diff --git a/.infra/rdev/values.yaml b/.infra/rdev/values.yaml
index 2ad44ad17..47cd306f7 100644
--- a/.infra/rdev/values.yaml
+++ b/.infra/rdev/values.yaml
@@ -2,7 +2,7 @@ stack:
   services:
     explorer:
       image:
-        tag: sha-3940dd93
+        tag: sha-47925f47
       replicaCount: 1
       env:
         # env vars common to all deployment stages
diff --git a/client/package-lock.json b/client/package-lock.json
index 7d71df696..9bddc8f36 100644
--- a/client/package-lock.json
+++ b/client/package-lock.json
@@ -41,11 +41,14 @@
         "memoize-one": "^5.1.1",
         "openseadragon": "^4.1.1",
         "pako": "^2.0.3",
+        "re-resizable": "^6.10.1",
         "react": "^18.3.1",
         "react-async": "^10.0.1",
         "react-dom": "^18.3.1",
+        "react-draggable": "^4.4.5",
         "react-flip-toolkit": "^7.0.12",
         "react-icons": "^4.2.0",
+        "react-markdown": "^9.0.1",
         "react-redux": "^7.2.0",
         "redux": "^4.0.5",
         "redux-thunk": "^2.3.0",
@@ -53,7 +56,8 @@
         "regl": "^2.1.0",
         "sha1": "^1.1.1",
         "tinyqueue": "^2.0.3",
-        "whatwg-fetch": "^3.2.0"
+        "whatwg-fetch": "^3.2.0",
+        "zod": "^3.23.8"
       },
       "devDependencies": {
         "@babel/core": "^7.13.16",
@@ -212,41 +216,6 @@
         "tslib": "^2.6.2"
       }
     },
-    "node_modules/@aws-crypto/sha256-browser/node_modules/@smithy/is-array-buffer": {
-      "version": "2.2.0",
-      "resolved": "https://registry.npmjs.org/@smithy/is-array-buffer/-/is-array-buffer-2.2.0.tgz",
-      "integrity": "sha512-GGP3O9QFD24uGeAXYUjwSTXARoqpZykHadOmA8G5vfJPK0/DC67qa//0qvqrJzL1xc8WQWX7/yc7fwudjPHPhA==",
-      "dependencies": {
-        "tslib": "^2.6.2"
-      },
-      "engines": {
-        "node": ">=14.0.0"
-      }
-    },
-    "node_modules/@aws-crypto/sha256-browser/node_modules/@smithy/util-buffer-from": {
-      "version": "2.2.0",
-      "resolved": "https://registry.npmjs.org/@smithy/util-buffer-from/-/util-buffer-from-2.2.0.tgz",
-      "integrity": "sha512-IJdWBbTcMQ6DA0gdNhh/BwrLkDR+ADW5Kr1aZmd4k3DIF6ezMV4R2NIAmT08wQJ3yUK82thHWmC/TnK/wpMMIA==",
-      "dependencies": {
-        "@smithy/is-array-buffer": "^2.2.0",
-        "tslib": "^2.6.2"
-      },
-      "engines": {
-        "node": ">=14.0.0"
-      }
-    },
-    "node_modules/@aws-crypto/sha256-browser/node_modules/@smithy/util-utf8": {
-      "version": "2.3.0",
-      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-2.3.0.tgz",
-      "integrity": "sha512-R8Rdn8Hy72KKcebgLiv8jQcQkXoLMOGGv5uI1/k0l+snqkOzQ1R0ChUBCxWMlBsFMekWjq0wRudIweFs7sKT5A==",
-      "dependencies": {
-        "@smithy/util-buffer-from": "^2.2.0",
-        "tslib": "^2.6.2"
-      },
-      "engines": {
-        "node": ">=14.0.0"
-      }
-    },
     "node_modules/@aws-crypto/sha256-js": {
       "version": "5.2.0",
       "resolved": "https://registry.npmjs.org/@aws-crypto/sha256-js/-/sha256-js-5.2.0.tgz",
@@ -278,41 +247,6 @@
         "tslib": "^2.6.2"
       }
     },
-    "node_modules/@aws-crypto/util/node_modules/@smithy/is-array-buffer": {
-      "version": "2.2.0",
-      "resolved": "https://registry.npmjs.org/@smithy/is-array-buffer/-/is-array-buffer-2.2.0.tgz",
-      "integrity": "sha512-GGP3O9QFD24uGeAXYUjwSTXARoqpZykHadOmA8G5vfJPK0/DC67qa//0qvqrJzL1xc8WQWX7/yc7fwudjPHPhA==",
-      "dependencies": {
-        "tslib": "^2.6.2"
-      },
-      "engines": {
-        "node": ">=14.0.0"
-      }
-    },
-    "node_modules/@aws-crypto/util/node_modules/@smithy/util-buffer-from": {
-      "version": "2.2.0",
-      "resolved": "https://registry.npmjs.org/@smithy/util-buffer-from/-/util-buffer-from-2.2.0.tgz",
-      "integrity": "sha512-IJdWBbTcMQ6DA0gdNhh/BwrLkDR+ADW5Kr1aZmd4k3DIF6ezMV4R2NIAmT08wQJ3yUK82thHWmC/TnK/wpMMIA==",
-      "dependencies": {
-        "@smithy/is-array-buffer": "^2.2.0",
-        "tslib": "^2.6.2"
-      },
-      "engines": {
-        "node": ">=14.0.0"
-      }
-    },
-    "node_modules/@aws-crypto/util/node_modules/@smithy/util-utf8": {
-      "version": "2.3.0",
-      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-2.3.0.tgz",
-      "integrity": "sha512-R8Rdn8Hy72KKcebgLiv8jQcQkXoLMOGGv5uI1/k0l+snqkOzQ1R0ChUBCxWMlBsFMekWjq0wRudIweFs7sKT5A==",
-      "dependencies": {
-        "@smithy/util-buffer-from": "^2.2.0",
-        "tslib": "^2.6.2"
-      },
-      "engines": {
-        "node": ">=14.0.0"
-      }
-    },
     "node_modules/@aws-sdk/client-secrets-manager": {
       "version": "3.637.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/client-secrets-manager/-/client-secrets-manager-3.637.0.tgz",
@@ -365,6 +299,30 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/client-secrets-manager/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/client-secrets-manager/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/client-sso": {
       "version": "3.637.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/client-sso/-/client-sso-3.637.0.tgz",
@@ -465,6 +423,54 @@
         "@aws-sdk/client-sts": "^3.637.0"
       }
     },
+    "node_modules/@aws-sdk/client-sso-oidc/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/client-sso-oidc/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/client-sso/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/client-sso/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/client-sts": {
       "version": "3.637.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/client-sts/-/client-sts-3.637.0.tgz",
@@ -515,6 +521,30 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/client-sts/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/client-sts/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/core": {
       "version": "3.635.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/core/-/core-3.635.0.tgz",
@@ -535,6 +565,48 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/core/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/core/node_modules/@smithy/signature-v4": {
+      "version": "4.2.1",
+      "resolved": "https://registry.npmjs.org/@smithy/signature-v4/-/signature-v4-4.2.1.tgz",
+      "integrity": "sha512-NsV1jF4EvmO5wqmaSzlnTVetemBS3FZHdyc5CExbDljcyJCEEkJr8ANu2JvtNbVg/9MvKAWV44kTrGS+Pi4INg==",
+      "dependencies": {
+        "@smithy/is-array-buffer": "^3.0.0",
+        "@smithy/protocol-http": "^4.1.5",
+        "@smithy/types": "^3.6.0",
+        "@smithy/util-hex-encoding": "^3.0.0",
+        "@smithy/util-middleware": "^3.0.8",
+        "@smithy/util-uri-escape": "^3.0.0",
+        "@smithy/util-utf8": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@aws-sdk/core/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/credential-provider-env": {
       "version": "3.620.1",
       "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-env/-/credential-provider-env-3.620.1.tgz",
@@ -568,6 +640,18 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/credential-provider-http/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/credential-provider-ini": {
       "version": "3.637.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-ini/-/credential-provider-ini-3.637.0.tgz",
@@ -677,6 +761,18 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/middleware-host-header/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/middleware-logger": {
       "version": "3.609.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/middleware-logger/-/middleware-logger-3.609.0.tgz",
@@ -704,6 +800,18 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/middleware-recursion-detection/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/middleware-user-agent": {
       "version": "3.637.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/middleware-user-agent/-/middleware-user-agent-3.637.0.tgz",
@@ -719,6 +827,18 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@aws-sdk/middleware-user-agent/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@aws-sdk/region-config-resolver": {
       "version": "3.614.0",
       "resolved": "https://registry.npmjs.org/@aws-sdk/region-config-resolver/-/region-config-resolver-3.614.0.tgz",
@@ -6742,6 +6862,30 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@smithy/core/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
+    "node_modules/@smithy/core/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@smithy/credential-provider-imds": {
       "version": "3.2.0",
       "resolved": "https://registry.npmjs.org/@smithy/credential-provider-imds/-/credential-provider-imds-3.2.0.tgz",
@@ -6769,6 +6913,18 @@
         "tslib": "^2.6.2"
       }
     },
+    "node_modules/@smithy/fetch-http-handler/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
+      "integrity": "sha512-hsjtwpIemmCkm3ZV5fd/T0bPIugW1gJXwZ/hpuVubt2hEUApIoUTrf6qIdh9MAWlw0vjMrA1ztJLAwtNaZogvg==",
+      "dependencies": {
+        "@smithy/types": "^3.6.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@smithy/hash-node": {
       "version": "3.0.3",
       "resolved": "https://registry.npmjs.org/@smithy/hash-node/-/hash-node-3.0.3.tgz",
@@ -6783,6 +6939,18 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@smithy/hash-node/node_modules/@smithy/util-utf8": {
+      "version": "3.0.0",
+      "resolved": "https://registry.npmjs.org/@smithy/util-utf8/-/util-utf8-3.0.0.tgz",
+      "integrity": "sha512-rUeT12bxFnplYDe815GXbq/oixEGHfRFFtcTF3YdDi/JaENIM6aSYYLJydG83UNzLXeRI5K8abYd/8Sp/QM0kA==",
+      "dependencies": {
+        "@smithy/util-buffer-from": "^3.0.0",
+        "tslib": "^2.6.2"
+      },
+      "engines": {
+        "node": ">=16.0.0"
+      }
+    },
     "node_modules/@smithy/invalid-dependency": {
       "version": "3.0.3",
       "resolved": "https://registry.npmjs.org/@smithy/invalid-dependency/-/invalid-dependency-3.0.3.tgz",
@@ -6816,6 +6984,18 @@
         "node": ">=16.0.0"
       }
     },
+    "node_modules/@smithy/middleware-content-length/node_modules/@smithy/protocol-http": {
+      "version": "4.1.5",
+      "resolved": "https://registry.npmjs.org/@smithy/protocol-http/-/protocol-http-4.1.5.tgz",
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+      "resolved": "https://registry.npmjs.org/unist-util-visit/-/unist-util-visit-5.0.0.tgz",
+      "integrity": "sha512-MR04uvD+07cwl/yhVuVWAtw+3GOR/knlL55Nd/wAdblk27GCVt3lqpTivy/tkJcZoNPzTwS1Y+KMojlLDhoTzg==",
+      "dependencies": {
+        "@types/unist": "^3.0.0",
+        "unist-util-is": "^6.0.0",
+        "unist-util-visit-parents": "^6.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/react-markdown/node_modules/unist-util-visit-parents": {
+      "version": "6.0.1",
+      "resolved": "https://registry.npmjs.org/unist-util-visit-parents/-/unist-util-visit-parents-6.0.1.tgz",
+      "integrity": "sha512-L/PqWzfTP9lzzEa6CKs0k2nARxTdZduw3zyh8d2NVBnsyvHjSX4TWse388YrrQKbvI8w20fGjGlhgT96WwKykw==",
+      "dependencies": {
+        "@types/unist": "^3.0.0",
+        "unist-util-is": "^6.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
     "node_modules/react-popper": {
       "version": "2.3.0",
       "resolved": "https://registry.npmjs.org/react-popper/-/react-popper-2.3.0.tgz",
@@ -21788,6 +23112,37 @@
         "url": "https://opencollective.com/unified"
       }
     },
+    "node_modules/remark-parse": {
+      "version": "11.0.0",
+      "resolved": "https://registry.npmjs.org/remark-parse/-/remark-parse-11.0.0.tgz",
+      "integrity": "sha512-FCxlKLNGknS5ba/1lmpYijMUzX2esxW5xQqjWxw2eHFfS2MSdaHVINFmhjo+qN1WhZhNimq0dZATN9pH0IDrpA==",
+      "dependencies": {
+        "@types/mdast": "^4.0.0",
+        "mdast-util-from-markdown": "^2.0.0",
+        "micromark-util-types": "^2.0.0",
+        "unified": "^11.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/remark-rehype": {
+      "version": "11.1.1",
+      "resolved": "https://registry.npmjs.org/remark-rehype/-/remark-rehype-11.1.1.tgz",
+      "integrity": "sha512-g/osARvjkBXb6Wo0XvAeXQohVta8i84ACbenPpoSsxTOQH/Ae0/RGP4WZgnMH5pMLpsj4FG7OHmcIcXxpza8eQ==",
+      "dependencies": {
+        "@types/hast": "^3.0.0",
+        "@types/mdast": "^4.0.0",
+        "mdast-util-to-hast": "^13.0.0",
+        "unified": "^11.0.0",
+        "vfile": "^6.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
     "node_modules/remark-slug": {
       "version": "6.1.0",
       "resolved": "https://registry.npmjs.org/remark-slug/-/remark-slug-6.1.0.tgz",
@@ -22983,6 +24338,19 @@
         "url": "https://github.com/sponsors/ljharb"
       }
     },
+    "node_modules/stringify-entities": {
+      "version": "4.0.4",
+      "resolved": "https://registry.npmjs.org/stringify-entities/-/stringify-entities-4.0.4.tgz",
+      "integrity": "sha512-IwfBptatlO+QCJUo19AqvrPNqlVMpW9YEL2LIVY+Rpv2qsjCGxaDLNRgeGsQWJhfItebuJhsGSLjaBbNSQ+ieg==",
+      "dependencies": {
+        "character-entities-html4": "^2.0.0",
+        "character-entities-legacy": "^3.0.0"
+      },
+      "funding": {
+        "type": "github",
+        "url": "https://github.com/sponsors/wooorm"
+      }
+    },
     "node_modules/stringify-object": {
       "version": "3.3.0",
       "resolved": "https://registry.npmjs.org/stringify-object/-/stringify-object-3.3.0.tgz",
@@ -23094,6 +24462,14 @@
         "webpack": "^5.0.0"
       }
     },
+    "node_modules/style-to-object": {
+      "version": "1.0.8",
+      "resolved": "https://registry.npmjs.org/style-to-object/-/style-to-object-1.0.8.tgz",
+      "integrity": "sha512-xT47I/Eo0rwJmaXC4oilDGDWLohVhR6o/xAQcPQN8q6QBuZVL8qMYL85kLmST5cPjAorwvqIA4qXTRQoYHaL6g==",
+      "dependencies": {
+        "inline-style-parser": "0.2.4"
+      }
+    },
     "node_modules/stylehacks": {
       "version": "5.1.1",
       "resolved": "https://registry.npmjs.org/stylehacks/-/stylehacks-5.1.1.tgz",
@@ -23719,6 +25095,24 @@
       "integrity": "sha512-N3WMsuqV66lT30CrXNbEjx4GEwlow3v6rr4mCcv6prnfwhS01rkgyFdjPNBYd9br7LpXV1+Emh01fHnq2Gdgrw==",
       "dev": true
     },
+    "node_modules/trim-lines": {
+      "version": "3.0.1",
+      "resolved": "https://registry.npmjs.org/trim-lines/-/trim-lines-3.0.1.tgz",
+      "integrity": "sha512-kRj8B+YHZCc9kQYdWfJB2/oUl9rA99qbowYYBtr4ui4mZyAQ2JpvVBd/6U2YloATfqBhBTSMhTpgBHtU0Mf3Rg==",
+      "funding": {
+        "type": "github",
+        "url": "https://github.com/sponsors/wooorm"
+      }
+    },
+    "node_modules/trough": {
+      "version": "2.2.0",
+      "resolved": "https://registry.npmjs.org/trough/-/trough-2.2.0.tgz",
+      "integrity": "sha512-tmMpK00BjZiUyVyvrBK7knerNgmgvcV/KLVyuma/SC+TQN167GrMRciANTz09+k3zW8L8t60jWO1GpfkZdjTaw==",
+      "funding": {
+        "type": "github",
+        "url": "https://github.com/sponsors/wooorm"
+      }
+    },
     "node_modules/ts-dedent": {
       "version": "2.2.0",
       "resolved": "https://registry.npmjs.org/ts-dedent/-/ts-dedent-2.2.0.tgz",
@@ -24017,6 +25411,29 @@
         "url": "https://github.com/sponsors/sindresorhus"
       }
     },
+    "node_modules/unified": {
+      "version": "11.0.5",
+      "resolved": "https://registry.npmjs.org/unified/-/unified-11.0.5.tgz",
+      "integrity": "sha512-xKvGhPWw3k84Qjh8bI3ZeJjqnyadK+GEFtazSfZv/rKeTkTjOJho6mFqh2SM96iIcZokxiOpg78GazTSg8+KHA==",
+      "dependencies": {
+        "@types/unist": "^3.0.0",
+        "bail": "^2.0.0",
+        "devlop": "^1.0.0",
+        "extend": "^3.0.0",
+        "is-plain-obj": "^4.0.0",
+        "trough": "^2.0.0",
+        "vfile": "^6.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/unified/node_modules/@types/unist": {
+      "version": "3.0.3",
+      "resolved": "https://registry.npmjs.org/@types/unist/-/unist-3.0.3.tgz",
+      "integrity": "sha512-ko/gIFJRv177XgZsZcBwnqJN5x/Gien8qNOn0D5bQU/zAzVf9Zt3BlcUiLqhV9y4ARk0GbT3tnUiPNgnTXzc/Q=="
+    },
     "node_modules/unique-string": {
       "version": "3.0.0",
       "resolved": "https://registry.npmjs.org/unique-string/-/unique-string-3.0.0.tgz",
@@ -24042,6 +25459,40 @@
         "url": "https://opencollective.com/unified"
       }
     },
+    "node_modules/unist-util-position": {
+      "version": "5.0.0",
+      "resolved": "https://registry.npmjs.org/unist-util-position/-/unist-util-position-5.0.0.tgz",
+      "integrity": "sha512-fucsC7HjXvkB5R3kTCO7kUjRdrS0BJt3M/FPxmHMBOm8JQi2BsHAHFsy27E0EolP8rp0NzXsJ+jNPyDWvOJZPA==",
+      "dependencies": {
+        "@types/unist": "^3.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/unist-util-position/node_modules/@types/unist": {
+      "version": "3.0.3",
+      "resolved": "https://registry.npmjs.org/@types/unist/-/unist-3.0.3.tgz",
+      "integrity": "sha512-ko/gIFJRv177XgZsZcBwnqJN5x/Gien8qNOn0D5bQU/zAzVf9Zt3BlcUiLqhV9y4ARk0GbT3tnUiPNgnTXzc/Q=="
+    },
+    "node_modules/unist-util-stringify-position": {
+      "version": "4.0.0",
+      "resolved": "https://registry.npmjs.org/unist-util-stringify-position/-/unist-util-stringify-position-4.0.0.tgz",
+      "integrity": "sha512-0ASV06AAoKCDkS2+xw5RXJywruurpbC4JZSm7nr7MOt1ojAzvyyaO+UxZf18j8FCF6kmzCZKcAgN/yu2gm2XgQ==",
+      "dependencies": {
+        "@types/unist": "^3.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/unist-util-stringify-position/node_modules/@types/unist": {
+      "version": "3.0.3",
+      "resolved": "https://registry.npmjs.org/@types/unist/-/unist-3.0.3.tgz",
+      "integrity": "sha512-ko/gIFJRv177XgZsZcBwnqJN5x/Gien8qNOn0D5bQU/zAzVf9Zt3BlcUiLqhV9y4ARk0GbT3tnUiPNgnTXzc/Q=="
+    },
     "node_modules/unist-util-visit": {
       "version": "2.0.3",
       "resolved": "https://registry.npmjs.org/unist-util-visit/-/unist-util-visit-2.0.3.tgz",
@@ -24375,6 +25826,42 @@
         "node": ">= 0.8"
       }
     },
+    "node_modules/vfile": {
+      "version": "6.0.3",
+      "resolved": "https://registry.npmjs.org/vfile/-/vfile-6.0.3.tgz",
+      "integrity": "sha512-KzIbH/9tXat2u30jf+smMwFCsno4wHVdNmzFyL+T/L3UGqqk6JKfVqOFOZEpZSHADH1k40ab6NUIXZq422ov3Q==",
+      "dependencies": {
+        "@types/unist": "^3.0.0",
+        "vfile-message": "^4.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/vfile-message": {
+      "version": "4.0.2",
+      "resolved": "https://registry.npmjs.org/vfile-message/-/vfile-message-4.0.2.tgz",
+      "integrity": "sha512-jRDZ1IMLttGj41KcZvlrYAaI3CfqpLpfpf+Mfig13viT6NKvRzWZ+lXz0Y5D60w6uJIBAOGq9mSHf0gktF0duw==",
+      "dependencies": {
+        "@types/unist": "^3.0.0",
+        "unist-util-stringify-position": "^4.0.0"
+      },
+      "funding": {
+        "type": "opencollective",
+        "url": "https://opencollective.com/unified"
+      }
+    },
+    "node_modules/vfile-message/node_modules/@types/unist": {
+      "version": "3.0.3",
+      "resolved": "https://registry.npmjs.org/@types/unist/-/unist-3.0.3.tgz",
+      "integrity": "sha512-ko/gIFJRv177XgZsZcBwnqJN5x/Gien8qNOn0D5bQU/zAzVf9Zt3BlcUiLqhV9y4ARk0GbT3tnUiPNgnTXzc/Q=="
+    },
+    "node_modules/vfile/node_modules/@types/unist": {
+      "version": "3.0.3",
+      "resolved": "https://registry.npmjs.org/@types/unist/-/unist-3.0.3.tgz",
+      "integrity": "sha512-ko/gIFJRv177XgZsZcBwnqJN5x/Gien8qNOn0D5bQU/zAzVf9Zt3BlcUiLqhV9y4ARk0GbT3tnUiPNgnTXzc/Q=="
+    },
     "node_modules/walk-up-path": {
       "version": "3.0.1",
       "resolved": "https://registry.npmjs.org/walk-up-path/-/walk-up-path-3.0.1.tgz",
@@ -25010,6 +26497,23 @@
       "funding": {
         "url": "https://github.com/sponsors/sindresorhus"
       }
+    },
+    "node_modules/zod": {
+      "version": "3.23.8",
+      "resolved": "https://registry.npmjs.org/zod/-/zod-3.23.8.tgz",
+      "integrity": "sha512-XBx9AXhXktjUqnepgTiE5flcKIYWi/rme0Eaj+5Y0lftuGBq+jyRu/md4WnuxqgP1ubdpNCsYEYPxrzVHD8d6g==",
+      "funding": {
+        "url": "https://github.com/sponsors/colinhacks"
+      }
+    },
+    "node_modules/zwitch": {
+      "version": "2.0.4",
+      "resolved": "https://registry.npmjs.org/zwitch/-/zwitch-2.0.4.tgz",
+      "integrity": "sha512-bXE4cR/kVZhKZX/RjPEflHaKVhUVl85noU3v6b8apfQEc1x4A+zBxjZ4lN8LqGd6WZ3dl98pY4o717VFmoPp+A==",
+      "funding": {
+        "type": "github",
+        "url": "https://github.com/sponsors/wooorm"
+      }
     }
   }
 }
diff --git a/client/package.json b/client/package.json
index d45f13ae7..be8a932f4 100644
--- a/client/package.json
+++ b/client/package.json
@@ -85,11 +85,14 @@
     "memoize-one": "^5.1.1",
     "openseadragon": "^4.1.1",
     "pako": "^2.0.3",
+    "re-resizable": "^6.10.1",
     "react": "^18.3.1",
     "react-async": "^10.0.1",
     "react-dom": "^18.3.1",
+    "react-draggable": "^4.4.5",
     "react-flip-toolkit": "^7.0.12",
     "react-icons": "^4.2.0",
+    "react-markdown": "^9.0.1",
     "react-redux": "^7.2.0",
     "redux": "^4.0.5",
     "redux-thunk": "^2.3.0",
@@ -97,7 +100,8 @@
     "regl": "^2.1.0",
     "sha1": "^1.1.1",
     "tinyqueue": "^2.0.3",
-    "whatwg-fetch": "^3.2.0"
+    "whatwg-fetch": "^3.2.0",
+    "zod": "^3.23.8"
   },
   "devDependencies": {
     "@babel/core": "^7.13.16",
diff --git a/client/src/actions/index.ts b/client/src/actions/index.ts
index d1e8bbf05..5e0782f4f 100644
--- a/client/src/actions/index.ts
+++ b/client/src/actions/index.ts
@@ -585,6 +585,11 @@ function fetchJson<T>(pathAndQuery: string, apiPrefix?: string): Promise<T> {
   ) as Promise<T>;
 }
 
+export const revertToAction = (targetCount: number) => ({
+  type: "@@undoable/revert-to-action",
+  targetCount,
+});
+
 export default {
   doInitialDataLoad,
   requestDifferentialExpression,
diff --git a/client/src/components/Agent/AgentComponent.tsx b/client/src/components/Agent/AgentComponent.tsx
new file mode 100644
index 000000000..dd85f289a
--- /dev/null
+++ b/client/src/components/Agent/AgentComponent.tsx
@@ -0,0 +1,442 @@
+import React, {
+  FC,
+  useState,
+  useMemo,
+  FormEvent,
+  useRef,
+  useEffect,
+} from "react";
+import { useDispatch, useStore, useSelector } from "react-redux";
+import ReactMarkdown from "react-markdown";
+import Draggable from "react-draggable";
+import { Resizable } from "re-resizable";
+import { createUITools } from "./tools";
+import { AgentRunner, ChatMessage } from "./AgentRunner";
+import { MessageType } from "./agent";
+import { AppDispatch, RootState } from "../../reducers";
+import { revertToAction } from "../../actions";
+
+export const AgentComponent: FC = () => {
+  const dispatch = useDispatch<AppDispatch>();
+  const { getState } = useStore();
+  const [input, setInput] = useState("");
+  const [chatHistory, setChatHistory] = useState<ChatMessage[]>([]);
+  const [isLoading, setIsLoading] = useState(false);
+  const [isDrawerOpen, setIsDrawerOpen] = useState(true);
+  const inputRef = useRef<HTMLInputElement>(null);
+  const [firstActionCount, setFirstActionCount] = useState(0);
+
+  const cardRef = useRef<HTMLDivElement>(null);
+  const chatHistoryRef = useRef<HTMLDivElement>(null);
+  const [editingMessageId, setEditingMessageId] = useState<number | null>(null);
+  const [editText, setEditText] = useState("");
+  const editInputRef = useRef<HTMLInputElement>(null);
+  const [position, setPosition] = useState({ x: 0, y: 0 });
+  const [size, setSize] = useState({ width: 400, height: 300 });
+
+  const agentRunner = useMemo(() => {
+    const tools = createUITools(dispatch, getState);
+    return new AgentRunner(tools);
+  }, [dispatch, getState]);
+
+  const actionCount = useSelector((state: RootState) => state.actionCount);
+
+  useEffect(() => {
+    const handleKeyDown = (e: KeyboardEvent) => {
+      if (e.key === "Escape") {
+        inputRef.current?.blur();
+      }
+    };
+
+    document.addEventListener("keydown", handleKeyDown);
+    return () => {
+      document.removeEventListener("keydown", handleKeyDown);
+    };
+  }, []);
+
+  const scrollToBottom = () => {
+    if (chatHistoryRef.current) {
+      chatHistoryRef.current.scrollTop = chatHistoryRef.current.scrollHeight;
+    }
+  };
+
+  const handleSubmit = async (e: FormEvent) => {
+    e.preventDefault();
+    if (!input.trim() || isLoading) return;
+
+    setIsLoading(true);
+
+    const userMessage = {
+      role: "user" as const,
+      content: input,
+      timestamp: Date.now(),
+      type: MessageType.Message,
+      messageId: Date.now(),
+      actionCount,
+    };
+    if (agentRunner.chatHistory.length === 0) {
+      setFirstActionCount(actionCount);
+    }
+
+    agentRunner.chatHistory.push(userMessage);
+    setChatHistory(agentRunner.chatHistory);
+    setTimeout(scrollToBottom, 100);
+
+    const currentInput = input;
+    setInput("");
+
+    try {
+      await agentRunner.processQuery(currentInput);
+      const lastMessage =
+        agentRunner.chatHistory[agentRunner.chatHistory.length - 1];
+      if (lastMessage.role === "assistant") {
+        lastMessage.actionCount = actionCount;
+      }
+      setChatHistory(agentRunner.chatHistory);
+      setTimeout(scrollToBottom, 0);
+    } catch (error) {
+      console.error("Agent Runner Error:", error);
+      const errorMessage = {
+        role: "assistant" as const,
+        content: "Sorry, something went wrong. Please try again.",
+        timestamp: Date.now(),
+        type: MessageType.Message,
+        messageId: Date.now(),
+        actionCount,
+      };
+      agentRunner.chatHistory.push(errorMessage);
+      setChatHistory(agentRunner.chatHistory);
+      setTimeout(scrollToBottom, 100);
+    } finally {
+      setIsLoading(false);
+      setTimeout(() => {
+        inputRef.current?.focus();
+      }, 0);
+    }
+  };
+
+  const handleReset = () => {
+    dispatch(revertToAction(firstActionCount));
+    setChatHistory([]);
+    agentRunner.clearHistory();
+    setInput("");
+  };
+
+  const handleEditStart = (message: ChatMessage) => {
+    setEditingMessageId(message.messageId);
+    setEditText(message.content);
+    setTimeout(() => {
+      editInputRef.current?.focus();
+    }, 0);
+  };
+
+  const handleEditSubmit = async (message: ChatMessage) => {
+    dispatch(revertToAction(message.actionCount));
+    agentRunner.replaceMessage(message.messageId, editText, actionCount);
+    setChatHistory(agentRunner.chatHistory);
+
+    setEditingMessageId(null);
+    setEditText("");
+    setIsLoading(true);
+
+    try {
+      await agentRunner.processQuery(editText, 20, true);
+      setChatHistory(agentRunner.chatHistory);
+      setTimeout(scrollToBottom, 100);
+    } catch (error) {
+      console.error("Agent Runner Error:", error);
+      const errorMessage = {
+        role: "assistant" as const,
+        content: "Sorry, something went wrong. Please try again.",
+        timestamp: Date.now(),
+        type: MessageType.Message,
+        messageId: Date.now(),
+        actionCount,
+      };
+      agentRunner.chatHistory.push(errorMessage);
+      setChatHistory(agentRunner.chatHistory);
+      setTimeout(scrollToBottom, 100);
+    } finally {
+      setIsLoading(false);
+    }
+  };
+
+  return (
+    <Draggable
+      handle=".drag-handle"
+      position={position}
+      onStop={(_, data) => setPosition({ x: data.x, y: data.y })}
+    >
+      <Resizable
+        size={size}
+        onResizeStop={(_e, _dir, _ref, d) => {
+          setSize({
+            width: size.width + d.width,
+            height: size.height + d.height,
+          });
+        }}
+        minWidth={isDrawerOpen ? 200 : 20}
+        minHeight={isDrawerOpen ? 200 : 0}
+        maxWidth={isDrawerOpen ? "95vw" : 200}
+        maxHeight={isDrawerOpen ? "95vh" : 60}
+      >
+        <div
+          ref={cardRef}
+          className="agent-component"
+          style={{
+            position: "fixed",
+            width: "100%",
+            height: isDrawerOpen ? "100%" : "auto",
+            borderRadius: "12px",
+            overflow: "hidden",
+            display: "flex",
+            flexDirection: "column",
+            boxShadow: "0 4px 12px rgba(0,0,0,0.1)",
+            border: "1px solid #eaeaea",
+            backgroundColor: "white",
+          }}
+          tabIndex={-1}
+        >
+          <div
+            className="drag-handle"
+            style={{
+              padding: "8px 16px",
+              backgroundColor: "#f5f5f5",
+              cursor: "move",
+              borderBottom: isDrawerOpen ? "1px solid #eaeaea" : "none",
+              display: "flex",
+              justifyContent: "space-between",
+              alignItems: "center",
+            }}
+          >
+            <span>
+              <b>CELL x AI</b>
+            </span>
+            <button
+              type="button"
+              onClick={() => setIsDrawerOpen(!isDrawerOpen)}
+              style={{
+                background: "none",
+                border: "none",
+                cursor: "pointer",
+              }}
+            >
+              {isDrawerOpen ? "▼" : "▲"}
+            </button>
+          </div>
+          <div
+            className="chat-drawer"
+            style={{
+              opacity: isDrawerOpen ? 1 : 0,
+              backgroundColor: "white",
+              visibility: isDrawerOpen ? "visible" : "hidden",
+              boxShadow: "0 -8px 24px -4px rgba(0,0,0,0.15)",
+              zIndex: 2,
+              flex: 1,
+              display: "flex",
+              flexDirection: "column",
+              overflow: "hidden",
+              transition: "opacity 0.2s ease-in-out",
+              height: isDrawerOpen ? "auto" : 0,
+            }}
+          >
+            <div
+              ref={chatHistoryRef}
+              className="chat-history"
+              style={{
+                flex: 1,
+                overflowY: "auto",
+                padding: "20px 20px 0",
+              }}
+            >
+              {chatHistory.map((message) => (
+                <div
+                  key={message.timestamp}
+                  style={{
+                    display: "flex",
+                    justifyContent:
+                      message.role === "user" ? "flex-end" : "flex-start",
+                    margin: "12px 0",
+                    width: "100%",
+                    position: "relative",
+                  }}
+                >
+                  {message.role === "user" && (
+                    <button
+                      type="button"
+                      onClick={() => handleEditStart(message)}
+                      style={{
+                        position: "absolute",
+                        top: "-8px",
+                        right: "-8px",
+                        width: "24px",
+                        height: "24px",
+                        borderRadius: "50%",
+                        border: "1px solid #ddd",
+                        backgroundColor: "white",
+                        cursor: "pointer",
+                        display: "flex",
+                        alignItems: "center",
+                        justifyContent: "center",
+                        padding: 0,
+                        zIndex: 1,
+                      }}
+                    >
+                      <svg
+                        width="14"
+                        height="14"
+                        viewBox="0 0 24 24"
+                        fill="none"
+                        stroke="currentColor"
+                        strokeWidth="2"
+                        strokeLinecap="round"
+                        strokeLinejoin="round"
+                      >
+                        <path d="M11 4H4a2 2 0 0 0-2 2v14a2 2 0 0 0 2 2h14a2 2 0 0 0 2-2v-7" />
+                        <path d="M18.5 2.5a2.121 2.121 0 0 1 3 3L12 15l-4 1 1-4 9.5-9.5z" />
+                      </svg>
+                    </button>
+                  )}
+                  <div
+                    style={{
+                      padding: "12px",
+                      paddingBottom: "0",
+                      borderRadius: "12px",
+                      backgroundColor:
+                        message.role === "user"
+                          ? "#007bff"
+                          : message.type === "summary"
+                          ? "#e3f2fd"
+                          : "#f5f5f5",
+                      color: message.role === "user" ? "white" : "black",
+                      maxWidth: "70%",
+                    }}
+                  >
+                    {editingMessageId === message.messageId ? (
+                      <form
+                        onSubmit={(e) => {
+                          e.preventDefault();
+                          handleEditSubmit(message).catch(console.error);
+                        }}
+                        style={{
+                          display: "flex",
+                          gap: "8px",
+                          padding: "8px 0",
+                          width: "100%",
+                        }}
+                      >
+                        <input
+                          ref={editInputRef}
+                          type="text"
+                          value={editText}
+                          onChange={(e) => setEditText(e.target.value)}
+                          style={{
+                            padding: "8px 12px",
+                            borderRadius: "4px",
+                            border: "1px solid #ddd",
+                            color: "black",
+                            width: "100%",
+                          }}
+                          onKeyDown={(e) => {
+                            if (e.key === "Escape") {
+                              setEditingMessageId(null);
+                              setEditText("");
+                            }
+                          }}
+                        />
+                      </form>
+                    ) : (
+                      <ReactMarkdown>{message.content}</ReactMarkdown>
+                    )}
+                  </div>
+                </div>
+              ))}
+            </div>
+          </div>
+          <div
+            className="input-section"
+            style={{
+              backgroundColor: "white",
+              zIndex: 1,
+              marginTop: "auto",
+              opacity: isDrawerOpen ? 1 : 0,
+              visibility: isDrawerOpen ? "visible" : "hidden",
+              height: isDrawerOpen ? "auto" : 0,
+              transition: "opacity 0.2s ease-in-out",
+            }}
+          >
+            <form
+              onSubmit={handleSubmit}
+              style={{
+                padding: "20px",
+                display: "flex",
+                gap: "10px",
+              }}
+            >
+              <button
+                type="button"
+                onClick={handleReset}
+                style={{
+                  width: "40px",
+                  height: "40px",
+                  borderRadius: "50%",
+                  border: "1px solid #ddd",
+                  backgroundColor: "white",
+                  color: "#666",
+                  cursor: "pointer",
+                  display: "flex",
+                  alignItems: "center",
+                  justifyContent: "center",
+                  padding: 0,
+                }}
+              >
+                <svg
+                  width="20"
+                  height="20"
+                  viewBox="0 0 24 24"
+                  fill="none"
+                  stroke="currentColor"
+                  strokeWidth="2"
+                  strokeLinecap="round"
+                  strokeLinejoin="round"
+                >
+                  <path d="M3 12a9 9 0 1 0 9-9 9.75 9.75 0 0 0-6.74 2.74L3 8" />
+                  <path d="M3 3v5h5" />
+                </svg>
+              </button>
+              <input
+                ref={inputRef}
+                type="text"
+                value={input}
+                onChange={(e) => setInput(e.target.value)}
+                placeholder="Type your query..."
+                disabled={isLoading}
+                style={{
+                  flex: 1,
+                  padding: "12px",
+                  borderRadius: "4px",
+                  border: "1px solid #ddd",
+                  width: "100%",
+                }}
+              />
+              <button
+                type="submit"
+                disabled={isLoading}
+                style={{
+                  padding: "0 20px",
+                  borderRadius: "4px",
+                  border: "none",
+                  backgroundColor: "#007bff",
+                  color: "white",
+                  cursor: isLoading ? "not-allowed" : "pointer",
+                }}
+              >
+                {isLoading ? "Processing..." : "Send"}
+              </button>
+            </form>
+          </div>
+        </div>
+      </Resizable>
+    </Draggable>
+  );
+};
diff --git a/client/src/components/Agent/AgentRunner.ts b/client/src/components/Agent/AgentRunner.ts
new file mode 100644
index 000000000..693613bde
--- /dev/null
+++ b/client/src/components/Agent/AgentRunner.ts
@@ -0,0 +1,152 @@
+import { UITool } from "./UITool";
+import {
+  AgentMessage,
+  BaseMessage,
+  getNextAgentStep,
+  MessageType,
+} from "./agent";
+
+export interface ChatMessage extends BaseMessage {
+  role: "user" | "assistant";
+  content: string;
+  timestamp: number;
+  type: MessageType;
+  actionCount: number;
+}
+
+// We need an intermediate message history PER QUERY and then we need a persistent chat history
+// Which will contain the user's initial inputs and the agent's final outputs.
+export class AgentRunner {
+  private messages: AgentMessage[] = [];
+
+  public chatHistory: ChatMessage[] = [];
+
+  private tools: Record<string, UITool>;
+
+  constructor(tools: UITool[]) {
+    this.tools = tools.reduce((acc, tool) => {
+      acc[tool.name] = tool;
+      return acc;
+    }, {} as Record<string, UITool>);
+  }
+
+  async processQuery(
+    userInput: string,
+    maxSteps = 20,
+    isEdit = false
+  ): Promise<string> {
+    /* eslint-disable no-await-in-loop -- Steps must be executed sequentially */
+
+    const userMessageId = Date.now();
+
+    // Only add to internal messages array - chat history is handled by the component
+    if (!isEdit) {
+      this.messages.push({
+        role: "user",
+        content: userInput,
+        type: MessageType.Message,
+        messageId: userMessageId,
+      });
+    }
+
+    let stepCount = 0;
+    while (stepCount < maxSteps) {
+      stepCount += 1;
+      const step = await getNextAgentStep(this.messages);
+
+      if (step.type === "message" || step.type === "summary") {
+        const assistantMessageId = Date.now();
+        const finalResponse = step.content ?? "";
+        const assistantMessage = {
+          role: "assistant",
+          content: finalResponse,
+          timestamp: Date.now(),
+          type: step.type as MessageType,
+          messageId: assistantMessageId,
+        };
+
+        // Add to messages without timestamp
+        this.messages.push({
+          role: assistantMessage.role as "user" | "assistant" | "function",
+          content: assistantMessage.content,
+          type: assistantMessage.type,
+          messageId: assistantMessageId,
+        });
+
+        // Add to chat history with timestamp
+        this.chatHistory.push(assistantMessage as ChatMessage);
+        return finalResponse;
+      }
+
+      if (step.type === "tool" && step.tool) {
+        const toolMessageId = Date.now();
+        const tool = this.tools[step.tool.name];
+        if (!tool) {
+          throw new Error(`Unknown tool: ${step.tool.name}`);
+        }
+
+        const result = await tool.invoke(JSON.stringify(step.tool.result));
+        this.messages.push({
+          role: "function",
+          name: step.tool.name,
+          content: JSON.stringify(step.tool.result),
+          type: MessageType.Tool,
+          messageId: toolMessageId,
+        });
+        this.messages.push({
+          role: "assistant",
+          content: result,
+          type: MessageType.Message,
+          messageId: toolMessageId + 1,
+        });
+      }
+    }
+    const timeoutMessage = `Conversation exceeded maximum of ${maxSteps} steps`;
+    this.messages.push({
+      role: "assistant",
+      content: timeoutMessage,
+      type: MessageType.Message,
+      messageId: Date.now(),
+    });
+    /* eslint-enable no-await-in-loop -- Steps must be executed sequentially */
+
+    return timeoutMessage;
+  }
+
+  clearHistory(): void {
+    this.messages = [];
+    this.chatHistory = [];
+  }
+
+  replaceMessage(
+    messageId: number,
+    newContent: string,
+    actionCount: number
+  ): void {
+    // Replace in messages array
+    const messageIndex = this.messages.findIndex(
+      (m) => m.messageId === messageId
+    );
+    if (messageIndex !== -1) {
+      this.messages = this.messages.slice(0, messageIndex + 1);
+      this.messages[messageIndex] = {
+        ...this.messages[messageIndex],
+        content: newContent,
+      };
+    }
+
+    // Replace in chat history
+    const chatIndex = this.chatHistory.findIndex(
+      (m) => m.messageId === messageId
+    );
+    if (chatIndex !== -1) {
+      this.chatHistory = this.chatHistory.slice(0, chatIndex + 1);
+      this.chatHistory[chatIndex] = {
+        ...this.chatHistory[chatIndex],
+        content: newContent,
+        timestamp: Date.now(),
+        actionCount,
+      };
+    }
+  }
+}
diff --git a/client/src/components/Agent/UITool.ts b/client/src/components/Agent/UITool.ts
new file mode 100644
index 000000000..59a0a8a85
--- /dev/null
+++ b/client/src/components/Agent/UITool.ts
@@ -0,0 +1,11 @@
+export class UITool {
+  constructor(
+    public name: string,
+    private action: (args?: Record<string, string>) => Promise<string>
+  ) {}
+
+  async invoke(argsJson: string): Promise<string> {
+    const args = argsJson ? JSON.parse(argsJson) : undefined;
+    return this.action(args);
+  }
+}
diff --git a/client/src/components/Agent/actions.ts b/client/src/components/Agent/actions.ts
new file mode 100644
index 000000000..a5e9f0e6f
--- /dev/null
+++ b/client/src/components/Agent/actions.ts
@@ -0,0 +1,392 @@
+import actions from "actions";
+import { Dataframe } from "util/dataframe";
+import { isDataframeDictEncodedColumn } from "util/dataframe/types";
+import { Field } from "common/types/schema";
+import { Query } from "annoMatrix/query";
+import { AppDispatch, GetState } from "../../reducers";
+import { subsetAction, resetSubsetAction } from "../../actions/viewStack";
+
+export const performSubset =
+  () => (dispatch: AppDispatch, getState: GetState) => {
+    const state = getState();
+    const crossfilter = state.obsCrossfilter;
+    if (!crossfilter) return;
+    const selectedCount = crossfilter.countSelected();
+    const subsetPossible =
+      selectedCount !== 0 && selectedCount !== crossfilter.size();
+
+    if (subsetPossible) {
+      dispatch(subsetAction());
+    }
+  };
+
+export const performUnsubset = () => (dispatch: AppDispatch) => {
+  dispatch(resetSubsetAction());
+};
+
+export const performCategoricalSelection =
+  (args: Record<string, string>) =>
+  async (dispatch: AppDispatch, getState: GetState): Promise<string> => {
+    if (args?.error) {
+      return `${args.error}. I will halt execution and report this error to the user.`;
+    }
+
+    const { annoMatrix, obsCrossfilter } = getState();
+    const { schema } = annoMatrix;
+
+    const columnName = args.column_name;
+    const colSchema = schema.annotations.obsByName[columnName];
+    const { categories: allCategoryValues } = colSchema;
+    const categoryValue = args.category_value;
+
+    const [categoryData]: [Dataframe] = await Promise.all([
+      annoMatrix.fetch(Field.obs, columnName),
+    ]);
+
+    // our data
+    const column = categoryData.icol(0);
+
+    const labelName = isDataframeDictEncodedColumn(column)
+      ? column.invCodeMapping[categoryValue]
+      : categoryValue;
+
+    if (
+      obsCrossfilter.annoMatrix.nObs ===
+      obsCrossfilter.obsCrossfilter.countSelected()
+    ) {
+      await dispatch(
+        actions.selectCategoricalAllMetadataAction(
+          "categorical metadata filter none of these",
+          columnName,
+          allCategoryValues,
+          false
+        )
+      );
+    }
+
+    await dispatch(
+      actions.selectCategoricalMetadataAction(
+        "categorical metadata filter select",
+        columnName,
+        allCategoryValues,
+        labelName,
+        true
+      )
+    );
+    return `Performed categorical selection on ${args.category_value}.`;
+  };
+
+export const performHistogramSelection =
+  (args: Record<string, string>) =>
+  async (dispatch: AppDispatch, getState: GetState): Promise<string> => {
+    const { annoMatrix } = getState();
+    let query;
+    let df: Dataframe;
+    const { schema } = annoMatrix;
+    const varIndex = schema?.annotations?.var?.index;
+    if (args.histogram_type === "geneset") {
+      if (args?.status === "need_available_genesets") {
+        const { genesets } = getState();
+        const genesetNames = Array.from(genesets.genesets.keys());
+        if (genesetNames.length === 0) {
+          return "There are no genesets available to perform selection on. I must now create a new geneset and then try again. I will continue execution.";
+        }
+        return `I have decided to perform histogram selection on a geneset. Here are the available geneset names: ${genesetNames}. I must select one of these genesets to perform selection on. If there are no matching genesets, I must create a new geneset. I will continue execution.`;
+      }
+
+      const geneset = getState().genesets.genesets.get(args.histogram_name);
+      if (!geneset || geneset.genes.size === 0) {
+        return "The selected geneset is empty. Please select a different geneset or add genes to this one.";
+      }
+
+      query = [
+        Field.X,
+        {
+          summarize: {
+            method: "mean",
+            field: "var",
+            column: varIndex,
+            values: [...geneset.genes.keys()],
+          },
+        },
+      ];
+    } else if (args.histogram_type === "metadata") {
+      query = [Field.obs, args.histogram_name];
+    } else if (args.histogram_type === "gene") {
+      query = [
+        "X",
+        {
+          where: {
+            column: varIndex,
+            field: Field.var,
+            value: args.histogram_name,
+          },
+        },
+      ];
+    } else {
+      return "Invalid histogram type specified.";
+    }
+
+    try {
+      df = await annoMatrix.fetch(query[0] as Field, query[1] as Query);
+    } catch (error) {
+      return `${args.histogram_type} is not a valid histogram type for ${args.histogram_name}. I must now try a different histogram type for the same data: ${args.histogram_name}. I will continue execution.`;
+    }
+
+    const column = df.icol(0);
+    let summary;
+
+    if (args.histogram_type === "geneset") {
+      const values = column.asArray() as number[];
+      if (!values || !values.length) {
+        return "No valid data found for this geneset.";
+      }
+
+      try {
+        const min = values.reduce((a, b) => Math.min(a, b), values[0]);
+        const max = values.reduce((a, b) => Math.max(a, b), values[0]);
+        summary = { min, max };
+      } catch (error) {
+        console.error("Error calculating min/max:", error);
+        return "Error processing geneset data.";
+      }
+    } else {
+      summary = column.summarizeContinuous();
+    }
+
+    const { min, max } = summary;
+
+    let lo = args.range_low ? parseFloat(args.range_low) : min;
+    let hi = args.range_high ? parseFloat(args.range_high) : max;
+
+    lo = Math.max(lo, min);
+    hi = Math.min(hi, max);
+
+    try {
+      await dispatch(
+        actions.selectContinuousMetadataAction(
+          "type continuous metadata histogram start",
+          query,
+          [lo, hi]
+        )
+      );
+
+      await dispatch(
+        actions.selectContinuousMetadataAction(
+          "type continuous metadata histogram brush",
+          query,
+          [lo, hi]
+        )
+      );
+
+      await dispatch(
+        actions.selectContinuousMetadataAction(
+          "type continuous metadata histogram end",
+          query,
+          [lo, hi]
+        )
+      );
+    } catch (error) {
+      console.log(error);
+    }
+
+    return `Successfully performed histogram selection for ${args.histogram_name} with range ${lo} to ${hi}.`;
+  };
+
+export const performExpandCategory = (args: Record<string, string>) => () => {
+  const categoryElement = document.querySelector(
+    `[data-testid="category-${args.category_name}"]`
+  );
+  if (categoryElement instanceof HTMLElement) {
+    const isNotExpandedElement = categoryElement.querySelector(
+      '[data-testid="category-expand-is-not-expanded"]'
+    );
+    if (isNotExpandedElement) {
+      (
+        categoryElement.querySelector(
+          `[data-testid="${args.category_name}:category-expand"]`
+        ) as HTMLElement
+      )?.click();
+    }
+  }
+};
+
+// export const performPanning =
+//   () => (dispatch: AppDispatch, getState: GetState) => {
+//     console.log("Performed panning");
+//   };
+
+// export const performZoomIn =
+//   () => (dispatch: AppDispatch, getState: GetState) => {
+//     console.log("Performed zoom in");
+//   };
+
+// export const performZoomOut =
+//   () => (dispatch: AppDispatch, getState: GetState) => {
+//     console.log("Performed zoom out");
+//   };
+
+export const performColorByGene =
+  (args: Record<string, string>) =>
+  async (dispatch: AppDispatch, getState: GetState): Promise<string> => {
+    const { gene } = args;
+
+    // Get valid gene names from the matrix
+    const {
+      annoMatrix,
+      colors: { colorAccessor },
+    } = getState();
+    const { schema } = annoMatrix;
+    const varIndex = schema.annotations.var.index;
+    const df = await annoMatrix.fetch(Field.var, varIndex);
+
+    // Check if there is a filtered column
+    const isFilteredCol = "feature_is_filtered";
+    const isFiltered =
+      annoMatrix.getMatrixColumns(Field.var).includes(isFilteredCol) &&
+      (await annoMatrix.fetch(Field.var, isFilteredCol));
+
+    let validGenes;
+    if (isFiltered) {
+      const isFilteredArray = isFiltered.col(isFilteredCol).asArray();
+      validGenes = df
+        .col(varIndex)
+        .asArray()
+        .filter((_, index: number) => !isFilteredArray[index] && _) as string[];
+    } else {
+      validGenes = df.col(varIndex).asArray() as string[];
+    }
+
+    // Verify gene is valid before proceeding
+    if (!validGenes.includes(gene)) {
+      return "The requested gene name is not present in the dataset. Please instruct the user to select a valid gene.";
+    }
+    if (colorAccessor === gene) {
+      return "The visualization is already colored by the requested gene.";
+    }
+    dispatch({ type: "single user defined gene start" });
+    dispatch(actions.requestUserDefinedGene(gene));
+    dispatch({ type: "single user defined gene complete" });
+    dispatch(actions.requestSingleGeneExpressionCountsForColoringPOST(gene));
+    return "Successfully colored the visualization by the requested gene.";
+  };
+
+export const performExpandGene =
+  (args: Record<string, string>) => async (dispatch: AppDispatch) => {
+    const { gene } = args;
+    dispatch({ type: "single user defined gene start" });
+    dispatch(actions.requestUserDefinedGene(gene));
+    dispatch({ type: "single user defined gene complete" });
+    await new Promise((resolve) => setTimeout(resolve, 500));
+    const element = document.querySelector(`[data-testid="maximize-${gene}"]`);
+    if (element instanceof HTMLElement) {
+      element.click();
+    }
+  };
+
+export const performColorByGeneset =
+  (args: Record<string, string>) =>
+  async (dispatch: AppDispatch, getState: GetState): Promise<string> => {
+    const { geneset } = args;
+    if (args?.status === "need_available_genesets") {
+      const { genesets } = getState();
+      const genesetNames = Array.from(genesets.genesets.keys());
+      if (genesetNames.length === 0) {
+        return "There are no genesets available. I must now create a new geneset and then try again. I will continue execution.";
+      }
+      return `I have decided to perform the color by geneset action. If there are no matching genesets, I must create a new geneset. IMPORTANT: Here are the available geneset names: ${genesetNames}. I will continue execution.`;
+    }
+
+    dispatch({
+      type: "color by geneset mean expression",
+      geneset,
+    });
+    return `Successfully colored by geneset: ${geneset}`;
+  };
+
+export const performColorByMetadata =
+  (args: Record<string, string>) =>
+  async (dispatch: AppDispatch, getState: GetState): Promise<string> => {
+    if (args?.error) {
+      return `${args.error}. I will halt execution and report this error to the user.`;
+    }
+    const {
+      colors: { colorAccessor },
+    } = getState();
+    // Determine if the metadata is categorical or continuous
+    const { annoMatrix } = getState();
+    const { schema } = annoMatrix;
+    const metadata = schema.annotations.obsByName[args.metadata_name];
+    const { categories: allCategoryValues } = metadata;
+    const isCategorical = allCategoryValues !== undefined;
+
+    if (isCategorical) {
+      const categoryElement = document.querySelector(
+        `[data-testid="category-${args.metadata_name}"]`
+      );
+      if (categoryElement instanceof HTMLElement) {
+        const isNotExpandedElement = categoryElement.querySelector(
+          '[data-testid="category-expand-is-not-expanded"]'
+        );
+        if (isNotExpandedElement) {
+          (
+            categoryElement.querySelector(
+              `[data-testid="${args.metadata_name}:category-expand"]`
+            ) as HTMLElement
+          )?.click();
+        }
+      }
+
+      if (colorAccessor === args.metadata_name) {
+        return `The visualization is already colored by the requested metadata: ${args.metadata_name}.`;
+      }
+
+      dispatch({
+        type: "color by categorical metadata",
+        colorAccessor: args.metadata_name,
+      });
+    } else {
+      dispatch({
+        type: "color by continuous metadata",
+        colorAccessor: args.metadata_name,
+      });
+    }
+    return `Successfully colored by metadata: ${args.metadata_name}`;
+  };
+
+export const performCreateGeneset =
+  (args: Record<string, string | string[]>) =>
+  async (dispatch: AppDispatch) => {
+    const genesetName = args.geneset_name as string;
+    const genesToPopulateGeneset = args.genes_to_populate_geneset as string[];
+    const genesetDescription = args.geneset_description as string;
+    dispatch({
+      type: "geneset: create",
+      genesetName: genesetName.trim(),
+      genesetDescription,
+    });
+
+    if (genesToPopulateGeneset && genesToPopulateGeneset.length > 0) {
+      const genesTmpHardcodedFormat = genesToPopulateGeneset.map((gene) => ({
+        geneSymbol: gene.trim(),
+      }));
+      await dispatch(
+        actions.genesetAddGenes(genesetName, genesTmpHardcodedFormat)
+      );
+    }
+  };
+
+// export const performXYScatterplot =
+//   () => (dispatch: AppDispatch, getState: GetState) => {
+//     console.log("Performed XY scatterplot");
+//   };
+
+// export const performShowCellGuide =
+//   () => (dispatch: AppDispatch, getState: GetState) => {
+//     console.log("Performed show cell guide");
+//   };
+
+// export const performShowGeneCard =
+//   () => (dispatch: AppDispatch, getState: GetState) => {
+//     console.log("Performed show gene card");
+//   };
diff --git a/client/src/components/Agent/agent.ts b/client/src/components/Agent/agent.ts
new file mode 100644
index 000000000..7d3b925dd
--- /dev/null
+++ b/client/src/components/Agent/agent.ts
@@ -0,0 +1,57 @@
+import { z } from "zod";
+
+const AgentStepResponseSchema = z.object({
+  type: z.enum(["tool", "message", "summary"]),
+  tool: z
+    .object({
+      name: z.string(),
+      result: z.record(
+        z.string(),
+        z.union([z.string(), z.array(z.string()), z.number(), z.null()])
+      ),
+    })
+    .optional(),
+  content: z.string().optional(),
+});
+
+export type AgentStepResponse = z.infer<typeof AgentStepResponseSchema>;
+
+export interface BaseMessage {
+  messageId: number;
+}
+
+export interface AgentMessage extends BaseMessage {
+  role: "user" | "assistant" | "function";
+  content: string;
+  name?: string;
+  type: MessageType;
+}
+
+export enum MessageType {
+  Message = "message",
+  Summary = "summary",
+  Tool = "tool",
+}
+
+export async function getNextAgentStep(
+  messages: AgentMessage[],
+  toolResults?: string
+): Promise<AgentStepResponse> {
+  const response = await fetch(
+    `${window.CELLXGENE.API.prefix}${window.CELLXGENE.API.version}agent/step`,
+    {
+      method: "POST",
+      headers: {
+        "Content-Type": "application/json",
+      },
+      body: JSON.stringify({ messages, toolResults }),
+    }
+  );
+
+  if (!response.ok) {
+    throw new Error(`API error: ${response.statusText}`);
+  }
+
+  const data = await response.json();
+  return AgentStepResponseSchema.parse(data);
+}
diff --git a/client/src/components/Agent/tools.ts b/client/src/components/Agent/tools.ts
new file mode 100644
index 000000000..18878fa16
--- /dev/null
+++ b/client/src/components/Agent/tools.ts
@@ -0,0 +1,160 @@
+import { AppDispatch, GetState } from "../../reducers";
+import {
+  performSubset,
+  performUnsubset,
+  performCategoricalSelection,
+  performHistogramSelection,
+  // performPanning,
+  // performZoomIn,
+  // performZoomOut,
+  performColorByGene,
+  performExpandGene,
+  performExpandCategory,
+  performColorByGeneset,
+  performColorByMetadata,
+  performCreateGeneset,
+  // performXYScatterplot,
+  // performShowCellGuide,
+  // performShowGeneCard,
+} from "./actions";
+import { UITool } from "./UITool";
+
+type ToolImplementation = {
+  action: (
+    dispatch: AppDispatch,
+    getState: GetState,
+    args?: Record<string, string>
+  ) => Promise<string>;
+};
+
+// This maps the tool names (defined in the backend) to their frontend implementations
+const TOOL_IMPLEMENTATIONS: Record<string, ToolImplementation> = {
+  subset: {
+    action: async (dispatch) => {
+      dispatch(performSubset());
+      return "Created subset from selection";
+    },
+  },
+
+  unsubset: {
+    action: async (dispatch) => {
+      dispatch(performUnsubset());
+      return "I reset the subset back to full dataset";
+    },
+  },
+
+  categorical_selection: {
+    action: async (dispatch, _getState, args): Promise<string> => {
+      if (!args) throw new Error("Categorical selection args are required");
+      const message = await dispatch(performCategoricalSelection(args));
+      return message;
+    },
+  },
+
+  histogram_selection: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Histogram selection args are required");
+      const message = await dispatch(performHistogramSelection(args));
+      return message;
+    },
+  },
+
+  // panning: {
+  //   action: async (dispatch) => {
+  //     dispatch(performPanning());
+  //     return "Performed panning";
+  //   },
+  // },
+
+  // zoom_in: {
+  //   action: async (dispatch) => {
+  //     dispatch(performZoomIn());
+  //     return "Performed zoom in";
+  //   },
+  // },
+
+  // zoom_out: {
+  //   action: async (dispatch) => {
+  //     dispatch(performZoomOut());
+  //     return "Performed zoom out";
+  //   },
+  // },
+
+  color_by_gene: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Gene name is required");
+      const returnMessage = await dispatch(performColorByGene(args));
+      return returnMessage;
+    },
+  },
+
+  expand_gene: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Gene name is required");
+      await dispatch(performExpandGene(args));
+      return `Expanded gene: ${args.gene}`;
+    },
+  },
+
+  color_by_geneset: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Geneset name is required");
+      const message = await dispatch(performColorByGeneset(args));
+      return message;
+    },
+  },
+
+  color_by_metadata: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Metadata name is required");
+      const message = await dispatch(performColorByMetadata(args));
+      return message;
+    },
+  },
+
+  expand_category: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Category name is required");
+      await dispatch(performExpandCategory(args));
+      return `Expanded category: ${args.category_name}`;
+    },
+  },
+
+  create_geneset: {
+    action: async (dispatch, _getState, args) => {
+      if (!args) throw new Error("Geneset args are required");
+      await dispatch(performCreateGeneset(args));
+      return "Created new geneset";
+    },
+  },
+
+  // xy_scatterplot: {
+  //   action: async (dispatch) => {
+  //     dispatch(performXYScatterplot());
+  //     return "Created XY scatterplot";
+  //   },
+  // },
+
+  // show_cell_guide: {
+  //   action: async (dispatch) => {
+  //     dispatch(performShowCellGuide());
+  //     return "Showed cell guide";
+  //   },
+  // },
+
+  // show_gene_card: {
+  //   action: async (dispatch) => {
+  //     dispatch(performShowGeneCard());
+  //     return "Showed gene card";
+  //   },
+  // },
+};
+
+export function createUITools(dispatch: AppDispatch, getState: GetState) {
+  return Object.entries(TOOL_IMPLEMENTATIONS).map(
+    ([name, implementation]) =>
+      new UITool(name, (args?: Record<string, string>) =>
+        implementation.action(dispatch, getState, args)
+      )
+  );
+}
diff --git a/client/src/components/Agent/types.ts b/client/src/components/Agent/types.ts
new file mode 100644
index 000000000..c6c64cdb4
--- /dev/null
+++ b/client/src/components/Agent/types.ts
@@ -0,0 +1,21 @@
+import { AppDispatch, GetState } from "../../reducers";
+
+export interface ToolParameter {
+  name: string;
+  description: string;
+  required: boolean;
+  type: "string" | "number" | "boolean" | "array";
+}
+
+export interface ToolConfig {
+  name: string;
+  description: string;
+  parameters?: ToolParameter[];
+  action: ActionFunction;
+}
+
+export type ActionFunction = (
+  dispatch: AppDispatch,
+  getState: GetState,
+  args?: Record<string, string>
+) => Promise<string>;
diff --git a/client/src/components/App/App.tsx b/client/src/components/App/App.tsx
index 822146cdf..45fdd9963 100644
--- a/client/src/components/App/App.tsx
+++ b/client/src/components/App/App.tsx
@@ -6,6 +6,8 @@ import actions from "actions";
 import { RootState, AppDispatch } from "reducers";
 import Controls from "common/components/Controls/Controls";
 import { theme } from "util/theme";
+import { getFeatureFlag } from "util/featureFlags/featureFlags";
+import { FEATURES } from "util/featureFlags/features";
 import DatasetSelector from "../DatasetSelector/DatasetSelector";
 import DiffexNotice from "../DiffexNotice/DiffexNotice";
 import BottomBanner from "../BottomBanner/BottomBanner";
@@ -22,6 +24,7 @@ import { selectIsSeamlessEnabled } from "../../selectors/datasetMetadata";
 import Graph from "../Graph/Graph";
 import Scatterplot from "../scatterplot/scatterplot";
 import PanelEmbedding from "../PanelEmbedding/PanelEmbedding";
+import { AgentComponent } from "../Agent/AgentComponent";
 
 interface StateProps {
   loading: RootState["controls"]["loading"];
@@ -73,6 +76,7 @@ class App extends React.Component<StateProps & { dispatch: AppDispatch }> {
       scatterplotXXaccessor,
       scatterplotYYaccessor,
     } = this.props;
+
     return (
       <Container>
         <StyledEngineProvider injectFirst>
@@ -98,27 +102,52 @@ class App extends React.Component<StateProps & { dispatch: AppDispatch }> {
               )}
               {loading || error ? null : (
                 <>
+                  {getFeatureFlag(FEATURES.AGENT) && (
+                    <div
+                      style={{
+                        position: "fixed",
+                        bottom: 20,
+                        right: 20,
+                        zIndex: 9999,
+                      }}
+                    >
+                      <AgentComponent />
+                    </div>
+                  )}
                   <Layout
                     addTopPadding={!datasetMetadataError || isCellGuideCxg}
                     renderGraph={(viewportRef: HTMLDivElement) => (
-                      <>
+                      <div
+                        style={{
+                          display: "flex",
+                          flexDirection: "column",
+                          height: "100%",
+                        }}
+                      >
                         <GlobalHotkeys />
                         <Controls>
                           <MenuBar />
                         </Controls>
                         <Legend />
-                        <Graph
-                          viewportRef={viewportRef}
-                          key={graphRenderCounter}
-                        />
-                        {scatterplotXXaccessor && scatterplotYYaccessor && (
-                          <Scatterplot />
-                        )}
-                        <PanelEmbedding />
+                        <div
+                          style={{
+                            flex: 1,
+                            position: "relative",
+                          }}
+                        >
+                          <Graph
+                            viewportRef={viewportRef}
+                            key={graphRenderCounter}
+                          />
+                          {scatterplotXXaccessor && scatterplotYYaccessor && (
+                            <Scatterplot />
+                          )}
+                          <PanelEmbedding />
+                        </div>
                         <Controls bottom={0}>
                           <DatasetSelector />
                         </Controls>
-                      </>
+                      </div>
                     )}
                   >
                     <LeftSideBar />
diff --git a/client/src/reducers/index.ts b/client/src/reducers/index.ts
index 028ca0307..1a27661ef 100644
--- a/client/src/reducers/index.ts
+++ b/client/src/reducers/index.ts
@@ -84,7 +84,8 @@ const RootReducer: Reducer = (state: RootState, action: Action) => {
 
 const store = createStore(RootReducer, applyMiddleware(thunk, annoMatrixGC));
 
-export type RootState = {
+export interface RootState {
+  actionCount: number;
   config: ReturnType<typeof config>;
   annoMatrix: ReturnType<typeof annoMatrix>;
   obsCrossfilter: ReturnType<typeof obsCrossfilter>;
@@ -104,7 +105,7 @@ export type RootState = {
   pointDilation: ReturnType<typeof pointDilation>;
   datasetMetadata: ReturnType<typeof datasetMetadata>;
   showBottomBanner: ReturnType<typeof showBottomBanner>;
-};
+}
 
 export type AppDispatch = ThunkDispatch<RootState, never, AnyAction>;
 
diff --git a/client/src/reducers/undoable.ts b/client/src/reducers/undoable.ts
index 225b958eb..997aed497 100644
--- a/client/src/reducers/undoable.ts
+++ b/client/src/reducers/undoable.ts
@@ -12,10 +12,11 @@ Requires three parameters:
       See below for details.
     * debug: if truish, will print helpful log messages about history manipulation
 
-This meta reducer accepts three actions types:
+This meta reducer accepts four actions types:
 * @@undoable/undo - move back in history
 * @@undoable/redo - move forward in history
 * @@undoable/clear - clear history
+* @@undoable/revert-to-action - revert to a specific action count
 
 ---
 
@@ -87,6 +88,7 @@ export interface UndoableState<FilterStateType extends UndoableFilterState> {
   [futureKey]: [string, unknown][][];
   [pendingKey]: [string, unknown][] | null;
   [filterStateKey]: FilterStateType | undefined;
+  actionCount: number;
 }
 
 const Undoable = <FilterStateType extends UndoableFilterState>(
@@ -126,6 +128,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       [pastKey]: newPast,
       [futureKey]: newFuture,
       [pendingKey]: null,
+      actionCount: currentState.actionCount - 1,
     };
     return nextState;
   }
@@ -151,6 +154,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       [pastKey]: newPast,
       [futureKey]: newFuture,
       [pendingKey]: null,
+      actionCount: currentState.actionCount + 1,
     };
     return nextState;
   }
@@ -167,6 +171,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       [futureKey]: [],
       [filterStateKey]: undefined,
       [pendingKey]: null,
+      actionCount: 0,
     };
   }
 
@@ -188,6 +193,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       [futureKey]: future,
       [filterStateKey]: filterState,
       [pendingKey]: pending,
+      actionCount: currentState.actionCount,
     };
   }
 
@@ -211,6 +217,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       [futureKey]: [],
       [filterStateKey]: filterState,
       [pendingKey]: null,
+      actionCount: (currentState.actionCount || 0) + 1,
     };
     return nextState;
   }
@@ -227,6 +234,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
     return {
       ...currentState,
       [pendingKey]: currentUndoableState,
+      actionCount: currentState.actionCount,
     };
   }
 
@@ -239,6 +247,7 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
     return {
       ...currentState,
       [pendingKey]: null,
+      actionCount: currentState.actionCount,
     };
   }
 
@@ -257,20 +266,57 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       [pastKey]: newPast,
       [futureKey]: [],
       [pendingKey]: null,
+      actionCount: (currentState.actionCount || 0) + 1,
     };
     return nextState;
   }
 
+  /*
+  Revert to a specific action count
+  */
+  function revertToAction(
+    currentState: UndoableState<FilterStateType>,
+    targetCount: number
+  ): UndoableState<FilterStateType> {
+    const past = currentState[pastKey];
+    const currentCount = currentState.actionCount || 0;
+
+    if (targetCount >= currentCount) return currentState;
+
+    // Calculate how many steps we need to go back
+    const stepsBack = currentCount - targetCount;
+
+    // Get the state at that point
+    const targetState = past[past.length - stepsBack] || [];
+
+    // Store everything after this point in the future stack
+    const newFuture = [
+      ...past.slice(past.length - stepsBack + 1),
+      Object.entries(currentState).filter((kv) => undoableKeysSet.has(kv[0])),
+    ];
+
+    return {
+      ...currentState,
+      ...fromEntries(targetState),
+      [pastKey]: past.slice(0, past.length - stepsBack),
+      [futureKey]: newFuture,
+      [pendingKey]: null,
+      actionCount: targetCount,
+    };
+  }
+
   return (
     currentState: UndoableState<FilterStateType> = {
       [pastKey]: [],
       [futureKey]: [],
       [filterStateKey]: undefined,
       [pendingKey]: null,
+      actionCount: 0,
     },
     action: AnyAction
   ) => {
-    if (debug > 1) console.log("---- ACTION", action.type);
+    if (debug && typeof debug === "number" && debug > 1)
+      console.log("---- ACTION", action.type);
     const aType = action.type;
     switch (aType) {
       case "@@undoable/undo": {
@@ -282,7 +328,14 @@ const Undoable = <FilterStateType extends UndoableFilterState>(
       }
 
       case "@@undoable/clear": {
-        return clear(currentState);
+        return {
+          ...clear(currentState),
+          actionCount: 0,
+        };
+      }
+
+      case "@@undoable/revert-to-action": {
+        return revertToAction(currentState, action.targetCount);
       }
 
       default: {
diff --git a/client/src/reducers/undoableConfig.ts b/client/src/reducers/undoableConfig.ts
index 5c1cdf831..cbc72ae04 100644
--- a/client/src/reducers/undoableConfig.ts
+++ b/client/src/reducers/undoableConfig.ts
@@ -28,8 +28,6 @@ const skipOnActions = new Set<string>([
   "graph brush change",
   "continuous metadata histogram brush",
 
-  "request user defined gene success",
-
   "category value mouse hover start",
   "category value mouse hover end",
 
@@ -56,6 +54,11 @@ const skipOnActions = new Set<string>([
   /* geneInfo actions */
   "minimize/maximize gene info",
   "open gene info",
+
+  "single user defined gene start",
+  "single user defined gene complete",
+  "type continuous metadata histogram start",
+  "type continuous metadata histogram brush",
 ]);
 
 /*
@@ -120,6 +123,9 @@ const saveOnActions = new Set<string>([
   /* geneInfo actions */
   "load gene info",
   "clear gene info",
+
+  "type continuous metadata histogram end",
+  "request user defined gene success",
 ]);
 
 /**
diff --git a/client/src/util/featureFlags/features.ts b/client/src/util/featureFlags/features.ts
index cf27f073a..5ad36e95c 100644
--- a/client/src/util/featureFlags/features.ts
+++ b/client/src/util/featureFlags/features.ts
@@ -1,3 +1,4 @@
 export enum FEATURES {
   TEST = "test",
+  AGENT = "agent",
 }
diff --git a/package-lock.json b/package-lock.json
new file mode 100644
index 000000000..231968dcb
--- /dev/null
+++ b/package-lock.json
@@ -0,0 +1,99 @@
+{
+  "name": "single-cell-explorer",
+  "lockfileVersion": 3,
+  "requires": true,
+  "packages": {
+    "": {
+      "dependencies": {
+        "react-draggable": "^4.4.5"
+      }
+    },
+    "node_modules/clsx": {
+      "version": "1.2.1",
+      "resolved": "https://registry.npmjs.org/clsx/-/clsx-1.2.1.tgz",
+      "integrity": "sha512-EcR6r5a8bj6pu3ycsa/E/cKVGuTgZJZdsyUYHOksG/UHIiKfjxzRxYJpyVBwYaQeOvghal9fcc4PidlgzugAQg==",
+      "engines": {
+        "node": ">=6"
+      }
+    },
+    "node_modules/js-tokens": {
+      "version": "4.0.0",
+      "resolved": "https://registry.npmjs.org/js-tokens/-/js-tokens-4.0.0.tgz",
+      "integrity": "sha512-RdJUflcE3cUzKiMqQgsCu06FPu9UdIJO0beYbPhHN4k6apgJtifcoCtT9bcxOpYBtpD2kCM6Sbzg4CausW/PKQ=="
+    },
+    "node_modules/loose-envify": {
+      "version": "1.4.0",
+      "resolved": "https://registry.npmjs.org/loose-envify/-/loose-envify-1.4.0.tgz",
+      "integrity": "sha512-lyuxPGr/Wfhrlem2CL/UcnUc1zcqKAImBDzukY7Y5F/yQiNdko6+fRLevlw1HgMySw7f611UIY408EtxRSoK3Q==",
+      "dependencies": {
+        "js-tokens": "^3.0.0 || ^4.0.0"
+      },
+      "bin": {
+        "loose-envify": "cli.js"
+      }
+    },
+    "node_modules/object-assign": {
+      "version": "4.1.1",
+      "resolved": "https://registry.npmjs.org/object-assign/-/object-assign-4.1.1.tgz",
+      "integrity": "sha512-rJgTQnkUnH1sFw8yT6VSU3zD3sWmu6sZhIseY8VX+GRu3P6F7Fu+JNDoXfklElbLJSnc3FUQHVe4cU5hj+BcUg==",
+      "engines": {
+        "node": ">=0.10.0"
+      }
+    },
+    "node_modules/prop-types": {
+      "version": "15.8.1",
+      "resolved": "https://registry.npmjs.org/prop-types/-/prop-types-15.8.1.tgz",
+      "integrity": "sha512-oj87CgZICdulUohogVAR7AjlC0327U4el4L6eAvOqCeudMDVU0NThNaV+b9Df4dXgSP1gXMTnPdhfe/2qDH5cg==",
+      "dependencies": {
+        "loose-envify": "^1.4.0",
+        "object-assign": "^4.1.1",
+        "react-is": "^16.13.1"
+      }
+    },
+    "node_modules/react": {
+      "version": "19.0.0",
+      "resolved": "https://registry.npmjs.org/react/-/react-19.0.0.tgz",
+      "integrity": "sha512-V8AVnmPIICiWpGfm6GLzCR/W5FXLchHop40W4nXBmdlEceh16rCN8O8LNWm5bh5XUX91fh7KpA+W0TgMKmgTpQ==",
+      "peer": true,
+      "engines": {
+        "node": ">=0.10.0"
+      }
+    },
+    "node_modules/react-dom": {
+      "version": "19.0.0",
+      "resolved": "https://registry.npmjs.org/react-dom/-/react-dom-19.0.0.tgz",
+      "integrity": "sha512-4GV5sHFG0e/0AD4X+ySy6UJd3jVl1iNsNHdpad0qhABJ11twS3TTBnseqsKurKcsNqCEFeGL3uLpVChpIO3QfQ==",
+      "peer": true,
+      "dependencies": {
+        "scheduler": "^0.25.0"
+      },
+      "peerDependencies": {
+        "react": "^19.0.0"
+      }
+    },
+    "node_modules/react-draggable": {
+      "version": "4.4.5",
+      "resolved": "https://registry.npmjs.org/react-draggable/-/react-draggable-4.4.5.tgz",
+      "integrity": "sha512-OMHzJdyJbYTZo4uQE393fHcqqPYsEtkjfMgvCHr6rejT+Ezn4OZbNyGH50vv+SunC1RMvwOTSWkEODQLzw1M9g==",
+      "dependencies": {
+        "clsx": "^1.1.1",
+        "prop-types": "^15.8.1"
+      },
+      "peerDependencies": {
+        "react": ">= 16.3.0",
+        "react-dom": ">= 16.3.0"
+      }
+    },
+    "node_modules/react-is": {
+      "version": "16.13.1",
+      "resolved": "https://registry.npmjs.org/react-is/-/react-is-16.13.1.tgz",
+      "integrity": "sha512-24e6ynE2H+OKt4kqsOvNd8kBpV65zoxbA4BVsEOB3ARVWQki/DHzaUoC5KuON/BiccDaCCTZBuOcfZs70kR8bQ=="
+    },
+    "node_modules/scheduler": {
+      "version": "0.25.0",
+      "resolved": "https://registry.npmjs.org/scheduler/-/scheduler-0.25.0.tgz",
+      "integrity": "sha512-xFVuu11jh+xcO7JOAGJNOXld8/TcEHK/4CituBUeUb5hqxJLj9YuemAEuvm9gQ/+pgXYfbQuqAkiYu+u7YEsNA==",
+      "peer": true
+    }
+  }
+}
diff --git a/package.json b/package.json
new file mode 100644
index 000000000..c721c9aa8
--- /dev/null
+++ b/package.json
@@ -0,0 +1,5 @@
+{
+  "dependencies": {
+    "react-draggable": "^4.4.5"
+  }
+}
diff --git a/server/app/api/v3.py b/server/app/api/v3.py
index b3a093239..80ed72511 100644
--- a/server/app/api/v3.py
+++ b/server/app/api/v3.py
@@ -11,6 +11,7 @@
 )
 from flask_restful import Api, Resource
 
+import server.common.agent as common_agent
 import server.common.rest as common_rest
 from server.app.api.util import get_data_adaptor, get_dataset_artifact_s3_uri
 from server.common.constants import CELLGUIDE_CXG_KEY_NAME
@@ -177,6 +178,14 @@ class UnsMetaAPI(DatasetResource):
     def get(self, data_adaptor):
         return common_rest.uns_metadata_get(request, data_adaptor)
 
+    # Add agent endpoint
+
+
+class AgentAPI(S3URIResource):  # Inherit from S3URIResource instead of Resource
+    @rest_get_s3uri_data_adaptor
+    def post(self, data_adaptor):
+        return common_agent.agent_step_post(request, data_adaptor)
+
 
 def rest_get_dataset_explorer_location_data_adaptor(func):
     @wraps(func)
@@ -249,6 +258,7 @@ def add_resource(resource, url):
     add_resource(DiffExpObs2API, "/diffexp/obs2")
     add_resource(LayoutObsAPI, "/layout/obs")
     add_resource(UnsMetaAPI, "/uns/meta")
+    add_resource(AgentAPI, "/agent/step")
     return api
 
 
@@ -300,3 +310,11 @@ def register_api_v3(app, app_config, api_url_prefix):
             view_func=lambda dataset, filename: send_from_directory("../common/web/static", filename),
             methods=["GET"],
         )
+
+        # Add agent endpoint for each dataroot
+        app.add_url_rule(
+            f"{api_url_prefix}/{url_dataroot}/<string:dataset>/api/v0.3/agent/step",
+            f"agent_step_{url_dataroot}",
+            view_func=lambda: common_agent.agent_step_post(request),
+            methods=["POST"],
+        )
diff --git a/server/common/agent.py b/server/common/agent.py
new file mode 100644
index 000000000..5fd62c5b8
--- /dev/null
+++ b/server/common/agent.py
@@ -0,0 +1,170 @@
+import logging
+import sys
+from http import HTTPStatus
+from typing import List, Literal, Optional
+
+from flask import abort, current_app, jsonify, make_response
+from langchain.agents import create_openai_tools_agent
+from langchain.agents.output_parsers.tools import ToolAgentAction
+from langchain.prompts import ChatPromptTemplate, MessagesPlaceholder
+from langchain.schema import AIMessage, FunctionMessage, HumanMessage
+from langchain_core.agents import AgentFinish
+from langchain_openai import ChatOpenAI
+from pydantic import BaseModel
+
+from server.common.openai_utils import get_cached_openai_api_key
+from server.common.tools import create_tools
+
+
+class AgentMessage(BaseModel):
+    role: Literal["user", "assistant", "function"]
+    content: str
+    name: Optional[str] = None
+    type: Literal["summary", "tool", "message"] = "message"
+
+
+def get_system_prompt() -> str:
+    """Create the system prompt string"""
+    return """You are an assistant that helps users control an interface for visualizing single-cell data. Your primary task is to respond with the appropriate tool call and its input. The client will execute the tool and return to you for the next steps.
+
+Guidelines:
+
+- When an execution workflow is complete (i.e. there are no more steps to be taken), use the no_more_steps tool.
+- Execute ONE action at a time and wait for user input
+- Be concise in your responses - avoid listing all possible next actions unless specifically asked
+- Process all requested actions until complete
+- If a tool requires additional information, invoke it to get the needed information
+- If asked about capabilities, list the available tools
+- Do not perform subsetting unless specifically requested
+- Assist only with queries related to single-cell data analysis and visualization
+
+Concepts:
+
+- **Subsetting**: Filtering the data to only the currently selected or highlighted data points.
+- **Selection**: Highlighting a subset of data points based on categorical or continuous data. For continuous data, selections use histograms in the UI to select value ranges.
+- **Coloring**: Applying colors to data points based on a specific feature.
+- **Expanding**: Displaying more information about a particular feature.
+
+Terminology:
+
+- **Genesets**: Collections of genes curated by the user.
+- **Genes**: Individual genes curated by the user.
+- **Metadata**: Any other information about the data points that is not a gene or geneset."""
+
+
+def get_prompt_template() -> ChatPromptTemplate:
+    """Create the chat prompt template"""
+    return ChatPromptTemplate.from_messages(
+        [
+            ("system", get_system_prompt()),
+            (
+                "system",
+                "The following conversation history provides context. Use it to understand references and previous actions, but do not re-execute completed workflows unless specifically requested:",
+            ),
+            MessagesPlaceholder(variable_name="chat_history", optional=True),
+            (
+                "system",
+                "Now focus on the current request. When an execution workflow is complete, use the no_more_steps tool.",
+            ),
+            AIMessage(content="<start_summary/>"),
+            MessagesPlaceholder(variable_name="input"),
+            MessagesPlaceholder(variable_name="agent_scratchpad"),
+        ]
+    )
+
+
+def agent_step_post(request, data_adaptor):
+    """Handle agent step requests"""
+    try:
+        data = request.get_json()
+        messages: List[AgentMessage] = [AgentMessage(**msg) for msg in data["messages"]]
+
+        # Convert messages to LangChain format
+        formatted_messages = []
+        for msg in messages:
+            if msg.role == "user":
+                formatted_messages.append(HumanMessage(content=msg.content))
+            elif msg.role == "assistant":
+                formatted_messages.append(AIMessage(content=msg.content))
+            elif msg.role == "function":
+                formatted_messages.append(FunctionMessage(content=msg.content, name=msg.name or "function"))
+
+        # Find index of last summary message
+        last_summary_idx = -1
+        for i in range(len(messages) - 1, -1, -1):
+            if messages[i].type == "summary":
+                last_summary_idx = i
+                break
+
+        # Split messages into chat history and current request
+        chat_history = formatted_messages[: last_summary_idx + 1]
+        current_request = formatted_messages[last_summary_idx + 1 :]
+        print("chat_history:")
+        for msg in chat_history:
+            print(f"  {msg}")
+        print("current_request:")
+        for msg in current_request:
+            print(f"  {msg}")
+        # Initialize LLM and create agent with data_adaptor-aware tools
+
+        api_key = get_cached_openai_api_key()
+        llm = ChatOpenAI(temperature=0, model_name="gpt-4o", api_key=api_key)
+        tools = create_tools(data_adaptor)
+        agent = create_openai_tools_agent(llm, tools, get_prompt_template())
+        # Get structured response with split history
+        next_step = agent.invoke(
+            {
+                "input": current_request,
+                "chat_history": chat_history,
+                "intermediate_steps": [],
+            }
+        )
+
+        response = {}
+        if isinstance(next_step, AgentFinish):
+            # Remove start summary tag from output
+            response = {
+                "type": "message",
+                "content": next_step.return_values["output"],
+            }
+        elif isinstance(next_step, list) and isinstance(next_step[0], ToolAgentAction):
+            tool_action = next_step[0]
+            if tool_action.tool == "no_more_steps":
+                response = {"type": "summary", "content": tool_action.tool_input["summary"]}
+            else:
+                # Find the matching tool
+                selected_tool = next(tool for tool in tools if tool.name == tool_action.tool)
+
+                # Execute the tool with its arguments
+                # If the tool input is a string, then there is no argument schema and so we have no arguments.
+                tool_arguments = {} if isinstance(tool_action.tool_input, str) else tool_action.tool_input
+
+                try:
+                    # Execute the tool and get results
+                    tool_result = selected_tool.func(**tool_arguments)
+
+                    response = {
+                        "type": "tool",
+                        "tool": {"name": tool_action.tool, "result": tool_result},
+                    }
+                except Exception as tool_error:
+                    # Handle tool execution errors
+                    error_message = f"Error executing tool {tool_action.tool}: {str(tool_error)}"
+                    current_app.logger.error(error_message, exc_info=True)
+                    return abort_and_log(HTTPStatus.INTERNAL_SERVER_ERROR, error_message, loglevel=logging.ERROR)
+        else:
+            raise ValueError(f"Unknown agent step type: {type(next_step)}")
+
+        return make_response(jsonify(response), HTTPStatus.OK)
+
+    except Exception as e:
+        return abort_and_log(HTTPStatus.INTERNAL_SERVER_ERROR, str(e), loglevel=logging.ERROR)
+
+
+def abort_and_log(code, logmsg, loglevel=logging.DEBUG):
+    """Log the message, then abort with HTTP code"""
+    print("ABORTING")
+    exc_info = sys.exc_info()
+    print(exc_info)
+    current_app.logger.log(loglevel, logmsg, exc_info=exc_info)
+    return abort(code)
diff --git a/server/common/config/config_model.py b/server/common/config/config_model.py
index c035e8e3c..810e75b40 100644
--- a/server/common/config/config_model.py
+++ b/server/common/config/config_model.py
@@ -13,7 +13,7 @@
 from typing import Dict, List, Optional, Union
 from urllib.parse import quote_plus
 
-from pydantic import BaseModel, Extra, Field, root_validator, validator
+from pydantic.v1 import BaseModel, Extra, Field, root_validator, validator
 
 from server.common.utils.data_locator import discover_s3_region_name
 from server.common.utils.utils import custom_format_warning, find_available_port, is_port_available
diff --git a/server/common/openai_utils.py b/server/common/openai_utils.py
new file mode 100644
index 000000000..c5f7c367c
--- /dev/null
+++ b/server/common/openai_utils.py
@@ -0,0 +1,19 @@
+import os
+
+from flask import current_app
+
+from server.common.utils.aws_secret_utils import get_secret_key
+
+
+def get_openai_api_key():
+    deployment_stage = os.getenv("DEPLOYMENT_STAGE", "test")
+    if deployment_stage == "test":
+        return os.getenv("OPENAI_API_KEY")
+    return get_secret_key(f"{deployment_stage}/explorer/agent", region_name="us-west-2")["OPENAI_API_KEY"]
+
+
+def get_cached_openai_api_key():
+    """Get OpenAI API key from cache or fetch it if not cached"""
+    if not hasattr(current_app, "openai_api_key"):
+        current_app.openai_api_key = get_openai_api_key()
+    return current_app.openai_api_key
diff --git a/server/common/tools.py b/server/common/tools.py
new file mode 100644
index 000000000..cc98b6b2a
--- /dev/null
+++ b/server/common/tools.py
@@ -0,0 +1,411 @@
+from enum import Enum
+from functools import partial
+from typing import Annotated, List, Type, TypeVar
+
+from langchain_core.tools import Tool
+from langchain_openai import ChatOpenAI
+from pydantic import BaseModel, Field
+
+from server.common.openai_utils import get_cached_openai_api_key
+
+
+class ColorByGeneSchema(BaseModel):
+    gene: Annotated[
+        str,
+        Field(
+            description="The gene symbol to color the visualization by. This should be a valid gene symbol (e.g., CD4, IL2, etc.)."
+        ),
+    ]
+
+
+class SummarySchema(BaseModel):
+    summary: Annotated[
+        str,
+        Field(
+            description="A summary of the actions taken in this workflow execution after the <start_summary/> tag in a concise manner to the user."
+        ),
+    ]
+
+
+class HistogramType(Enum):
+    METADATA = "metadata"
+    GENE = "gene"
+    GENESET = "geneset"
+
+
+class HistogramSelectionSchema(BaseModel):
+    range_low: Annotated[
+        float,
+        Field(description="The low end of the range to select. If not provided, the tool will set the low end to 0."),
+    ]
+    range_high: Annotated[
+        float | None,
+        Field(
+            description="The high end of the range to select. If not provided, the tool will set the high end to None."
+        ),
+    ]
+    histogram_type: Annotated[
+        HistogramType,
+        Field(
+            description="The type of histogram to select - gene, geneset, or metadata. IMPORTANT: GENES MUST BE GENE SYMBOLS."
+        ),
+    ]
+    available_genesets: Annotated[
+        List[str] | None,
+        Field(description="The list of available genesets to select from. Only used if the histogram type is geneset."),
+    ]
+    histogram_name: Annotated[
+        str,
+        Field(
+            description="The name of the histogram to select. This can be a metadata column name, gene, or geneset name. IMPORTANT: GENES MUST BE GENE SYMBOLS."
+        ),
+    ]
+
+
+class ColorByGenesetSchema(BaseModel):
+    geneset: Annotated[
+        str,
+        Field(description="The name of the geneset to color the visualization by."),
+    ]
+    available_genesets: Annotated[
+        List[str] | None,
+        Field(description="The list of available genesets to color the visualization by."),
+    ]
+
+
+class ExpandGeneSchema(BaseModel):
+    gene: Annotated[
+        str,
+        Field(description="The gene symbol to expand."),
+    ]
+
+
+class CreateGenesetSchema(BaseModel):
+    geneset_name: Annotated[
+        str,
+        Field(description="The name of the geneset to create."),
+    ]
+    geneset_description: Annotated[
+        str,
+        Field(
+            description="The description of the geneset to create. If not provided by the user, the tool will set the description to an empty string."
+        ),
+    ]
+    genes_to_populate_geneset: Annotated[
+        List[str],
+        Field(
+            description="The genes to populate the geneset with. If not provided by the user, the tool will set the genes to an empty list."
+        ),
+    ]
+
+
+class CategoricalSelectionSchema(BaseModel):
+    category_value: Annotated[
+        str,
+        Field(description="The category a user wishes to perform selection on."),
+    ]
+    column_name: Annotated[
+        str | None,
+        Field(
+            description="The column name that the category value belongs to. If not provided, the tool will attempt to infer the column name from the category value.",
+            default=None,
+        ),
+    ]
+
+
+class ExpandCategorySchema(BaseModel):
+    category_name: Annotated[
+        str,
+        Field(description="The name of the category to expand."),
+    ]
+
+
+class MetadataColorBySchema(BaseModel):
+    metadata_name: Annotated[
+        str,
+        Field(description="The name of the metadata to color the visualization by."),
+    ]
+
+
+def subset():
+    return {"status": "success"}
+
+
+def unsubset():
+    return {"status": "success"}
+
+
+def select_category(data_adaptor, category_value: str, column_name: str | None = None):
+    schema = data_adaptor.get_schema()
+
+    prompt = "IMPORTANT: Be flexible with matching - for example, 'B cells' should match 'B cell', plurals should match singular forms, and common variations should be recognized. Only return an error if there is no conceptually matching category.\n"
+    prompt += "IMPORTANT: You must return the exact category value from the dataset, not the user's input value.\n"
+    prompt += f"The category value the user wishes to perform selection on is: {category_value}.\n"
+    if column_name is not None:
+        prompt += f"The column name that the category value belongs to is: {column_name}.\n"
+    cols = [i for i in schema["annotations"]["obs"]["columns"] if "categories" in i]
+    prompt += f"The valid categorical metadata labels are: {cols}.\n"
+    prompt += "Please select one of the valid category labels along with the name of the column that most closely matches the user's request."
+
+    class CategorySelectionSchema(BaseModel):
+        category_value: str
+        column_name: str
+        error: str | None = None
+
+    return call_llm_with_structured_output(prompt, CategorySelectionSchema)
+
+
+def histogram_selection(
+    data_adaptor,
+    histogram_name: str,
+    histogram_type: HistogramType,
+    range_low: float,
+    range_high: float | None = None,
+    available_genesets: List[str] | None = None,
+):
+    if histogram_type == HistogramType.GENESET.value:
+        if available_genesets is None:
+            return {
+                "histogram_type": histogram_type,
+                "status": "need_available_genesets",
+            }
+        prompt = f"The geneset the user wishes to perform histogram selection on is: {histogram_name}."
+        prompt += f"The available genesets are: {available_genesets}."
+        prompt += "Please select one of the available genesets to perform histogram selection on."
+
+        class GenesetSelectionSchema(BaseModel):
+            geneset: str
+
+        return {
+            "histogram_name": call_llm_with_structured_output(prompt, GenesetSelectionSchema)["geneset"],
+            "histogram_type": histogram_type,
+            "range_low": range_low,
+            "range_high": range_high,
+        }
+    elif histogram_type == HistogramType.METADATA.value:
+        schema = data_adaptor.get_schema()
+        prompt = f"The metadata name the user wishes to perform histogram selection on is: {histogram_name}."
+        cols = [i["name"] for i in schema["annotations"]["obs"]["columns"] if "categories" not in i and i != "name_0"]
+        prompt += f"The valid metadata columns are: {cols}. Please select one of the column names to perform histogram selection on."
+        prompt += "Metadata can be categorical or continuous. Please only select one of the continuous columns to perform histogram selection on."
+
+        class MetadataSelectionSchema(BaseModel):
+            metadata_name: str
+
+        response = {
+            "histogram_name": call_llm_with_structured_output(prompt, MetadataSelectionSchema)["metadata_name"],
+            "histogram_type": histogram_type,
+            "range_low": range_low,
+            "range_high": range_high,
+        }
+        print(response)
+        return response
+    elif histogram_type == HistogramType.GENE.value:
+        return {
+            "histogram_name": histogram_name.upper(),
+            "histogram_type": histogram_type,
+            "range_low": range_low,
+            "range_high": range_high,
+        }
+
+
+def panning():
+    return {"status": "success"}
+
+
+def zoom_in():
+    return {"status": "success"}
+
+
+def zoom_out():
+    return {"status": "success"}
+
+
+def color_by_gene(gene: str):
+    return {
+        "gene": gene.upper(),
+    }
+
+
+def expand_gene(gene: str):
+    return {
+        "gene": gene.upper(),
+    }
+
+
+def color_by_geneset(geneset: str, available_genesets: List[str] | None = None):
+    if available_genesets is None:
+        return {
+            "status": "need_available_genesets",
+        }
+
+    prompt = f"The geneset the user wishes to color by is: {geneset}."
+    prompt += f"The available genesets are: {available_genesets}."
+    prompt += "Please select one of the available genesets to color by."
+
+    class GenesetSelectionSchema(BaseModel):
+        geneset: str
+
+    return call_llm_with_structured_output(prompt, GenesetSelectionSchema)
+
+
+def color_by_metadata(data_adaptor, metadata_name: str):
+    schema = data_adaptor.get_schema()
+    prompt = "IMPORTANT: Be flexible with matching - for example, 'cell types' should match 'cell_type', plurals should match singular forms, and common variations should be recognized. Only return an error if there is no conceptually matching metadata.\n"
+    prompt += "IMPORTANT: You must return the exact metadata name from the dataset, not the user's input value.\n"
+    prompt += f"The metadata name the user wishes to color by is: {metadata_name}.\n"
+    cols = [i["name"] for i in schema["annotations"]["obs"]["columns"]]
+    prompt += f"The valid metadata columns are: {cols}.\n"
+    prompt += "Please select one of the valid metadata columns that most closely matches the user's request."
+
+    class MetadataSelectionSchema(BaseModel):
+        metadata_name: str
+        error: str | None = None
+
+    return call_llm_with_structured_output(prompt, MetadataSelectionSchema)
+
+
+def create_geneset(geneset_name: str, geneset_description: str, genes_to_populate_geneset: List[str]):
+    return {
+        "geneset_name": geneset_name,
+        "geneset_description": geneset_description,
+        "genes_to_populate_geneset": [i.upper() for i in genes_to_populate_geneset],
+    }
+
+
+def expand_category(data_adaptor, category_name: str):
+    schema = data_adaptor.get_schema()
+    prompt = f"The category name the user wishes to perform expand by is: {category_name}."
+    categorical_cols = [i["name"] for i in schema["annotations"]["obs"]["columns"] if "categories" in i]
+    prompt += f"The valid categorical metadata columns are: {categorical_cols}."
+    prompt += "Please select one of the valid categorical metadata columns to expand by."
+
+    class CategorySelectionSchema(BaseModel):
+        category_name: str
+
+    return call_llm_with_structured_output(prompt, CategorySelectionSchema)
+
+
+def xy_scatterplot():
+    return {"status": "success"}
+
+
+def show_cell_guide():
+    return {"status": "success"}
+
+
+def show_gene_card():
+    return {"status": "success"}
+
+
+def no_more_steps(summary: str):
+    return {"status": "no_more_steps", "summary": summary}
+
+
+T = TypeVar("T", bound=BaseModel)
+
+
+def call_llm_with_structured_output(query: str, schema: Type[T]) -> T:
+    api_key = get_cached_openai_api_key()
+    llm = ChatOpenAI(temperature=0, model_name="gpt-4o", api_key=api_key).with_structured_output(schema)
+    return llm.invoke(query).model_dump()
+
+
+def create_tools(data_adaptor):
+    return [
+        # TODO, FIXME: This is still summarizing actions that were already taken.
+        Tool(
+            name="no_more_steps",
+            description="When a workflow is complete, use this tool to summarize ONLY the actions taken after the <start_summary/> tag. Use the conversation history before this tag for context, but do not summarize previous actions.",
+            func=no_more_steps,
+            args_schema=SummarySchema,
+        ),
+        Tool(
+            name="subset",
+            description="Filter dataset to show only currently selected data points",
+            func=subset,
+        ),
+        Tool(
+            name="unsubset",
+            description="Reset the current subset and return to the full dataset",
+            func=unsubset,
+        ),
+        Tool(
+            name="categorical_selection",
+            description="Highlight data points matching a specific category value (does not filter/subset the data)",
+            func=partial(select_category, data_adaptor),
+            args_schema=CategoricalSelectionSchema,
+        ),
+        Tool(
+            name="histogram_selection",
+            description="Perform a histogram selection. For geneset histograms, returns a flag if available genesets aren't provided, expecting them in a subsequent call.",
+            func=partial(histogram_selection, data_adaptor),
+            args_schema=HistogramSelectionSchema,
+        ),
+        Tool(
+            name="color_by_gene",
+            description="Color the visualization by gene expression",
+            func=color_by_gene,
+            args_schema=ColorByGeneSchema,
+        ),
+        Tool(
+            name="expand_gene",
+            description="Expand the gene element to show more information about the gene",
+            func=expand_gene,
+            args_schema=ExpandGeneSchema,
+        ),
+        Tool(
+            name="color_by_geneset",
+            description="Color by average expression of a geneset. Returns a flag if available genesets aren't provided, expecting them in a subsequent call.",
+            func=color_by_geneset,
+            args_schema=ColorByGenesetSchema,
+        ),
+        Tool(
+            name="color_by_metadata",
+            description="Color the visualization by metadata",
+            func=partial(color_by_metadata, data_adaptor),
+            args_schema=MetadataColorBySchema,
+        ),
+        Tool(
+            name="expand_category",
+            description="Expand the category element to show more information about the category",
+            func=partial(expand_category, data_adaptor),
+            args_schema=ExpandCategorySchema,
+        ),
+        Tool(
+            name="create_geneset",
+            description="Create a new geneset",
+            func=create_geneset,
+            args_schema=CreateGenesetSchema,
+        ),
+        # Tool(
+        #     name="xy_scatterplot",
+        #     description="Create an XY scatterplot",
+        #     func=xy_scatterplot,
+        # ),
+        # Tool(
+        #     name="show_cell_guide",
+        #     description="Show the cell guide",
+        #     func=show_cell_guide,
+        # ),
+        # Tool(
+        #     name="show_gene_card",
+        #     description="Show the gene card",
+        #     func=show_gene_card,
+        # ),
+        # Tool(
+        #     name="panning",
+        #     description="Perform panning on the current view",
+        #     func=panning,
+        # ),
+        # Tool(
+        #     name="zoom_in",
+        #     description="Zoom in on the current view",
+        #     func=zoom_in,
+        # ),
+        # Tool(
+        #     name="zoom_out",
+        #     description="Zoom out on the current view",
+        #     func=zoom_out,
+        # ),
+    ]
diff --git a/server/common/utils/aws_secret_utils.py b/server/common/utils/aws_secret_utils.py
index 73c508b14..411de3e48 100644
--- a/server/common/utils/aws_secret_utils.py
+++ b/server/common/utils/aws_secret_utils.py
@@ -6,7 +6,7 @@
 from server.common.errors import SecretKeyRetrievalError  # type: ignore
 
 
-def get_secret_key(region_name, secret_name):  # type: ignore
+def get_secret_key(secret_name, region_name="us-west-2"):  # type: ignore
     session = boto3.session.Session()
     client = session.client(service_name="secretsmanager", region_name=region_name)
 
diff --git a/server/requirements.txt b/server/requirements.txt
index 0bf98747a..09974c32e 100644
--- a/server/requirements.txt
+++ b/server/requirements.txt
@@ -15,7 +15,7 @@ gunicorn[gevent]==20.0.4
 numba==0.60.0
 numpy>=1.24.0,<2.1.0
 pandas>=2.2.2
-pydantic==1.10.13
+pydantic==2.9.2
 requests==2.32.3
 scipy==1.14.1
 flask-server-timing==0.1.2
@@ -23,3 +23,6 @@ s3fs==0.4.2
 tiledb # unpinned to match Portal's requirements
 Werkzeug==3.0.6
 python-json-logger==2.0.7
+langchain
+langchain-openai
+