ECG R-wave and P-wave localization in paper:
@InProceedings{Abrishami2018,
author = {H. {Abrishami} and M. {Campbell} and C. {Han} and R. {Czosek} and X. {Zhou}},
title = {P-{QRS}-T localization in {ECG} using deep learning},
booktitle = {Proc. IEEE EMBS Int. Conf. Biomedical Health Informatics (BHI)},
year = {2018},
pages = {210--213},
month = mar,
doi = {10.1109/BHI.2018.8333406}
}
Since the code of this paper is not open, I implemented the code according this paper with keras
framework.
Data preprocessed in MATLAB. Download data files from https://www.physionet.org/content/qtdb/1.0.0/
with download_QTDB.m
. PC will get xxxann.mat
for Y and xxxdata.mat
for X.
For input data to keras conveniently, Segmentor.m
will segment all recording into complexes and position of P-wave and R-wave is also saved in segmentors.mat
.
if you load segmentor.mat
into matlab. You will get segs
with 96863 by 300 and anns
with dimention of 96863 by 2 in workspace. That mean there are 96863 complexes with length of 300 sampling points.
ann[:,1]
presents position of P-wave. ann[:,2]
presents position of R-wave. More detail can be found in paper.
for fully-connected net usage:
python ./paper_models_codes/denseNet_P_R_localization.py
for 1D CNN usage:
python ./paper_models_codes/ECGNet.py
for 1D CNN with dropout usage:
python ./paper_models_codes/ECGNet_Dropout.py