From 9aeb5796fab301b2f71636c5990afb7ecda2dc8a Mon Sep 17 00:00:00 2001 From: Ino de Bruijn Date: Tue, 27 Feb 2024 16:46:58 -0500 Subject: [PATCH] update cbioportal-core in validateStudies CI Related to https://github.com/cBioPortal/datahub/issues/2013 --- .circleci/validate_changed_studies.sh | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.circleci/validate_changed_studies.sh b/.circleci/validate_changed_studies.sh index 83516b1834..aa5c285d86 100755 --- a/.circleci/validate_changed_studies.sh +++ b/.circleci/validate_changed_studies.sh @@ -56,13 +56,13 @@ if [[ $num_studies > 0 ]]; then # fi # append the first study if [ "$validation_command" = "" ] ; then - validation_command="($HOME/cbioportal/core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study" + validation_command="($HOME/cbioportal-core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study" else # run each validation individually in the background if [ $mod = 0 ] ; then - validation_command="${validation_command}) & ($HOME/cbioportal/core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study" + validation_command="${validation_command}) & ($HOME/cbioportal-core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study" else - validation_command="${validation_command} ; $HOME/cbioportal/core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study" + validation_command="${validation_command} ; $HOME/cbioportal-core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study" fi fi done