From 2bc788712c73ac384562190d30dabbb84fdf85d4 Mon Sep 17 00:00:00 2001 From: Huseyin Kir <73784267+hkir-dev@users.noreply.github.com> Date: Wed, 2 Oct 2024 09:29:27 +0100 Subject: [PATCH 1/3] Update dhbao.yml --- config/ontology/dhbao.yml | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/config/ontology/dhbao.yml b/config/ontology/dhbao.yml index e5c81e2..2e5ad93 100644 --- a/config/ontology/dhbao.yml +++ b/config/ontology/dhbao.yml @@ -19,6 +19,13 @@ base_redirect: https://github.com/brain-bican/developing_human_brain_atlas_ontol entries: +# OLS resolution for DHBA Terms +- regex: ^/ontology/dhbao/DHBA_(\d+)$ + replacement: https://www.ebi.ac.uk/ols4/ontologies/dhba/classes/https%253A%252F%252Fpurl.brain-bican.org%252Fontology%252Fdhbao%252FDHBA_$1 + tests: + - from: /dhbao/DHBA_11218 + to: https://www.ebi.ac.uk/ols4/ontologies/dhba/classes/https%253A%252F%252Fpurl.brain-bican.org%252Fontology%252Fdhbao%252FDHBA_11218 + # https://purl.brain-bican.org/ontology/dhbao/dhbao-base.owl - exact: /dhbao-base.owl replacement: https://raw.githubusercontent.com/brain-bican/developing_human_brain_atlas_ontology/main/dhbao-base.owl From cb238b90732fbe85ded33f9be033c366b6314754 Mon Sep 17 00:00:00 2001 From: Huseyin Kir <73784267+hkir-dev@users.noreply.github.com> Date: Wed, 2 Oct 2024 09:59:18 +0100 Subject: [PATCH 2/3] Update dhbao.yml --- config/ontology/dhbao.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/config/ontology/dhbao.yml b/config/ontology/dhbao.yml index 2e5ad93..65d4111 100644 --- a/config/ontology/dhbao.yml +++ b/config/ontology/dhbao.yml @@ -11,7 +11,7 @@ products: - dhbao.obo: https://raw.githubusercontent.com/brain-bican/developing_human_brain_atlas_ontology/main/dhbao.obo - dhbao.json: https://raw.githubusercontent.com/brain-bican/developing_human_brain_atlas_ontology/main/dhbao.obo -term_browser: ols +term_browser: custom example_terms: - DHBA_0000000 From ca3c01c4a88b15d7dcec665271e3acdc49dacec4 Mon Sep 17 00:00:00 2001 From: Huseyin Kir <73784267+hkir-dev@users.noreply.github.com> Date: Wed, 2 Oct 2024 10:07:20 +0100 Subject: [PATCH 3/3] Update dhbao.yml --- config/ontology/dhbao.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/config/ontology/dhbao.yml b/config/ontology/dhbao.yml index 65d4111..5ecb6c3 100644 --- a/config/ontology/dhbao.yml +++ b/config/ontology/dhbao.yml @@ -21,10 +21,10 @@ entries: # OLS resolution for DHBA Terms - regex: ^/ontology/dhbao/DHBA_(\d+)$ - replacement: https://www.ebi.ac.uk/ols4/ontologies/dhba/classes/https%253A%252F%252Fpurl.brain-bican.org%252Fontology%252Fdhbao%252FDHBA_$1 + replacement: https://www.ebi.ac.uk/ols4/ontologies/dhba/terms/https%253A%252F%252Fpurl.brain-bican.org%252Fontology%252Fdhbao%252FDHBA_$1 tests: - from: /dhbao/DHBA_11218 - to: https://www.ebi.ac.uk/ols4/ontologies/dhba/classes/https%253A%252F%252Fpurl.brain-bican.org%252Fontology%252Fdhbao%252FDHBA_11218 + to: https://www.ebi.ac.uk/ols4/ontologies/dhba/terms/https%253A%252F%252Fpurl.brain-bican.org%252Fontology%252Fdhbao%252FDHBA_11218 # https://purl.brain-bican.org/ontology/dhbao/dhbao-base.owl - exact: /dhbao-base.owl