v0.1.3

Changelog:

• Removed NiBabel dep, using only built-in ants functions,
• Replaced manual crops with build-in ants.crop_indices,
• Forcing "LPI-" orientation (equivalent to "RAS+", it's just a naming convention) to prevent potential issues,
• Fixes and optimizations.

v0.1.2 - Added support for extra files to crop

Changelog:

• Support for extra files to crop based on pattern (e.g. a given manual segmentation to have matching labels on cropped MRIs),
• Fixes and optimizations.

v0.1.1

Changelog:

• Fixed incorrect output filenames when cropping multiple brain regions.

v0.1.0 - Initial Release

Initial release of ROILoc.

Currently supports the detection (T1 & T2, with or without brain extraction) of all regions included in the CerebrA atlas, multiple regions at once if needed.