setup.py

# setuptools installation of GromacsWrapper
# Copyright (c) 2008-2011 Oliver Beckstein <orbeckst@gmail.com>
# Released under the GNU Public License 3 (or higher, your choice)
#
# See the files INSTALL and README for details or visit
# https://github.com/Becksteinlab/GromacsWrapper
from __future__ import with_statement
from setuptools import setup, find_packages

import versioneer

with open("README.rst") as readme:
    long_description = readme.read()


setup(name="GromacsWrapper",
      version=versioneer.get_version(),
      cmdclass=versioneer.get_cmdclass(),
      description="A Python wrapper around the Gromacs tools.",
      long_description=long_description,
      long_description_content_type="text/x-rst",
      author="Oliver Beckstein",
      author_email="orbeckst@gmail.com",
      license="GPLv3",
      url="https://github.com/Becksteinlab/GromacsWrapper",
      download_url="https://github.com/Becksteinlab/GromacsWrapper/downloads",
      keywords="science Gromacs analysis 'molecular dynamics'",
      classifiers=[
        'Development Status :: 4 - Beta',
        'Environment :: Console',
        'Intended Audience :: Science/Research',
        'License :: OSI Approved :: GNU General Public License (GPL)',
        'License :: OSI Approved :: BSD License',
        'Operating System :: POSIX',
        'Operating System :: MacOS :: MacOS X',
        'Operating System :: Microsoft :: Windows ',
        'Programming Language :: Python',
        'Programming Language :: Python :: 2',
        'Programming Language :: Python :: 2.7',
        'Programming Language :: Python :: 3',
        'Programming Language :: Python :: 3.6',
        'Programming Language :: Python :: 3.7',
        'Programming Language :: Python :: 3.8',
        'Programming Language :: Python :: 3.9',
        'Topic :: Scientific/Engineering :: Bio-Informatics',
        'Topic :: Scientific/Engineering :: Chemistry',
        'Topic :: Software Development :: Libraries :: Python Modules',
      ],
      packages=find_packages(
          exclude=['scripts', 'tests', 'tests.*', 'extras', 'doc/examples']),
      scripts=[
          'scripts/gw-join_parts.py',
          'scripts/gw-merge_topologies.py',
          'scripts/gw-forcefield.py',
          'scripts/gw-partial_tempering.py',
      ],
      package_data={'gromacs': ['templates/*.sge', 'templates/*.pbs',  # template files
                                'templates/*.ll', 'templates/*.sh',
                                'templates/*.mdp', 'templates/*.cfg'
                                ],
                    },
      install_requires=['numpy>=1.0',
                        'six',          # towards py 3 compatibility
                        'numkit',       # numerical helpers
                        'matplotlib',
                        ],
      tests_require=['pytest', 'numpy>=1.0', 'pandas>=0.17'],
      zip_safe=True,
      )