fCNV JSONDecoder error

[fpahernandez]

Using fCNV to read a .cnv profile:

import sys
import numpy as np
import seabird
from seabird.cnv import fCNV
Fic = DirHydro + DirABR + "Est11__SouthBahia.cnv"
profile = fCNV(Fic)

Error description:

Traceback (most recent call last):

File "/var/folders/s5/l4k15wz11tj840w0qyj2ksph0000gn/T/ipykernel_9928/2120108936.py", line 1, in
profile = fCNV(Fic)

File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/site-packages/seabird/cnv.py", line 574, in init
super(fCNV, self).init(text, defaults)

File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/site-packages/seabird/cnv.py", line 58, in init
self.rule, self.parsed = load_rule(self.raw_text)

File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/site-packages/seabird/utils.py", line 77, in load_rule
rule = json.loads(text.decode('utf-8'), encoding="utf-8")

File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/json/init.py", line 359, in loads
return cls(**kw).decode(s)

TypeError: JSONDecoder.init() got an unexpected keyword argument 'encoding'

USING:
MAcOS 12.6.1
Anaconda Navigator 2.3.2
cotede 0.23.7
seabird 0.11.5
python 3.10.6

[castelao]

Thanks for reporting that. You'll need to update to seabird-0.12 or later. You can do that with PIP or wait a few minutes for conda-forge to update itself. Cheers,

…

On Mon, Jun 19, 2023 at 4:48 AM fpahernandez ***@***.***> wrote: Using fCNV to read a .cnv profile: import sys import numpy as np import seabird from seabird.cnv import fCNV Fic = DirHydro + DirABR + "Est11__SouthBahia.cnv" profile = fCNV(Fic) Error description: Traceback (most recent call last): File "/var/folders/s5/l4k15wz11tj840w0qyj2ksph0000gn/T/ipykernel_9928/2120108936.py", line 1, in profile = fCNV(Fic) File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/site-packages/seabird/cnv.py", line 574, in *init* super(fCNV, self).*init*(text, defaults) File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/site-packages/seabird/cnv.py", line 58, in *init* self.rule, self.parsed = load_rule(self.raw_text) File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/site-packages/seabird/utils.py", line 77, in load_rule rule = json.loads(text.decode('utf-8'), encoding="utf-8") File "/Users/fhernandez/opt/anaconda3/envs/dev39/lib/python3.10/json/ *init*.py", line 359, in loads return cls(**kw).decode(s) TypeError: JSONDecoder.*init*() got an unexpected keyword argument 'encoding' USING: MAcOS 12.6.1 Anaconda Navigator 2.3.2 cotede 0.23.7 seabird 0.11.5 python 3.10.6 — Reply to this email directly, view it on GitHub <#72>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAOQXZKOSW3ODI6Y4KDXXITXMAVBDANCNFSM6AAAAAAZLYEKTE> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[fpahernandez]

Thanks a lot. I updated usind "conda update seabird" on my environnement. It works. By the way, my .cnv files do not contain lon/lat (they are recorded only onto the log doc from the sea campaign). Is there a way to update the cnv file with lon/lat data? Thanks again for your effort for the community.