From b2dcd178ab22132d0def8728aa92b8b2be455c84 Mon Sep 17 00:00:00 2001 From: "Zhaoyuan (Ryan) Fu" Date: Wed, 16 Oct 2024 16:37:59 -0400 Subject: [PATCH] Update clickhouse.sql --- src/main/resources/db-scripts/clickhouse/clickhouse.sql | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/main/resources/db-scripts/clickhouse/clickhouse.sql b/src/main/resources/db-scripts/clickhouse/clickhouse.sql index 29fc2375295..f0980375e54 100644 --- a/src/main/resources/db-scripts/clickhouse/clickhouse.sql +++ b/src/main/resources/db-scripts/clickhouse/clickhouse.sql @@ -372,7 +372,7 @@ FROM ge.stable_id as entity_stable_id, gp.datatype as datatype, gp.patient_level as patient_level, - arrayMap(x -> (x = '' ? NULL : x), splitByString(',', assumeNotNull(substring(ga.values, 1, -1)))) AS alteration_value, + arrayMap(x -> (x = '' ? NULL : x), splitByString(',', assumeNotNull(substring(ga.values, 1, -1)))) AS value, arrayMap(x -> (x = '' ? NULL : toInt64(x)), splitByString(',', assumeNotNull(substring(gps.ordered_sample_list, 1, -1)))) AS sample_id FROM genetic_profile gp JOIN genetic_profile_samples gps ON gp.genetic_profile_id = gps.genetic_profile_id