This repository contains solution to Kaggle competition "Personalized Medicine: Redefining Cancer Treatment" by Taiwan AI Labs
- Python 3.4 or above
- virtualenv
- required packages are listed in requirements.txt
Detailed description can be found in description.pdf
After cloning this repository, we recommend setting up a python virtual environment
virtualenv kaggle
Remember to activate the virtual environment before running
source kaggle/bin/activate
Before running the experiments, please run preprocess.sh to install required python packages
bash preprocess.sh
We need nltk tokenizers, so please download it manually by
python3 -m nltk.downloader -d $PATH_TO_YOUR_HOME/nltk_data punkt
For running all the experiments, simply use run.sh:
bash run.sh
run.sh will run pretrain.py and then train.py.
After a successful run, you should find two submission files placed in result/ directory.