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"Vcf" perl module changed name to VCF #37

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ericcrandall opened this issue Dec 21, 2021 · 0 comments
Open

"Vcf" perl module changed name to VCF #37

ericcrandall opened this issue Dec 21, 2021 · 0 comments

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@ericcrandall
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The package has changed its name, which has broken this script. I went through the code and fixed 3 instances where I thought it was referring to the Vcf Module. Nevertheless, when I try to run this script I get the following error:

usage: GLOB->new() at ./rad_haplotyper.pl line 202.

This has something to do with the VCF package name change I think, but I'm stuck. I've tried using the manual cpan install as well as the conda environment. Both give the same error.

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