From d50c704511f74aba347016804a29eb26a0f463f1 Mon Sep 17 00:00:00 2001 From: Alli Black Date: Mon, 10 Jul 2017 09:33:42 -0700 Subject: [PATCH] restructure and rename output directory. --- {output_data => output}/consensus-genomes/README.md | 0 .../VI1-minion-miseq-comparison-aln.fasta | 0 .../VI4-minion-miseq-comparison-aln.fasta | 0 .../consensus-genomes/ZIKA_USVI_good.fasta | 0 .../consensus-genomes/ZIKA_USVI_partial.fasta | 0 .../consensus-genomes/ZIKA_USVI_poor.fasta | 0 {output_data => output}/depth-coverage/README.md | 0 .../usvi-library1/Coverage-Overlap-NB01-NB07.png | Bin .../usvi-library1/Coverage-Overlap-NB02-NB08.png | Bin .../usvi-library1/Coverage-Overlap-NB03-NB09.png | Bin .../usvi-library1/Coverage-Overlap-NB04-NB10.png | Bin .../usvi-library1/Coverage-Overlap-NB05-NB11.png | Bin .../usvi-library1/Coverage-Overlap-NB06-NB12.png | Bin .../usvi-library3/Coverage-Overlap-NB01-NB07.png | Bin .../usvi-library3/Coverage-Overlap-NB02-NB08.png | Bin .../usvi-library3/Coverage-Overlap-NB03-NB09.png | Bin .../usvi-library3/Coverage-Overlap-NB04-NB10.png | Bin .../usvi-library3/Coverage-Overlap-NB05-NB11.png | Bin .../usvi-library3/Coverage-Overlap-NB06-NB12.png | Bin .../depth-coverage/refs/ZikaReferenceGenome.fasta | 0 .../refs/ZikaReferenceGenome.fasta.amb | 0 .../refs/ZikaReferenceGenome.fasta.ann | 0 .../refs/ZikaReferenceGenome.fasta.bwt | Bin .../refs/ZikaReferenceGenome.fasta.pac | Bin .../refs/ZikaReferenceGenome.fasta.sa | Bin 25 files changed, 0 insertions(+), 0 deletions(-) rename {output_data => output}/consensus-genomes/README.md (100%) rename {output_data => output}/consensus-genomes/VI1-minion-miseq-comparison-aln.fasta (100%) rename {output_data => output}/consensus-genomes/VI4-minion-miseq-comparison-aln.fasta (100%) rename {output_data => output}/consensus-genomes/ZIKA_USVI_good.fasta (100%) rename {output_data => output}/consensus-genomes/ZIKA_USVI_partial.fasta (100%) rename {output_data => output}/consensus-genomes/ZIKA_USVI_poor.fasta (100%) rename {output_data => output}/depth-coverage/README.md (100%) rename {output_data => output}/depth-coverage/figures/usvi-library1/Coverage-Overlap-NB01-NB07.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library1/Coverage-Overlap-NB02-NB08.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library1/Coverage-Overlap-NB03-NB09.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library1/Coverage-Overlap-NB04-NB10.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library1/Coverage-Overlap-NB05-NB11.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library1/Coverage-Overlap-NB06-NB12.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library3/Coverage-Overlap-NB01-NB07.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library3/Coverage-Overlap-NB02-NB08.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library3/Coverage-Overlap-NB03-NB09.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library3/Coverage-Overlap-NB04-NB10.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library3/Coverage-Overlap-NB05-NB11.png (100%) rename {output_data => output}/depth-coverage/figures/usvi-library3/Coverage-Overlap-NB06-NB12.png (100%) rename {output_data => output}/depth-coverage/refs/ZikaReferenceGenome.fasta (100%) rename {output_data => output}/depth-coverage/refs/ZikaReferenceGenome.fasta.amb (100%) rename {output_data => output}/depth-coverage/refs/ZikaReferenceGenome.fasta.ann (100%) rename {output_data => output}/depth-coverage/refs/ZikaReferenceGenome.fasta.bwt (100%) rename {output_data => output}/depth-coverage/refs/ZikaReferenceGenome.fasta.pac (100%) rename {output_data => output}/depth-coverage/refs/ZikaReferenceGenome.fasta.sa (100%) diff --git a/output_data/consensus-genomes/README.md 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