diff --git a/README.md b/README.md index 2058c5c..8c2bea0 100644 --- a/README.md +++ b/README.md @@ -108,10 +108,6 @@ TreeProfiler requires # Install ETE Toolkit v4 pip install --force-reinstall https://github.com/etetoolkit/ete/archive/ete4.zip - -# Install TreeProfiler dependencies -pip install biopython selenium scipy matplotlib pymc aesara - # Install custom pastml package for ete4 pip install "git+https://github.com/dengzq1234/pastml.git@pastml2ete4" @@ -194,7 +190,7 @@ Install dependencies # install BioPython, selenium, scipy via conda conda install -c conda-forge biopython selenium scipy matplotlib pymc aesara # or pip -pip install biopython selenium scipy matplotlib pymc aesara +pip install biopython selenium scipy matplotlib pymc aesara webdriver_manager pyvirtualdisplay ``` Install TreeProfiler diff --git a/setup.py b/setup.py index e9a2727..a703dd1 100644 --- a/setup.py +++ b/setup.py @@ -11,7 +11,7 @@ def get_files(directory): file_list.append(file_path) return file_list -VERSION = '1.2.3' +VERSION = '1.2.4' install_requires = ['ete4', 'selenium', 'biopython','scipy'] example_files = get_files('examples/') test_files = get_files('tests/') diff --git a/treeprofiler/treeprofiler.py b/treeprofiler/treeprofiler.py index a008519..8d2a854 100755 --- a/treeprofiler/treeprofiler.py +++ b/treeprofiler/treeprofiler.py @@ -10,7 +10,7 @@ __author__ = 'DENG Ziqi' __license__ = "GPL v3" __email__ = 'dengziqi1234@gmail.com' -__version__ = '1.1.0' +__version__ = '1.2.4' __date__ = '14-07-2023' __description__ = ('A program for profiling metadata on target ' 'tree and conduct summary analysis')