NetLogoWeek11.nlogo

turtles-own
[ sick?
  immune?
  vaccine? ;boolean to see if turtle is vaccinated
  sick-count
  immune-count
  vaccine-count
  numOfSocialGathering
  dead?
]

globals
[
  %infected
  %immune
  %vaccinated ; vaccinated % monitor
]

to setup
  clear-all
  setup-turtles
  update-global-variables
  reset-ticks
end

to setup-turtles
  set-default-shape turtles "person"
  crt people
  [ setxy random-xcor random-ycor
    set sick-count 0
    set size 1.5
    get-healthy
    set vaccine? false
    set numOfSocialGathering 2
  ]
  ask n-of initialInfected turtles
    [get-sick]
end

to get-sick
  set sick? true
  set immune? false
  set color red
end

to get-healthy
  set sick? false
  set immune? false
  set sick-count 0
  set color green
end

to become-immune
  set sick? false
  set sick-count 0
  set immune? true
  set immune-count 0
  set color gray
end

to become-unimmune
  set sick? false
  set sick-count 0
  set immune? false
  set color blue
end

to get-vaccinated  ; set newly vacc turtles to white
  set vaccine? true
  set color white
end


to go
  get-older
  move
  infect
  recover
  lose-immunity
  update-global-variables
  vaccine ;random chance of getting vaccinated/ cuts infectiousness by %
  tick
  if (count turtles with [sick?] = 0)
  [stop]
end

to halt
  if (count turtles with [sick?] = 0)
  [stop]
end

to update-global-variables
  if count turtles > 0
  [
    set %infected (count turtles with [sick?]) / (count turtles) * 100
    set %immune (count turtles with [immune?]) / (count turtles) * 100
    set %vaccinated (count turtles with [vaccine?]) / (count turtles) * 100 ;update vaccinated turtles
  ]
end

to get-older
  ask turtles
  [ if sick?
    [set sick-count (sick-count + 1) ]

    if immune?
    [set immune-count (immune-count + 1) ]

    if vaccine?
    [set vaccine-count ( vaccine-count + 1)]
  ]
end

to vaccine
  ask turtles with [not sick? and not vaccine?]
    [if (random-float 100 < vaccination-rate) ;on average, vaccinates vaccination-rate% of the unsick+unvax turtles every tick
      [get-vaccinated]]
end

to move
  ask turtles
  [ rt random 100
    lt random 100
    fd 1 ]
end

to infect
  ask turtles with [sick?]
  [ask other turtles-here with [ not immune?]
    [ask other turtles-here with [vaccine?]
      [if (random-float 100) + immunity < infectiousness ; provides a set level of increased immunity. if infectiousness is 50 and immunity is 10, this means infectiousness is 40
        [get-sick]]]]
    ask turtles with [sick?]
  [ask other turtles-here with [ vaccine? and not immune?]
      [if (random-float 100) < infectiousness
        [get-sick]]]


end

to recover
  ask turtles with [sick?]
  [ if (random sick-count) > duration
    [ ifelse ((random-float 100) < chance-recover)
      [become-immune]
      [die] ] ]
end

to lose-immunity
  ask turtles with [immune?]
  [if immune-count > immune-time
    [become-unimmune]
  ]
end
@#$#@#$#@
GRAPHICS-WINDOW
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ticks
30.0

BUTTON
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12
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NIL
Setup\n
NIL
1
T
OBSERVER
NIL
NIL
NIL
NIL
1

BUTTON
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NIL
Go
T
1
T
OBSERVER
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1

SLIDER
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people
people
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HORIZONTAL

MONITOR
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%immune
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MONITOR
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NIL
%infected
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1
11

SLIDER
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infectiousness
infectiousness
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SLIDER
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duration
duration
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SLIDER
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chance-recover
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SLIDER
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immune-time
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SLIDER
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vaccination-rate
vaccination-rate
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SLIDER
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immunity
immunity
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SLIDER
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initialinfected
initialinfected
0
100
30.0
1
1
NIL
HORIZONTAL

SLIDER
20
485
192
518
elderly
elderly
0
100
50.0
1
1
NIL
HORIZONTAL

MONITOR
211
456
297
501
NIL
%vaccinated
17
1
11

@#$#@#$#@
## WHAT IS IT?

(a general understanding of what the model is trying to show or explain)

## HOW IT WORKS

(what rules the agents use to create the overall behavior of the model)

## HOW TO USE IT

(how to use the model, including a description of each of the items in the Interface tab)

## THINGS TO NOTICE

(suggested things for the user to notice while running the model)

## THINGS TO TRY

(suggested things for the user to try to do (move sliders, switches, etc.) with the model)

## EXTENDING THE MODEL

(suggested things to add or change in the Code tab to make the model more complicated, detailed, accurate, etc.)

## NETLOGO FEATURES

(interesting or unusual features of NetLogo that the model uses, particularly in the Code tab; or where workarounds were needed for missing features)

## RELATED MODELS

(models in the NetLogo Models Library and elsewhere which are of related interest)

## CREDITS AND REFERENCES

(a reference to the model's URL on the web if it has one, as well as any other necessary credits, citations, and links)
@#$#@#$#@
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@#$#@#$#@
NetLogo 6.2.0
@#$#@#$#@
@#$#@#$#@
@#$#@#$#@
<experiments>
  <experiment name="experiment" repetitions="1" runMetricsEveryStep="true">
    <setup>setup</setup>
    <go>go</go>
    <metric>count turtles</metric>
    <enumeratedValueSet variable="duration">
      <value value="14"/>
    </enumeratedValueSet>
    <enumeratedValueSet variable="people">
      <value value="50"/>
    </enumeratedValueSet>
    <enumeratedValueSet variable="infectiousness">
      <value value="50"/>
    </enumeratedValueSet>
    <enumeratedValueSet variable="immune-time">
      <value value="50"/>
    </enumeratedValueSet>
    <enumeratedValueSet variable="chance-recover">
      <value value="50"/>
    </enumeratedValueSet>
  </experiment>
</experiments>
@#$#@#$#@
@#$#@#$#@
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@#$#@#$#@
0
@#$#@#$#@