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Input fastq file #120

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CaroB-M opened this issue Oct 20, 2023 · 0 comments
Open

Input fastq file #120

CaroB-M opened this issue Oct 20, 2023 · 0 comments
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enhancement

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@CaroB-M
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CaroB-M commented Oct 20, 2023

We are starting a very large sequencing project and would like to use MATAM to perform taxonomic assignment of samples.
I see that the input file is a recombined fastq file. Wouldn't it be possible to give both fastq files (read1 and read2) to avoid manipulating files and storing additional fastq files?
Thanks a lot
Caroline
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