From adb40e60609524a395cdf98a6b531b157fb90e82 Mon Sep 17 00:00:00 2001 From: sbabyanusha Date: Tue, 8 Aug 2023 19:25:54 -0400 Subject: [PATCH] zero base correction MAF --- public/pan_origimed_2020/data_mutations.txt | 3 +++ public/pan_origimed_2020/data_mutations_extended.txt | 3 --- .../{meta_mutations_extended.txt => meta_mutations.txt} | 2 +- public/ucec_ccr_cfdna_msk_2022/data_mutations.txt | 4 ++-- 4 files changed, 6 insertions(+), 6 deletions(-) create mode 100644 public/pan_origimed_2020/data_mutations.txt delete mode 100644 public/pan_origimed_2020/data_mutations_extended.txt rename public/pan_origimed_2020/{meta_mutations_extended.txt => meta_mutations.txt} (87%) diff --git a/public/pan_origimed_2020/data_mutations.txt b/public/pan_origimed_2020/data_mutations.txt new file mode 100644 index 0000000000..41b071109f --- /dev/null +++ b/public/pan_origimed_2020/data_mutations.txt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:562ff68ed7e1312230ea05008a6508827f7a9ce807bb39433805c007adf6b2a4 +size 24115503 diff --git a/public/pan_origimed_2020/data_mutations_extended.txt b/public/pan_origimed_2020/data_mutations_extended.txt deleted file mode 100644 index fd64a7dfad..0000000000 --- a/public/pan_origimed_2020/data_mutations_extended.txt +++ /dev/null @@ -1,3 +0,0 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:3525815725ecc2e623a3eb5236341b38378ce5d2497e0d34435311b2a2cf4e3f -size 23429574 diff --git a/public/pan_origimed_2020/meta_mutations_extended.txt b/public/pan_origimed_2020/meta_mutations.txt similarity index 87% rename from public/pan_origimed_2020/meta_mutations_extended.txt rename to public/pan_origimed_2020/meta_mutations.txt index b5212b5eca..6a4cfdea9f 100755 --- a/public/pan_origimed_2020/meta_mutations_extended.txt +++ b/public/pan_origimed_2020/meta_mutations.txt @@ -5,4 +5,4 @@ stable_id: mutations show_profile_in_analysis_tab: TRUE profile_name: Mutations profile_description: Targeted sequencing of various tumor types via Cancer Sequencing YS panel (CSYS) on Illumina HiSeq sequencers. -data_filename: data_mutations_extended.txt +data_filename: data_mutations.txt diff --git a/public/ucec_ccr_cfdna_msk_2022/data_mutations.txt b/public/ucec_ccr_cfdna_msk_2022/data_mutations.txt index af8a487b0b..844eeaf7c8 100644 --- a/public/ucec_ccr_cfdna_msk_2022/data_mutations.txt +++ b/public/ucec_ccr_cfdna_msk_2022/data_mutations.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:a5432a981c67e581afb42bcedf9551a813bc47b3c3d38f39bd5591569f049320 -size 115211 +oid sha256:c2fa507b8086dca74832d89aa752c155d18efd6760c60499c9343fc36760e580 +size 133463