8505C cell skos:exactMatch cellosaurus CVCL_1054 8505C semapv:UnspecifiedMatching 0.8 clo +clo 0001523 8-MG-BA cell skos:exactMatch cellosaurus CVCL_1052 8-MG-BA semapv:UnspecifiedMatching 0.8 clo +clo 0001551 A101D cell skos:exactMatch cellosaurus CVCL_1057 A101D semapv:UnspecifiedMatching 0.8 clo +clo 0001551 A101D cell skos:exactMatch efo 0002100 A101D semapv:UnspecifiedMatching 0.8 clo +clo 0001565 A-204 cell skos:exactMatch cellosaurus CVCL_1058 A-204 semapv:UnspecifiedMatching 0.8 clo +clo 0001565 A-204 cell skos:exactMatch efo 0002102 A204 semapv:UnspecifiedMatching 0.8 clo +clo 0001566 A2058 cell skos:exactMatch cellosaurus CVCL_1059 A2058 semapv:UnspecifiedMatching 0.8 clo +clo 0001571 A2780 cell skos:exactMatch cellosaurus CVCL_0134 A2780 semapv:UnspecifiedMatching 0.8 clo +clo 0001582 A-375 cell skos:exactMatch cellosaurus CVCL_0132 A-375 semapv:UnspecifiedMatching 0.8 clo +clo 0001582 A-375 cell skos:exactMatch efo 0002103 A375 semapv:UnspecifiedMatching 0.8 clo +clo 0001584 A388 cell skos:exactMatch cellosaurus CVCL_1063 A-388 semapv:UnspecifiedMatching 0.8 clo +clo 0001590 A-427 cell skos:exactMatch cellosaurus CVCL_1055 A-427 semapv:UnspecifiedMatching 0.8 clo +clo 0001590 A-427 cell skos:exactMatch efo 0002104 A427 semapv:UnspecifiedMatching 0.8 clo +clo 0001601 A549 cell skos:exactMatch cellosaurus CVCL_0023 A-549 semapv:UnspecifiedMatching 0.8 clo +clo 0001601 A549 cell skos:exactMatch efo 0001086 A549 semapv:UnspecifiedMatching 0.8 clo +clo 0001641 ABC-1 cell skos:exactMatch cellosaurus CVCL_1066 ABC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0001641 ABC-1 cell skos:exactMatch efo 0002813 ABC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0001654 ACHN cell skos:exactMatch cellosaurus CVCL_1067 ACHN semapv:UnspecifiedMatching 0.8 clo +clo 0001654 ACHN cell skos:exactMatch efo 0002108 ACHN semapv:UnspecifiedMatching 0.8 clo +clo 0001655 ACN cell skos:exactMatch cellosaurus CVCL_1068 ACN semapv:UnspecifiedMatching 0.8 clo +clo 0001686 AGS cell skos:exactMatch cellosaurus CVCL_0139 AGS semapv:UnspecifiedMatching 0.8 clo +clo 0001686 AGS cell skos:exactMatch efo 0002109 AGS semapv:UnspecifiedMatching 0.8 clo +clo 0001705 ALL-PO cell skos:exactMatch cellosaurus CVCL_1069 ALL-PO semapv:UnspecifiedMatching 0.8 clo +clo 0001756 AsPC-1 cell skos:exactMatch cellosaurus CVCL_0152 AsPC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0001756 AsPC-1 cell skos:exactMatch efo 0002112 AsPC1 semapv:UnspecifiedMatching 0.8 clo +clo 0001769 AU565 cell skos:exactMatch cellosaurus CVCL_1074 AU565 semapv:UnspecifiedMatching 0.8 clo +clo 0001769 AU565 cell skos:exactMatch efo 0001087 AU565 semapv:UnspecifiedMatching 0.8 clo +clo 0001891 BC-3 cell skos:exactMatch cellosaurus CVCL_1080 BC-3 semapv:UnspecifiedMatching 0.8 clo +clo 0001891 BC-3 cell skos:exactMatch efo 0002046 BC-3 semapv:UnspecifiedMatching 0.8 clo +clo 0001906 B-CPAP cell skos:exactMatch cellosaurus CVCL_0153 B-CPAP semapv:UnspecifiedMatching 0.8 clo +clo 0001921 BE-13 cell skos:exactMatch cellosaurus CVCL_1081 BE-13 semapv:UnspecifiedMatching 0.8 clo +clo 0001926 BEN cell skos:exactMatch cellosaurus CVCL_1082 BEN semapv:UnspecifiedMatching 0.8 clo +clo 0001935 BeWo cell skos:exactMatch cellosaurus CVCL_0044 BeWo semapv:UnspecifiedMatching 0.8 clo +clo 0001935 BeWo cell skos:exactMatch efo 0002050 BeWo semapv:UnspecifiedMatching 0.8 clo +clo 0001948 BFTC-905 cell skos:exactMatch cellosaurus CVCL_1083 BFTC-905 semapv:UnspecifiedMatching 0.8 clo +clo 0001948 BFTC-905 cell skos:exactMatch efo 0002115 BFTC905 semapv:UnspecifiedMatching 0.8 clo +clo 0001949 BFTC-909 cell skos:exactMatch cellosaurus CVCL_1084 BFTC-909 semapv:UnspecifiedMatching 0.8 clo +clo 0001974 BHT-101 cell skos:exactMatch cellosaurus CVCL_1085 BHT-101 semapv:UnspecifiedMatching 0.8 clo +clo 0001974 BHT-101 cell skos:exactMatch efo 0002116 BHT101 semapv:UnspecifiedMatching 0.8 clo +clo 0001975 BHY cell skos:exactMatch cellosaurus CVCL_1086 BHY semapv:UnspecifiedMatching 0.8 clo +clo 0001987 BL-41 cell skos:exactMatch cellosaurus CVCL_1087 BL-41 semapv:UnspecifiedMatching 0.8 clo +clo 0001988 BL-70 cell skos:exactMatch cellosaurus CVCL_1088 BL-70 semapv:UnspecifiedMatching 0.8 clo +clo 0002041 BT-20 cell skos:exactMatch cellosaurus CVCL_0178 BT-20 semapv:UnspecifiedMatching 0.8 clo +clo 0002041 BT-20 cell skos:exactMatch efo 0001092 BT20 semapv:UnspecifiedMatching 0.8 clo +clo 0002042 BT-474 cell skos:exactMatch cellosaurus CVCL_0179 BT-474 semapv:UnspecifiedMatching 0.8 clo +clo 0002042 BT-474 cell skos:exactMatch efo 0001093 BT474 semapv:UnspecifiedMatching 0.8 clo +clo 0002044 BT-549 cell skos:exactMatch cellosaurus CVCL_1092 BT-549 semapv:UnspecifiedMatching 0.8 clo +clo 0002044 BT-549 cell skos:exactMatch efo 0001096 BT549 semapv:UnspecifiedMatching 0.8 clo +clo 0002052 BV-173 cell skos:exactMatch cellosaurus CVCL_0181 BV-173 semapv:UnspecifiedMatching 0.8 clo +clo 0002065 BxPC-3 cell skos:exactMatch cellosaurus CVCL_0186 BxPC-3 semapv:UnspecifiedMatching 0.8 clo +clo 0002065 BxPC-3 cell skos:exactMatch efo 0002709 BxPC-3 semapv:UnspecifiedMatching 0.8 clo +clo 0002108 C2BBe1 cell skos:exactMatch cellosaurus CVCL_1096 C2BBe1 semapv:UnspecifiedMatching 0.8 clo +clo 0002113 C32 cell skos:exactMatch cellosaurus CVCL_1097 C32 [Human melanoma] semapv:UnspecifiedMatching 0.8 clo +clo 0002119 C3A cell skos:exactMatch cellosaurus CVCL_1098 Hep-G2/C3A semapv:UnspecifiedMatching 0.8 clo +clo 0002119 C3A cell skos:exactMatch efo 0002121 C3A semapv:UnspecifiedMatching 0.8 clo +clo 0002149 C8166 cell skos:exactMatch cellosaurus CVCL_1099 C8166 semapv:UnspecifiedMatching 0.8 clo +clo 0002168 CA46 cell skos:exactMatch cellosaurus CVCL_1101 CA46 semapv:UnspecifiedMatching 0.8 clo +clo 0002168 CA46 cell skos:exactMatch efo 0002124 CA46 semapv:UnspecifiedMatching 0.8 clo +clo 0002172 Caco-2 cell skos:exactMatch cellosaurus CVCL_0025 Caco-2 semapv:UnspecifiedMatching 0.8 clo +clo 0002172 Caco-2 cell skos:exactMatch efo 0001099 Caco-2 semapv:UnspecifiedMatching 0.8 clo +clo 0002176 Caki-1 cell skos:exactMatch cellosaurus CVCL_0234 Caki-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002176 Caki-1 cell skos:exactMatch efo 0002149 Caki1 semapv:UnspecifiedMatching 0.8 clo +clo 0002179 CAL-120 cell skos:exactMatch cellosaurus CVCL_1104 CAL-120 semapv:UnspecifiedMatching 0.8 clo +clo 0002179 CAL-120 cell skos:exactMatch efo 0005356 CAL120 semapv:UnspecifiedMatching 0.8 clo +clo 0002180 CAL-12T cell skos:exactMatch cellosaurus CVCL_1105 CAL-12T semapv:UnspecifiedMatching 0.8 clo +clo 0002181 CAL-148 cell skos:exactMatch cellosaurus CVCL_1106 CAL-148 semapv:UnspecifiedMatching 0.8 clo +clo 0002181 CAL-148 cell skos:exactMatch efo 0005357 CAL148 semapv:UnspecifiedMatching 0.8 clo +clo 0002183 CAL-33 cell skos:exactMatch cellosaurus CVCL_1108 CAL-33 semapv:UnspecifiedMatching 0.8 clo +clo 0002184 CAL-39 cell skos:exactMatch cellosaurus CVCL_1109 CAL-39 semapv:UnspecifiedMatching 0.8 clo +clo 0002185 CAL-51 cell skos:exactMatch cellosaurus CVCL_1110 CAL-51 semapv:UnspecifiedMatching 0.8 clo +clo 0002185 CAL-51 cell skos:exactMatch efo 0005358 CAL51 semapv:UnspecifiedMatching 0.8 clo +clo 0002186 CAL-54 cell skos:exactMatch cellosaurus CVCL_1111 CAL-54 semapv:UnspecifiedMatching 0.8 clo +clo 0002186 CAL-54 cell skos:exactMatch efo 0002125 CAL54 semapv:UnspecifiedMatching 0.8 clo +clo 0002187 CAL-62 cell skos:exactMatch cellosaurus CVCL_1112 CAL-62 semapv:UnspecifiedMatching 0.8 clo +clo 0002187 CAL-62 cell skos:exactMatch efo 0002126 CAL62 semapv:UnspecifiedMatching 0.8 clo +clo 0002188 CAL-72 cell skos:exactMatch cellosaurus CVCL_1113 CAL-72 semapv:UnspecifiedMatching 0.8 clo +clo 0002190 CAL-85-1 cell skos:exactMatch cellosaurus CVCL_1114 CAL-85-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002190 CAL-85-1 cell skos:exactMatch efo 0005359 CAL851 semapv:UnspecifiedMatching 0.8 clo +clo 0002191 Calu-1 cell skos:exactMatch cellosaurus CVCL_0608 Calu-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002191 Calu-1 cell skos:exactMatch efo 0002151 Calu1 semapv:UnspecifiedMatching 0.8 clo +clo 0002192 Calu-3 cell skos:exactMatch cellosaurus CVCL_0609 Calu-3 semapv:UnspecifiedMatching 0.8 clo +clo 0002192 Calu-3 cell skos:exactMatch efo 0002819 Calu3 semapv:UnspecifiedMatching 0.8 clo +clo 0002193 Calu-6 cell skos:exactMatch cellosaurus CVCL_0236 Calu-6 semapv:UnspecifiedMatching 0.8 clo +clo 0002193 Calu-6 cell skos:exactMatch efo 0002152 Calu6 semapv:UnspecifiedMatching 0.8 clo +clo 0002194 CAMA-1 cell skos:exactMatch cellosaurus CVCL_1115 CAMA-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002194 CAMA-1 cell skos:exactMatch efo 0001100 CAMA1 semapv:UnspecifiedMatching 0.8 clo +clo 0002196 Caov-4 cell skos:exactMatch cellosaurus CVCL_0202 Caov-4 semapv:UnspecifiedMatching 0.8 clo +clo 0002197 Capan-1 cell skos:exactMatch cellosaurus CVCL_0237 Capan-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002197 Capan-1 cell skos:exactMatch efo 0002153 Capan1 semapv:UnspecifiedMatching 0.8 clo +clo 0002198 Capan-2 cell skos:exactMatch cellosaurus CVCL_0026 Capan-2 semapv:UnspecifiedMatching 0.8 clo +clo 0002198 Capan-2 cell skos:exactMatch efo 0002154 Capan2 semapv:UnspecifiedMatching 0.8 clo +clo 0002200 CAS-1 cell skos:exactMatch cellosaurus CVCL_1117 CAS-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002329 CCF-STTG1 cell skos:exactMatch cellosaurus CVCL_1118 CCF-STTG1 semapv:UnspecifiedMatching 0.8 clo +clo 0002329 CCF-STTG1 cell skos:exactMatch efo 0002127 CCFSTTG1 semapv:UnspecifiedMatching 0.8 clo +clo 0002334 CCRF-CEM cell skos:exactMatch cellosaurus CVCL_0207 CCRF-CEM semapv:UnspecifiedMatching 0.8 clo +clo 0002334 CCRF-CEM cell skos:exactMatch efo 0002128 CCRFCEM semapv:UnspecifiedMatching 0.8 clo +clo 0002336 CCRF-SB cell skos:exactMatch cellosaurus CVCL_1860 CCRF-SB semapv:UnspecifiedMatching 0.8 clo +clo 0002356 CEM/C2 cell skos:exactMatch cellosaurus CVCL_3497 CEM/C2 semapv:UnspecifiedMatching 0.8 clo +clo 0002360 CESS cell skos:exactMatch cellosaurus CVCL_0209 CESS semapv:UnspecifiedMatching 0.8 clo +clo 0002360 CESS cell skos:exactMatch efo 0002130 CESS semapv:UnspecifiedMatching 0.8 clo +clo 0002395 CFPAC-1 cell skos:exactMatch cellosaurus CVCL_1119 CFPAC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002406 CGTH-W-1 cell skos:exactMatch cellosaurus CVCL_1120 CGTH-W-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002413 ChaGo-K-1 cell skos:exactMatch cellosaurus CVCL_1121 ChaGo-K-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002413 ChaGo-K-1 cell skos:exactMatch efo 0002155 ChaGoK1 semapv:UnspecifiedMatching 0.8 clo +clo 0002472 CHP-126 cell skos:exactMatch cellosaurus CVCL_1123 CHP-126 semapv:UnspecifiedMatching 0.8 clo +clo 0002526 CMK cell skos:exactMatch cellosaurus CVCL_0216 CMK semapv:UnspecifiedMatching 0.8 clo +clo 0002526 CMK cell skos:exactMatch efo 0003037 CMK semapv:UnspecifiedMatching 0.8 clo +clo 0002544 COLO 205 cell skos:exactMatch cellosaurus CVCL_0218 COLO 205 semapv:UnspecifiedMatching 0.8 clo +clo 0002544 COLO 205 cell skos:exactMatch efo 0003082 COLO205 semapv:UnspecifiedMatching 0.8 clo +clo 0002546 COLO 320DM cell skos:exactMatch cellosaurus CVCL_0219 COLO 320DM semapv:UnspecifiedMatching 0.8 clo +clo 0002546 COLO 320DM cell skos:exactMatch efo 0002136 COLO320DM semapv:UnspecifiedMatching 0.8 clo +clo 0002551 COLO 679 cell skos:exactMatch cellosaurus CVCL_1130 COLO 679 semapv:UnspecifiedMatching 0.8 clo +clo 0002572 COLO-678 cell skos:exactMatch cellosaurus CVCL_1129 COLO 678 semapv:UnspecifiedMatching 0.8 clo +clo 0002573 COLO-680N cell skos:exactMatch cellosaurus CVCL_1131 COLO 680N semapv:UnspecifiedMatching 0.8 clo +clo 0002577 COLO-824 cell skos:exactMatch cellosaurus CVCL_1136 COLO 824 semapv:UnspecifiedMatching 0.8 clo +clo 0002585 COR-L23 cell skos:exactMatch cellosaurus CVCL_1139 COR-L23 semapv:UnspecifiedMatching 0.8 clo +clo 0002589 COR-L279 cell skos:exactMatch cellosaurus CVCL_1140 COR-L279 semapv:UnspecifiedMatching 0.8 clo +clo 0002594 COR-L88 cell skos:exactMatch cellosaurus CVCL_1141 COR-L88 semapv:UnspecifiedMatching 0.8 clo +clo 0002602 CPC-N cell skos:exactMatch cellosaurus CVCL_1146 CPC-N semapv:UnspecifiedMatching 0.8 clo +clo 0002638 CTV-1 cell skos:exactMatch cellosaurus CVCL_1150 CTV-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002698 DAN-G cell skos:exactMatch cellosaurus CVCL_0243 DAN-G semapv:UnspecifiedMatching 0.8 clo +clo 0002699 Daoy cell skos:exactMatch cellosaurus CVCL_1167 Daoy semapv:UnspecifiedMatching 0.8 clo +clo 0002708 Daudi cell skos:exactMatch cellosaurus CVCL_0008 Daudi semapv:UnspecifiedMatching 0.8 clo +clo 0002708 Daudi cell skos:exactMatch efo 0002169 Daudi semapv:UnspecifiedMatching 0.8 clo +clo 0002709 DB cell skos:exactMatch cellosaurus CVCL_1168 DB semapv:UnspecifiedMatching 0.8 clo +clo 0002709 DB cell skos:exactMatch efo 0002158 DB semapv:UnspecifiedMatching 0.8 clo +clo 0002723 DBTRG-05MG cell skos:exactMatch cellosaurus CVCL_1169 DBTRG-05MG semapv:UnspecifiedMatching 0.8 clo +clo 0002723 DBTRG-05MG cell skos:exactMatch efo 0002159 DBTRG05MG semapv:UnspecifiedMatching 0.8 clo +clo 0002752 Detroit 562 cell skos:exactMatch cellosaurus CVCL_1171 Detroit 562 semapv:UnspecifiedMatching 0.8 clo +clo 0002752 Detroit 562 cell skos:exactMatch efo 0002170 Detroit562 semapv:UnspecifiedMatching 0.8 clo +clo 0002767 DG-75 cell skos:exactMatch cellosaurus CVCL_0244 DG-75 semapv:UnspecifiedMatching 0.8 clo +clo 0002782 DK-MG cell skos:exactMatch cellosaurus CVCL_1173 DK-MG semapv:UnspecifiedMatching 0.8 clo +clo 0002782 DK-MG cell skos:exactMatch efo 0002161 DKMG semapv:UnspecifiedMatching 0.8 clo +clo 0002785 DLD-1 cell skos:exactMatch cellosaurus CVCL_0248 DLD-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002847 DV-90 cell skos:exactMatch cellosaurus CVCL_1184 DV-90 semapv:UnspecifiedMatching 0.8 clo +clo 0002873 EB2 cell skos:exactMatch cellosaurus CVCL_1186 EB2 semapv:UnspecifiedMatching 0.8 clo +clo 0002873 EB2 cell skos:exactMatch efo 0002173 EB2 semapv:UnspecifiedMatching 0.8 clo +clo 0002874 EB-3 cell skos:exactMatch cellosaurus CVCL_1185 EB3 [Human Burkitt lymphoma] semapv:UnspecifiedMatching 0.8 clo +clo 0002887 EFE-184 cell skos:exactMatch cellosaurus CVCL_1191 EFE-184 semapv:UnspecifiedMatching 0.8 clo +clo 0002888 EFM-19 cell skos:exactMatch cellosaurus CVCL_0253 EFM-19 semapv:UnspecifiedMatching 0.8 clo +clo 0002888 EFM-19 cell skos:exactMatch efo 0002175 EFM19 semapv:UnspecifiedMatching 0.8 clo +clo 0002892 EFO-21 cell skos:exactMatch cellosaurus CVCL_0029 EFO-21 semapv:UnspecifiedMatching 0.8 clo +clo 0002893 EFO-27 cell skos:exactMatch cellosaurus CVCL_1192 EFO-27 semapv:UnspecifiedMatching 0.8 clo +clo 0002895 EGI-1 cell skos:exactMatch cellosaurus CVCL_1193 EGI-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002899 EHEB cell skos:exactMatch cellosaurus CVCL_1194 EHEB semapv:UnspecifiedMatching 0.8 clo +clo 0002913 EL4 cell skos:exactMatch cellosaurus CVCL_0255 EL4 semapv:UnspecifiedMatching 0.8 clo +clo 0002922 EM-2 cell skos:exactMatch cellosaurus CVCL_1196 EM-2 semapv:UnspecifiedMatching 0.8 clo +clo 0002922 EM-2 cell skos:exactMatch efo 0002176 EM2 semapv:UnspecifiedMatching 0.8 clo +clo 0002942 EPLC-272H cell skos:exactMatch cellosaurus CVCL_1197 EPLC-272H semapv:UnspecifiedMatching 0.8 clo +clo 0002954 ESS-1 cell skos:exactMatch cellosaurus CVCL_1205 ESS-1 semapv:UnspecifiedMatching 0.8 clo +clo 0002955 EVSA-T cell skos:exactMatch cellosaurus CVCL_1207 Evsa-T semapv:UnspecifiedMatching 0.8 clo +clo 0002993 FaDu cell skos:exactMatch cellosaurus CVCL_1218 FaDu semapv:UnspecifiedMatching 0.8 clo +clo 0002993 FaDu cell skos:exactMatch efo 0002178 FaDu semapv:UnspecifiedMatching 0.8 clo +clo 0003402 FTC-133 cell skos:exactMatch cellosaurus CVCL_1219 FTC-133 semapv:UnspecifiedMatching 0.8 clo +clo 0003433 G-361 cell skos:exactMatch cellosaurus CVCL_1220 G-361 semapv:UnspecifiedMatching 0.8 clo +clo 0003434 G-401 cell skos:exactMatch cellosaurus CVCL_0270 G-401 semapv:UnspecifiedMatching 0.8 clo +clo 0003434 G-401 cell skos:exactMatch efo 0002179 G401 semapv:UnspecifiedMatching 0.8 clo +clo 0003435 G-402 cell skos:exactMatch cellosaurus CVCL_1221 G-402 semapv:UnspecifiedMatching 0.8 clo +clo 0003435 G-402 cell skos:exactMatch efo 0002180 G402 semapv:UnspecifiedMatching 0.8 clo +clo 0003450 GAMG cell skos:exactMatch cellosaurus CVCL_1226 GaMG semapv:UnspecifiedMatching 0.8 clo +clo 0003464 GCT cell skos:exactMatch cellosaurus CVCL_1229 GCT semapv:UnspecifiedMatching 0.8 clo +clo 0003464 GCT cell skos:exactMatch efo 0002182 GCT semapv:UnspecifiedMatching 0.8 clo +clo 0003467 GDM-1 cell skos:exactMatch cellosaurus CVCL_1230 GDM-1 semapv:UnspecifiedMatching 0.8 clo +clo 0003467 GDM-1 cell skos:exactMatch efo 0002183 GDM1 semapv:UnspecifiedMatching 0.8 clo +clo 0003494 GI-ME-N cell skos:exactMatch cellosaurus CVCL_1232 GI-ME-N semapv:UnspecifiedMatching 0.8 clo +clo 0003547 GMS-10 cell skos:exactMatch cellosaurus CVCL_1233 GMS-10 semapv:UnspecifiedMatching 0.8 clo +clo 0003555 GP5d cell skos:exactMatch cellosaurus CVCL_1235 GP5d semapv:UnspecifiedMatching 0.8 clo +clo 0003599 H4 cell skos:exactMatch cellosaurus CVCL_1239 H4 semapv:UnspecifiedMatching 0.8 clo +clo 0003599 H4 cell skos:exactMatch efo 0002184 H4 semapv:UnspecifiedMatching 0.8 clo +clo 0003612 H9 cell skos:exactMatch cellosaurus CVCL_1240 H9 semapv:UnspecifiedMatching 0.8 clo +clo 0003612 H9 cell skos:exactMatch efo 0003045 H9 semapv:UnspecifiedMatching 0.8 clo +clo 0003627 HC-1 cell skos:exactMatch cellosaurus CVCL_1243 HC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0003630 HCC1143 cell skos:exactMatch cellosaurus CVCL_1245 HCC1143 semapv:UnspecifiedMatching 0.8 clo +clo 0003630 HCC1143 cell skos:exactMatch efo 0001169 HCC1143 semapv:UnspecifiedMatching 0.8 clo +clo 0003632 HCC1187 cell skos:exactMatch cellosaurus CVCL_1247 HCC1187 semapv:UnspecifiedMatching 0.8 clo +clo 0003632 HCC1187 cell skos:exactMatch efo 0001170 HCC1187 semapv:UnspecifiedMatching 0.8 clo +clo 0003634 HCC1395 cell skos:exactMatch cellosaurus CVCL_1249 HCC1395 semapv:UnspecifiedMatching 0.8 clo +clo 0003634 HCC1395 cell skos:exactMatch efo 0002185 HCC1395 semapv:UnspecifiedMatching 0.8 clo +clo 0003636 HCC1419 cell skos:exactMatch cellosaurus CVCL_1251 HCC1419 semapv:UnspecifiedMatching 0.8 clo +clo 0003636 HCC1419 cell skos:exactMatch efo 0005372 HCC1419 semapv:UnspecifiedMatching 0.8 clo +clo 0003640 HCC1569 cell skos:exactMatch cellosaurus CVCL_1255 HCC1569 semapv:UnspecifiedMatching 0.8 clo +clo 0003640 HCC1569 cell skos:exactMatch efo 0001173 HCC1569 semapv:UnspecifiedMatching 0.8 clo +clo 0003641 HCC1599 cell skos:exactMatch cellosaurus CVCL_1256 HCC1599 semapv:UnspecifiedMatching 0.8 clo +clo 0003641 HCC1599 cell skos:exactMatch efo 0002186 HCC1599 semapv:UnspecifiedMatching 0.8 clo +clo 0003644 HCC1806 cell skos:exactMatch cellosaurus CVCL_1258 HCC1806 semapv:UnspecifiedMatching 0.8 clo +clo 0003644 HCC1806 cell skos:exactMatch efo 0005373 HCC1806 semapv:UnspecifiedMatching 0.8 clo +clo 0003645 HCC1937 cell skos:exactMatch cellosaurus CVCL_0290 HCC1937 semapv:UnspecifiedMatching 0.8 clo +clo 0003645 HCC1937 cell skos:exactMatch efo 0001174 HCC1937 semapv:UnspecifiedMatching 0.8 clo +clo 0003647 HCC1954 cell skos:exactMatch cellosaurus CVCL_1259 HCC1954 semapv:UnspecifiedMatching 0.8 clo +clo 0003647 HCC1954 cell skos:exactMatch efo 0001175 HCC1954 semapv:UnspecifiedMatching 0.8 clo +clo 0003650 HCC2157 cell skos:exactMatch cellosaurus CVCL_1261 HCC2157 semapv:UnspecifiedMatching 0.8 clo +clo 0003650 HCC2157 cell skos:exactMatch efo 0001177 HCC2157 semapv:UnspecifiedMatching 0.8 clo +clo 0003652 HCC2218 cell skos:exactMatch cellosaurus CVCL_1263 HCC2218 semapv:UnspecifiedMatching 0.8 clo +clo 0003652 HCC2218 cell skos:exactMatch efo 0002187 HCC2218 semapv:UnspecifiedMatching 0.8 clo +clo 0003655 HCC38 cell skos:exactMatch cellosaurus CVCL_1267 HCC38 semapv:UnspecifiedMatching 0.8 clo +clo 0003655 HCC38 cell skos:exactMatch efo 0001180 HCC38 semapv:UnspecifiedMatching 0.8 clo +clo 0003658 HCC70 cell skos:exactMatch cellosaurus CVCL_1270 HCC70 semapv:UnspecifiedMatching 0.8 clo +clo 0003658 HCC70 cell skos:exactMatch efo 0001181 HCC70 semapv:UnspecifiedMatching 0.8 clo +clo 0003665 HCT 116 cell skos:exactMatch cellosaurus CVCL_0291 HCT 116 semapv:UnspecifiedMatching 0.8 clo +clo 0003666 HCT-15 cell skos:exactMatch cellosaurus CVCL_0292 HCT 15 semapv:UnspecifiedMatching 0.8 clo +clo 0003666 HCT-15 cell skos:exactMatch efo 0002188 HCT15 semapv:UnspecifiedMatching 0.8 clo +clo 0003667 HCT-8 cell skos:exactMatch cellosaurus CVCL_2478 HCT 8 semapv:UnspecifiedMatching 0.8 clo +clo 0003667 HCT-8 cell skos:exactMatch efo 0002189 HCT8 semapv:UnspecifiedMatching 0.8 clo +clo 0003671 HDLM-2 cell skos:exactMatch cellosaurus CVCL_0009 HDLM-2 semapv:UnspecifiedMatching 0.8 clo +clo 0003672 HD-MY-Z cell skos:exactMatch cellosaurus CVCL_1273 HD-MY-Z semapv:UnspecifiedMatching 0.8 clo +clo 0003679 HEL cell skos:exactMatch cellosaurus CVCL_0001 HEL semapv:UnspecifiedMatching 0.8 clo +clo 0003684 HeLa cell skos:exactMatch cellosaurus CVCL_0030 HeLa semapv:UnspecifiedMatching 0.8 clo +clo 0003684 HeLa cell skos:exactMatch efo 0001185 HeLa semapv:UnspecifiedMatching 0.8 clo +clo 0003701 H-EMC-SS cell skos:exactMatch cellosaurus CVCL_1238 H-EMC-SS semapv:UnspecifiedMatching 0.8 clo +clo 0003704 Hep G2 cell skos:exactMatch cellosaurus CVCL_0027 Hep-G2 semapv:UnspecifiedMatching 0.8 clo +clo 0003739 HGC-27 cell skos:exactMatch cellosaurus CVCL_1279 HGC-27 semapv:UnspecifiedMatching 0.8 clo +clo 0003744 HH cell skos:exactMatch cellosaurus CVCL_1280 HH [Human lymphoma] semapv:UnspecifiedMatching 0.8 clo +clo 0003744 HH cell skos:exactMatch efo 0002194 HH semapv:UnspecifiedMatching 0.8 clo +clo 0003775 HL-60 cell skos:exactMatch cellosaurus CVCL_0002 HL-60 semapv:UnspecifiedMatching 0.8 clo +clo 0003775 HL-60 cell skos:exactMatch efo 0002793 HL-60 semapv:UnspecifiedMatching 0.8 clo +clo 0003787 HMy2.CIR cell skos:exactMatch cellosaurus CVCL_3714 HMy2.C1R semapv:UnspecifiedMatching 0.8 clo +clo 0003788 HN cell skos:exactMatch cellosaurus CVCL_1283 HN semapv:UnspecifiedMatching 0.8 clo +clo 0003795 HOS cell skos:exactMatch cellosaurus CVCL_0312 HOS semapv:UnspecifiedMatching 0.8 clo +clo 0003795 HOS cell skos:exactMatch efo 0002196 HOS semapv:UnspecifiedMatching 0.8 clo +clo 0003814 HPAC cell skos:exactMatch cellosaurus CVCL_3517 HPAC semapv:UnspecifiedMatching 0.8 clo +clo 0003814 HPAC cell skos:exactMatch efo 0002197 HPAC semapv:UnspecifiedMatching 0.8 clo +clo 0003816 HPAF-II cell skos:exactMatch cellosaurus CVCL_0313 HPAF-II semapv:UnspecifiedMatching 0.8 clo +clo 0003816 HPAF-II cell skos:exactMatch efo 0002198 HPAFII semapv:UnspecifiedMatching 0.8 clo +clo 0004046 Hs 683 cell skos:exactMatch cellosaurus CVCL_0844 Hs 683 semapv:UnspecifiedMatching 0.8 clo +clo 0004094 Hs 746T cell skos:exactMatch cellosaurus CVCL_0333 Hs 746.T semapv:UnspecifiedMatching 0.8 clo +clo 0004265 HT cell skos:exactMatch cellosaurus CVCL_1290 HT semapv:UnspecifiedMatching 0.8 clo +clo 0004265 HT cell skos:exactMatch efo 0002200 HT semapv:UnspecifiedMatching 0.8 clo +clo 0004278 HT-1197 cell skos:exactMatch cellosaurus CVCL_1291 HT-1197 semapv:UnspecifiedMatching 0.8 clo +clo 0004278 HT-1197 cell skos:exactMatch efo 0002202 HT1197 semapv:UnspecifiedMatching 0.8 clo +clo 0004280 HT-144 cell skos:exactMatch cellosaurus CVCL_0318 HT-144 semapv:UnspecifiedMatching 0.8 clo +clo 0004283 HT-29 cell skos:exactMatch cellosaurus CVCL_0320 HT-29 semapv:UnspecifiedMatching 0.8 clo +clo 0004283 HT-29 cell skos:exactMatch efo 0001193 HT-29 semapv:UnspecifiedMatching 0.8 clo +clo 0004286 HT-3 cell skos:exactMatch cellosaurus CVCL_1293 HT-3 semapv:UnspecifiedMatching 0.8 clo +clo 0004286 HT-3 cell skos:exactMatch efo 0002204 HT3 semapv:UnspecifiedMatching 0.8 clo +clo 0004287 HT55 cell skos:exactMatch cellosaurus CVCL_1294 HT-55 semapv:UnspecifiedMatching 0.8 clo +clo 0004300 HUP-T3 cell skos:exactMatch cellosaurus CVCL_1299 HuP-T3 semapv:UnspecifiedMatching 0.8 clo +clo 0004302 HUP-T4 cell skos:exactMatch cellosaurus CVCL_1300 HuP-T4 semapv:UnspecifiedMatching 0.8 clo +clo 0004302 HUP-T4 cell skos:exactMatch efo 0002208 HuPT4 semapv:UnspecifiedMatching 0.8 clo +clo 0004304 HuT 78 cell skos:exactMatch cellosaurus CVCL_0337 HuT 78 semapv:UnspecifiedMatching 0.8 clo +clo 0004304 HuT 78 cell skos:exactMatch efo 0002209 HuT78 semapv:UnspecifiedMatching 0.8 clo +clo 0006669 IGR-1 cell skos:exactMatch cellosaurus CVCL_1303 IGR-1 semapv:UnspecifiedMatching 0.8 clo +clo 0006948 IMR-32 cell skos:exactMatch cellosaurus CVCL_0346 IMR-32 semapv:UnspecifiedMatching 0.8 clo +clo 0006948 IMR-32 cell skos:exactMatch efo 0001195 IMR-32 semapv:UnspecifiedMatching 0.8 clo +clo 0006950 IMR-5 cell skos:exactMatch cellosaurus CVCL_1306 IMR-5 semapv:UnspecifiedMatching 0.8 clo +clo 0006961 IPC-298 cell skos:exactMatch cellosaurus CVCL_1307 IPC-298 semapv:UnspecifiedMatching 0.8 clo +clo 0006969 IST-MEL1 cell skos:exactMatch cellosaurus CVCL_1308 IST-MEL1 semapv:UnspecifiedMatching 0.8 clo +clo 0006972 IST-MES1 cell skos:exactMatch cellosaurus CVCL_1311 IST-Mes1 semapv:UnspecifiedMatching 0.8 clo +clo 0006974 IST-SL1 cell skos:exactMatch cellosaurus CVCL_1313 IST-SL1 semapv:UnspecifiedMatching 0.8 clo +clo 0006975 IST-SL2 cell skos:exactMatch cellosaurus CVCL_1314 IST-SL2 semapv:UnspecifiedMatching 0.8 clo +clo 0007006 J82 cell skos:exactMatch cellosaurus CVCL_0359 J82 semapv:UnspecifiedMatching 0.8 clo +clo 0007006 J82 cell skos:exactMatch efo 0002210 J82 semapv:UnspecifiedMatching 0.8 clo +clo 0007011 JAR cell skos:exactMatch cellosaurus CVCL_0360 JAR semapv:UnspecifiedMatching 0.8 clo +clo 0007011 JAR cell skos:exactMatch efo 0002211 JAR semapv:UnspecifiedMatching 0.8 clo +clo 0007012 JAWSII cell skos:exactMatch cellosaurus CVCL_3727 JAWSII semapv:UnspecifiedMatching 0.8 clo +clo 0007017 JEG-3 cell skos:exactMatch cellosaurus CVCL_0363 JEG-3 semapv:UnspecifiedMatching 0.8 clo +clo 0007030 JM1 cell skos:exactMatch cellosaurus CVCL_3532 JM-1 semapv:UnspecifiedMatching 0.8 clo +clo 0007030 JM1 cell skos:exactMatch efo 0002212 JM1 semapv:UnspecifiedMatching 0.8 clo +clo 0007043 JURKAT cell skos:exactMatch cellosaurus CVCL_0065 Jurkat semapv:UnspecifiedMatching 0.8 clo +clo 0007047 JVM-2 cell skos:exactMatch cellosaurus CVCL_1319 JVM-2 semapv:UnspecifiedMatching 0.8 clo +clo 0007048 JVM-3 cell skos:exactMatch cellosaurus CVCL_1320 JVM-3 semapv:UnspecifiedMatching 0.8 clo +clo 0007059 K-562 cell skos:exactMatch efo 0002067 K562 semapv:UnspecifiedMatching 0.8 clo +clo 0007065 KARPAS-299 cell skos:exactMatch cellosaurus CVCL_1324 Karpas-299 semapv:UnspecifiedMatching 0.8 clo +clo 0007065 KARPAS-299 cell skos:exactMatch efo 0005390 KARPAS 299 semapv:UnspecifiedMatching 0.8 clo +clo 0007066 KARPAS-422 cell skos:exactMatch cellosaurus CVCL_1325 Karpas-422 semapv:UnspecifiedMatching 0.8 clo +clo 0007067 KARPAS-45 cell skos:exactMatch cellosaurus CVCL_1326 Karpas-45 semapv:UnspecifiedMatching 0.8 clo +clo 0007089 KE-37 cell skos:exactMatch cellosaurus CVCL_1327 KE-37 semapv:UnspecifiedMatching 0.8 clo +clo 0007104 KLE cell skos:exactMatch cellosaurus CVCL_1329 KLE semapv:UnspecifiedMatching 0.8 clo +clo 0007104 KLE cell skos:exactMatch efo 0002220 KLE semapv:UnspecifiedMatching 0.8 clo +clo 0007112 KM-H2 cell skos:exactMatch cellosaurus CVCL_1330 KM-H2 semapv:UnspecifiedMatching 0.8 clo +clo 0007114 KMOE-2 cell skos:exactMatch cellosaurus CVCL_1332 KMOE-2 semapv:UnspecifiedMatching 0.8 clo +clo 0007123 KU-19-19 cell skos:exactMatch cellosaurus CVCL_1344 KU-19-19 semapv:UnspecifiedMatching 0.8 clo +clo 0007128 KYSE-140 cell skos:exactMatch cellosaurus CVCL_1347 KYSE-140 semapv:UnspecifiedMatching 0.8 clo +clo 0007130 KYSE-180 cell skos:exactMatch cellosaurus CVCL_1349 KYSE-180 semapv:UnspecifiedMatching 0.8 clo +clo 0007131 KYSE-270 cell skos:exactMatch cellosaurus CVCL_1350 KYSE-270 semapv:UnspecifiedMatching 0.8 clo +clo 0007133 KYSE-410 cell skos:exactMatch cellosaurus CVCL_1352 KYSE-410 semapv:UnspecifiedMatching 0.8 clo +clo 0007134 KYSE-450 cell skos:exactMatch cellosaurus CVCL_1353 KYSE-450 semapv:UnspecifiedMatching 0.8 clo +clo 0007135 KYSE-510 cell skos:exactMatch cellosaurus CVCL_1354 KYSE-510 semapv:UnspecifiedMatching 0.8 clo +clo 0007186 L-363 cell skos:exactMatch cellosaurus CVCL_1357 L-363 semapv:UnspecifiedMatching 0.8 clo +clo 0007189 L-428 cell skos:exactMatch cellosaurus CVCL_1361 L-428 semapv:UnspecifiedMatching 0.8 clo +clo 0007201 L-540 cell skos:exactMatch cellosaurus CVCL_1362 L-540 semapv:UnspecifiedMatching 0.8 clo +clo 0007238 LAMA-84 cell skos:exactMatch cellosaurus CVCL_0388 LAMA-84 semapv:UnspecifiedMatching 0.8 clo +clo 0007283 LCLC-97TM1 cell skos:exactMatch cellosaurus CVCL_1376 LCLC-97TM1 semapv:UnspecifiedMatching 0.8 clo +clo 0007336 L-M cell skos:exactMatch cellosaurus CVCL_4535 L-M semapv:UnspecifiedMatching 0.8 clo +clo 0007364 LN-405 cell skos:exactMatch cellosaurus CVCL_1378 LN-405 semapv:UnspecifiedMatching 0.8 clo +clo 0007375 Loucy cell skos:exactMatch cellosaurus CVCL_1380 Loucy semapv:UnspecifiedMatching 0.8 clo +clo 0007378 LoVo cell skos:exactMatch cellosaurus CVCL_0399 LoVo semapv:UnspecifiedMatching 0.8 clo +clo 0007379 LP-1 cell skos:exactMatch cellosaurus CVCL_0012 LP-1 semapv:UnspecifiedMatching 0.8 clo +clo 0007379 LP-1 cell skos:exactMatch efo 0003055 LP1 semapv:UnspecifiedMatching 0.8 clo +clo 0007403 LS174T cell skos:exactMatch cellosaurus CVCL_1384 LS174T semapv:UnspecifiedMatching 0.8 clo +clo 0007403 LS174T cell skos:exactMatch efo 0002227 LS174T semapv:UnspecifiedMatching 0.8 clo +clo 0007445 M059J cell skos:exactMatch cellosaurus CVCL_0400 M059J semapv:UnspecifiedMatching 0.8 clo +clo 0007578 MC116 cell skos:exactMatch cellosaurus CVCL_1399 MC116 semapv:UnspecifiedMatching 0.8 clo +clo 0007578 MC116 cell skos:exactMatch efo 0002228 MC116 semapv:UnspecifiedMatching 0.8 clo +clo 0007599 MCF 10A cell skos:exactMatch cellosaurus CVCL_0598 MCF-10A semapv:UnspecifiedMatching 0.8 clo +clo 0007599 MCF 10A cell skos:exactMatch efo 0001200 MCF 10A semapv:UnspecifiedMatching 0.8 clo +clo 0007600 MCF 10F cell skos:exactMatch cellosaurus CVCL_3633 MCF-10F semapv:UnspecifiedMatching 0.8 clo +clo 0007602 MCF-10-2A cell skos:exactMatch cellosaurus CVCL_3743 MCF-10-2A semapv:UnspecifiedMatching 0.8 clo +clo 0007606 MCF7 cell skos:exactMatch cellosaurus CVCL_0031 MCF-7 semapv:UnspecifiedMatching 0.8 clo +clo 0007615 MC-IXC cell skos:exactMatch cellosaurus CVCL_1398 SK-N-MC-IXC semapv:UnspecifiedMatching 0.8 clo +clo 0007615 MC-IXC cell skos:exactMatch efo 0002230 MCIXC semapv:UnspecifiedMatching 0.8 clo +clo 0007631 MDA-MB-134-VI cell skos:exactMatch cellosaurus CVCL_0617 MDA-MB-134-VI semapv:UnspecifiedMatching 0.8 clo +clo 0007631 MDA-MB-134-VI cell skos:exactMatch efo 0001205 MDAMB134VI semapv:UnspecifiedMatching 0.8 clo +clo 0007632 MDA-MB-157 cell skos:exactMatch cellosaurus CVCL_0618 MDA-MB-157 semapv:UnspecifiedMatching 0.8 clo +clo 0007632 MDA-MB-157 cell skos:exactMatch efo 0001206 MDAMB157 semapv:UnspecifiedMatching 0.8 clo +clo 0007633 MDA-MB-175-VII cell skos:exactMatch cellosaurus CVCL_1400 MDA-MB-175-VII semapv:UnspecifiedMatching 0.8 clo +clo 0007633 MDA-MB-175-VII cell skos:exactMatch efo 0001208 MDAMB175VII semapv:UnspecifiedMatching 0.8 clo +clo 0007634 MDA-MB-231 cell skos:exactMatch cellosaurus CVCL_0062 MDA-MB-231 semapv:UnspecifiedMatching 0.8 clo +clo 0007636 MDA-MB-361 cell skos:exactMatch cellosaurus CVCL_0620 MDA-MB-361 semapv:UnspecifiedMatching 0.8 clo +clo 0007636 MDA-MB-361 cell skos:exactMatch efo 0001211 MDAMB361 semapv:UnspecifiedMatching 0.8 clo +clo 0007637 MDA-MB-415 cell skos:exactMatch cellosaurus CVCL_0621 MDA-MB-415 semapv:UnspecifiedMatching 0.8 clo +clo 0007637 MDA-MB-415 cell skos:exactMatch efo 0001212 MDAMB415 semapv:UnspecifiedMatching 0.8 clo +clo 0007640 MDA-MB-453 cell skos:exactMatch cellosaurus CVCL_0418 MDA-MB-453 semapv:UnspecifiedMatching 0.8 clo +clo 0007640 MDA-MB-453 cell skos:exactMatch efo 0001215 MDAMB453 semapv:UnspecifiedMatching 0.8 clo +clo 0007641 MDA-MB-468 cell skos:exactMatch cellosaurus CVCL_0419 MDA-MB-468 semapv:UnspecifiedMatching 0.8 clo +clo 0007641 MDA-MB-468 cell skos:exactMatch efo 0001216 MDAMB468 semapv:UnspecifiedMatching 0.8 clo +clo 0007657 ME-180 cell skos:exactMatch cellosaurus CVCL_1401 ME-180 semapv:UnspecifiedMatching 0.8 clo +clo 0007668 MEG-01 cell skos:exactMatch cellosaurus CVCL_0425 MEG-01 semapv:UnspecifiedMatching 0.8 clo +clo 0007675 MEL-HO cell skos:exactMatch cellosaurus CVCL_1402 Mel Ho semapv:UnspecifiedMatching 0.8 clo +clo 0007676 MEL-JUSO cell skos:exactMatch cellosaurus CVCL_1403 Mel JuSo semapv:UnspecifiedMatching 0.8 clo +clo 0007677 MES-SA cell skos:exactMatch cellosaurus CVCL_1404 MES-SA semapv:UnspecifiedMatching 0.8 clo +clo 0007677 MES-SA cell skos:exactMatch efo 0002233 MESSA semapv:UnspecifiedMatching 0.8 clo +clo 0007692 MFE-280 cell skos:exactMatch cellosaurus CVCL_1405 MFE-280 semapv:UnspecifiedMatching 0.8 clo +clo 0007693 MFE-296 cell skos:exactMatch cellosaurus CVCL_1406 MFE-296 semapv:UnspecifiedMatching 0.8 clo +clo 0007695 MFM-223 cell skos:exactMatch cellosaurus CVCL_1408 MFM-223 semapv:UnspecifiedMatching 0.8 clo +clo 0007715 MHH-CALL-2 cell skos:exactMatch cellosaurus CVCL_1409 MHH-CALL-2 semapv:UnspecifiedMatching 0.8 clo +clo 0007718 MHH-ES-1 cell skos:exactMatch cellosaurus CVCL_1411 MHH-ES-1 semapv:UnspecifiedMatching 0.8 clo +clo 0007719 MHH-NB-11 cell skos:exactMatch cellosaurus CVCL_1412 MHH-NB-11 semapv:UnspecifiedMatching 0.8 clo +clo 0007720 MHH-PREB-1 cell skos:exactMatch cellosaurus CVCL_1413 MHH-PREB-1 semapv:UnspecifiedMatching 0.8 clo +clo 0007726 MIA PaCa-2 cell skos:exactMatch cellosaurus CVCL_0428 MIA PaCa-2 semapv:UnspecifiedMatching 0.8 clo +clo 0007726 MIA PaCa-2 cell skos:exactMatch efo 0002236 MIA Paca-2 semapv:UnspecifiedMatching 0.8 clo +clo 0007736 ML-2 cell skos:exactMatch cellosaurus CVCL_1418 ML-2 semapv:UnspecifiedMatching 0.8 clo +clo 0007736 ML-2 cell skos:exactMatch efo 0002238 ML2 semapv:UnspecifiedMatching 0.8 clo +clo 0007808 MN-60 cell skos:exactMatch cellosaurus CVCL_1421 MN-60 semapv:UnspecifiedMatching 0.8 clo +clo 0007817 MOG-G-CCM cell skos:exactMatch cellosaurus CVCL_2613 MOG-G-CCM semapv:UnspecifiedMatching 0.8 clo +clo 0007818 MOG-G-UVW cell 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0008877 RPMI-7951 cell skos:exactMatch cellosaurus CVCL_1666 RPMI-7951 semapv:UnspecifiedMatching 0.8 clo +clo 0008890 RT-112 cell skos:exactMatch cellosaurus CVCL_1670 RT-112 semapv:UnspecifiedMatching 0.8 clo +clo 0008902 RVH-421 cell skos:exactMatch cellosaurus CVCL_1672 RVH-421 semapv:UnspecifiedMatching 0.8 clo +clo 0008911 S-117 cell skos:exactMatch cellosaurus CVCL_1674 S-117 semapv:UnspecifiedMatching 0.8 clo +clo 0008947 Saos-2 cell skos:exactMatch cellosaurus CVCL_0548 SaOS-2 semapv:UnspecifiedMatching 0.8 clo +clo 0008965 SCaBER cell skos:exactMatch cellosaurus CVCL_3599 SCaBER semapv:UnspecifiedMatching 0.8 clo +clo 0008965 SCaBER cell skos:exactMatch efo 0002325 SCaBER semapv:UnspecifiedMatching 0.8 clo +clo 0008966 SCC-15 cell skos:exactMatch cellosaurus CVCL_1681 SCC-15 semapv:UnspecifiedMatching 0.8 clo +clo 0008967 SCC-25 cell skos:exactMatch cellosaurus CVCL_1682 SCC-25 semapv:UnspecifiedMatching 0.8 clo +clo 0008968 SCC-4 cell skos:exactMatch cellosaurus CVCL_1684 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0.8 clo +clo 0009042 SK-MEL-24 cell skos:exactMatch cellosaurus CVCL_0599 SK-MEL-24 semapv:UnspecifiedMatching 0.8 clo +clo 0009043 SK-MEL-28 cell skos:exactMatch cellosaurus CVCL_0526 SK-MEL-28 semapv:UnspecifiedMatching 0.8 clo +clo 0009045 SK-MEL-30 cell skos:exactMatch cellosaurus CVCL_0039 SK-MEL-30 semapv:UnspecifiedMatching 0.8 clo +clo 0009047 SK-MEL-5 cell skos:exactMatch cellosaurus CVCL_0527 SK-MEL-5 semapv:UnspecifiedMatching 0.8 clo +clo 0009048 SK-MES-1 cell skos:exactMatch cellosaurus CVCL_0630 SK-MES-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009050 SK-MM-2 cell skos:exactMatch cellosaurus CVCL_1699 SK-MM-2 semapv:UnspecifiedMatching 0.8 clo +clo 0009050 SK-MM-2 cell skos:exactMatch efo 0005458 SK-MM-2 semapv:UnspecifiedMatching 0.8 clo +clo 0009051 SK-N-AS cell skos:exactMatch cellosaurus CVCL_1700 SK-N-AS semapv:UnspecifiedMatching 0.8 clo +clo 0009051 SK-N-AS cell skos:exactMatch efo 0002859 SK-N-AS semapv:UnspecifiedMatching 0.8 clo +clo 0009054 SK-N-DZ cell 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semapv:UnspecifiedMatching 0.8 clo +clo 0009093 SNB-19 cell skos:exactMatch cellosaurus CVCL_0535 SNB-19 semapv:UnspecifiedMatching 0.8 clo +clo 0009093 SNB-19 cell skos:exactMatch efo 0002342 SNB19 semapv:UnspecifiedMatching 0.8 clo +clo 0009094 SNU-1 cell skos:exactMatch cellosaurus CVCL_0099 SNU-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009094 SNU-1 cell skos:exactMatch efo 0002343 SNU1 semapv:UnspecifiedMatching 0.8 clo +clo 0009095 SNU-16 cell skos:exactMatch cellosaurus CVCL_0076 SNU-16 semapv:UnspecifiedMatching 0.8 clo +clo 0009095 SNU-16 cell skos:exactMatch efo 0002344 SNU16 semapv:UnspecifiedMatching 0.8 clo +clo 0009097 SNU-387 cell skos:exactMatch cellosaurus CVCL_0250 SNU-387 semapv:UnspecifiedMatching 0.8 clo +clo 0009097 SNU-387 cell skos:exactMatch efo 0002346 SNU387 semapv:UnspecifiedMatching 0.8 clo +clo 0009098 SNU-398 cell skos:exactMatch cellosaurus CVCL_0077 SNU-398 semapv:UnspecifiedMatching 0.8 clo +clo 0009098 SNU-398 cell skos:exactMatch efo 0002347 SNU398 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CVCL_1710 SNU-C2B semapv:UnspecifiedMatching 0.8 clo +clo 0009126 SR cell skos:exactMatch cellosaurus CVCL_1711 SR semapv:UnspecifiedMatching 0.8 clo +clo 0009126 SR cell skos:exactMatch efo 0002352 SR semapv:UnspecifiedMatching 0.8 clo +clo 0009143 ST486 cell skos:exactMatch cellosaurus CVCL_1712 ST486 semapv:UnspecifiedMatching 0.8 clo +clo 0009143 ST486 cell skos:exactMatch efo 0002353 ST486 semapv:UnspecifiedMatching 0.8 clo +clo 0009160 SU-DHL-1 cell skos:exactMatch cellosaurus CVCL_0538 SU-DHL-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009160 SU-DHL-1 cell skos:exactMatch efo 0005461 SUDHL1 semapv:UnspecifiedMatching 0.8 clo +clo 0009161 SUP-B15 cell skos:exactMatch cellosaurus CVCL_0103 SUP-B15 semapv:UnspecifiedMatching 0.8 clo +clo 0009164 SUP-T1 cell skos:exactMatch cellosaurus CVCL_1714 SUP-T1 semapv:UnspecifiedMatching 0.8 clo +clo 0009182 SW 1088 cell skos:exactMatch cellosaurus CVCL_1715 SW1088 semapv:UnspecifiedMatching 0.8 clo +clo 0009182 SW 1088 cell skos:exactMatch efo 0002358 SW1088 semapv:UnspecifiedMatching 0.8 clo +clo 0009190 SW 1573 cell skos:exactMatch cellosaurus CVCL_1720 SW1573 semapv:UnspecifiedMatching 0.8 clo +clo 0009190 SW 1573 cell skos:exactMatch efo 0002363 SW1573 semapv:UnspecifiedMatching 0.8 clo +clo 0009191 SW 1783 cell skos:exactMatch cellosaurus CVCL_1722 SW1783 semapv:UnspecifiedMatching 0.8 clo +clo 0009191 SW 1783 cell skos:exactMatch efo 0002364 SW1783 semapv:UnspecifiedMatching 0.8 clo +clo 0009194 SW 48 cell skos:exactMatch cellosaurus CVCL_1723 SW1990 semapv:UnspecifiedMatching 0.8 clo +clo 0009194 SW 48 cell skos:exactMatch efo 0002365 SW1990 semapv:UnspecifiedMatching 0.8 clo +clo 0009199 SW 780 cell skos:exactMatch cellosaurus CVCL_1728 SW780 semapv:UnspecifiedMatching 0.8 clo +clo 0009199 SW 780 cell skos:exactMatch efo 0002371 SW780 semapv:UnspecifiedMatching 0.8 clo +clo 0009202 SW 900 cell skos:exactMatch cellosaurus CVCL_1731 SW900 semapv:UnspecifiedMatching 0.8 clo +clo 0009202 SW 900 cell skos:exactMatch efo 0002374 SW900 semapv:UnspecifiedMatching 0.8 clo +clo 0009213 SW-1710 cell skos:exactMatch cellosaurus CVCL_1721 SW1710 semapv:UnspecifiedMatching 0.8 clo +clo 0009215 SW403 cell skos:exactMatch cellosaurus CVCL_0545 SW403 semapv:UnspecifiedMatching 0.8 clo +clo 0009221 SW620 cell skos:exactMatch cellosaurus CVCL_0547 SW620 semapv:UnspecifiedMatching 0.8 clo +clo 0009221 SW620 cell skos:exactMatch efo 0002368 SW620 semapv:UnspecifiedMatching 0.8 clo +clo 0009223 SW756 cell skos:exactMatch cellosaurus CVCL_1727 SW756 semapv:UnspecifiedMatching 0.8 clo +clo 0009223 SW756 cell skos:exactMatch efo 0002370 SW756 semapv:UnspecifiedMatching 0.8 clo +clo 0009224 SW837 cell skos:exactMatch cellosaurus CVCL_1729 SW837 semapv:UnspecifiedMatching 0.8 clo +clo 0009224 SW837 cell skos:exactMatch efo 0002372 SW837 semapv:UnspecifiedMatching 0.8 clo +clo 0009242 T2 (174 x CEM.T2) cell skos:exactMatch cellosaurus CVCL_2211 T2 semapv:UnspecifiedMatching 0.8 clo +clo 0009254 T84 cell skos:exactMatch cellosaurus CVCL_0555 T84 semapv:UnspecifiedMatching 0.8 clo +clo 0009254 T84 cell skos:exactMatch efo 0002084 T84 semapv:UnspecifiedMatching 0.8 clo +clo 0009258 T98G cell skos:exactMatch cellosaurus CVCL_0556 T98G semapv:UnspecifiedMatching 0.8 clo +clo 0009258 T98G cell skos:exactMatch efo 0002085 T98G semapv:UnspecifiedMatching 0.8 clo +clo 0009326 TF-1 cell skos:exactMatch cellosaurus CVCL_0559 TF-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009348 THP-1 cell skos:exactMatch cellosaurus CVCL_0006 THP-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009348 THP-1 cell skos:exactMatch efo 0001253 THP-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009421 TT cell skos:exactMatch cellosaurus CVCL_1774 TT semapv:UnspecifiedMatching 0.8 clo +clo 0009421 TT cell skos:exactMatch efo 0002382 TT semapv:UnspecifiedMatching 0.8 clo +clo 0009447 TUR cell skos:exactMatch cellosaurus CVCL_1775 TUR semapv:UnspecifiedMatching 0.8 clo +clo 0009454 U-2 OS cell skos:exactMatch cellosaurus CVCL_0042 U2OS semapv:UnspecifiedMatching 0.8 clo +clo 0009454 U-2 OS cell skos:exactMatch efo 0002869 U2OS semapv:UnspecifiedMatching 0.8 clo +clo 0009458 U266B1 cell skos:exactMatch cellosaurus CVCL_0566 U266B1 semapv:UnspecifiedMatching 0.8 clo +clo 0009462 U-698-M cell skos:exactMatch cellosaurus CVCL_0017 U-698-M semapv:UnspecifiedMatching 0.8 clo +clo 0009464 U-87 MG cell skos:exactMatch cellosaurus CVCL_0022 U-87MG ATCC semapv:UnspecifiedMatching 0.8 clo +clo 0009465 U-937 cell skos:exactMatch cellosaurus CVCL_0007 U-937 semapv:UnspecifiedMatching 0.8 clo +clo 0009465 U-937 cell skos:exactMatch efo 0001257 U937 semapv:UnspecifiedMatching 0.8 clo +clo 0009467 UACC-812 cell skos:exactMatch cellosaurus CVCL_1781 UACC-812 semapv:UnspecifiedMatching 0.8 clo +clo 0009467 UACC-812 cell skos:exactMatch efo 0001258 UACC812 semapv:UnspecifiedMatching 0.8 clo +clo 0009468 UACC-893 cell skos:exactMatch cellosaurus CVCL_1782 UACC-893 semapv:UnspecifiedMatching 0.8 clo +clo 0009468 UACC-893 cell skos:exactMatch efo 0002385 UACC893 semapv:UnspecifiedMatching 0.8 clo +clo 0009483 UMC-11 cell skos:exactMatch cellosaurus CVCL_1784 UMC-11 semapv:UnspecifiedMatching 0.8 clo +clo 0009483 UMC-11 cell skos:exactMatch efo 0002386 UMC11 semapv:UnspecifiedMatching 0.8 clo +clo 0009487 UM-UC-3 cell skos:exactMatch cellosaurus CVCL_1783 UM-UC-3 semapv:UnspecifiedMatching 0.8 clo +clo 0009509 VA-ES-BJ cell skos:exactMatch cellosaurus CVCL_1785 VA-ES-BJ semapv:UnspecifiedMatching 0.8 clo +clo 0009600 WiDr cell skos:exactMatch cellosaurus CVCL_2760 WiDr semapv:UnspecifiedMatching 0.8 clo +clo 0009600 WiDr cell skos:exactMatch efo 0002389 WIDR semapv:UnspecifiedMatching 0.8 clo +clo 0009613 WM-115 cell skos:exactMatch cellosaurus CVCL_0040 WM115 semapv:UnspecifiedMatching 0.8 clo +clo 0009613 WM-115 cell skos:exactMatch efo 0002390 WM115 semapv:UnspecifiedMatching 0.8 clo +clo 0009636 WSU-NHL cell skos:exactMatch cellosaurus CVCL_1793 WSU-NHL semapv:UnspecifiedMatching 0.8 clo +clo 0009711 YAPC cell skos:exactMatch cellosaurus CVCL_1794 YAPC semapv:UnspecifiedMatching 0.8 clo +clo 0009718 YT cell skos:exactMatch cellosaurus CVCL_1797 YT semapv:UnspecifiedMatching 0.8 clo +clo 0009727 ZR-75-1 cell skos:exactMatch cellosaurus CVCL_0588 ZR-75-1 semapv:UnspecifiedMatching 0.8 clo +clo 0009727 ZR-75-1 cell skos:exactMatch efo 0001262 ZR751 semapv:UnspecifiedMatching 0.8 clo +clo 0009728 ZR-75-30 cell skos:exactMatch cellosaurus CVCL_1661 ZR-75-30 semapv:UnspecifiedMatching 0.8 clo +clo 0009728 ZR-75-30 cell skos:exactMatch efo 0001263 ZR7530 semapv:UnspecifiedMatching 0.8 clo +clo 0025503 GM00232 cell skos:exactMatch cellosaurus CVCL_Y965 GM00232 semapv:UnspecifiedMatching 0.8 clo +clo 0037201 RMA cell skos:exactMatch cellosaurus CVCL_J385 RMA semapv:UnspecifiedMatching 0.8 clo +clo 0037201 RMA cell skos:exactMatch obi OBI:1110038 RMA cell line semapv:UnspecifiedMatching 0.8 clo +clo 0037202 JY cell skos:exactMatch cellosaurus CVCL_0108 JY semapv:UnspecifiedMatching 0.8 clo +clo 0037203 MM.1S cell skos:exactMatch cellosaurus CVCL_8792 MM1.S semapv:UnspecifiedMatching 0.8 clo +clo 0037204 LSCC-RP9 cell skos:exactMatch cellosaurus CVCL_T444 LSCC-RP9 semapv:UnspecifiedMatching 0.8 clo +clo 0037205 UCI 107 cell skos:exactMatch cellosaurus CVCL_5381 UCI 107 semapv:UnspecifiedMatching 0.8 clo +clo 0037206 UCI 101 cell skos:exactMatch cellosaurus CVCL_5380 UCI 101 semapv:UnspecifiedMatching 0.8 clo +clo 0037214 RS-11846 cell skos:exactMatch cellosaurus CVCL_E048 RS11846 semapv:UnspecifiedMatching 0.8 clo +clo 0037219 HeLa-MAGI-CCR5 skos:exactMatch cellosaurus CVCL_D260 HeLa-MAGI-CCR5 semapv:UnspecifiedMatching 0.8 clo +clo 0037231 ECC-1 cell skos:exactMatch cellosaurus CVCL_7260 ECC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0037238 HEK293-T-REx cell skos:exactMatch bto BTO:0005238 T-REx 293 cell semapv:UnspecifiedMatching 0.8 clo +clo 0037238 HEK293-T-REx cell skos:exactMatch cellosaurus CVCL_D585 T-REx-293 semapv:UnspecifiedMatching 0.8 clo +clo 0037240 MCF10A-Er-Src cell skos:exactMatch cellosaurus CVCL_N805 MCF10A-Er-Src semapv:UnspecifiedMatching 0.8 clo +clo 0037242 2B4 cell skos:exactMatch bto BTO:0005682 2B4-T cell semapv:UnspecifiedMatching 0.8 clo +clo 0037252 CEM.NKR-CCR5 cell skos:exactMatch cellosaurus CVCL_X623 CEM.NKR-CCR5 semapv:UnspecifiedMatching 0.8 clo +clo 0037256 HBL-1 cell skos:exactMatch bto BTO:0002522 HBL-1 cell semapv:UnspecifiedMatching 0.8 clo +clo 0037256 HBL-1 cell skos:exactMatch cellosaurus CVCL_4213 HBL-1 [Human diffuse large B-cell lymphoma] semapv:UnspecifiedMatching 0.8 clo +clo 0037257 HMC-1-8 cell skos:exactMatch cellosaurus CVCL_2949 HMC-1-8 semapv:UnspecifiedMatching 0.8 clo +clo 0037268 RAW-Blue cell skos:exactMatch cellosaurus CVCL_X594 RAW-Blue semapv:UnspecifiedMatching 0.8 clo +clo 0037269 S16 cell skos:exactMatch bto BTO:0002937 S-16 cell semapv:UnspecifiedMatching 0.8 clo +clo 0037269 S16 cell skos:exactMatch cellosaurus CVCL_B072 S16 semapv:UnspecifiedMatching 0.8 clo +clo 0037272 TMD8 cell skos:exactMatch cellosaurus CVCL_A442 TMD8 semapv:UnspecifiedMatching 0.8 clo +clo 0037282 CL-34 cell skos:exactMatch cellosaurus CVCL_1980 CL-34 semapv:UnspecifiedMatching 0.8 clo +clo 0037282 CL-34 cell skos:exactMatch efo 0006369 CL-34 semapv:UnspecifiedMatching 0.8 clo +clo 0037283 SNU-1040 cell skos:exactMatch cellosaurus CVCL_5003 SNU-1040 semapv:UnspecifiedMatching 0.8 clo +clo 0037284 SNU-C4 cell skos:exactMatch cellosaurus CVCL_5111 SNU-C4 semapv:UnspecifiedMatching 0.8 clo +clo 0037285 SNU-C5 cell skos:exactMatch cellosaurus CVCL_5112 SNU-C5 semapv:UnspecifiedMatching 0.8 clo +clo 0037286 HEC-108 cell skos:exactMatch cellosaurus CVCL_2923 HEC-108 semapv:UnspecifiedMatching 0.8 clo +clo 0037288 COV644 cell skos:exactMatch efo 0006386 COV644 semapv:UnspecifiedMatching 0.8 clo +clo 0037293 OV7 cell skos:exactMatch efo 0006459 OV7 semapv:UnspecifiedMatching 0.8 clo +clo 0037297 RMUG-S cell skos:exactMatch efo 0006747 RMUG-S semapv:UnspecifiedMatching 0.8 clo +clo 0037337 BIHi001-A cell skos:exactMatch cellosaurus CVCL_IT54 BIHi001-A semapv:UnspecifiedMatching 0.8 clo +clo 0037342 EDi008-B skos:exactMatch cellosaurus CVCL_LE56 EDi008-B semapv:UnspecifiedMatching 0.8 clo +clo 0037384 E11 [mouse] cell skos:exactMatch cellosaurus CVCL_5737 E11 semapv:UnspecifiedMatching 0.8 clo +clo 0037385 MPC-1 cell skos:exactMatch cellosaurus CVCL_AS86 MPC-1 semapv:UnspecifiedMatching 0.8 clo +clo 0037386 MPC-5 cell skos:exactMatch cellosaurus CVCL_AS87 MPC-5 semapv:UnspecifiedMatching 0.8 clo +clo 0037387 MPC-8 cell skos:exactMatch cellosaurus CVCL_AS88 MPC-8 semapv:UnspecifiedMatching 0.8 clo +clo 0037388 SVI cell skos:exactMatch cellosaurus CVCL_5943 SVI semapv:UnspecifiedMatching 0.8 clo +clo 0037389 2DNA1D7 cell skos:exactMatch cellosaurus CVCL_XF89 2DNA1D7 semapv:UnspecifiedMatching 0.8 clo +clo 0037390 CIHP-1 cell skos:exactMatch cellosaurus CVCL_W186 CIHP-1 semapv:UnspecifiedMatching 0.8 clo +clo 0037391 hAKPC-P cell skos:exactMatch cellosaurus CVCL_YP01 hAKPC-P semapv:UnspecifiedMatching 0.8 clo +clo 0037392 HGVEC.SV1 cell skos:exactMatch cellosaurus CVCL_WW27 HGVEC.SV1 semapv:UnspecifiedMatching 0.8 clo +clo 0037393 HGVEC.SV1A4 cell skos:exactMatch cellosaurus CVCL_WW28 HGVEC.SV1A4 semapv:UnspecifiedMatching 0.8 clo +clo 0037394 HUPEC 001 G0/G0 cell skos:exactMatch cellosaurus CVCL_B0C8 HUPEC 001 G0/G0 semapv:UnspecifiedMatching 0.8 clo +clo 0037395 HUPEC 002 FSGS G0/G0 cell skos:exactMatch cellosaurus CVCL_B0D0 HUPEC 002 FSGS G0/G0 semapv:UnspecifiedMatching 0.8 clo +clo 0037396 HUPEC 003 FSGS G0/G0 cell skos:exactMatch cellosaurus CVCL_B0C9 HUPEC 003 FSGS G0/G0 semapv:UnspecifiedMatching 0.8 clo +clo 0037397 HUPEC 005 FSGS G1/G2 cell skos:exactMatch cellosaurus CVCL_B0CA HUPEC 005 FSGS G1/G2 semapv:UnspecifiedMatching 0.8 clo +clo 0037398 STBCi028-A cell skos:exactMatch cellosaurus CVCL_RB91 STBCi028-A semapv:UnspecifiedMatching 0.8 clo +clo 0037399 STBCi321-A cell skos:exactMatch cellosaurus CVCL_ZX54 STBCi321-A semapv:UnspecifiedMatching 0.8 clo +clo 0037420 STBCi322-A cell skos:exactMatch cellosaurus CVCL_ZX55 STBCi322-A semapv:UnspecifiedMatching 0.8 clo +clo 0050018 RCB1196 cell skos:exactMatch cellosaurus CVCL_1770 TGBC24TKB semapv:UnspecifiedMatching 0.8 clo +clo 0050019 RCB1129 cell skos:exactMatch cellosaurus CVCL_1769 TGBC1TKB semapv:UnspecifiedMatching 0.8 clo +clo 0050026 RCB0439 cell skos:exactMatch cellosaurus CVCL_1372 LC-1F semapv:UnspecifiedMatching 0.8 clo +clo 0050026 RCB0439 cell skos:exactMatch efo 0002827 LC-1F semapv:UnspecifiedMatching 0.8 clo +clo 0050064 RCB1970 cell skos:exactMatch cellosaurus CVCL_1377 LK-2 semapv:UnspecifiedMatching 0.8 clo +clo 0050064 RCB1970 cell skos:exactMatch efo 0003141 LK-2 semapv:UnspecifiedMatching 0.8 clo +clo 0050075 RCB0554 cell skos:exactMatch cellosaurus CVCL_1302 IA-LM semapv:UnspecifiedMatching 0.8 clo +clo 0050077 RCB1316 cell skos:exactMatch cellosaurus CVCL_1149 CTB-1 semapv:UnspecifiedMatching 0.8 clo +clo 0050084 RCB0749 cell skos:exactMatch cellosaurus CVCL_1407 MFH-ino semapv:UnspecifiedMatching 0.8 clo +clo 0050099 RCB2104 cell skos:exactMatch cellosaurus CVCL_1297 HuO-3N1 semapv:UnspecifiedMatching 0.8 clo +clo 0050117 RCB0803 cell skos:exactMatch cellosaurus CVCL_1450 NBsusSR semapv:UnspecifiedMatching 0.8 clo +clo 0050145 RCB1952 cell skos:exactMatch cellosaurus CVCL_1686 SCCH-26 semapv:UnspecifiedMatching 0.8 clo +clo 0050263 RCB0480 cell skos:exactMatch cellosaurus CVCL_1448 NB69 semapv:UnspecifiedMatching 0.8 clo +clo 0050267 RCB2108 cell skos:exactMatch cellosaurus CVCL_1605 NH-12 semapv:UnspecifiedMatching 0.8 clo +clo 0050626 RCB0778 cell skos:exactMatch cellosaurus CVCL_1151 CW-2 semapv:UnspecifiedMatching 0.8 clo +clo 0050634 RCB0763 cell skos:exactMatch cellosaurus CVCL_1231 GI-1 semapv:UnspecifiedMatching 0.8 clo +clo 0050680 RCB0736 cell skos:exactMatch cellosaurus CVCL_1172 DJM-1 semapv:UnspecifiedMatching 0.8 clo +clo 0050789 RCB1939 cell skos:exactMatch cellosaurus CVCL_3082 NUGC-4 semapv:UnspecifiedMatching 0.8 clo +clo 0050793 RCB0555 cell skos:exactMatch cellosaurus CVCL_1228 GCIY semapv:UnspecifiedMatching 0.8 clo +clo 0050796 RCB0983 cell skos:exactMatch cellosaurus CVCL_1188 ECC10 semapv:UnspecifiedMatching 0.8 clo +clo 0050801 RCB1148 cell skos:exactMatch cellosaurus CVCL_1768 TGBC11TKB semapv:UnspecifiedMatching 0.8 clo +clo 0050807 RCB1009 cell skos:exactMatch cellosaurus CVCL_1189 ECC12 semapv:UnspecifiedMatching 0.8 clo +clo 0050812 RCB1032 cell skos:exactMatch cellosaurus CVCL_1610 NOS-1 [Human osteosarcoma] semapv:UnspecifiedMatching 0.8 clo +clo 0050889 RCB0735 cell skos:exactMatch cellosaurus CVCL_1626 OS-RC-2 semapv:UnspecifiedMatching 0.8 clo +clo 0050890 RCB1151 cell skos:exactMatch cellosaurus CVCL_1647 RCC10RGB semapv:UnspecifiedMatching 0.8 clo +clo 0050923 RCB1892 cell skos:exactMatch cellosaurus CVCL_1704 SKG-IIIa semapv:UnspecifiedMatching 0.8 clo +clo 0050939 RCB0753 cell skos:exactMatch cellosaurus CVCL_1623 OMC-1 [Human cervical carcinoma] semapv:UnspecifiedMatching 0.8 clo +clo 0050976 RCB0540 cell skos:exactMatch cellosaurus CVCL_1242 HAL-01 semapv:UnspecifiedMatching 0.8 clo +clo 0050981 RCB1182 cell skos:exactMatch cellosaurus CVCL_1236 GR-ST semapv:UnspecifiedMatching 0.8 clo +clo 0050985 RCB1440 cell skos:exactMatch cellosaurus CVCL_1073 ATN-1 semapv:UnspecifiedMatching 0.8 clo +clo 0050994 RCB1936 cell skos:exactMatch cellosaurus CVCL_2792 MOLT-4F semapv:UnspecifiedMatching 0.8 clo +clo 0051369 RCB1894 cell skos:exactMatch cellosaurus CVCL_1759 TE-1 semapv:UnspecifiedMatching 0.8 clo +clo 0051370 RCB1951 cell skos:exactMatch cellosaurus CVCL_1763 TE-15 semapv:UnspecifiedMatching 0.8 clo +clo 0051371 RCB2098 cell skos:exactMatch cellosaurus CVCL_1766 TE-8 semapv:UnspecifiedMatching 0.8 clo +clo 0051372 RCB2099 cell skos:exactMatch cellosaurus CVCL_1760 TE-10 semapv:UnspecifiedMatching 0.8 clo +clo 0051373 RCB2100 cell skos:exactMatch cellosaurus CVCL_1761 TE-11 semapv:UnspecifiedMatching 0.8 clo +clo 0051375 RCB1949 cell skos:exactMatch cellosaurus CVCL_1764 TE-5 semapv:UnspecifiedMatching 0.8 clo +clo 0051376 RCB1950 cell skos:exactMatch cellosaurus CVCL_1765 TE-6 semapv:UnspecifiedMatching 0.8 clo +clo 0051378 RCB0774 cell skos:exactMatch cellosaurus CVCL_1187 EC-GI-10 semapv:UnspecifiedMatching 0.8 clo +clo 0051379 RCB1988 cell skos:exactMatch cellosaurus CVCL_1767 TE-9 semapv:UnspecifiedMatching 0.8 clo +clo 0051380 RCB1976 cell skos:exactMatch cellosaurus CVCL_1102 Ca9-22 semapv:UnspecifiedMatching 0.8 clo +clo 0051383 RCB1945 cell skos:exactMatch cellosaurus CVCL_1287 HSC-2 semapv:UnspecifiedMatching 0.8 clo +clo 0051391 RCB0489 cell skos:exactMatch cellosaurus CVCL_1604 NEC8 semapv:UnspecifiedMatching 0.8 clo +clo 0051398 RCB0982 cell skos:exactMatch cellosaurus CVCL_1190 ECC4 semapv:UnspecifiedMatching 0.8 clo +clo 0051454 RCB1154 cell skos:exactMatch cellosaurus CVCL_0375 KGN semapv:UnspecifiedMatching 0.8 clo +clo 0051547 RCB2084 cell skos:exactMatch cellosaurus CVCL_1736 TALL-1 [Human adult T-ALL] semapv:UnspecifiedMatching 0.8 clo +clo 0051567 RCB1902 cell skos:exactMatch cellosaurus CVCL_1289 HSC-4 semapv:UnspecifiedMatching 0.8 clo +clo 0051568 RCB1974 cell skos:exactMatch cellosaurus CVCL_1675 SAS semapv:UnspecifiedMatching 0.8 clo +clo 0051569 RCB1975 cell skos:exactMatch cellosaurus CVCL_1288 HSC-3 semapv:UnspecifiedMatching 0.8 clo +clo 0051609 RCB0881 cell skos:exactMatch cellosaurus CVCL_1621 OCUB-M semapv:UnspecifiedMatching 0.8 clo doid DOID:0050041 Astrakhan spotted fever skos:exactMatch umls C0549160 North Asian Tick Typhus semapv:LexicalMatching 0.5555555555555556 https://github.com/biomappings/biomappings/blob/f293d0/scripts/generate_doid_mappings.py doid DOID:0050042 Indian tick typhus skos:exactMatch umls C0343768 India tick typhus semapv:LexicalMatching 0.5555555555555556 https://github.com/biomappings/biomappings/blob/f293d0/scripts/generate_doid_mappings.py doid DOID:0050134 cutaneous mycosis skos:exactMatch umls C0011630 Dermatomycoses semapv:LexicalMatching 0.5555555555555556 https://github.com/biomappings/biomappings/blob/f293d0/scripts/generate_doid_mappings.py diff --git a/src/biomappings/templates/home.html b/src/biomappings/templates/home.html index f79b7621..1ebbf648 100644 --- a/src/biomappings/templates/home.html +++ b/src/biomappings/templates/home.html @@ -1,7 +1,7 @@ {% extends "base.html" %} -{% import "bootstrap/form.html" as wtf %} -{% import "bootstrap/utils.html" as util %} +{% import "bootstrap4/form.html" as wtf %} +{% import "bootstrap4/utils.html" as util %} {% set remaining_rows = controller.count_predictions(query=query, source_query=source_query, target_query=target_query, prefix=prefix, same_text=same_text, provenance=provenance) %}