From a549a6a0b647df19edcca13510310f2c9e5e9f02 Mon Sep 17 00:00:00 2001
From: Igor Tatarnikov <igor.tatarnikov@gmail.com>
Date: Mon, 13 Jan 2025 16:22:27 +0000
Subject: [PATCH] Fixed failing tests
---
tests/test_unit/test_stitching_widget.py | 17 ++++++++++-------
1 file changed, 10 insertions(+), 7 deletions(-)
diff --git a/tests/test_unit/test_stitching_widget.py b/tests/test_unit/test_stitching_widget.py
index a475ca7..2a66e21 100644
--- a/tests/test_unit/test_stitching_widget.py
+++ b/tests/test_unit/test_stitching_widget.py
@@ -376,15 +376,15 @@ def test_on_stitch_button_clicked(
stitching_widget = stitching_widget_with_mosaic
stitching_widget.imagej_path = test_constants["MOCK_IMAGEJ_EXEC_PATH"]
- mock_stitch_function = mocker.patch(
- "brainglobe_stitch.stitching_widget.ImageMosaic.stitch",
+ mock_create_worker = mocker.patch(
+ "brainglobe_stitch.stitching_widget.create_worker",
autospec=True,
)
stitching_widget._on_stitch_button_clicked()
- mock_stitch_function.assert_called_once_with(
- stitching_widget.image_mosaic,
+ mock_create_worker.assert_called_once_with(
+ stitching_widget_with_mosaic.image_mosaic.stitch,
stitching_widget.imagej_path,
resolution_level=2,
selected_channel="",
@@ -484,11 +484,14 @@ def test_on_fuse_button_clicked(
autospec=True,
)
- stitching_widget.output_file_name_field.setText(file_name)
+ output_path = stitching_widget.working_directory / file_name
+ stitching_widget.select_output_path_text_field.setText(str(output_path))
stitching_widget._on_fuse_button_clicked()
- mock_fuse.assert_called_once_with(stitching_widget.image_mosaic, file_name)
+ mock_fuse.assert_called_once_with(
+ stitching_widget.image_mosaic, output_path, normalise_intensity=False
+ )
mock_display_info.assert_called_once_with(
stitching_widget,
"Info",
@@ -527,7 +530,7 @@ def test_on_fuse_button_clicked_wrong_suffix(
):
stitching_widget = stitching_widget_with_mosaic
- stitching_widget.output_file_name_field.setText("fused_image.tif")
+ stitching_widget.select_output_path_text_field.setText("fused_image.tif")
error_message = "Output file name should end with .zarr, .h5"
mock_show_warning = mocker.patch(