diff --git a/CHANGES.md b/CHANGES.md index 1fb2604..faf5f10 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -1,5 +1,11 @@ # CHANGES +## 1.16.0 + +* Pulls in cgpCaVEManPostProcessing 1.9.0 + * Edgecase fix for overlapping reads - cause +1 variant at WGS scale + * Major performance improvement (in post processing) + ## 1.15.3 * Build around CaVEMan core [1.14.1](https://github.com/cancerit/CaVEMan/releases/tag/1.14.0) @@ -24,7 +30,7 @@ ## 1.14.0 -* Created Docker file to build a containder for the wrapper. +* Created Docker file to build a containder for the wrapper. * Added quay.io badge for the image to the README. ## 1.13.14 diff --git a/Dockerfile b/Dockerfile index 8a0d974..e391ded 100644 --- a/Dockerfile +++ b/Dockerfile @@ -7,8 +7,7 @@ ENV VER_VCFTOOLS="0.1.16" ENV VER_CGPVCF="v2.2.1" ENV VER_CAVEMAN="1.14.1" ENV VER_BEDTOOLS="2.27.1" -ENV VER_CGPCAVEPOSTPROC="1.8.9" -ENV VER_CGPCAVEWRAP="1.15.3" +ENV VER_CGPCAVEPOSTPROC="1.9.0" RUN apt-get -yq update RUN apt-get install -yq --no-install-recommends \ @@ -43,7 +42,7 @@ FROM ubuntu:16.04 LABEL maintainer="cgphelp@sanger.ac.uk" \ uk.ac.sanger.cgp="Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute" \ - version="1.15.3" \ + version="1.16.0" \ description="cgpCaVEManWrapper docker" RUN apt-get -yq update diff --git a/lib/Sanger/CGP/Caveman.pm b/lib/Sanger/CGP/Caveman.pm index a621e66..9c9b766 100644 --- a/lib/Sanger/CGP/Caveman.pm +++ b/lib/Sanger/CGP/Caveman.pm @@ -26,6 +26,6 @@ package Sanger::CGP::Caveman; use strict; use Const::Fast qw(const); -our $VERSION = '1.15.3'; +our $VERSION = '1.16.0'; 1;