try to systematically update data in biothings.ncats.io APIs

[andrewsu]

Many APIs haven't been updated since first creation. For example, https://biothings.ncats.io/go_bp, https://biothings.ncats.io/go_cc, and https://biothings.ncats.io/go_mf haven't been updated since 2020. We should try to systematically go through our existing APIs and see where updates are available and easily applied (i.e., no data format changes).

Ideally, we can have this done before our soon-to-be-submitted grant proposal is reviewed in ~September.

EDIT: Sorry, just realized I should probably have created this issue in https://github.com/biothings/pending.api/issues.. Feel free to recreate it over there if helpful.

[colleenXu]

Related to this? biothings/pending.api#25 (comment) and the "On updating what we already have" section of this comment (this list is incomplete and outdated).

[colleenXu]

@everaldorodrigo @andrewsu @newgene

Perhaps an issue for Everaldo to work on

[newgene]

@everaldorodrigo this issue in general means we should set auto-build schedule for those pending.api data sources which are regularly updated and have relatively stable parsers. This does not means auto release, which we still want to trigger manually.

[everaldorodrigo]

The following data sources were configured to have auto-build:

• DISEASES
• TISSUES
• cell_ontology
• chebi
• clinicaltrials_gov
• dois
• ebi_gene2phenotype
• fda_drugs
• gwascatalog
• hpo
• ncit
• phewas
• uberon
• ufeno_ontology