From 377913a516e08afb598b6c62bb49b5721555fcd1 Mon Sep 17 00:00:00 2001 From: sbabyanusha Date: Tue, 12 Sep 2023 16:33:17 -0400 Subject: [PATCH 1/5] Fix mutated events --- public/acc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/angs_painter_2020/data_mutations.txt | 4 ++-- public/bcc_unige_2016/data_mutations.txt | 4 ++-- public/blca_bcan_hcrn_2022/data_mutations.txt | 4 ++-- public/blca_msk_tcga_2020/data_mutations.txt | 4 ++-- public/blca_tcga_pub_2017/data_mutations.txt | 4 ++-- public/brain_cptac_2020/data_mutations.txt | 4 ++-- public/brca_cptac_2020/data_mutations.txt | 4 ++-- public/brca_igr_2015/data_mutations.txt | 4 ++-- public/brca_mbcproject_2022/data_mutations.txt | 4 ++-- public/brca_tcga_pub/data_mutations.txt | 4 ++-- public/brca_tcga_pub2015/data_mutations.txt | 4 ++-- public/cellline_ccle_broad/data_mutations.txt | 4 ++-- public/cesc_tcga/data_mutations.txt | 4 ++-- public/cesc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/coad_silu_2022/data_mutations.txt | 4 ++-- public/coadread_mskresistance_2022/data_mutations.txt | 4 ++-- public/coadread_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/coadread_tcga_pub/data_mutations.txt | 4 ++-- public/crc_apc_impact_2020/data_mutations.txt | 4 ++-- public/crc_eo_2020/data_mutations.txt | 4 ++-- public/cscc_ucsf_2021/data_mutations.txt | 4 ++-- public/dlbc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/esca_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/gbc_mskcc_2022/data_mutations.txt | 4 ++-- public/gbm_mayo_pdx_sarkaria_2019/data_mutations.txt | 4 ++-- public/hcc_inserm_fr_2015/data_mutations.txt | 4 ++-- public/hcc_meric_2021/data_mutations.txt | 4 ++-- public/hccihch_pku_2019/data_mutations.txt | 4 ++-- public/histiocytosis_cobi_msk_2019/data_mutations.txt | 4 ++-- public/kirc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/kirp_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/lgg_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/luad_broad/data_mutations.txt | 4 ++-- public/luad_mskcc_2023_met_organotropism/data_mutations.txt | 4 ++-- public/lusc_tcga_pub/data_mutations.txt | 4 ++-- public/mbl_dkfz_2017/data_mutations.txt | 4 ++-- public/mel_dfci_2019/data_mutations.txt | 4 ++-- public/mel_ucla_2016/data_mutations.txt | 4 ++-- public/meso_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/mixed_allen_2018/data_mutations.txt | 4 ++-- public/mixed_kunga_msk_2022/data_mutations.txt | 4 ++-- public/mixed_msk_tcga_2021/data_mutations.txt | 4 ++-- public/mixed_selpercatinib_2020/data_mutations.txt | 4 ++-- public/mng_utoronto_2021/data_mutations.txt | 4 ++-- public/mpcproject_broad_2021/data_mutations.txt | 4 ++-- public/mpnst_mskcc/data_mutations.txt | 4 ++-- public/msk_access_2021/data_mutations.txt | 4 ++-- public/nsclc_tracerx_2017/data_mutations.txt | 4 ++-- public/ov_tcga/data_mutations.txt | 4 ++-- public/paad_cptac_2021/data_mutations.txt | 4 ++-- public/paad_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/pancan_pcawg_2020/data_mutations.txt | 4 ++-- public/prad_eururol_2017/meta_mrna_seq_rpkm.txt | 4 ++-- public/prad_mcspc_mskcc_2020/data_mutations.txt | 4 ++-- public/prad_msk_stopsack_2021/data_mutations.txt | 4 ++-- public/prad_p1000/data_mutations.txt | 4 ++-- public/prad_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/rectal_msk_2022/data_mutations.txt | 4 ++-- public/sarc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/sarcoma_mskcc_2022/data_mutations.txt | 4 ++-- public/sclc_jhu/data_mutations.txt | 4 ++-- public/skcm_broad/data_mutations.txt | 4 ++-- public/skcm_dfci_2015/data_mutations.txt | 4 ++-- public/skcm_mskcc_2014/data_mutations.txt | 4 ++-- public/stad_oncosg_2018/data_mutations.txt | 4 ++-- public/thca_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/thym_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/ucs_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/vsc_cuk_2018/data_mutations.txt | 4 ++-- 70 files changed, 140 insertions(+), 140 deletions(-) mode change 100755 => 100644 public/mixed_selpercatinib_2020/data_mutations.txt diff --git a/public/acc_tcga_pan_can_atlas_2018/data_mutations.txt b/public/acc_tcga_pan_can_atlas_2018/data_mutations.txt index a857edff33..8840dbe7c1 100644 --- a/public/acc_tcga_pan_can_atlas_2018/data_mutations.txt +++ b/public/acc_tcga_pan_can_atlas_2018/data_mutations.txt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:3912bbe4b5cceac75eb3e4293f5061d2f7c2dc5bda55bcccb474acb337317d64 -size 12176450 +oid sha256:eb9f8d008aa0f44e7e45cbcfa3989d5621787c6907bc978e23a01848ced80290 +size 12174578 diff --git a/public/angs_painter_2020/data_mutations.txt b/public/angs_painter_2020/data_mutations.txt index 641aad140d..48dbe783eb 100644 --- a/public/angs_painter_2020/data_mutations.txt +++ 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2001 From: RAlhamad Date: Thu, 14 Sep 2023 12:40:53 -0400 Subject: [PATCH 3/5] Mutation fixes --- public/blca_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/brca_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/difg_glass_2019/data_mutations.txt | 4 ++-- public/gbm_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/hnsc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/lihc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/luad_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/lusc_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/ov_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/prostate_pcbm_swiss_2019/data_mutations.txt | 4 ++-- public/skcm_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/stad_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- public/ucec_tcga_pan_can_atlas_2018/data_mutations.txt | 4 ++-- 13 files changed, 26 insertions(+), 26 deletions(-) diff --git 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2023 12:18:46 -0400 Subject: [PATCH 4/5] mutated fix --- public/brca_bccrc/data_mutations.txt | 4 ++-- public/nbl_msk_2023/data_mutations.txt | 4 ++-- public/nccrcc_genentech_2014/data_mutations.txt | 4 ++-- public/nepc_wcm_2016/data_mutations.txt | 4 ++-- public/nhl_bcgsc_2013/data_mutations.txt | 4 ++-- public/npc_nusingapore/data_mutations.txt | 4 ++-- public/nsclc_ctdx_msk_2022/data_mutations.txt | 4 ++-- public/nsclc_mskcc_2018/data_mutations.txt | 4 ++-- public/odg_msk_2017/data_mutations.txt | 4 ++-- public/paad_icgc/data_mutations.txt | 4 ++-- public/paad_qcmg_uq_2016/data_mutations.txt | 4 ++-- public/paired_bladder_2022/data_mutations.txt | 4 ++-- public/pediatric_dkfz_2017/data_mutations.txt | 4 ++-- public/pptc_2019/data_mutations.txt | 4 ++-- public/prad_broad/data_mutations.txt | 4 ++-- public/prad_cpcg_2017/data_mutations.txt | 4 ++-- public/prad_su2c_2019/data_mutations.txt | 4 ++-- public/rbl_cfdna_msk_2020/data_mutations.txt | 4 ++-- 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