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Mon May 20 16:01:42 PDT 2019

Outline of topics to present at RTG lunch event on 24 May 2019.

  • Slides
  • Monitoring
  • SSH keys
    • one time setup
    • public / private key pair
  • SSH login
  • module avail, module load commands

What follows is a standard, reasonable way to do things. There are plenty of variations and other valid approaches.

  • structure of a submission script
    • `#SBATCH is not a comment
  • R script content
  • Run an R script
    • I can close my terminal and it won't kill the job.
  • Parallelism: array jobs are an option
  • Manage your code with version control (Git)
  • Resources available