From 1bee2ec47306d831c388ffd2b21760010b943797 Mon Sep 17 00:00:00 2001 From: lvreynoso Date: Wed, 6 Sep 2023 19:27:53 -0700 Subject: [PATCH] Fix select_all syntax --- workflows/amr/run.wdl | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflows/amr/run.wdl b/workflows/amr/run.wdl index 993a22211..85e280dfa 100644 --- a/workflows/amr/run.wdl +++ b/workflows/amr/run.wdl @@ -23,7 +23,7 @@ workflow amr { String s3_wd_uri = "" } if (defined(raw_reads_0)) { - Array[File]+ raw_reads = select_all(select_first([raw_reads_0]), select_first([raw_reads_1])) + Array[File]+ raw_reads = select_all([select_first([raw_reads_0]), select_first([raw_reads_1])]) call host_filter.czid_host_filter as host_filter_stage { input: