From 4d3955f6c11b7ce4bb289002a61091abc26d5a2e Mon Sep 17 00:00:00 2001 From: Ryan Avery Date: Sat, 9 Dec 2023 18:16:01 -0800 Subject: [PATCH] python package, cli, and old ml model spec validation --- .gitignore | 3 +- stac_model/.dockerignore | 38 + stac_model/.editorconfig | 24 + stac_model/.github/.stale.yml | 17 + .../.github/ISSUE_TEMPLATE/bug_report.md | 42 + stac_model/.github/ISSUE_TEMPLATE/config.yml | 3 + .../.github/ISSUE_TEMPLATE/feature_request.md | 23 + stac_model/.github/ISSUE_TEMPLATE/question.md | 28 + stac_model/.github/PULL_REQUEST_TEMPLATE.md | 31 + stac_model/.github/dependabot.yml | 35 + stac_model/.github/release-drafter.yml | 28 + stac_model/.github/workflows/build.yml | 44 + stac_model/.github/workflows/greetings.yml | 16 + .../.github/workflows/release-drafter.yml | 16 + stac_model/.gitignore | 1032 +++++++++++++ stac_model/.pre-commit-config.yaml | 13 + stac_model/AUTHORS.md | 9 + stac_model/CHANGELOG.md | 0 stac_model/CONTRIBUTING.md | 96 ++ stac_model/LICENSE | 207 +++ stac_model/Makefile | 94 ++ stac_model/README.md | 161 ++ stac_model/SECURITY.md | 29 + stac_model/docker/Dockerfile | 25 + stac_model/docker/README.md | 47 + stac_model/docs/.gitkeep | 0 stac_model/example.json | 53 + stac_model/model_metadata.py | 102 ++ stac_model/poetry.lock | 1355 +++++++++++++++++ stac_model/pyproject.toml | 201 +++ stac_model/requirements.txt | 12 + stac_model/stac_model/__init__.py | 8 + stac_model/stac_model/__main__.py | 69 + stac_model/stac_model/schema.py | 192 +++ stac_model/tests/test_schema.py | 68 + 35 files changed, 4120 insertions(+), 1 deletion(-) create mode 100644 stac_model/.dockerignore create mode 100644 stac_model/.editorconfig create mode 100644 stac_model/.github/.stale.yml create mode 100644 stac_model/.github/ISSUE_TEMPLATE/bug_report.md create mode 100644 stac_model/.github/ISSUE_TEMPLATE/config.yml create mode 100644 stac_model/.github/ISSUE_TEMPLATE/feature_request.md create mode 100644 stac_model/.github/ISSUE_TEMPLATE/question.md create mode 100644 stac_model/.github/PULL_REQUEST_TEMPLATE.md create mode 100644 stac_model/.github/dependabot.yml create mode 100644 stac_model/.github/release-drafter.yml create mode 100644 stac_model/.github/workflows/build.yml create mode 100644 stac_model/.github/workflows/greetings.yml create mode 100644 stac_model/.github/workflows/release-drafter.yml create mode 100644 stac_model/.gitignore create mode 100644 stac_model/.pre-commit-config.yaml create mode 100644 stac_model/AUTHORS.md create mode 100644 stac_model/CHANGELOG.md create mode 100644 stac_model/CONTRIBUTING.md create mode 100644 stac_model/LICENSE create mode 100644 stac_model/Makefile create mode 100644 stac_model/README.md create mode 100644 stac_model/SECURITY.md create mode 100644 stac_model/docker/Dockerfile create mode 100644 stac_model/docker/README.md create mode 100644 stac_model/docs/.gitkeep create mode 100644 stac_model/example.json create mode 100644 stac_model/model_metadata.py create mode 100644 stac_model/poetry.lock create mode 100644 stac_model/pyproject.toml create mode 100644 stac_model/requirements.txt create mode 100644 stac_model/stac_model/__init__.py create mode 100644 stac_model/stac_model/__main__.py create mode 100644 stac_model/stac_model/schema.py create mode 100644 stac_model/tests/test_schema.py diff --git a/.gitignore b/.gitignore index b68addb..654b340 100644 --- a/.gitignore +++ b/.gitignore @@ -1,2 +1,3 @@ /package-lock.json -/node_modules \ No newline at end of file +/node_modules +.vscode diff --git a/stac_model/.dockerignore b/stac_model/.dockerignore new file mode 100644 index 0000000..6be1e24 --- /dev/null +++ b/stac_model/.dockerignore @@ -0,0 +1,38 @@ +# Git +.git +.gitignore +.github + +# Docker +.dockerignore + +# IDE +.idea +.vscode + +# Byte-compiled / optimized / DLL files +__pycache__/ +**/__pycache__/ +*.pyc +*.pyo +*.pyd +.Python +*.py[cod] +*$py.class +.pytest_cache/ +..mypy_cache/ + +# poetry +.venv + +# C extensions +*.so + +# Virtual environment +.venv +venv + +.DS_Store +.AppleDouble +.LSOverride +._* diff --git a/stac_model/.editorconfig b/stac_model/.editorconfig new file mode 100644 index 0000000..7f578f1 --- /dev/null +++ b/stac_model/.editorconfig @@ -0,0 +1,24 @@ +# Check http://editorconfig.org for more information +# This is the main config file for this project: +root = true + +[*] +charset = utf-8 +end_of_line = lf +insert_final_newline = true +indent_style = space +indent_size = 2 +trim_trailing_whitespace = true + +[*.{py, pyi}] +indent_style = space +indent_size = 4 + +[Makefile] +indent_style = tab + +[*.md] +trim_trailing_whitespace = false + +[*.{diff,patch}] +trim_trailing_whitespace = false diff --git a/stac_model/.github/.stale.yml b/stac_model/.github/.stale.yml new file mode 100644 index 0000000..159f419 --- /dev/null +++ b/stac_model/.github/.stale.yml @@ -0,0 +1,17 @@ +# Number of days of inactivity before an issue becomes stale +daysUntilStale: 120 +# Number of days of inactivity before a stale issue is closed +daysUntilClose: 30 +# Issues with these labels will never be considered stale +exemptLabels: + - pinned + - security +# Label to use when marking an issue as stale +staleLabel: stale +# Comment to post when marking an issue as stale. Set to `false` to disable +markComment: > + This issue has been automatically marked as stale because it has not had + recent activity. It will be closed if no further activity occurs. Thank you + for your contributions. +# Comment to post when closing a stale issue. Set to `false` to disable +closeComment: false diff --git a/stac_model/.github/ISSUE_TEMPLATE/bug_report.md b/stac_model/.github/ISSUE_TEMPLATE/bug_report.md new file mode 100644 index 0000000..996ff26 --- /dev/null +++ b/stac_model/.github/ISSUE_TEMPLATE/bug_report.md @@ -0,0 +1,42 @@ +--- +name: ":bug: Bug report" +about: If something isn't working 🔧 +title: '' +labels: bug, needs-triage +assignees: +--- + +## :bug: Bug Report + + + +## :microscope: How To Reproduce + +Steps to reproduce the behaviour: + +1. ... + +### Code sample + + + +### Environment + +* OS: [e.g. Linux / Windows / macOS] +* Python version, get it with: + +```bash +python --version +``` + +### Screenshots + + + +## :chart_with_upwards_trend: Expected behavior + + + +## :paperclip: Additional context + + diff --git a/stac_model/.github/ISSUE_TEMPLATE/config.yml b/stac_model/.github/ISSUE_TEMPLATE/config.yml new file mode 100644 index 0000000..8f2da54 --- /dev/null +++ b/stac_model/.github/ISSUE_TEMPLATE/config.yml @@ -0,0 +1,3 @@ +# Configuration: https://help.github.com/en/github/building-a-strong-community/configuring-issue-templates-for-your-repository + +blank_issues_enabled: false diff --git a/stac_model/.github/ISSUE_TEMPLATE/feature_request.md b/stac_model/.github/ISSUE_TEMPLATE/feature_request.md new file mode 100644 index 0000000..41bf0cd --- /dev/null +++ b/stac_model/.github/ISSUE_TEMPLATE/feature_request.md @@ -0,0 +1,23 @@ +--- +name: ":rocket: Feature request" +about: Suggest an idea for this project 🏖 +title: '' +labels: enhancement, needs-triage +assignees: +--- + +## :rocket: Feature Request + + + +## :sound: Motivation + + + +## :satellite: Alternatives + + + +## :paperclip: Additional context + + diff --git a/stac_model/.github/ISSUE_TEMPLATE/question.md b/stac_model/.github/ISSUE_TEMPLATE/question.md new file mode 100644 index 0000000..6ac7668 --- /dev/null +++ b/stac_model/.github/ISSUE_TEMPLATE/question.md @@ -0,0 +1,28 @@ +--- +name: "red_question_mark Question" +about: Ask a question about this project 🎓 +title: '' +labels: question, needs-triage +assignees: +--- + +## Checklist + + + +- [ ] I've searched the project's [`issues`][1], looking for the following terms: + - [...] + +## :question: Question + + + +How can I [...]? + +Is it possible to [...]? + +## :paperclip: Additional context + + + +[1]: https://github.com/rbavery/stac-model/issues diff --git a/stac_model/.github/PULL_REQUEST_TEMPLATE.md b/stac_model/.github/PULL_REQUEST_TEMPLATE.md new file mode 100644 index 0000000..5e3bd6d --- /dev/null +++ b/stac_model/.github/PULL_REQUEST_TEMPLATE.md @@ -0,0 +1,31 @@ +## Description + + + +## Related Issue + + + +## Type of Change + + + +- [ ] :books: Examples, docs, tutorials or dependencies update; +- [ ] :wrench: Bug fix (non-breaking change which fixes an issue); +- [ ] :clinking_glasses: Improvement (non-breaking change which improves an existing feature); +- [ ] :rocket: New feature (non-breaking change which adds functionality); +- [ ] :boom: Breaking change (fix or feature that would cause existing functionality to change); +- [ ] :closed_lock_with_key: Security fix. + +## Checklist + + + +- [ ] I've read the [`CODE_OF_CONDUCT.md`][1] document; +- [ ] I've read the [`CONTRIBUTING.md`][2] guide; +- [ ] I've updated the code style using `make codestyle`; +- [ ] I've written tests for all new methods and classes that I created; +- [ ] I've written the docstring in `Google` format for all the methods and classes that I used. + +[1]: https://github.com/rbavery/stac-model/blob/master/CODE_OF_CONDUCT.md +[2]: https://github.com/rbavery/stac-model/blob/master/CONTRIBUTING.md diff --git a/stac_model/.github/dependabot.yml b/stac_model/.github/dependabot.yml new file mode 100644 index 0000000..8f872f1 --- /dev/null +++ b/stac_model/.github/dependabot.yml @@ -0,0 +1,35 @@ +# Configuration: https://dependabot.com/docs/config-file/ +# Docs: https://docs.github.com/en/github/administering-a-repository/keeping-your-dependencies-updated-automatically + +version: 2 + +updates: + - package-ecosystem: "pip" + directory: "/" + schedule: + interval: "monthly" + allow: + - dependency-type: "all" + commit-message: + prefix: ":arrow_up:" + open-pull-requests-limit: 5 + + - package-ecosystem: "github-actions" + directory: "/" + schedule: + interval: "monthly" + allow: + - dependency-type: "all" + commit-message: + prefix: ":arrow_up:" + open-pull-requests-limit: 5 + + - package-ecosystem: "docker" + directory: "/docker" + schedule: + interval: "monthly" + allow: + - dependency-type: "all" + commit-message: + prefix: ":arrow_up:" + open-pull-requests-limit: 5 diff --git a/stac_model/.github/release-drafter.yml b/stac_model/.github/release-drafter.yml new file mode 100644 index 0000000..8ad8b33 --- /dev/null +++ b/stac_model/.github/release-drafter.yml @@ -0,0 +1,28 @@ +# Release drafter configuration https://github.com/release-drafter/release-drafter#configuration +# Emojis were chosen to match the https://gitmoji.dev/ + +name-template: "v$NEXT_PATCH_VERSION" +tag-template: "v$NEXT_PATCH_VERSION" + +categories: + - title: ":rocket: Features" + labels: [enhancement, feature] + - title: ":wrench: Fixes & Refactoring" + labels: [bug, refactoring, bugfix, fix] + - title: ":package: Build System & CI/CD" + labels: [build, ci, testing] + - title: ":boom: Breaking Changes" + labels: [breaking] + - title: ":memo: Documentation" + labels: [documentation] + - title: ":arrow_up: Dependencies updates" + labels: [dependencies] + +template: | + ## What's Changed + + $CHANGES + + ## :busts_in_silhouette: List of contributors + + $CONTRIBUTORS diff --git a/stac_model/.github/workflows/build.yml b/stac_model/.github/workflows/build.yml new file mode 100644 index 0000000..1775cfb --- /dev/null +++ b/stac_model/.github/workflows/build.yml @@ -0,0 +1,44 @@ + +# UPDATEME to suit your project's workflow +name: build + +on: [push, pull_request] + +jobs: + build: + runs-on: ubuntu-latest + strategy: + matrix: + python-version: ["3.10", "3.11"] + + steps: + - uses: actions/checkout@v2 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v2.2.2 + with: + python-version: ${{ matrix.python-version }} + + - name: Install poetry + run: make poetry-download + + - name: Set up cache + uses: actions/cache@v2.1.6 + with: + path: .venv + key: venv-${{ matrix.python-version }}-${{ hashFiles('pyproject.toml') }}-${{ hashFiles('poetry.lock') }} + - name: Install dependencies + run: | + poetry config virtualenvs.in-project true + poetry install + + - name: Run style checks + run: | + make check-codestyle + + - name: Run tests + run: | + make test + + - name: Run safety checks + run: | + make check-safety diff --git a/stac_model/.github/workflows/greetings.yml b/stac_model/.github/workflows/greetings.yml new file mode 100644 index 0000000..a1f6e89 --- /dev/null +++ b/stac_model/.github/workflows/greetings.yml @@ -0,0 +1,16 @@ +name: Greetings + +on: [pull_request, issues] + +jobs: + greeting: + runs-on: ubuntu-latest + steps: + - uses: actions/first-interaction@v1 + with: + repo-token: ${{ secrets.GITHUB_TOKEN }} + pr-message: 'Hello @${{ github.actor }}, thank you for submitting a PR! We will respond as soon as possible.' + issue-message: | + Hello @${{ github.actor }}, thank you for your interest in our work! + + If this is a bug report, please provide screenshots and **minimum viable code to reproduce your issue**, otherwise we can not help you. diff --git a/stac_model/.github/workflows/release-drafter.yml b/stac_model/.github/workflows/release-drafter.yml new file mode 100644 index 0000000..0c06b2b --- /dev/null +++ b/stac_model/.github/workflows/release-drafter.yml @@ -0,0 +1,16 @@ +name: Release Drafter + +on: + push: + # branches to consider in the event; optional, defaults to all + branches: + - main + +jobs: + update_release_draft: + runs-on: ubuntu-latest + steps: + # Drafts your next Release notes as Pull Requests are merged into "master" + - uses: release-drafter/release-drafter@v5.15.0 + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/stac_model/.gitignore b/stac_model/.gitignore new file mode 100644 index 0000000..e4eed7d --- /dev/null +++ b/stac_model/.gitignore @@ -0,0 +1,1032 @@ +### ArchLinuxPackages ### +*.tar +*.tar.* +*.jar +*.exe +*.msi +*.zip +*.tgz +*.log +*.log.* +*.sig + +pkg/ +src/ + +### C ### +# Prerequisites +*.d + +# Object files +*.o +*.ko +*.obj +*.elf + +# Linker output +*.ilk +*.map +*.exp + +# Precompiled Headers +*.gch +*.pch + +# Libraries +*.lib +*.a +*.la +*.lo + +# Shared objects (inc. Windows DLLs) +*.dll +*.so +*.so.* +*.dylib + +# Executables +*.out +*.app +*.i*86 +*.x86_64 +*.hex + +# Debug files +*.dSYM/ +*.su +*.idb +*.pdb + +# Kernel Module Compile Results +*.mod* +*.cmd +.tmp_versions/ +modules.order +Module.symvers +Mkfile.old +dkms.conf + +### certificates ### +*.pem +*.key +*.crt +*.cer +*.der +*.priv + +### Database ### +*.accdb +*.db +*.dbf +*.mdb +*.sqlite3 +*.db-shm +*.db-wal + +### Diff ### +*.patch +*.diff + +### Django ### +*.pot +*.pyc +__pycache__/ +local_settings.py +db.sqlite3 +db.sqlite3-journal +media + +# If your build process includes running collectstatic, then you probably don't need or want to include staticfiles/ +# in your Git repository. Update and uncomment the following line accordingly. +# /staticfiles/ + +### Django.Python Stack ### +# Byte-compiled / optimized / DLL files +*.py[cod] +*$py.class + +# C extensions + +# Distribution / packaging +.Python +build/ +develop-eggs/ +dist/ +downloads/ +eggs/ +.eggs/ +lib/ +lib64/ +parts/ +sdist/ +var/ +wheels/ +share/python-wheels/ +*.egg-info/ +.installed.cfg +*.egg +MANIFEST + +# PyInstaller +# Usually these files are written by a python script from a template +# before PyInstaller builds the exe, so as to inject date/other infos into it. +*.manifest +*.spec + +# Installer logs +pip-log.txt +pip-delete-this-directory.txt + +# Unit test / coverage reports +htmlcov/ +.tox/ +.nox/ +.coverage +.coverage.* +.cache +nosetests.xml +coverage.xml +*.cover +*.py,cover +.hypothesis/ +.pytest_cache/ +cover/ + +# Translations +*.mo + +# Django stuff: + +# Flask stuff: +instance/ +.webassets-cache + +# Scrapy stuff: +.scrapy + +# Sphinx documentation +docs/_build/ + +# PyBuilder +.pybuilder/ +target/ + +# Jupyter Notebook +.ipynb_checkpoints + +# IPython +profile_default/ +ipython_config.py + +# pyenv +# For a library or package, you might want to ignore these files since the code is +# intended to run in multiple environments; otherwise, check them in: +# .python-version + +# pipenv +# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control. +# However, in case of collaboration, if having platform-specific dependencies or dependencies +# having no cross-platform support, pipenv may install dependencies that don't work, or not +# install all needed dependencies. +#Pipfile.lock + +# poetry +# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control. +# This is especially recommended for binary packages to ensure reproducibility, and is more +# commonly ignored for libraries. +# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control +#poetry.lock + +# pdm +# Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control. +#pdm.lock +# pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it +# in version control. +# https://pdm.fming.dev/#use-with-ide +.pdm.toml + +# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm +__pypackages__/ + +# Celery stuff +celerybeat-schedule +celerybeat.pid + +# SageMath parsed files +*.sage.py + +# Environments +.env +.venv +env/ +venv/ +ENV/ +env.bak/ +venv.bak/ + +# Spyder project settings +.spyderproject +.spyproject + +# Rope project settings +.ropeproject + +# mkdocs documentation +/site + +# mypy +.mypy_cache/ +.dmypy.json +dmypy.json + +# Pyre type checker +.pyre/ + +# pytype static type analyzer +.pytype/ + +# Cython debug symbols +cython_debug/ + +# PyCharm +# JetBrains specific template is maintained in a separate JetBrains.gitignore that can +# be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore +# and can be added to the global gitignore or merged into this file. For a more nuclear +# option (not recommended) you can uncomment the following to ignore the entire idea folder. +#.idea/ + +### Git ### +# Created by git for backups. To disable backups in Git: +# $ git config --global mergetool.keepBackup false +*.orig + +# Created by git when using merge tools for conflicts +*.BACKUP.* +*.BASE.* +*.LOCAL.* +*.REMOTE.* +*_BACKUP_*.txt +*_BASE_*.txt +*_LOCAL_*.txt +*_REMOTE_*.txt + +### Linux ### +*~ + +# temporary files which can be created if a process still has a handle open of a deleted file +.fuse_hidden* + +# KDE directory preferences +.directory + +# Linux trash folder which might appear on any partition or disk +.Trash-* + +# .nfs files are created when an open file is removed but is still being accessed +.nfs* + +### MicrosoftOffice ### +*.tmp + +# Word temporary +~$*.doc* + +# Word Auto Backup File +Backup of *.doc* + +# Excel temporary +~$*.xls* + +# Excel Backup File +*.xlk + +# PowerPoint temporary +~$*.ppt* + +# Visio autosave temporary files +*.~vsd* + +### OSX ### +# General +.DS_Store +.AppleDouble +.LSOverride + +# Icon must end with two \r +Icon + +# Thumbnails +._* + +# Files that might appear in the root of a volume +.DocumentRevisions-V100 +.fseventsd +.Spotlight-V100 +.TemporaryItems +.Trashes +.VolumeIcon.icns +.com.apple.timemachine.donotpresent + +# Directories potentially created on remote AFP share +.AppleDB +.AppleDesktop +Network Trash Folder +Temporary Items +.apdisk + +### PyCharm ### +# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio, WebStorm and Rider +# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839 + +# User-specific stuff +.idea/**/workspace.xml +.idea/**/tasks.xml +.idea/**/usage.statistics.xml +.idea/**/dictionaries +.idea/**/shelf + +# AWS User-specific +.idea/**/aws.xml + +# Generated files +.idea/**/contentModel.xml + +# Sensitive or high-churn files +.idea/**/dataSources/ +.idea/**/dataSources.ids +.idea/**/dataSources.local.xml +.idea/**/sqlDataSources.xml +.idea/**/dynamic.xml +.idea/**/uiDesigner.xml +.idea/**/dbnavigator.xml + +# Gradle +.idea/**/gradle.xml +.idea/**/libraries + +# Gradle and Maven with auto-import +# When using Gradle or Maven with auto-import, you should exclude module files, +# since they will be recreated, and may cause churn. Uncomment if using +# auto-import. +# .idea/artifacts +# .idea/compiler.xml +# .idea/jarRepositories.xml +# .idea/modules.xml +# .idea/*.iml +# .idea/modules +# *.iml +# *.ipr + +# CMake +cmake-build-*/ + +# Mongo Explorer plugin +.idea/**/mongoSettings.xml + +# File-based project format +*.iws + +# IntelliJ +out/ + +# mpeltonen/sbt-idea plugin +.idea_modules/ + +# JIRA plugin +atlassian-ide-plugin.xml + +# Cursive Clojure plugin +.idea/replstate.xml + +# SonarLint plugin +.idea/sonarlint/ + +# Crashlytics plugin (for Android Studio and IntelliJ) +com_crashlytics_export_strings.xml +crashlytics.properties +crashlytics-build.properties +fabric.properties + +# Editor-based Rest Client +.idea/httpRequests + +# Android studio 3.1+ serialized cache file +.idea/caches/build_file_checksums.ser + +### PyCharm Patch ### +# Comment Reason: https://github.com/joeblau/gitignore.io/issues/186#issuecomment-215987721 + +# *.iml +# modules.xml +# .idea/misc.xml +# *.ipr + +# Sonarlint plugin +# https://plugins.jetbrains.com/plugin/7973-sonarlint +.idea/**/sonarlint/ + +# SonarQube Plugin +# https://plugins.jetbrains.com/plugin/7238-sonarqube-community-plugin +.idea/**/sonarIssues.xml + +# Markdown Navigator plugin +# https://plugins.jetbrains.com/plugin/7896-markdown-navigator-enhanced +.idea/**/markdown-navigator.xml +.idea/**/markdown-navigator-enh.xml +.idea/**/markdown-navigator/ + +# Cache file creation bug +# See https://youtrack.jetbrains.com/issue/JBR-2257 +.idea/$CACHE_FILE$ + +# CodeStream plugin +# https://plugins.jetbrains.com/plugin/12206-codestream +.idea/codestream.xml + +# Azure Toolkit for IntelliJ plugin +# https://plugins.jetbrains.com/plugin/8053-azure-toolkit-for-intellij +.idea/**/azureSettings.xml + +### Python ### +# Byte-compiled / optimized / DLL files + +# C extensions + +# Distribution / packaging + +# PyInstaller +# Usually these files are written by a python script from a template +# before PyInstaller builds the exe, so as to inject date/other infos into it. + +# Installer logs + +# Unit test / coverage reports + +# Translations + +# Django stuff: + +# Flask stuff: + +# Scrapy stuff: + +# Sphinx documentation + +# PyBuilder + +# Jupyter Notebook + +# IPython + +# pyenv +# For a library or package, you might want to ignore these files since the code is +# intended to run in multiple environments; otherwise, check them in: +# .python-version + +# pipenv +# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control. +# However, in case of collaboration, if having platform-specific dependencies or dependencies +# having no cross-platform support, pipenv may install dependencies that don't work, or not +# install all needed dependencies. + +# poetry +# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control. +# This is especially recommended for binary packages to ensure reproducibility, and is more +# commonly ignored for libraries. +# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control + +# pdm +# Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control. +# pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it +# in version control. +# https://pdm.fming.dev/#use-with-ide + +# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm + +# Celery stuff + +# SageMath parsed files + +# Environments + +# Spyder project settings + +# Rope project settings + +# mkdocs documentation + +# mypy + +# Pyre type checker + +# pytype static type analyzer + +# Cython debug symbols + +# PyCharm +# JetBrains specific template is maintained in a separate JetBrains.gitignore that can +# be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore +# and can be added to the global gitignore or merged into this file. For a more nuclear +# option (not recommended) you can uncomment the following to ignore the entire idea folder. + +### Python Patch ### +# Poetry local configuration file - https://python-poetry.org/docs/configuration/#local-configuration +poetry.toml + +# ruff +.ruff_cache/ + +# LSP config files +pyrightconfig.json + +### Spreadsheet ### +*.xlr +*.xls +*.xlsx + +### SSH ### +**/.ssh/id_* +**/.ssh/*_id_* +**/.ssh/known_hosts + +### Vim ### +# Swap +[._]*.s[a-v][a-z] +!*.svg # comment out if you don't need vector files +[._]*.sw[a-p] +[._]s[a-rt-v][a-z] +[._]ss[a-gi-z] +[._]sw[a-p] + +# Session +Session.vim +Sessionx.vim + +# Temporary +.netrwhist +# Auto-generated tag files +tags +# Persistent undo +[._]*.un~ + +### VisualStudioCode ### +.vscode/* +!.vscode/settings.json +!.vscode/tasks.json +!.vscode/launch.json +!.vscode/extensions.json +!.vscode/*.code-snippets + +# Local History for Visual Studio Code +.history/ + +# Built Visual Studio Code Extensions +*.vsix + +### 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Python) + +# Zunit tests' output +/tests/_output/* +!/tests/_output/.gitkeep + +### VisualStudio ### +## Ignore Visual Studio temporary files, build results, and +## files generated by popular Visual Studio add-ons. +## +## Get latest from https://github.com/github/gitignore/blob/main/VisualStudio.gitignore + +# User-specific files +*.rsuser +*.suo +*.user +*.userosscache +*.sln.docstates + +# User-specific files (MonoDevelop/Xamarin Studio) +*.userprefs + +# Mono auto generated files +mono_crash.* + +# Build results +[Dd]ebug/ +[Dd]ebugPublic/ +[Rr]elease/ +[Rr]eleases/ +x64/ +x86/ +[Ww][Ii][Nn]32/ +[Aa][Rr][Mm]/ +[Aa][Rr][Mm]64/ +bld/ +[Bb]in/ +[Oo]bj/ +[Ll]og/ +[Ll]ogs/ + +# Visual Studio 2015/2017 cache/options directory +.vs/ +# Uncomment if you have tasks that create the project's static files in wwwroot +#wwwroot/ + +# Visual Studio 2017 auto generated files +Generated\ Files/ + +# MSTest test Results +[Tt]est[Rr]esult*/ +[Bb]uild[Ll]og.* + +# NUnit +*.VisualState.xml +TestResult.xml +nunit-*.xml + +# Build Results of an ATL Project +[Dd]ebugPS/ +[Rr]eleasePS/ +dlldata.c + +# Benchmark Results +BenchmarkDotNet.Artifacts/ + +# .NET Core +project.lock.json +project.fragment.lock.json +artifacts/ + +# ASP.NET Scaffolding +ScaffoldingReadMe.txt + +# StyleCop +StyleCopReport.xml + +# Files built by Visual Studio +*_i.c +*_p.c +*_h.h +*.meta +*.iobj +*.ipdb +*.pgc +*.pgd +*.rsp +*.sbr +*.tlb +*.tli +*.tlh +*.tmp_proj +*_wpftmp.csproj +*.tlog +*.vspscc +*.vssscc +.builds +*.pidb +*.svclog +*.scc + +# Chutzpah Test files +_Chutzpah* + +# Visual C++ cache files +ipch/ +*.aps +*.ncb +*.opendb +*.opensdf +*.sdf +*.cachefile +*.VC.db +*.VC.VC.opendb + +# Visual Studio profiler +*.psess +*.vsp +*.vspx +*.sap + +# Visual Studio Trace Files +*.e2e + +# TFS 2012 Local Workspace +$tf/ + +# Guidance Automation Toolkit +*.gpState + +# ReSharper is a .NET coding add-in +_ReSharper*/ +*.[Rr]e[Ss]harper +*.DotSettings.user + +# TeamCity is a build add-in +_TeamCity* + +# 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+# Microsoft Azure Web App publish settings. Comment the next line if you want to +# checkin your Azure Web App publish settings, but sensitive information contained +# in these scripts will be unencrypted +PublishScripts/ + +# NuGet Packages +*.nupkg +# NuGet Symbol Packages +*.snupkg +# The packages folder can be ignored because of Package Restore +**/[Pp]ackages/* +# except build/, which is used as an MSBuild target. +!**/[Pp]ackages/build/ +# Uncomment if necessary however generally it will be regenerated when needed +#!**/[Pp]ackages/repositories.config +# NuGet v3's project.json files produces more ignorable files +*.nuget.props +*.nuget.targets + +# Microsoft Azure Build Output +csx/ +*.build.csdef + +# Microsoft Azure Emulator +ecf/ +rcf/ + +# Windows Store app package directories and files +AppPackages/ +BundleArtifacts/ +Package.StoreAssociation.xml +_pkginfo.txt +*.appx +*.appxbundle +*.appxupload + +# Visual Studio cache files +# files ending in .cache can be ignored +*.[Cc]ache +# but keep track of directories ending in .cache +!?*.[Cc]ache/ + +# Others +ClientBin/ +~$* +*.dbmdl +*.dbproj.schemaview +*.jfm +*.pfx +*.publishsettings +orleans.codegen.cs + +# Including strong name files can present a security risk +# (https://github.com/github/gitignore/pull/2483#issue-259490424) +#*.snk + +# Since there are multiple workflows, uncomment next line to ignore bower_components +# (https://github.com/github/gitignore/pull/1529#issuecomment-104372622) +#bower_components/ + +# RIA/Silverlight projects +Generated_Code/ + +# Backup & report files from converting an old project file +# to a newer Visual Studio version. Backup files are not needed, +# because we have git ;-) +_UpgradeReport_Files/ +Backup*/ +UpgradeLog*.XML +UpgradeLog*.htm +ServiceFabricBackup/ +*.rptproj.bak + +# SQL Server files +*.mdf +*.ldf +*.ndf + +# Business Intelligence projects +*.rdl.data +*.bim.layout +*.bim_*.settings +*.rptproj.rsuser +*- [Bb]ackup.rdl +*- [Bb]ackup ([0-9]).rdl +*- [Bb]ackup ([0-9][0-9]).rdl + +# Microsoft Fakes +FakesAssemblies/ + +# GhostDoc plugin setting file +*.GhostDoc.xml + +# Node.js Tools for Visual Studio +.ntvs_analysis.dat +node_modules/ + +# Visual Studio 6 build log +*.plg + +# Visual Studio 6 workspace options file +*.opt + +# Visual Studio 6 auto-generated workspace file (contains which files were open etc.) +*.vbw + +# Visual Studio 6 auto-generated project file (contains which files were open etc.) +*.vbp + +# Visual Studio 6 workspace and project file (working project files containing files to include in project) +*.dsw +*.dsp + +# Visual Studio 6 technical files + +# Visual Studio LightSwitch build output +**/*.HTMLClient/GeneratedArtifacts +**/*.DesktopClient/GeneratedArtifacts +**/*.DesktopClient/ModelManifest.xml +**/*.Server/GeneratedArtifacts +**/*.Server/ModelManifest.xml +_Pvt_Extensions + +# Paket dependency manager +.paket/paket.exe +paket-files/ + +# FAKE - F# Make +.fake/ + +# CodeRush personal settings +.cr/personal + +# Python Tools for Visual Studio (PTVS) + +# Cake - Uncomment if you are using it +# tools/** +# !tools/packages.config + +# Tabs Studio +*.tss + +# Telerik's JustMock configuration file +*.jmconfig + +# BizTalk build output +*.btp.cs +*.btm.cs +*.odx.cs +*.xsd.cs + +# OpenCover UI analysis results +OpenCover/ + +# Azure Stream Analytics local run output +ASALocalRun/ + +# MSBuild Binary and Structured Log +*.binlog + +# NVidia Nsight GPU debugger configuration file +*.nvuser + +# MFractors (Xamarin productivity tool) working folder +.mfractor/ + +# Local History for Visual Studio +.localhistory/ + +# Visual Studio History (VSHistory) files +.vshistory/ + +# BeatPulse healthcheck temp database +healthchecksdb + +# Backup folder for Package Reference Convert tool in Visual Studio 2017 +MigrationBackup/ + +# Ionide (cross platform F# VS Code tools) working folder +.ionide/ + +# Fody - auto-generated XML schema +FodyWeavers.xsd + +# VS Code files for those working on multiple tools +*.code-workspace + +# Local History for Visual Studio Code + +# Windows Installer files from build outputs + +# JetBrains Rider +*.sln.iml + +### VisualStudio Patch ### +# Additional files built by Visual Studio + +# End of https://www.toptal.com/developers/gitignore/api/linux,archlinuxpackages,osx,windows,python,c,django,database,pycharm,visualstudio,visualstudiocode,vim,zsh,git,diff,microsoftoffice,spreadsheet,ssh,certificates diff --git a/stac_model/.pre-commit-config.yaml b/stac_model/.pre-commit-config.yaml new file mode 100644 index 0000000..a905288 --- /dev/null +++ b/stac_model/.pre-commit-config.yaml @@ -0,0 +1,13 @@ +default_language_version: + python: python3.10 + +default_stages: [commit, push] + +repos: + - repo: https://github.com/pre-commit/pre-commit-hooks + rev: v2.5.0 + hooks: + - id: check-yaml + - id: end-of-file-fixer + exclude: LICENCE +# UPDATEME with additional hooks diff --git a/stac_model/AUTHORS.md b/stac_model/AUTHORS.md new file mode 100644 index 0000000..7a4332f --- /dev/null +++ b/stac_model/AUTHORS.md @@ -0,0 +1,9 @@ +# Credits + +## Main Developer + +- Ryan Avery + +## Contributors + +We don't have contributors... yet. Why not be the first? diff --git a/stac_model/CHANGELOG.md b/stac_model/CHANGELOG.md new file mode 100644 index 0000000..e69de29 diff --git a/stac_model/CONTRIBUTING.md b/stac_model/CONTRIBUTING.md new file mode 100644 index 0000000..89eda26 --- /dev/null +++ b/stac_model/CONTRIBUTING.md @@ -0,0 +1,96 @@ +# How to contribute + +### Project setup + +1. If you don't have `Poetry` installed run: + +```bash +make poetry-install +``` + +> This installs Poetry as a [standalone application][fs1]. If you prefer, you can simply install it inside your virtual environment. + +2. Initialize project dependencies with poetry and install `pre-commit` hooks: + +```bash +make install +make pre-commit-install +``` + +You're then ready to run and test your contributions. + +To activate your `virtualenv` run `poetry shell`. + +Want to know more about Poetry? Check [its documentation][fs2]. + +Poetry's [commands][fs3] let you easily make descriptive python environments and run commands in those environments, like: + +- `poetry add numpy@latest` +- `poetry run pytest` +- `poetry publish --build` + +etc. + +3. Run the codestyle and other checks: + +```bash +make codestyle +``` + +Many checks are configured for this project. Command `make check-codestyle` will run ruff for linting and autoformatting. `make lint` will just run linting. `make check-safety` will look at the security of your code. + +Command `make lint-all` applies all checks. + + +4. Run `pytest` with + +```bash +make test +``` + + +5. Upload your changes to your fork, then make a PR from there to the main repo: + +```bash +git checkout -b your-branch +git add . +git commit -m ":tada: Initial commit" +git remote add origin https://github.com/your-fork/stac-model.git +git push -u origin your-branch +``` + +### Building and releasing stac-model + +Building a new version of `stac-model` contains steps: + +- Bump the version with `poetry version `. You can pass the new version explicitly, or a rule such as `major`, `minor`, or `patch`. For more details, refer to the [Semantic Versions][fs4] standard; +- Make a commit to `GitHub`; +- Create a `GitHub release`; +- And... publish :slight_smile: `poetry publish --build` + +### Before submitting + +Before submitting your code please do the following steps: + +1. Add any changes you want +1. Add tests for the new changes +1. Edit documentation if you have changed something significant +1. Run `make codestyle` to format your changes. +1. Run `make lint-all` to ensure that types, security and docstrings are okay. + +## Other help + +You can contribute by spreading a word about this library. +It would also be a huge contribution to write +a short article on how you are using this project. +You can also share how the ML Model extension does or does +not serve your needs with us in the Github Discussions or raise +Issues for bugs. + +[fs1]: https://github.com/python-poetry/install.python-poetry.org +[fs2]: https://python-poetry.org/docs/ +[fs3]: https://python-poetry.org/docs/cli/#commands +[fs4]: https://semver.org/ + +[li2]: http://www.pydocstyle.org/en/stable/ +[li3]: https://github.com/jsh9/pydoclint diff --git a/stac_model/LICENSE b/stac_model/LICENSE new file mode 100644 index 0000000..938525f --- /dev/null +++ b/stac_model/LICENSE @@ -0,0 +1,207 @@ +Apache License +Version 2.0, January 2004 +http://www.apache.org/licenses/ + +TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION + +1. 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The text should be + enclosed in the appropriate comment syntax for the file format. We also + recommend that a file or class name and description of purpose be included + on the same "printed page" as the copyright notice for easier + identification within third-party archives. + + Copyright 2023 Ryan Avery + + Licensed under the Apache License, Version 2.0 (the "License"); + you may not use this file except in compliance with the License. + You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + + Unless required by applicable law or agreed to in writing, software + distributed under the License is distributed on an "AS IS" BASIS, + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express + or implied. See the License for the specific language governing + permissions and limitations under the License. diff --git a/stac_model/Makefile b/stac_model/Makefile new file mode 100644 index 0000000..90b3c16 --- /dev/null +++ b/stac_model/Makefile @@ -0,0 +1,94 @@ +#* Variables +SHELL := /usr/bin/env bash +PYTHON := python +PYTHONPATH := `pwd` + +#* Poetry +.PHONY: poetry-install +poetry-install: + curl -sSL https://install.python-poetry.org | $(PYTHON) - + +.PHONY: poetry-remove +poetry-remove: + curl -sSL https://install.python-poetry.org | $(PYTHON) - --uninstall + +.PHONY: poetry-plugins +poetry-plugins: + poetry self add poetry-plugin-up + + +#* Installation +.PHONY: install +install: + poetry lock -n && poetry export --without-hashes > requirements.txt + poetry install -n + -poetry run mypy --install-types --non-interactive ./ + +.PHONY: pre-commit-install +pre-commit-install: + poetry run pre-commit install + + +#* Formatters +.PHONY: codestyle +codestyle: + poetry run ruff format --config=pyproject.toml stac_model tests + +.PHONY: format +format: codestyle + +#* Linting +.PHONY: test +test: + PYTHONPATH=$(PYTHONPATH) poetry run pytest -c pyproject.toml --cov-report=html --cov=stac_model tests/ + +.PHONY: mypy +mypy: + poetry run mypy --config-file pyproject.toml ./ + +.PHONY: check-safety +check-safety: + poetry check + poetry run safety check --full-report + poetry run bandit -ll --recursive stac_model tests + +.PHONY: lint +lint: + poetry run ruff --config=pyproject.toml ./ + poetry run pydocstyle --count --config=pyproject.toml ./ + poetry run pydoclint --config=pyproject.toml ./ + +.PHONY: lint-all +lint: test lint mypy check-safety + +.PHONY: update-dev-deps +update-dev-deps: + poetry up --only=dev-dependencies --latest + +#* Cleaning +.PHONY: pycache-remove +pycache-remove: + find . | grep -E "(__pycache__|\.pyc|\.pyo$$)" | xargs rm -rf + +.PHONY: dsstore-remove +dsstore-remove: + find . | grep -E ".DS_Store" | xargs rm -rf + +.PHONY: mypycache-remove +mypycache-remove: + find . | grep -E ".mypy_cache" | xargs rm -rf + +.PHONY: ipynbcheckpoints-remove +ipynbcheckpoints-remove: + find . | grep -E ".ipynb_checkpoints" | xargs rm -rf + +.PHONY: pytestcache-remove +pytestcache-remove: + find . | grep -E ".pytest_cache" | xargs rm -rf + +.PHONY: build-remove +build-remove: + rm -rf build/ + +.PHONY: cleanup +cleanup: pycache-remove dsstore-remove mypycache-remove ipynbcheckpoints-remove pytestcache-remove diff --git a/stac_model/README.md b/stac_model/README.md new file mode 100644 index 0000000..1f37fdd --- /dev/null +++ b/stac_model/README.md @@ -0,0 +1,161 @@ +# stac-model + +
+ +[![Python support][bp1]][bp2] +[![PyPI Release][bp3]][bp2] +[![Repository][bscm1]][bp4] +[![Releases][bscm2]][bp5] +[![Docs][bdoc1]][bdoc2] + +[![Contributions Welcome][bp8]][bp9] + +[![Poetry][bp11]][bp12] +[![Pre-commit][bp15]][bp16] +[![Semantic versions][blic3]][bp5] +[![Pipelines][bscm6]][bscm7] + +_A PydanticV2 validation and serialization library for the STAC ML Model Extension_ + +
+ +## Installation + +```bash +pip install -U stac-model +``` + +or install with `Poetry`: + +```bash +poetry add stac-model +``` +Then you can run + +```bash +stac-model --help +``` + +or with `Poetry`: + +```bash +poetry run stac-model --help +``` + +## Creating an example metadata json + +``` +poetry run stac-model +``` + +This will make an example example.json metadata file for an example model. + +Currently this looks like + +``` +{ + "signatures": { + "inputs": [ + { + "name": "input_tensor", + "dtype": "float32", + "shape": [ + -1, + 13, + 64, + 64 + ] + } + ], + "outputs": [ + { + "name": "output_tensor", + "dtype": "float32", + "shape": [ + -1, + 10 + ] + } + ], + "params": null + }, + "artifact": { + "path": "s3://example/s3/uri/model.pt", + "additional_files": null + }, + "id": "3fa03dceb4004b6e8a9e8591e4b3a99d", + "class_map": { + "class_to_label_id": { + "Annual Crop": 0, + "Forest": 1, + "Herbaceous Vegetation": 2, + "Highway": 3, + "Industrial Buildings": 4, + "Pasture": 5, + "Permanent Crop": 6, + "Residential Buildings": 7, + "River": 8, + "SeaLake": 9 + } + }, + "runtime_config": null, + "name": "eurosat", + "ml_model_type": null, + "ml_model_processor_type": "cpu", + "ml_model_learning_approach": null, + "ml_model_prediction_type": null, + "ml_model_architecture": null +} +``` + +## :chart_with_upwards_trend: Releases + +You can see the list of available releases on the [GitHub Releases][r1] page. + + +[![License][blic1]][blic2] + +This project is licenced under the terms of the `Apache Software License 2.0` licence. See [LICENCE][blic2] for more details. + + +## Credits [![Python project templated from galactipy.][bp6]][bp7] + +This project was generated with [`galactipy`][bp7]. + + + +[bp1]: https://img.shields.io/pypi/pyversions/stac-model?style=for-the-badge +[bp2]: https://pypi.org/project/stac-model/ +[bp3]: https://img.shields.io/pypi/v/stac-model?style=for-the-badge&logo=pypi&color=3775a9 +[bp4]: https://github.com/stac-extensions/stac-model +[bp5]: https://github.com/stac-extensions/stac-model/releases +[bp6]: https://img.shields.io/badge/made%20with-galactipy%20%F0%9F%8C%8C-179287?style=for-the-badge&labelColor=193A3E +[bp7]: https://kutt.it/7fYqQl +[bp8]: https://img.shields.io/static/v1.svg?label=Contributions&message=Welcome&color=0059b3&style=for-the-badge +[bp9]: https://github.com/stac-extensions/stac-model/blob/main/CONTRIBUTING.md +[bp11]: https://img.shields.io/endpoint?url=https://python-poetry.org/badge/v0.json&style=for-the-badge +[bp12]: https://python-poetry.org/ + +[bp15]: https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit&logoColor=white&style=for-the-badge +[bp16]: https://github.com/stac-extensions/stac-model/blob/main/.pre-commit-config.yaml + +[blic1]: https://img.shields.io/github/license/stac-extensions/stac-model?style=for-the-badge +[blic2]: https://github.com/stac-extensions/stac-model/blob/main/LICENCE +[blic3]: https://img.shields.io/badge/%F0%9F%93%A6-semantic%20versions-4053D6?style=for-the-badge + +[r1]: https://github.com/stac-extensions/stac-model/releases + +[bscm1]: https://img.shields.io/badge/GitHub-100000?style=for-the-badge&logo=github&logoColor=white +[bscm2]: https://img.shields.io/github/v/release/stac-extensions/stac-model?style=for-the-badge&logo=semantic-release&color=347d39 +[bscm6]: https://img.shields.io/github/actions/workflow/status/stac-extensions/stac-model/build.yml?style=for-the-badge&logo=github +[bscm7]: https://github.com/stac-extensions/stac-model/actions/workflows/build.yml + +[hub1]: https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuring-dependabot-version-updates#enabling-dependabot-version-updates +[hub2]: https://github.com/marketplace/actions/close-stale-issues +[hub5]: https://github.com/stac-extensions/stac-model/blob/main/.github/workflows/build.yml +[hub6]: https://docs.github.com/en/code-security/dependabot +[hub8]: https://github.com/stac-extensions/stac-model/blob/main/.github/release-drafter.yml +[hub9]: https://github.com/stac-extensions/stac-model/blob/main/.github/.stale.yml + +[bdoc1]: https://img.shields.io/badge/docs-github%20pages-0a507a?style=for-the-badge +[bdoc2]: https://stac-extensions.github.io/stac-model diff --git a/stac_model/SECURITY.md b/stac_model/SECURITY.md new file mode 100644 index 0000000..9ca2669 --- /dev/null +++ b/stac_model/SECURITY.md @@ -0,0 +1,29 @@ +# Security + +## :closed_lock_with_key: Reporting Security Issues + +> Do not open issues that might have security implications! +> It is critical that security related issues are reported privately so we have time to address them before they become public knowledge. + +Vulnerabilities can be reported by emailing core members: + +- Ryan Avery <[ryan@wherobots.com][1]> + +Please include the requested information listed below (as much as you can provide) to help us better understand the nature and scope of the possible issue: + +- Type of issue (e.g. buffer overflow, SQL injection, cross-site scripting, etc.) +- Full paths of source file(s) related to the manifestation of the issue +- The location of the affected source code (tag/branch/commit or direct URL) +- Any special configuration required to reproduce the issue +- Environment (e.g. Linux / Windows / macOS) +- Step-by-step instructions to reproduce the issue +- Proof-of-concept or exploit code (if possible) +- Impact of the issue, including how an attacker might exploit the issue + +This information will help us triage your report more quickly. + +## Preferred Languages + +We prefer all communications to be in English. + +[1]: mailto:ryan@wherobots.com diff --git a/stac_model/docker/Dockerfile b/stac_model/docker/Dockerfile new file mode 100644 index 0000000..8c81a07 --- /dev/null +++ b/stac_model/docker/Dockerfile @@ -0,0 +1,25 @@ +FROM python:3.10-slim-buster + +ENV LANG=C.UTF-8 \ + LC_ALL=C.UTF-8 \ + PATH="${PATH}:/root/.poetry/bin" + +RUN apt-get update && \ + apt-get install -y --no-install-recommends \ + curl \ + && rm -rf /var/lib/apt/lists/* + +COPY pyproject.toml ./ + +# Install Poetry +RUN curl -sSL https://install.python-poetry.org | POETRY_HOME=/opt/poetry python && \ + cd /usr/local/bin && \ + ln -s /opt/poetry/bin/poetry && \ + poetry config virtualenvs.create false + +# Allow installing dev dependencies to run tests +ARG INSTALL_DEV=false +RUN bash -c "if [ $INSTALL_DEV == 'true' ] ; then poetry install --no-root ; else poetry install --no-root --no-dev ; fi" + +CMD mkdir -p /workspace +WORKDIR /workspace diff --git a/stac_model/docker/README.md b/stac_model/docker/README.md new file mode 100644 index 0000000..614d5b4 --- /dev/null +++ b/stac_model/docker/README.md @@ -0,0 +1,47 @@ +# Docker for stac-model + +## Installation + +To create Docker you need to run: + +```bash +make docker-build +``` + +which is equivalent to: + +```bash +make docker-build VERSION=latest +``` + +You may provide name and version for the image. +Default name is `IMAGE := stac_model`. +Default version is `VERSION := latest`. + +```bash +make docker-build IMAGE=some_name VERSION=0.1.0 +``` + +## Usage + +```bash +docker run -it --rm \ + -v $(pwd):/workspace \ + stac_model bash +``` + +## How to clean up + +To uninstall docker image run `make docker-remove` with `VERSION`: + +```bash +make docker-remove VERSION=0.1.0 +``` + +you may also choose the image name + +```bash +make docker-remove IMAGE=some_name VERSION=latest +``` + +If you want to clean all, including `build` and `pycache` run `make cleanup` diff --git a/stac_model/docs/.gitkeep b/stac_model/docs/.gitkeep new file mode 100644 index 0000000..e69de29 diff --git a/stac_model/example.json b/stac_model/example.json new file mode 100644 index 0000000..df5bc45 --- /dev/null +++ b/stac_model/example.json @@ -0,0 +1,53 @@ +{ + "signatures": { + "inputs": [ + { + "name": "input_tensor", + "dtype": "float32", + "shape": [ + -1, + 13, + 64, + 64 + ] + } + ], + "outputs": [ + { + "name": "output_tensor", + "dtype": "float32", + "shape": [ + -1, + 10 + ] + } + ], + "params": null + }, + "artifact": { + "path": "s3://example/s3/uri/model.pt", + "additional_files": null + }, + "id": "3fa03dceb4004b6e8a9e8591e4b3a99d", + "class_map": { + "class_to_label_id": { + "Annual Crop": 0, + "Forest": 1, + "Herbaceous Vegetation": 2, + "Highway": 3, + "Industrial Buildings": 4, + "Pasture": 5, + "Permanent Crop": 6, + "Residential Buildings": 7, + "River": 8, + "SeaLake": 9 + } + }, + "runtime_config": null, + "name": "eurosat", + "ml_model_type": null, + "ml_model_processor_type": "cpu", + "ml_model_learning_approach": null, + "ml_model_prediction_type": null, + "ml_model_architecture": null +} diff --git a/stac_model/model_metadata.py b/stac_model/model_metadata.py new file mode 100644 index 0000000..447f441 --- /dev/null +++ b/stac_model/model_metadata.py @@ -0,0 +1,102 @@ +from pydantic import BaseModel, Field, FilePath, AnyUrl +from typing import Optional, List, Tuple, Dict, Literal, Any +from uuid import uuid4 +import numpy as np +import re + +# Pydantic Models +class TensorSignature(BaseModel): + name: Optional[str] = None + dtype: Any = Field(...) + shape: Tuple[int, ...] | List[int] = Field(...) + +class ModelSignature(BaseModel): + inputs: List[TensorSignature] + outputs: List[TensorSignature] + params: Optional[Dict[str, int | float | str]] = None + + class Config: + arbitrary_types_allowed = True + +class RuntimeConfig(BaseModel): + environment: str + +class S3Path(AnyUrl): + allowed_schemes = {'s3'} + user_required = False + max_length = 1023 + min_length = 8 + + @classmethod + def validate_s3_url(cls, v): + if not v.startswith('s3://'): + raise ValueError('S3 path must start with s3://') + return v + + @classmethod + def validate_bucket_name(cls, v): + if not v: + raise ValueError('Bucket name cannot be empty') + return v + + @classmethod + def validate_key(cls, v): + if '//' in v: + raise ValueError('Key must not contain double slashes') + return v.strip('/') + +class ModelArtifact(BaseModel): + path: S3Path | FilePath | str = Field(...) + additional_files: Optional[Dict[str, FilePath]] = None + + class Config: + arbitrary_types_allowed = True + +class ClassMap(BaseModel): + class_to_label_id: Dict[str, int] + + @property + def label_id_to_class(self) -> Dict[int, str]: + return {v: k for k, v in self.class_to_label_id.items()} + +class ModelMetadata(BaseModel): + signatures: ModelSignature + artifact: ModelArtifact + id: str = Field(default_factory=lambda: uuid4().hex) + class_map: ClassMap + runtime_config: Optional[RuntimeConfig] = None + name: str + ml_model_type: Optional[str] = None + ml_model_processor_type: Optional[Literal["cpu", "gpu", "tpu", "mps"]] = None + ml_model_learning_approach: Optional[str] = None + ml_model_prediction_type: Optional[Literal["object-detection", "classification", "segmentation", "regression"]] = None + ml_model_architecture: Optional[str] = None + + class Config: + arbitrary_types_allowed = True + +# Functions to create, serialize, and deserialize ModelMetadata +def create_metadata(): + input_sig = TensorSignature(name='input_tensor', dtype='float32', shape=(-1, 13, 64, 64)) + output_sig = TensorSignature(name='output_tensor', dtype='float32', shape=(-1, 10)) + model_sig = ModelSignature(inputs=[input_sig], outputs=[output_sig]) + model_artifact = ModelArtifact(path="s3://example/s3/uri/model.pt") + class_map = ClassMap(class_to_label_id={ + 'Annual Crop': 0, 'Forest': 1, 'Herbaceous Vegetation': 2, 'Highway': 3, + 'Industrial Buildings': 4, 'Pasture': 5, 'Permanent Crop': 6, + 'Residential Buildings': 7, 'River': 8, 'SeaLake': 9 + }) + return ModelMetadata(name="eurosat", class_map=class_map, signatures=model_sig, artifact=model_artifact, ml_model_processor_type="cpu") + +def metadata_json(metadata: ModelMetadata) -> str: + return metadata.model_dump_json(indent=2) + +def model_metadata_json_operations(json_str: str) -> ModelMetadata: + return ModelMetadata.model_validate_json(json_str) + +# Running the functions end-to-end +metadata = create_metadata() +json_str = metadata_json(metadata) +model_metadata = model_metadata_json_operations(json_str) + +print("Model Metadata Name:", model_metadata.name) diff --git a/stac_model/poetry.lock b/stac_model/poetry.lock new file mode 100644 index 0000000..312b915 --- /dev/null +++ b/stac_model/poetry.lock @@ -0,0 +1,1355 @@ +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. + +[[package]] +name = "annotated-types" +version = "0.6.0" 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(>=7.1.2)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] +test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.4)", "pytest-env (>=0.8.2)", "pytest-freezer (>=0.4.8)", "pytest-mock (>=3.11.1)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=68)", "time-machine (>=2.10)"] + +[metadata] +lock-version = "2.0" +python-versions = "^3.10" +content-hash = "269af20479971fc8a9dac3c187aacebf049cf687e91b4806a1b27c48e48fda8d" diff --git a/stac_model/pyproject.toml b/stac_model/pyproject.toml new file mode 100644 index 0000000..f73725b --- /dev/null +++ b/stac_model/pyproject.toml @@ -0,0 +1,201 @@ + +# Poetry pyproject.toml: https://python-poetry.org/docs/pyproject/ +[build-system] +requires = ["poetry_core>=1.0.0"] +build-backend = "poetry.core.masonry.api" + + +[tool.poetry] +name = "stac-model" +version = "0.1.0" +description = "A PydanticV2 validation and serialization libary for the STAC ML Model Extension" +readme = "README.md" +authors = ["Ryan Avery "] +license = "Apache Software License 2.0" +repository = "https://github.com/rbavery/stac-model" +homepage = "https://github.com/rbavery/stac-model" +packages = [ + {include = "stac_model"} +] + + +# Keywords description https://python-poetry.org/docs/pyproject/#keywords +keywords = [] # UPDATEME with relevant keywords + + +# Pypi classifiers: https://pypi.org/classifiers/ +classifiers = [ # UPDATEME with additional classifiers; remove last classifier to allow publishing on PyPI + "Development Status :: 3 - Alpha", + "Intended Audience :: Developers", + "Operating System :: OS Independent", + "Topic :: Software Development :: Libraries :: Python Modules", + "License :: OSI Approved :: Apache Software License", + "Programming Language :: Python :: 3", + "Programming Language :: Python :: 3.10", + "Programming Language :: Python :: 3.11", +] + + +[tool.poetry.scripts] +# Entry points for the package https://python-poetry.org/docs/pyproject/#scripts +"stac-model" = "stac_model.__main__:app" + + +[tool.poetry.dependencies] +python = "^3.10" + +typer = {extras = ["all"], version = "^0.7.0"} +rich = "^12.6.0" +pydantic = "~2.3.0" # bug in post 2.3 https://github.com/pydantic/pydantic/issues/7720 +pydantic-core = "~2" +numpy = "^1.26.2" + + +[tool.poetry.group.dev.dependencies] +mypy = "^1.0.0" +mypy-extensions = "^0.4.3" +pre-commit = "^2.21.0" +bandit = "^1.7.5" +safety = "^2.3.4" + + +pydocstyle = {extras = ["toml"], version = "^6.2.0"} +pydoclint = "^0.3.0" + +pytest = "^7.2.1" +pytest-html = "^3.2.0" +pytest-cov = "^4.1.0" +pytest-mock = "^3.10.0" +pytest-timeout = "^2.2.0" +pytest-benchmark = "^4.0.0" +pytest-sugar = "^0.9.7" +pytest-click = "^1.1.0" +pytest-pikachu = "^1.0.0" +coverage = "^7.3.0" +ruff = "^0.1.7" + +[tool.ruff] +exclude = [ + ".git", + "__pycache__", + ".mypy_cache", + ".tox", + ".venv", + "_build", + "buck-out", + "build", + "dist", + "env", + "venv" +] + + +[tool.mypy] +# https://github.com/python/mypy +# https://mypy.readthedocs.io/en/latest/config_file.html#using-a-pyproject-toml-file +python_version = "3.10" +pretty = true +show_traceback = true +color_output = true + +allow_redefinition = false +check_untyped_defs = true +disallow_any_generics = true +disallow_incomplete_defs = true +ignore_missing_imports = true +implicit_reexport = false +no_implicit_optional = true +show_column_numbers = true +show_error_codes = true +show_error_context = true +strict_equality = true +strict_optional = true +warn_no_return = true +warn_redundant_casts = true +warn_return_any = true +warn_unreachable = true +warn_unused_configs = true +warn_unused_ignores = true + +plugins = [ + "pydantic.mypy" +] + + +[tool.pydantic-mypy] +init_forbid_extra = true +init_typed = true +warn_required_dynamic_aliases = true + +[tool.pydocstyle] +# https://github.com/PyCQA/pydocstyle +# http://www.pydocstyle.org/en/stable/usage.html#available-options +convention = "google" + + +[tool.pydoclint] +# https://github.com/jsh9/pydoclint +# https://jsh9.github.io/pydoclint/how_to_config.html +style = "google" +exclude = ''' +/( + \.git + | \.hg + | \.mypy_cache + | \.tox + | \.venv + | __pycache__ + | _build + | buck-out + | build + | dist + | env + | venv +)/ +''' + + +[tool.pytest.ini_options] +# https://github.com/pytest-dev/pytest +# https://docs.pytest.org/en/6.2.x/customize.html#pyproject-toml +# Directories that are not visited by pytest collector: +norecursedirs =[ + "hooks", + "*.egg", + ".eggs", + "dist", + "build", + "docs", + ".tox", + ".git", + "__pycache__" +] +doctest_optionflags = ["NUMBER", "NORMALIZE_WHITESPACE", "IGNORE_EXCEPTION_DETAIL"] +timeout = 1000 + +# Extra options: +addopts = [ + "--strict-markers", + "--tb=short", + "--doctest-modules", + "--doctest-continue-on-failure", + "--pikachu" +] + + +[tool.coverage.run] +source = ["tests"] +branch = true + + +[tool.coverage.report] +exclude_also = [ + "def main", + "if __name__ == .__main__.:" +] +fail_under = 50 +show_missing = true + + +[tool.coverage.paths] +source = ["stac_model"] diff --git a/stac_model/requirements.txt b/stac_model/requirements.txt new file mode 100644 index 0000000..6613a77 --- /dev/null +++ b/stac_model/requirements.txt @@ -0,0 +1,12 @@ +annotated-types==0.6.0 ; python_version >= "3.10" and python_version < "4.0" +click==8.1.7 ; python_version >= "3.10" and python_version < "4.0" +colorama==0.4.6 ; python_version >= "3.10" and python_version < "4.0" +commonmark==0.9.1 ; python_version >= "3.10" and python_version < "4.0" +numpy==1.26.2 ; python_version >= "3.10" and python_version < "4.0" +pydantic-core==2.6.3 ; python_version >= "3.10" and python_version < "4.0" +pydantic==2.3.0 ; python_version >= "3.10" and python_version < "4.0" +pygments==2.17.2 ; python_version >= "3.10" and python_version < "4.0" +rich==12.6.0 ; python_version >= "3.10" and python_version < "4.0" +shellingham==1.5.4 ; python_version >= "3.10" and python_version < "4.0" +typer[all]==0.7.0 ; python_version >= "3.10" and python_version < "4.0" +typing-extensions==4.9.0 ; python_version >= "3.10" and python_version < "4.0" diff --git a/stac_model/stac_model/__init__.py b/stac_model/stac_model/__init__.py new file mode 100644 index 0000000..5ed00f2 --- /dev/null +++ b/stac_model/stac_model/__init__.py @@ -0,0 +1,8 @@ +"""A PydanticV2 validation and serialization library for the STAC ML Model Extension""" + +from importlib import metadata + +try: + __version__ = metadata.version("stac-model") +except metadata.PackageNotFoundError: + __version__ = "unknown" diff --git a/stac_model/stac_model/__main__.py b/stac_model/stac_model/__main__.py new file mode 100644 index 0000000..5032827 --- /dev/null +++ b/stac_model/stac_model/__main__.py @@ -0,0 +1,69 @@ +import typer +from rich.console import Console + +from stac_model import __version__ +from stac_model.schema import * + + +app = typer.Typer( + name="stac-model", + help="A PydanticV2 validation and serialization libary for the STAC ML Model Extension", + add_completion=False, +) +console = Console() + + +def version_callback(print_version: bool) -> None: + """Print the version of the package.""" + if print_version: + console.print(f"[yellow]stac-model[/] version: [bold blue]{__version__}[/]") + raise typer.Exit() + + +@app.command(name="") +def main( + print_version: bool = typer.Option( + None, + "-v", + "--version", + callback=version_callback, + is_eager=True, + help="Prints the version of the stac-model package.", + ), +) -> None: + """Generate example spec.""" + + input_sig = TensorSignature( + name="input_tensor", dtype="float32", shape=(-1, 13, 64, 64) + ) + output_sig = TensorSignature(name="output_tensor", dtype="float32", shape=(-1, 10)) + model_sig = ModelSignature(inputs=[input_sig], outputs=[output_sig]) + model_artifact = ModelArtifact(path="s3://example/s3/uri/model.pt") + class_map = ClassMap( + class_to_label_id={ + "Annual Crop": 0, + "Forest": 1, + "Herbaceous Vegetation": 2, + "Highway": 3, + "Industrial Buildings": 4, + "Pasture": 5, + "Permanent Crop": 6, + "Residential Buildings": 7, + "River": 8, + "SeaLake": 9, + } + ) + meta = ModelMetadata( + name="eurosat", + class_map=class_map, + signatures=model_sig, + artifact=model_artifact, + ml_model_processor_type="cpu", + ) + json_str = meta.model_dump_json(indent=2) + with open("example.json", "w") as file: + file.write(json_str) + print(meta) + +if __name__ == "__main__": + app() diff --git a/stac_model/stac_model/schema.py b/stac_model/stac_model/schema.py new file mode 100644 index 0000000..e183bc7 --- /dev/null +++ b/stac_model/stac_model/schema.py @@ -0,0 +1,192 @@ +from pydantic import ( + BaseModel, + Field, + FilePath, + field_validator, + field_serializer, + AnyUrl, + ConfigDict, +) +from typing import Optional +import re +from typing import List, Tuple, Dict, Optional, Literal, Any +import numpy as np +from uuid import uuid4 +# import numpy.typing as npt + + +class TensorSignature(BaseModel): + """Tensor metadata, including the dtype (int8, float32, etc) and the tensor shape.""" + + name: Optional[str] = None + # TODO there's a couple of issues blocking numpy typing with + # pydantic or I'm not familiar enough with custom validators + # https://github.com/numpy/numpy/issues/25206 + # dtype: npt.DTypeLike = Field(...) + dtype: str = Field(...) + shape: Tuple[int, ...] | List[int] = Field(...) + model_config = ConfigDict(arbitrary_types_allowed=True) + + # TODO can't take numpy types for now until new pydant 2.6 + # # NotImplementedError: Cannot check isinstance when validating from json, use a JsonOrPython validator instead. + # @field_serializer('dtype') + # def serialize_ndtype(self, dtype: np.dtype) -> str: + # return dtype.name + # @field_validator('dtype', mode="before") + # @classmethod + # def convert_dtype(cls, v): + # if isinstance(v, str): + # v = np.dtype(v) + # elif not isinstance(v, np.dtype): + # raise ValueError(f'Expected np.dtype, received {type(v).__name__}') + # return v + + # @field_validator('shape') + # @classmethod + # def validate_shape(cls, v): + # if not isinstance(v, (tuple, list)): + # raise ValueError(f'Expected tuple or list for shape, received {type(v).__name__}') + # return list(v) + + +class ModelSignature(BaseModel): + """The name of the input tensor and accompanying tensor metadata.""" + + inputs: List[TensorSignature] + outputs: List[TensorSignature] + params: Optional[ + Dict[str, int | float | str] + ] = None # Or any other type that 'params' might take + + class Config: + arbitrary_types_allowed = True + + @property + def inputs_length(self) -> int: + return len(self.inputs) + + @property + def outputs_length(self) -> int: + return len(self.outputs) + + +class RuntimeConfig(BaseModel): + """TODO decide how to handle model runtime configurations. dependencies and hyperparams""" + + environment: str + + +class S3Path(AnyUrl): + allowed_schemes = {"s3"} + user_required = False + max_length = 1023 + min_length = 8 + + @field_validator("url") + @classmethod + def validate_s3_url(cls, v): + if not v.startswith("s3://"): + raise ValueError("S3 path must start with s3://") + if len(v) < cls.min_length: + raise ValueError("S3 path is too short") + if len(v) > cls.max_length: + raise ValueError("S3 path is too long") + return v + + @field_validator("host") + @classmethod + def validate_bucket_name(cls, v): + if not v: + raise ValueError("Bucket name cannot be empty") + if not 3 <= len(v) <= 63: + raise ValueError("Bucket name must be between 3 and 63 characters") + if not re.match(r"^[a-z0-9.\-]+$", v): + raise ValueError( + "Bucket name can only contain lowercase letters, numbers, dots, and hyphens" + ) + if v.startswith("-") or v.endswith("-"): + raise ValueError("Bucket name cannot start or end with a hyphen") + if ".." in v: + raise ValueError("Bucket name cannot have consecutive periods") + return v + + @field_validator("path") + @classmethod + def validate_key(cls, v): + if "//" in v: + raise ValueError("Key must not contain double slashes") + if "\\" in v: + raise ValueError("Backslashes are not standard in S3 paths") + if "\t" in v or "\n" in v: + raise ValueError("Key cannot contain tab or newline characters") + return v.strip("/") + + +class ModelArtifact(BaseModel): + """Information about the model location and other additional file locations.""" + + path: S3Path | FilePath | str = Field(...) + additional_files: Optional[Dict[str, FilePath]] = None + + class Config: + arbitrary_types_allowed = True + + @field_validator("path") + @classmethod + def check_path_type(cls, v): + if isinstance(v, str): + if v.startswith("s3://"): + v = S3Path(url=v) + else: + v = FilePath(f=v) + else: + raise ValueError( + f"Expected str, S3Path, or FilePath input, received {type(v).__name__}" + ) + return v + + +class ClassMap(BaseModel): + class_to_label_id: Dict[str, int] + + # Property to reverse the mapping + @property + def label_id_to_class(self) -> Dict[int, str]: + # Reverse the mapping + return {v: k for k, v in self.class_to_label_id.items()} + + def get_class(self, class_id: int) -> str: + """Get class name from class id.""" + if class_id not in self.label_id_to_class: + raise ValueError(f"Class ID '{class_id}' not found") + return self.label_id_to_class[class_id] + + def get_label_id(self, class_name: str) -> int: + """Get class id from class name.""" + if class_name not in self.class_to_label_id: + raise ValueError(f"Class name '{class_name}' not found") + return self.class_to_label_id[class_name] + + +class ModelMetadata(BaseModel): + signatures: ModelSignature + artifact: ModelArtifact + id: str = Field(default_factory=lambda: uuid4().hex) + class_map: ClassMap + + # Runtime configurations required to run the model. + # TODO requirements.txt , conda.yml, or lock files for each should be supported in future. + runtime_config: Optional[RuntimeConfig] = None + + # the name of the model + name: str + ml_model_type: Optional[str] = None + ml_model_processor_type: Optional[Literal["cpu", "gpu", "tpu", "mps"]] = None + ml_model_learning_approach: Optional[str] = None + ml_model_prediction_type: Optional[ + Literal["object-detection", "classification", "segmentation", "regression"] + ] = None + ml_model_architecture: Optional[str] = None + + class Config: + arbitrary_types_allowed = True diff --git a/stac_model/tests/test_schema.py b/stac_model/tests/test_schema.py new file mode 100644 index 0000000..b23bfdc --- /dev/null +++ b/stac_model/tests/test_schema.py @@ -0,0 +1,68 @@ +import pytest +from stac_model.schema import ( + TensorSignature, + ModelSignature, + ModelArtifact, + ClassMap, + ModelMetadata, +) +import os +import tempfile + + +def create_metadata(): + input_sig = TensorSignature( + name="input_tensor", dtype="float32", shape=(-1, 13, 64, 64) + ) + output_sig = TensorSignature(name="output_tensor", dtype="float32", shape=(-1, 10)) + model_sig = ModelSignature(inputs=[input_sig], outputs=[output_sig]) + model_artifact = ModelArtifact(path="s3://example/s3/uri/model.pt") + class_map = ClassMap( + class_to_label_id={ + "Annual Crop": 0, + "Forest": 1, + "Herbaceous Vegetation": 2, + "Highway": 3, + "Industrial Buildings": 4, + "Pasture": 5, + "Permanent Crop": 6, + "Residential Buildings": 7, + "River": 8, + "SeaLake": 9, + } + ) + return ModelMetadata( + name="eurosat", + class_map=class_map, + signatures=model_sig, + artifact=model_artifact, + ml_model_processor_type="cpu", + ) + + +@pytest.fixture +def metadata_json(): + model_metadata = create_metadata() + return model_metadata.model_dump_json(indent=2) + + +def test_model_metadata_json_operations(metadata_json): + # Use a temporary directory + with tempfile.TemporaryDirectory() as temp_dir: + temp_filepath = os.path.join(temp_dir, "tempfile.json") + + # Write to the file + with open(temp_filepath, "w") as file: + file.write(metadata_json) + + # Read and validate the model metadata from the JSON file + with open(temp_filepath, "r") as json_file: + json_str = json_file.read() + model_metadata = ModelMetadata.model_validate_json(json_str) + + assert model_metadata.name == "eurosat" + + +def test_benchmark_model_metadata_validation(benchmark): + json_str = create_metadata().model_dump_json(indent=2) + benchmark(ModelMetadata.model_validate_json, json_str)