0.4.1

Version 0.4.1

• [bugfix] recent versions of BioPython have deprecated functionality
  used by frameshift_deletions_checks (.position, nogap, wrappers)

0.4.0

• frameshift_deletions_checks: --chain option as alternative to running mafft
• packaging modernized

0.3.9

Bugfixes:

• frameshift_deletions_checks: fixes bugs in interactions between stop codons and indels
• aln2basecnt: avoid crashes on empty sequences (e.g.: after primer trimming with samtools)

0.3.8

• Multiple bug and deprecation fixes and updates in framshift reporting script
• Increased portability

0.3.7

What's Changed

• Save aligned consensus by @mcarrara-bioinfo in #15
• Add stop codons detection and reporting in the frameshift_deletions_check script by @mcarrara-bioinfo in #16

New Contributors

• @mcarrara-bioinfo made their first contribution in #15

Full Changelog: 0.3.6...0.3.7