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Unknown error in making summary abundance table #538

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tfaitova1 opened this issue Mar 4, 2024 · 0 comments
Open

Unknown error in making summary abundance table #538

tfaitova1 opened this issue Mar 4, 2024 · 0 comments

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@tfaitova1
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Hi,
How should one know what went wrong in the summary abundance table making ?

....

----- summarize salmon files... -----

"SRR15051205.quant.counts",
"SRR15051206.quant.counts",
"SRR15051207.quant.counts",
"SRR15051208.quant.counts",
"SRR15051209.quant.counts",
"SRR15051210.quant.counts",
"SRR15051211.quant.counts",
"SRR15051212.quant.counts",
"SRR15051269.quant.counts",
"SRR15051270.quant.counts",
"SRR15051271.quant.counts",
"SRR15051272.quant.counts",
"SRR15051273.quant.counts",
"SRR15051274.quant.counts",
"SRR15051276.quant.counts",
"SRR15051277.quant.counts",
"SRR15051278.quant.counts",
"SRR15051279.quant.counts",
"SRR15051281.quant.counts",
"SRR15051282.quant.counts",
"SRR15051283.quant.counts",
"SRR15051284.quant.counts",
"SRR15051285.quant.counts",
"SRR15051286.quant.counts",
"SRR15051287.quant.counts",
"SRR15051288.quant.counts",
"SRR15051289.quant.counts",
"SRR15051333.quant.counts",
"SRR15051334.quant.counts",
"SRR15051335.quant.counts",
"SRR15051336.quant.counts",
"SRR15051337.quant.counts",
"SRR15051338.quant.counts",
"SRR15051339.quant.counts",
"SRR15051340.quant.counts",
"SRR15051341.quant.counts",
"SRR15051342.quant.counts",
"SRR15051343.quant.counts",
"SRR15051345.quant.counts",
"SRR15051346.quant.counts",
"SRR15051347.quant.counts",
"SRR15051348.quant.counts",
"SRR15051349.quant.counts",
"SRR15051350.quant.counts",
"SRR15051351.quant.counts",
"SRR15051352.quant.counts",
"SRR15051353.quant.counts",
"SRR15051355.quant.counts",
"SRR15051393.quant.counts",
"SRR15051394.quant.counts",
"SRR15051395.quant.counts",
"SRR15051396.quant.counts",
"SRR15051397.quant.counts",
"SRR15051398.quant.counts",
"SRR15051399.quant.counts",
"SRR15051400.quant.counts",
"SRR15051401.quant.counts",
"SRR15051402.quant.counts",
"SRR15051403.quant.counts",
"SRR15051404.quant.counts",
"SRR15051405.quant.counts",
"SRR15051406.quant.counts",
"SRR15051407.quant.counts",
"SRR15051409.quant.counts",
"SRR15051410.quant.counts",
"SRR15051411.quant.counts",
"SRR15051412.quant.counts",
"SRR15051413.quant.counts",
"SRR15051414.quant.counts",
"SRR15051415.quant.counts",
"SRR15051416.quant.counts",
"SRR15051417.quant.counts",
"SRR15051418.quant.counts",
"SRR15051419.quant.counts",
"SRR15051421.quant.counts",
"SRR15051422.quant.counts",
"SRR15051425.quant.counts",
"SRR15051426.quant.counts"

########################################################################################################################

EXTRACTING AVERAGE ABUNDANCE OF EACH BIN

########################################################################################################################


----- There were 78 samples detected. Making abundance table! -----


***** something went wrong with making summary abundance table. Exiting... *****


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