Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Improvements to the internal data curation automation tool #51

Open
6 of 7 tasks
rmadupuri opened this issue May 1, 2023 · 0 comments
Open
6 of 7 tasks

Improvements to the internal data curation automation tool #51

rmadupuri opened this issue May 1, 2023 · 0 comments

Comments

@rmadupuri
Copy link
Collaborator

rmadupuri commented May 1, 2023

  • Create case_lists folder if it doesn't exist when generating case lists
  • mismatch of stable ids in meta_cna and gene panel matrix.
  • Improve user logging
  • create a dedicated folder to write the new datasets on the server
  • TMB generation reference folder on server
  • Improve the readme documentation
  • Add end validation tests
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant