From dfeee342a8d72f27f025f7d9470c5092c9037d59 Mon Sep 17 00:00:00 2001 From: sbabyanusha Date: Mon, 11 Dec 2023 16:43:10 -0500 Subject: [PATCH 1/2] review fixes --- public/bladder_msk_2023/data_clinical_patient.txt | 2 +- public/bladder_msk_2023/data_clinical_sample.txt | 4 ++-- public/bladder_msk_2023/meta_study.txt | 2 +- public/bm_nsclc_mskcc_2023/data_clinical_sample.txt | 4 ++-- public/bm_nsclc_mskcc_2023/meta_study.txt | 4 ++-- public/cervix_msk_2023/data_clinical_sample.txt | 4 ++-- public/cervix_msk_2023/meta_study.txt | 2 +- 7 files changed, 11 insertions(+), 11 deletions(-) diff --git a/public/bladder_msk_2023/data_clinical_patient.txt b/public/bladder_msk_2023/data_clinical_patient.txt index 03c07a3a96..4db451df5b 100644 --- a/public/bladder_msk_2023/data_clinical_patient.txt +++ b/public/bladder_msk_2023/data_clinical_patient.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:b7131eb0c9bfb9d9d628b57f05578a58207c5c7ad2d0995bf91e89a3e991cdea +oid sha256:681614b625044bb72822203911e603e7cf7a752880c668c97faaabc1f1c73da0 size 28728 diff --git a/public/bladder_msk_2023/data_clinical_sample.txt b/public/bladder_msk_2023/data_clinical_sample.txt index b191d636b1..a8d5c59682 100644 --- a/public/bladder_msk_2023/data_clinical_sample.txt +++ b/public/bladder_msk_2023/data_clinical_sample.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:9811fc9b806bf9526c8c778ae795ae5b8444d05bf72b02a81a29816762235a20 -size 76380 +oid sha256:a5f560e3ddff7343120c5ce145455e4a70599c4a1ba615781e73c65c3a1024f0 +size 75735 diff --git a/public/bladder_msk_2023/meta_study.txt b/public/bladder_msk_2023/meta_study.txt index f2e266c39a..09730cf74f 100644 --- a/public/bladder_msk_2023/meta_study.txt +++ b/public/bladder_msk_2023/meta_study.txt @@ -1,6 +1,6 @@ cancer_study_identifier: bladder_msk_2023 type_of_cancer: bladder name: Bladder Cancer (MSK, Clin Cancer Research 2023) -description: Targeted Sequencing of 526 bladder tumors and their matched normals via MSK-IMPACT. +description: Targeted sequencing of 526 bladder tumors and their matched normals via MSK-IMPACT. pmid: 37682528 citation: Guercio et al. Clin Cancer Res. 2023 \ No newline at end of file diff --git a/public/bm_nsclc_mskcc_2023/data_clinical_sample.txt b/public/bm_nsclc_mskcc_2023/data_clinical_sample.txt index aba13bebd0..9e4dbd87aa 100644 --- a/public/bm_nsclc_mskcc_2023/data_clinical_sample.txt +++ b/public/bm_nsclc_mskcc_2023/data_clinical_sample.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:d7aa00d27dadc94330208e56b78cfb0c12405da12d8076d9f1698c122be01a14 -size 86103 +oid sha256:fce4cddfce5753480d10df0d0860239cd69b5f5cf64950eb28fa1c7558f9aae7 +size 86025 diff --git a/public/bm_nsclc_mskcc_2023/meta_study.txt b/public/bm_nsclc_mskcc_2023/meta_study.txt index 953703bac4..bc48b252b5 100644 --- a/public/bm_nsclc_mskcc_2023/meta_study.txt +++ b/public/bm_nsclc_mskcc_2023/meta_study.txt @@ -1,6 +1,6 @@ type_of_cancer: nsclc cancer_study_identifier: bm_nsclc_mskcc_2023 -name: BM NSCLC (MSK, 2023) -description: Targeted sequencing of 322 BM NSCLC tumor/normal pairs via MSK-IMPACT. +name: BM NSCLC (MSK, Nat Commun 2023) +description: Targeted sequencing of 322 NSCLC brain metastasis and their matched normals via MSK-IMPACT. pmid: 37591896 citation: Anna et al. Nat Commun 2023 \ No newline at end of file diff --git a/public/cervix_msk_2023/data_clinical_sample.txt b/public/cervix_msk_2023/data_clinical_sample.txt index 54ec6cf521..ed14661df7 100644 --- a/public/cervix_msk_2023/data_clinical_sample.txt +++ b/public/cervix_msk_2023/data_clinical_sample.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:58fe00e15483a5242f20045e3fec8e856a0a26964ae31b36ccc006aaeca9fd07 -size 33186 +oid sha256:ad69cce773753d3d2a155bee40e109f8f9fe2e1a8172ee3ba7a3f1caeeb23654 +size 32906 diff --git a/public/cervix_msk_2023/meta_study.txt b/public/cervix_msk_2023/meta_study.txt index a7bbb92b35..e295baaf5c 100644 --- a/public/cervix_msk_2023/meta_study.txt +++ b/public/cervix_msk_2023/meta_study.txt @@ -1,6 +1,6 @@ cancer_study_identifier: cervix_msk_2023 type_of_cancer: cervix name: Cervical Cancer (MSK, Clin Cancer Res 2023) -description: Targeted Sequencing of 177 cervical tumors and their matched normal samples via MSK-IMPACT. +description: Targeted sequencing of 177 cervical tumors and their matched normal samples via MSK-IMPACT. pmid: 37643132 citation: Friedman et al. Clin Cancer Res 2023 \ No newline at end of file From 060c449f2fe1759d044e7441bbc3b8e7b0d5c3d0 Mon Sep 17 00:00:00 2001 From: sbabyanusha Date: Mon, 11 Dec 2023 16:49:41 -0500 Subject: [PATCH 2/2] file format fix --- public/bladder_msk_2023/data_clinical_sample.txt | 4 ++-- public/cervix_msk_2023/data_clinical_sample.txt | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/public/bladder_msk_2023/data_clinical_sample.txt b/public/bladder_msk_2023/data_clinical_sample.txt index a8d5c59682..6e0f277039 100644 --- a/public/bladder_msk_2023/data_clinical_sample.txt +++ b/public/bladder_msk_2023/data_clinical_sample.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:a5f560e3ddff7343120c5ce145455e4a70599c4a1ba615781e73c65c3a1024f0 -size 75735 +oid sha256:5af118bba9deb7037c70d9e27b39f9b998b566e0a8a7d63740eead1bd7315ccd +size 75201 diff --git a/public/cervix_msk_2023/data_clinical_sample.txt b/public/cervix_msk_2023/data_clinical_sample.txt index ed14661df7..cb9243d6a3 100644 --- a/public/cervix_msk_2023/data_clinical_sample.txt +++ b/public/cervix_msk_2023/data_clinical_sample.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:ad69cce773753d3d2a155bee40e109f8f9fe2e1a8172ee3ba7a3f1caeeb23654 -size 32906 +oid sha256:30844bbd2b81bee57f2acca244aaf31aabe3717d0c2615f4334a7e3159cd8429 +size 32719