Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Remove hardcoded nextflow.config paths #95

Open
azmigueldario opened this issue Mar 12, 2025 · 0 comments · May be fixed by #97
Open

Remove hardcoded nextflow.config paths #95

azmigueldario opened this issue Mar 12, 2025 · 0 comments · May be fixed by #97
Assignees
@azmigueldario @mayee123
Labels
bug Something isn't working

Comments

@azmigueldario
Copy link

Description of the bug

Hardcoded variables in eagle are creating issues when running in other servers, so every server will have a dedicated profile in a config

Command used and terminal output



Relevant files


No response


System information


No response

      		
    

      
  





        



            

              
            

        

      


      
    








      

    



      

  
            

    

      
    

    


      

          @azmigueldario
azmigueldario




          added
  the 

  bug

  Something isn't working
 label


      Mar 12, 2025

    

  



    


  

  

    
  


  

    


      @azmigueldario
azmigueldario



        linked a pull request
        Mar 12, 2025
        that will
        close
        this issue





  

    
      95 remove hardcoded nextflowconfig paths
      #97
  



  

      
   Open

  





  
  

      
        
      
      

  
    
    
  


    8 tasks
  





  













  
  

    

      

  





  




  
  

              

  
    Sign up for free
    to join this conversation on GitHub.
    Already have an account?
    Sign in to comment


  



  






  
                  




    

  


      
  

    Assignees
  



        

      

        

  
      @azmigueldario
  
    azmigueldario
    

      

      

        

  
      @mayee123
  
    mayee123
    

      








      


  


  

    Labels
  



    

      

    bug

  Something isn't working








      

  

    

        

    Projects
  


        




    None yet




  



      


  

    
  

    Milestone
  


      No milestone





    
      
          


  

    

      
        

          
    

    Development
  




            
  
Successfully merging a pull request may close this issue.





    


  
          
      95 remove hardcoded nextflowconfig paths

    
      cidgoh/bacpaq
    





      
    

  




      

    

  
      

  

    

      2 participants
    

    

        
          @azmigueldario 
        
          @mayee123